Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCAGATCGTGAAGAGGAAGAAGAAAGGGAGACCATCGAAGGCAGATCTGGCACGGCGGTCCAGCGGAGGACTGGCATCGTCGGAATCTGAACCGCGGCGGAGCCTCCGCCGGCGGAATGTGAGGTACAACATCGATTATGACGACTTTCTTGAAGAAGACGACGAGGATGAGGAAGAAGAGGAGAGGAGGAGAGAGAAGAAGCTGAAGCTTGTCGTGAAGCTGAACCAGGGCAGAGATGGAGATGGAGGGCATCAGTCGCCAGTGGCCGGAATTTCTAGGTCAGAGGCGCGTGGTGGACACGCGTCGGAGTACGGTTCGTCGGCGTCGGAAGGGGAAGATGAGCCCGAGAGGAAGCCATTGAAGAAGAGGAGGATTGGCGGCGGTGAAGAAGAGGATGAAGATGAAGATTACGATGATCAAATTCGTGGAGATGAAAATGAAGACGATGACATTGATGAGGTACTTAACAACAACAGCGCTGTGGATCTGATGGAAGAGGGAAATAAACAAAAAAATGATTAACAAAGAGAGGTTTGAGGAACATGAGTGAGTGAGACAGAGTGGGATTTGGGAAGTGTATGTATGTATGCTTTAACAGAGAGAGGAGTGTCCAGCTCAGCTGAGATCACTGAGATTTTTATGCAATTGGTCCAGACTTCAAAATTACTCTTACCCCTTTTCCATTTCTCAAATTTCCGTTTCACTTTCTCTCTCTCTAGGTCTTTGGAATGTGTCGGGGATTTGAGAGGTATTAAGGATTTTGAGGTCAACTGTCAAAAACTAACACCCCTCCTCCTCTGTTCCCGGCCGGAAAATGAGGAGGAGGGAGGCCCCTCCTCCCTCCCTTTTCTATTTTTTTTTTAAAAAAAAACATTGAAGAAAAAGAAGAGAAGAAGAAAGAAAGGAAGAAGAAGAAAGAAGAAAGAAGAAAAAAAAAAAAATTCAGTCGCCGGCGGCGGCGGCGTGTGGTGGTCGCCGGTCGCCGGACTTAGGAAGAAGAAGAAGGAGAAGGGAGAAGATGGAGAAGAAGGAAGATGGAGAAGAAGAAGATGAGAGAGAAGGAGAGAAAGAATAA
mRNA sequence
ATGGGTCAGATCGTGAAGAGGAAGAAGAAAGGGAGACCATCGAAGGCAGATCTGGCACGGCGGTCCAGCGGAGGACTGGCATCGTCGGAATCTGAACCGCGGCGGAGCCTCCGCCGGCGGAATGTGAGGTACAACATCGATTATGACGACTTTCTTGAAGAAGACGACGAGGATGAGGAAGAAGAGGAGAGGAGGAGAGAGAAGAAGCTGAAGCTTGTCGTGAAGCTGAACCAGGGCAGAGATGGAGATGGAGGGCATCAGTCGCCAGTGGCCGGAATTTCTAGGTCAGAGGCGCGTGGTGGACACGCGTCGGAGTACGGTTCGTCGGCGTCGGAAGGGGAAGATGAGCCCGAGAGGAAGCCATTGAAGAAGAGGAGGATTGGCGGCGGTGAAGAAGAGGATGAAGATGAAGATTACGATGATCAAATTCGTGGAGATGAAAATGAAGACGATGACATTGATGAGTCGCCGGCGGCGGCGGCGTGTGGTGGTCGCCGGTCGCCGGACTTAGGAAGAAGAAGAAGGAGAAGGGAGAAGATGGAGAAGAAGGAAGATGGAGAAGAAGAAGATGAGAGAGAAGGAGAGAAAGAATAA
Coding sequence (CDS)
ATGGGTCAGATCGTGAAGAGGAAGAAGAAAGGGAGACCATCGAAGGCAGATCTGGCACGGCGGTCCAGCGGAGGACTGGCATCGTCGGAATCTGAACCGCGGCGGAGCCTCCGCCGGCGGAATGTGAGGTACAACATCGATTATGACGACTTTCTTGAAGAAGACGACGAGGATGAGGAAGAAGAGGAGAGGAGGAGAGAGAAGAAGCTGAAGCTTGTCGTGAAGCTGAACCAGGGCAGAGATGGAGATGGAGGGCATCAGTCGCCAGTGGCCGGAATTTCTAGGTCAGAGGCGCGTGGTGGACACGCGTCGGAGTACGGTTCGTCGGCGTCGGAAGGGGAAGATGAGCCCGAGAGGAAGCCATTGAAGAAGAGGAGGATTGGCGGCGGTGAAGAAGAGGATGAAGATGAAGATTACGATGATCAAATTCGTGGAGATGAAAATGAAGACGATGACATTGATGAGTCGCCGGCGGCGGCGGCGTGTGGTGGTCGCCGGTCGCCGGACTTAGGAAGAAGAAGAAGGAGAAGGGAGAAGATGGAGAAGAAGGAAGATGGAGAAGAAGAAGATGAGAGAGAAGGAGAGAAAGAATAA
Protein sequence
MGQIVKRKKKGRPSKADLARRSSGGLASSESEPRRSLRRRNVRYNIDYDDFLEEDDEDEEEEERRREKKLKLVVKLNQGRDGDGGHQSPVAGISRSEARGGHASEYGSSASEGEDEPERKPLKKRRIGGGEEEDEDEDYDDQIRGDENEDDDIDESPAAAACGGRRSPDLGRRRRRREKMEKKEDGEEEDEREGEKE
Homology
BLAST of Lag0001602 vs. NCBI nr
Match:
XP_008465638.1 (PREDICTED: bromodomain-containing protein 9-like [Cucumis melo])
HSP 1 Score: 243.4 bits (620), Expect = 1.6e-60
Identity = 142/168 (84.52%), Postives = 147/168 (87.50%), Query Frame = 0
Query: 1 MGQIVKRKKKGRPSKADLARRSSGGLASSESEPRRSLRRRNVRYNIDYDDFLEEDDEDEE 60
MGQIVKRKKKGRPSKADLARRS GGL SSESEPRRSLRRRNVRYNIDYDDFLEEDDEDEE
Sbjct: 1 MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRRRNVRYNIDYDDFLEEDDEDEE 60
Query: 61 EEERRREKKLKLVVKLNQGRDGDGGHQSPVAGISRSEARGGHASEYGSSASEG-EDEPER 120
E+ERRREKKLKLVVKLNQGRDG H SPV G+SR EAR HA EYGSSASEG EDEPER
Sbjct: 61 EDERRREKKLKLVVKLNQGRDGT--HLSPVDGVSRLEARDVHAPEYGSSASEGEEDEPER 120
Query: 121 KPLKKRRIGGGEEEDEDEDYDDQIRGDENEDDDIDESPAAAACGGRRS 168
KPLKKRRIGGGEEEDED++YDDQIRGDENEDDDIDE G + S
Sbjct: 121 KPLKKRRIGGGEEEDEDDEYDDQIRGDENEDDDIDEERGGRKVGSKGS 166
BLAST of Lag0001602 vs. NCBI nr
Match:
XP_011658979.1 (uncharacterized protein LOC101204699 [Cucumis sativus] >KAE8646055.1 hypothetical protein Csa_015532 [Cucumis sativus])
HSP 1 Score: 243.0 bits (619), Expect = 2.1e-60
Identity = 142/168 (84.52%), Postives = 147/168 (87.50%), Query Frame = 0
Query: 1 MGQIVKRKKKGRPSKADLARRSSGGLASSESEPRRSLRRRNVRYNIDYDDFLEEDDEDEE 60
MGQIVKRKKKGRPSKADLARRS GGL SSESEPRRSLRRRNVRYNIDYDDFLEEDDEDEE
Sbjct: 1 MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRRRNVRYNIDYDDFLEEDDEDEE 60
Query: 61 EEERRREKKLKLVVKLNQGRDGDGGHQSPVAGISRSEARGGHASEYGSSASEG-EDEPER 120
E+ERRREKKLKLVVKLNQGRDG H SPV G+SR EAR HA EYGSSASEG EDEPER
Sbjct: 61 EDERRREKKLKLVVKLNQGRDGT--HLSPVDGVSRLEARDLHAPEYGSSASEGEEDEPER 120
Query: 121 KPLKKRRIGGGEEEDEDEDYDDQIRGDENEDDDIDESPAAAACGGRRS 168
KPLKKRRIGGGEEEDED++YDDQIRGDENEDDDIDE G + S
Sbjct: 121 KPLKKRRIGGGEEEDEDDEYDDQIRGDENEDDDIDEERGGRKVGSKGS 166
BLAST of Lag0001602 vs. NCBI nr
Match:
XP_038897333.1 (uncharacterized protein LOC120085446 [Benincasa hispida])
HSP 1 Score: 234.6 bits (597), Expect = 7.5e-58
Identity = 139/156 (89.10%), Postives = 143/156 (91.67%), Query Frame = 0
Query: 1 MGQIVKRKKKGRPSKADLARRSSGGLASSESEPRRSLRRRNVRYNIDYDDFLEEDDEDEE 60
MGQIVKRKKKGRPSKADLARRS GGL SSESEPRRSLRRRNVRYNIDYDDFLEEDD+DEE
Sbjct: 1 MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRRRNVRYNIDYDDFLEEDDDDEE 60
Query: 61 EEERRREKKLKLVVKLNQGRDGDGGHQSPVAGISRSEARGGHASEYGSSASEG-EDEPER 120
E+ERRREKKLKLVVKLNQGRDG H SPV G+SRSEAR HA EYGSSASEG EDEPER
Sbjct: 61 EDERRREKKLKLVVKLNQGRDGT--HLSPVDGLSRSEARDAHALEYGSSASEGEEDEPER 120
Query: 121 KPLKKRRIGGGEEEDEDEDYDDQIRGDENEDDDIDE 156
KPLKKRRI GEEEDED+DYDDQIRGDENEDDDIDE
Sbjct: 121 KPLKKRRI-IGEEEDEDDDYDDQIRGDENEDDDIDE 153
BLAST of Lag0001602 vs. NCBI nr
Match:
KAG7024927.1 (Bromodomain-containing protein 9, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 230.7 bits (587), Expect = 1.1e-56
Identity = 138/173 (79.77%), Postives = 146/173 (84.39%), Query Frame = 0
Query: 1 MGQIVKRKKKGRPSKADLARRSSGGLASSESEPRRSLRRRNVRYNIDYDDFLEEDDEDEE 60
MGQIVKRKKKGRPSKADLARRS GGL SSESEPRRSLRRRNVRYN+D+DDFLEEDDEDEE
Sbjct: 1 MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRRRNVRYNVDFDDFLEEDDEDEE 60
Query: 61 EEERRREKKLKLVVKLNQGRDGDGGHQSPVAGISRSEARGGHASEYGSSASEGE-DEPER 120
E+ERRREKKLKLVVKLNQGRDG H SP++ ++RS AR HA EYGSSASE E DEPER
Sbjct: 61 EDERRREKKLKLVVKLNQGRDGT--HLSPMSRLARSGARDAHAPEYGSSASEWEDDEPER 120
Query: 121 KPLKKRRI-----GGGEEEDEDEDYDDQIRGDENEDDDIDESPAAAACGGRRS 168
KPLKKRRI GGGEEEDEDEDYDDQIRGDENEDDDIDE G + S
Sbjct: 121 KPLKKRRIGGGGGGGGEEEDEDEDYDDQIRGDENEDDDIDEERGRRKVGSKGS 171
BLAST of Lag0001602 vs. NCBI nr
Match:
KAG6592048.1 (Bromodomain-containing protein 9, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 230.7 bits (587), Expect = 1.1e-56
Identity = 138/173 (79.77%), Postives = 146/173 (84.39%), Query Frame = 0
Query: 1 MGQIVKRKKKGRPSKADLARRSSGGLASSESEPRRSLRRRNVRYNIDYDDFLEEDDEDEE 60
MGQIVKRKKKGRPSKADLARRS GGL SSESEPRRSLRRRNVRYN+D+DDFLEEDDEDEE
Sbjct: 1 MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRRRNVRYNVDFDDFLEEDDEDEE 60
Query: 61 EEERRREKKLKLVVKLNQGRDGDGGHQSPVAGISRSEARGGHASEYGSSASEGE-DEPER 120
E+ERRREKKLKLVVKLNQGRDG H SP++ ++RS AR HA EYGSSASE E DEPER
Sbjct: 61 EDERRREKKLKLVVKLNQGRDGT--HLSPMSRLARSGARDAHAPEYGSSASEWEDDEPER 120
Query: 121 KPLKKRRI-----GGGEEEDEDEDYDDQIRGDENEDDDIDESPAAAACGGRRS 168
KPLKKRRI GGGEEEDEDEDYDDQIRGDENEDDDIDE G + S
Sbjct: 121 KPLKKRRIGGGGGGGGEEEDEDEDYDDQIRGDENEDDDIDEERGRRKVGSKGS 171
BLAST of Lag0001602 vs. ExPASy TrEMBL
Match:
A0A1S3CPQ8 (bromodomain-containing protein 9-like OS=Cucumis melo OX=3656 GN=LOC103503278 PE=4 SV=1)
HSP 1 Score: 243.4 bits (620), Expect = 7.8e-61
Identity = 142/168 (84.52%), Postives = 147/168 (87.50%), Query Frame = 0
Query: 1 MGQIVKRKKKGRPSKADLARRSSGGLASSESEPRRSLRRRNVRYNIDYDDFLEEDDEDEE 60
MGQIVKRKKKGRPSKADLARRS GGL SSESEPRRSLRRRNVRYNIDYDDFLEEDDEDEE
Sbjct: 1 MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRRRNVRYNIDYDDFLEEDDEDEE 60
Query: 61 EEERRREKKLKLVVKLNQGRDGDGGHQSPVAGISRSEARGGHASEYGSSASEG-EDEPER 120
E+ERRREKKLKLVVKLNQGRDG H SPV G+SR EAR HA EYGSSASEG EDEPER
Sbjct: 61 EDERRREKKLKLVVKLNQGRDGT--HLSPVDGVSRLEARDVHAPEYGSSASEGEEDEPER 120
Query: 121 KPLKKRRIGGGEEEDEDEDYDDQIRGDENEDDDIDESPAAAACGGRRS 168
KPLKKRRIGGGEEEDED++YDDQIRGDENEDDDIDE G + S
Sbjct: 121 KPLKKRRIGGGEEEDEDDEYDDQIRGDENEDDDIDEERGGRKVGSKGS 166
BLAST of Lag0001602 vs. ExPASy TrEMBL
Match:
A0A6J1FCW7 (uncharacterized protein LOC111442853 OS=Cucurbita moschata OX=3662 GN=LOC111442853 PE=4 SV=1)
HSP 1 Score: 230.3 bits (586), Expect = 6.8e-57
Identity = 138/174 (79.31%), Postives = 146/174 (83.91%), Query Frame = 0
Query: 1 MGQIVKRKKKGRPSKADLARRSSGGLASSESEPRRSLRRRNVRYNIDYDDFLEEDDEDEE 60
MGQIVKRKKKGRPSKADLARRS GGL SSESEPRRSLRRRNVRYN+D+DDFLEEDDEDEE
Sbjct: 1 MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRRRNVRYNVDFDDFLEEDDEDEE 60
Query: 61 EEERRREKKLKLVVKLNQGRDGDGGHQSPVAGISRSEARGGHASEYGSSASEGE-DEPER 120
E+ERRREKKLKLVVKLNQGRDG H SP++ ++RS AR HA EYGSSASE E DEPER
Sbjct: 61 EDERRREKKLKLVVKLNQGRDGT--HLSPMSRLARSGARDAHAPEYGSSASEWEDDEPER 120
Query: 121 KPLKKRRI------GGGEEEDEDEDYDDQIRGDENEDDDIDESPAAAACGGRRS 168
KPLKKRRI GGGEEEDEDEDYDDQIRGDENEDDDIDE G + S
Sbjct: 121 KPLKKRRIGGGGGGGGGEEEDEDEDYDDQIRGDENEDDDIDEERGRRKVGSKGS 172
BLAST of Lag0001602 vs. ExPASy TrEMBL
Match:
A0A6J1IK11 (uncharacterized protein LOC111475664 OS=Cucurbita maxima OX=3661 GN=LOC111475664 PE=4 SV=1)
HSP 1 Score: 228.4 bits (581), Expect = 2.6e-56
Identity = 137/175 (78.29%), Postives = 145/175 (82.86%), Query Frame = 0
Query: 1 MGQIVKRKKKGRPSKADLARRSSGGLASSESEPRRSLRRRNVRYNIDYDDFLEEDDEDEE 60
MGQIVKRKKKGRPSKADLARRS GGL SSESEPRRSLRRRNVRYN+D+DDFLEEDDEDEE
Sbjct: 1 MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRRRNVRYNVDFDDFLEEDDEDEE 60
Query: 61 EEERRREKKLKLVVKLNQGRDGDGGHQSPVAGISRSEARGGHASEYGSSASEGE-DEPER 120
E+ERRREKKLKLVVKLNQGRDG H SPV+ ++RS R HA EYGSSASE E DEPER
Sbjct: 61 EDERRREKKLKLVVKLNQGRDGT--HLSPVSRLARSGTRDSHAPEYGSSASEWEDDEPER 120
Query: 121 KPLKKRRIGGG-------EEEDEDEDYDDQIRGDENEDDDIDESPAAAACGGRRS 168
KPLKKRRIGGG E+EDEDEDYDDQIRGDENEDDDIDE G + S
Sbjct: 121 KPLKKRRIGGGGGGGGEEEDEDEDEDYDDQIRGDENEDDDIDEERGRRKVGSKGS 173
BLAST of Lag0001602 vs. ExPASy TrEMBL
Match:
A0A6J1CCU6 (uncharacterized protein LOC111010405 OS=Momordica charantia OX=3673 GN=LOC111010405 PE=4 SV=1)
HSP 1 Score: 228.4 bits (581), Expect = 2.6e-56
Identity = 135/158 (85.44%), Postives = 142/158 (89.87%), Query Frame = 0
Query: 1 MGQIVKRKKKGRPSKADLARRSSGGLASSESEPRRSLRRRNVRYNIDYDDFLEEDDEDEE 60
MGQIVKRKKKGRPSKADLARRS G LASSESEPRRSLRRRNVRYNIDYDDFL+ED+E+EE
Sbjct: 1 MGQIVKRKKKGRPSKADLARRSCGALASSESEPRRSLRRRNVRYNIDYDDFLQEDEEEEE 60
Query: 61 EE--ERRREKKLKLVVKLNQGRDGDGGHQSPVAG-ISRSEARGGHASEYGSSASEGEDEP 120
EE ERRREKKLKLVVKLNQGR DGGH SPVAG ++RS RG HA EY SSASEGEDEP
Sbjct: 61 EEEDERRREKKLKLVVKLNQGR--DGGHPSPVAGLLARSGPRGAHAPEYASSASEGEDEP 120
Query: 121 ERKPLKKRRIGGGEEEDEDEDYDDQIRGDENEDDDIDE 156
E KPLKKRRIGG E +DED+DYDDQIRGDENEDDDIDE
Sbjct: 121 EGKPLKKRRIGGAEVDDEDDDYDDQIRGDENEDDDIDE 156
BLAST of Lag0001602 vs. ExPASy TrEMBL
Match:
A0A6J1FL99 (uncharacterized protein LOC111446273 OS=Cucurbita moschata OX=3662 GN=LOC111446273 PE=4 SV=1)
HSP 1 Score: 225.7 bits (574), Expect = 1.7e-55
Identity = 134/155 (86.45%), Postives = 137/155 (88.39%), Query Frame = 0
Query: 1 MGQIVKRKKKGRPSKADLARRSSGGLASSESEPRRSLRRRNVRYNIDYDDFLEEDDEDEE 60
MGQIVKRKKKGRPSKADLARRS GGL SSESEPRRSLR RNVRYNIDYDDFLEEDDEDEE
Sbjct: 1 MGQIVKRKKKGRPSKADLARRSGGGLTSSESEPRRSLRSRNVRYNIDYDDFLEEDDEDEE 60
Query: 61 EEERRREKKLKLVVKLNQGRDGDGGHQSPVAGISRSEARGGHASEYGSSASEGEDEPERK 120
E ERRREKKLKLVVKLNQ RDG+ H SPVA +SRS ARG A+EYGSSASEGEDEPERK
Sbjct: 61 ENERRREKKLKLVVKLNQSRDGE--HLSPVARLSRSGARGEDAAEYGSSASEGEDEPERK 120
Query: 121 PLKKRRIGGGEEEDEDEDYDDQIRGDENEDDDIDE 156
PLKKRRIGGGEEEDEDED GDENEDDDIDE
Sbjct: 121 PLKKRRIGGGEEEDEDED------GDENEDDDIDE 147
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008465638.1 | 1.6e-60 | 84.52 | PREDICTED: bromodomain-containing protein 9-like [Cucumis melo] | [more] |
XP_011658979.1 | 2.1e-60 | 84.52 | uncharacterized protein LOC101204699 [Cucumis sativus] >KAE8646055.1 hypothetica... | [more] |
XP_038897333.1 | 7.5e-58 | 89.10 | uncharacterized protein LOC120085446 [Benincasa hispida] | [more] |
KAG7024927.1 | 1.1e-56 | 79.77 | Bromodomain-containing protein 9, partial [Cucurbita argyrosperma subsp. argyros... | [more] |
KAG6592048.1 | 1.1e-56 | 79.77 | Bromodomain-containing protein 9, partial [Cucurbita argyrosperma subsp. sororia... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3CPQ8 | 7.8e-61 | 84.52 | bromodomain-containing protein 9-like OS=Cucumis melo OX=3656 GN=LOC103503278 PE... | [more] |
A0A6J1FCW7 | 6.8e-57 | 79.31 | uncharacterized protein LOC111442853 OS=Cucurbita moschata OX=3662 GN=LOC1114428... | [more] |
A0A6J1IK11 | 2.6e-56 | 78.29 | uncharacterized protein LOC111475664 OS=Cucurbita maxima OX=3661 GN=LOC111475664... | [more] |
A0A6J1CCU6 | 2.6e-56 | 85.44 | uncharacterized protein LOC111010405 OS=Momordica charantia OX=3673 GN=LOC111010... | [more] |
A0A6J1FL99 | 1.7e-55 | 86.45 | uncharacterized protein LOC111446273 OS=Cucurbita moschata OX=3662 GN=LOC1114462... | [more] |