
Lag0001625 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAATAACTCCACAGGCCAAAGCAATGAAACTCACAAAGATCTCGACCTGCAGCTATCTCTCCGGCCACCGGCCTGCGCTGCCTACAGCGGCAGGGCGAGTTCCCTGACCTCGATGAGGGTCACTCGCAGCTTCGGAAATCGCCGACGGTCTCTCCGCTGCTGCAATTCCCAACTGACGACGATGACGATCCCCCCGCCGTATCCGTGGTCGACAAACCACCGAGCGGTCGTCCACACCCTGAACCACCTGAGATCAAATCAAATCCTGACGGTCACGGGCGACGTCCGGTGCCGGCGGTGCCAGAGACAGTACGAGATCGTATACGACGTCGTGTCGAAGTTCGAGGAGATTGCGAGCTTCGTGGAGAAGAACAAGGATTCATTTCACGACCGAGCGCCGAGCTCATGGATGAACCCTAATTTTCCGACGTGTAGATTTTGCGGTCTTGAAAACGGATCGAGGCCAGTGATCCCGGAGGAAATGAGAAGGATCAATTGGCTGTTCTTGCTTTTGGGACAAATGCTTGGATATTTGAACCTTAATCATCTGAAATACTTCTGCAGTTACACTAAAAATCATCGTACGGGTGCTAAGAATCGGCTTCTTTATCTCACTTATCTCACTTTGTGCCACCAAGTTGATCCCTCCGGCCGTTTCCGGCGCTGA ATGGAGAATAACTCCACAGGCCAAAGCAATGAAACTCACAAAGATCTCGACCTGCAGCTATCTCTCCGGCCACCGGCCTGCGCTGCCTACAGCGGCAGGGCGAGTTCCCTGACCTCGATGAGGGTCACTCGCAGCTTCGGAAATCGCCGACGGTCTCTCCGCTGCTGCAATTCCCAACTGACGACGATGACGATCCCCCCGCCGTATCCGTGGTCGACAAACCACCGAGCGGTCGTCCACACCCTGAACCACCTGAGATCAAATCAAATCCTGACGGTCACGGGCGACGTCCGGTGCCGGCGGTGCCAGAGACAGTACGAGATCGTATACGACGTCGTGTCGAAGTTCGAGGAGATTGCGAGCTTCGTGGAGAAGAACAAGGATTCATTTCACGACCGAGCGCCGAGCTCATGGATGAACCCTAATTTTCCGACGTGTAGATTTTGCGGTCTTGAAAACGGATCGAGGCCAGTGATCCCGGAGGAAATGAGAAGGATCAATTGGCTGTTCTTGCTTTTGGGACAAATGCTTGGATATTTGAACCTTAATCATCTGAAATACTTCTGCAGTTACACTAAAAATCATCGTACGGGTGCTAAGAATCGGCTTCTTTATCTCACTTATCTCACTTTGTGCCACCAAGTTGATCCCTCCGGCCGTTTCCGGCGCTGA ATGGAGAATAACTCCACAGGCCAAAGCAATGAAACTCACAAAGATCTCGACCTGCAGCTATCTCTCCGGCCACCGGCCTGCGCTGCCTACAGCGGCAGGGCGAGTTCCCTGACCTCGATGAGGGTCACTCGCAGCTTCGGAAATCGCCGACGGTCTCTCCGCTGCTGCAATTCCCAACTGACGACGATGACGATCCCCCCGCCGTATCCGTGGTCGACAAACCACCGAGCGGTCGTCCACACCCTGAACCACCTGAGATCAAATCAAATCCTGACGGTCACGGGCGACGTCCGGTGCCGGCGGTGCCAGAGACAGTACGAGATCGTATACGACGTCGTGTCGAAGTTCGAGGAGATTGCGAGCTTCGTGGAGAAGAACAAGGATTCATTTCACGACCGAGCGCCGAGCTCATGGATGAACCCTAATTTTCCGACGTGTAGATTTTGCGGTCTTGAAAACGGATCGAGGCCAGTGATCCCGGAGGAAATGAGAAGGATCAATTGGCTGTTCTTGCTTTTGGGACAAATGCTTGGATATTTGAACCTTAATCATCTGAAATACTTCTGCAGTTACACTAAAAATCATCGTACGGGTGCTAAGAATCGGCTTCTTTATCTCACTTATCTCACTTTGTGCCACCAAGTTGATCCCTCCGGCCGTTTCCGGCGCTGA MENNSTGQSNETHKDLDLQLSLRPPACAAYSGRASSLTSMRVTRSFGNRRRSLRCCNSQLTTMTIPPPYPWSTNHRAVVHTLNHLRSNQILTVTGDVRCRRCQRQYEIVYDVVSKFEEIASFVEKNKDSFHDRAPSSWMNPNFPTCRFCGLENGSRPVIPEEMRRINWLFLLLGQMLGYLNLNHLKYFCSYTKNHRTGAKNRLLYLTYLTLCHQVDPSGRFRR Homology
BLAST of Lag0001625 vs. NCBI nr
Match: XP_008447299.1 (PREDICTED: uncharacterized protein LOC103489770 [Cucumis melo]) HSP 1 Score: 327.0 bits (837), Expect = 1.3e-85 Identity = 160/223 (71.75%), Postives = 183/223 (82.06%), Query Frame = 0
BLAST of Lag0001625 vs. NCBI nr
Match: XP_011659748.1 (uncharacterized protein LOC105436256 [Cucumis sativus] >KGN44335.1 hypothetical protein Csa_015666 [Cucumis sativus]) HSP 1 Score: 320.9 bits (821), Expect = 9.0e-84 Identity = 158/227 (69.60%), Postives = 181/227 (79.74%), Query Frame = 0
BLAST of Lag0001625 vs. NCBI nr
Match: KAA0036575.1 (uncharacterized protein E6C27_scaffold191G00850 [Cucumis melo var. makuwa] >TYK22646.1 uncharacterized protein E5676_scaffold195G00840 [Cucumis melo var. makuwa]) HSP 1 Score: 293.9 bits (751), Expect = 1.2e-75 Identity = 146/207 (70.53%), Postives = 168/207 (81.16%), Query Frame = 0
BLAST of Lag0001625 vs. NCBI nr
Match: XP_022952797.1 (uncharacterized protein LOC111455388 [Cucurbita moschata]) HSP 1 Score: 270.8 bits (691), Expect = 1.1e-68 Identity = 132/222 (59.46%), Postives = 164/222 (73.87%), Query Frame = 0
BLAST of Lag0001625 vs. NCBI nr
Match: XP_022972401.1 (uncharacterized protein LOC111470968 [Cucurbita maxima]) HSP 1 Score: 267.7 bits (683), Expect = 9.0e-68 Identity = 129/200 (64.50%), Postives = 155/200 (77.50%), Query Frame = 0
BLAST of Lag0001625 vs. ExPASy TrEMBL
Match: A0A1S3BHR1 (uncharacterized protein LOC103489770 OS=Cucumis melo OX=3656 GN=LOC103489770 PE=4 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 6.1e-86 Identity = 160/223 (71.75%), Postives = 183/223 (82.06%), Query Frame = 0
BLAST of Lag0001625 vs. ExPASy TrEMBL
Match: A0A0A0K3Q8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G259350 PE=4 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 4.3e-84 Identity = 158/227 (69.60%), Postives = 181/227 (79.74%), Query Frame = 0
BLAST of Lag0001625 vs. ExPASy TrEMBL
Match: A0A5A7T547 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00840 PE=4 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 5.7e-76 Identity = 146/207 (70.53%), Postives = 168/207 (81.16%), Query Frame = 0
BLAST of Lag0001625 vs. ExPASy TrEMBL
Match: A0A6J1GLD4 (uncharacterized protein LOC111455388 OS=Cucurbita moschata OX=3662 GN=LOC111455388 PE=4 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 5.1e-69 Identity = 132/222 (59.46%), Postives = 164/222 (73.87%), Query Frame = 0
BLAST of Lag0001625 vs. ExPASy TrEMBL
Match: A0A6J1I5V9 (uncharacterized protein LOC111470968 OS=Cucurbita maxima OX=3661 GN=LOC111470968 PE=4 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 4.4e-68 Identity = 129/200 (64.50%), Postives = 155/200 (77.50%), Query Frame = 0
BLAST of Lag0001625 vs. TAIR 10
Match: AT1G49330.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 172.6 bits (436), Expect = 3.7e-43 Identity = 75/154 (48.70%), Postives = 100/154 (64.94%), Query Frame = 0
BLAST of Lag0001625 vs. TAIR 10
Match: AT2G16190.1 (BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1); Has 77 Blast hits to 77 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 13; Plants - 56; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 157.1 bits (396), Expect = 1.6e-38 Identity = 72/174 (41.38%), Postives = 100/174 (57.47%), Query Frame = 0
BLAST of Lag0001625 vs. TAIR 10
Match: AT2G16190.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 108.6 bits (270), Expect = 6.5e-24 Identity = 56/150 (37.33%), Postives = 77/150 (51.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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