Lag0002379 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0002379
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	beta-mannosyltransferase 4-like
Location	chr4: 42281133 .. 42283300 (-)
RNA-Seq Expression	Lag0002379
Synteny	Lag0002379

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTTCCTTCTTCTTCTGCCATGGGTTTTGAGGTTCAAGTTACAGGCATTAGCTGAATCAGAAAGGCAACCTAGTTATGCTATGAAATTTGTTTTCAAATTAATATAAACTAAACTAATATAAAGAAAAATCTTGCACCATTTCAAACTACACAAAAAAGAGAAATGATGTGGCAATGGTTTTTTTTTTTGTTTTAAAAAAAAATCAATTAGATTGAATATTAACATATCACATTATATACGGACTAATCATTTTATTCTTATAGTAGATTAAATTGTTTATATTATTCTTTAAATGTTATTTTTAAGTTATTTAAAAGAAAGTAAATCACGAGCCAAAGATAGAGTATTATAGAAATAATTATGAGTATTCATGAACACTACTACAGTTTTGACATTTTATATCACATTTTATCACACCATGGACAAATCAAATATTGGGAAAATGAAAAAAAAGTTTCAATAACGGAAAATCATAGGGTTATGTTGTGAAAATAATAATAATAATAATAAATAATAGAGTTACGTTGCTCGCATAAAAAACCCGGTTCGACCCCGGCCGAACGCCGTTTGGGGTTGTCCAACCCGCTATAAATTGGGGAACCCAAAAAACCTCACGCTGTCACTCTCTCGAACATTTCAATTCACAGAACGCAAATGGCTATGCGATCGGTGGTCGGTCGTCCTCGCTGACTCCGTCGACTGTGCGTACGGCCGCCGGTGGTGAATTCCGATTCCTCTCCGACGGCAAAGGTCGGGTTCTCAGTGAGGAGGAGCGTGCTGCGGAGAACGTCTACATCCAGGTTGAATTATTAGTTTCAAATGTCAGAAAAATGAGTTGAAACTAGTTACAAAAATGGAGTGATATACCCTTTTTTTGTTACTTCTATAAAAAACCCTTCTTCCTTCTCTAGCCGTGTAGCTGCCCCCCTCCCGCCCTAAAAGTATTATGCATTCTGCCTTATATCTAATGTCTTCATATGCTTGGCTTTTGAAGCTCATTGCCACATTTAACTTACATGGGTTCGTGATTATTTTTCTGAGTATTAGGTCTTATTTTTTGTGTATCTATTAATTAGTGTGACATTCAAGTTGATATATATGAATTTTAGTTTGTCAGCAGAGCGGTGAATCATGAGAGTCGGCTACTAATGTCTGAATAATAATTACTTTTCGGGGTTTTGCATTTAGTTTGGACTTGGTTTAGTTTCGTACTTCTTTGAAGTATTTATGTGAAAAGAAAGAGAGCTTCAGGAATTGAGTCCTCCGTAGCAACTGCCGAATTTTCCCCTAGGATTTCTTCAAAATCTTTTCTTCTCTCGTAATTGCAGGAGTTTATACAATTGAAATGGTGCCTTGACGTCGATGAAAAGTTGATAGAAAGAATATTTTGATAAGACCATAATTTTTATTGGTGTAAATTCTTCAAAAAACAGTGCTGTCTGTTCTTCTTGCCAATACGAATAAAGAAAGGATTTTAATAGTTTTGGATTTTTGAATCTTATGTTTTTTGTTCATGGCATAACATTAGCATAGTCTAAACCTGTCCTGCAATAATTTTATCATGTTGATCTCATAACTTGGAGTGGGATTGATGTTTGGTATCATTTAACATCTTGATAAAAACCCCACAAAATTTCACCCTTTTGATCTGGAAAACTTTTTTGAGTGAAAAAGAGAATAGAAATCAGATATGATTTGAAATCTTGTTACTTTGAATGATACAATAAAGGAATTCAATTCCTCTTAATTCCTTTGAAGACAAACAACATTAGACATTAGAGTATATGAAAATTTTCTTTCAGATTTATTAATTAGTGAACGATCCTGTAGTCTGTTATCTGTTTGTCAATAATTAATTGAAAATGTGCTTTCATATCTGCTCTATCCAAACCCCAGTTCAGGGACTTAGTTTTCATAATCTTACTCGTGAATGGATATTAATTATTTAAGCTAAATGGTTAATTATCAAATAAGAATTAGAAGTGCCTAATTTGTTTTTAGCATTCGTTATTTGCAAATTATAATAACATGGTCTGTTCTTGTACTAGACTTTTGCTATCAAGCACTGAAGAACTTTGCCTTGCTGGCCGCAATTCAGAAGAGTTGTTGCAAATGTCGATAAACCTATTCATTGCAAAGCGTAACCAAATTTGCTGCATTTGA

mRNA sequence

ATGAGCTTCCTTCTTCTTCTGCCATGGGTTTTGAGGTTCAAGTTACAGGCATTAGCTGAATCAGAAAGGCAACCTAGTTATGCTATGAAATTTAACGCAAATGGCTATGCGATCGGTGGTCGGTCGTCCTCGCTGACTCCGTCGACTGTGCGTACGGCCGCCGGTGGTGAATTCCGATTCCTCTCCGACGGCAAAGGTCGGGTTCTCAGTGAGGAGGAGCGTGCTGCGGAGAACGTCTACATCCAGCTCATTGCCACATTTAACTTACATGGACTTTTGCTATCAAGCACTGAAGAACTTTGCCTTGCTGGCCGCAATTCAGAAGAGTTGTTGCAAATGTCGATAAACCTATTCATTGCAAAGCGTAACCAAATTTGCTGCATTTGA

Coding sequence (CDS)

ATGAGCTTCCTTCTTCTTCTGCCATGGGTTTTGAGGTTCAAGTTACAGGCATTAGCTGAATCAGAAAGGCAACCTAGTTATGCTATGAAATTTAACGCAAATGGCTATGCGATCGGTGGTCGGTCGTCCTCGCTGACTCCGTCGACTGTGCGTACGGCCGCCGGTGGTGAATTCCGATTCCTCTCCGACGGCAAAGGTCGGGTTCTCAGTGAGGAGGAGCGTGCTGCGGAGAACGTCTACATCCAGCTCATTGCCACATTTAACTTACATGGACTTTTGCTATCAAGCACTGAAGAACTTTGCCTTGCTGGCCGCAATTCAGAAGAGTTGTTGCAAATGTCGATAAACCTATTCATTGCAAAGCGTAACCAAATTTGCTGCATTTGA

Protein sequence

MSFLLLLPWVLRFKLQALAESERQPSYAMKFNANGYAIGGRSSSLTPSTVRTAAGGEFRFLSDGKGRVLSEEERAAENVYIQLIATFNLHGLLLSSTEELCLAGRNSEELLQMSINLFIAKRNQICCI

Homology

[Close]

BLAST of Lag0002379 vs. NCBI nr
Match: XP_022961415.1 (uncharacterized protein LOC111461995 [Cucurbita moschata] >KAG6602251.1 hypothetical protein SDJN03_07484, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 73.2 bits (178), Expect = 1.9e-09
Identity = 40/57 (70.18%), Postives = 43/57 (75.44%), Query Frame = 0


Query: 43  SSLTPSTVRTAAGGEFRFLSDGKGRVLSEEERAAENVYIQLIATFNLHGLLLSSTEE 100
           SSLTPSTVRTA  G FRFLSDGKGRVLSEEERAAENVYIQ +    L    L + +E
Sbjct: 10  SSLTPSTVRTAGVGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKQRLKAEKE 66

[Close]

BLAST of Lag0002379 vs. NCBI nr
Match: KAG7032930.1 (hypothetical protein SDJN02_06981, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 73.2 bits (178), Expect = 1.9e-09
Identity = 40/57 (70.18%), Postives = 43/57 (75.44%), Query Frame = 0


Query: 43  SSLTPSTVRTAAGGEFRFLSDGKGRVLSEEERAAENVYIQLIATFNLHGLLLSSTEE 100
           SSLTPSTVRTA  G FRFLSDGKGRVLSEEERAAENVYIQ +    L    L + +E
Sbjct: 10  SSLTPSTVRTAGVGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKQRLKAEKE 66

[Close]

BLAST of Lag0002379 vs. NCBI nr
Match: XP_008456607.1 (PREDICTED: uncharacterized protein LOC103496516 [Cucumis melo])

HSP 1 Score: 71.2 bits (173), Expect = 7.1e-09
Identity = 38/57 (66.67%), Postives = 41/57 (71.93%), Query Frame = 0


Query: 43  SSLTPSTVRTAAGGEFRFLSDGKGRVLSEEERAAENVYIQLIATFNLHGLLLSSTEE 100
           SSLTP T R A  G FRFLSDGKGRVLSEEERAAENVYIQ +    L  L L + +E
Sbjct: 10  SSLTPCTARAAGAGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKLRLKAEKE 66

[Close]

BLAST of Lag0002379 vs. NCBI nr
Match: XP_022990504.1 (uncharacterized protein LOC111487345 [Cucurbita maxima] >XP_023523530.1 uncharacterized protein LOC111787725 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 71.2 bits (173), Expect = 7.1e-09
Identity = 39/57 (68.42%), Postives = 42/57 (73.68%), Query Frame = 0


Query: 43  SSLTPSTVRTAAGGEFRFLSDGKGRVLSEEERAAENVYIQLIATFNLHGLLLSSTEE 100
           SSLTPSTVR A  G FRFLSDGKGRVLSEEERAAENVYIQ +    L    L + +E
Sbjct: 10  SSLTPSTVRAAGVGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKQRLKAEKE 66

[Close]

BLAST of Lag0002379 vs. NCBI nr
Match: TYK11773.1 (putative uncharacterized transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 71.2 bits (173), Expect = 7.1e-09
Identity = 38/57 (66.67%), Postives = 41/57 (71.93%), Query Frame = 0


Query: 43  SSLTPSTVRTAAGGEFRFLSDGKGRVLSEEERAAENVYIQLIATFNLHGLLLSSTEE 100
           SSLTP T R A  G FRFLSDGKGRVLSEEERAAENVYIQ +    L  L L + +E
Sbjct: 10  SSLTPCTARAAGAGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKLRLKAEKE 66

The following BLAST results are available for this feature:

BLAST of Lag0002379 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961415.1	1.9e-09	70.18	uncharacterized protein LOC111461995 [Cucurbita moschata] >KAG6602251.1 hypothet...	[more]
KAG7032930.1	1.9e-09	70.18	hypothetical protein SDJN02_06981, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_008456607.1	7.1e-09	66.67	PREDICTED: uncharacterized protein LOC103496516 [Cucumis melo]	[more]
XP_022990504.1	7.1e-09	68.42	uncharacterized protein LOC111487345 [Cucurbita maxima] >XP_023523530.1 uncharac...	[more]
TYK11773.1	7.1e-09	66.67	putative uncharacterized transmembrane protein [Cucumis melo var. makuwa]	[more]

BLAST of Lag0002379 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0002379.1	Lag0002379.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032780	negative regulation of ATP-dependent activity
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
molecular_function	GO:0042030	ATPase inhibitor activity
molecular_function	GO:0016757	glycosyltransferase activity