
Lag0001595 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGAAGTTTCAGGTATTAATTACTCTGAAAGGTCATAGATTACAGAAGTTTATCGATGTTGATTATGAAGTCCCACCAAAATTTCTTCCCACGACCAGTGAAGCATCCTCTGCAAAAATCTCCAACCCAGACTATGAATACTGGATTCGGCAAGATAATCTAATAACAACTTGGTTTCTTGGATCAATGTCGACTCCAATTGTTGCAGAATTGCTCGATTGCAAAACTTCGCGAGAGGTATGGGATTATCTTGCTACTTGTTTTTCTTCCAAACAAGTTGCTAGAATTCTTGACCTAAAGACTAAGCTCGGTCTTATGAAGAAAGGAAGTCTTGGTCTCCAAGAATACTTCACTAAGGTGAAGAATTTGGTTGATGCCCTAACCACTGCTAGAAAACCAATCTCGAACTATGATCACATTCTTCATAATTCTTTTCGGATTGGGAATGTTAAAGAAATATTTATTCGTTCCACTTCCTATTTATTAGGAAGAGAATGA ATGTGGAAGTTTCAGGTATTAATTACTCTGAAAGGTCATAGATTACAGAAGTTTATCGATGTTGATTATGAAGTCCCACCAAAATTTCTTCCCACGACCAGTGAAGCATCCTCTGCAAAAATCTCCAACCCAGACTATGAATACTGGATTCGGCAAGATAATCTAATAACAACTTGGTTTCTTGGATCAATGTCGACTCCAATTGTTGCAGAATTGCTCGATTGCAAAACTTCGCGAGAGGTATGGGATTATCTTGCTACTTGTTTTTCTTCCAAACAAGTTGCTAGAATTCTTGACCTAAAGACTAAGCTCGGTCTTATGAAGAAAGGAAGTCTTGGTCTCCAAGAATACTTCACTAAGGTGAAGAATTTGGTTGATGCCCTAACCACTGCTAGAAAACCAATCTCGAACTATGATCACATTCTTCATAATTCTTTTCGGATTGGGAATGTTAAAGAAATATTTATTCGTTCCACTTCCTATTTATTAGGAAGAGAATGA ATGTGGAAGTTTCAGGTATTAATTACTCTGAAAGGTCATAGATTACAGAAGTTTATCGATGTTGATTATGAAGTCCCACCAAAATTTCTTCCCACGACCAGTGAAGCATCCTCTGCAAAAATCTCCAACCCAGACTATGAATACTGGATTCGGCAAGATAATCTAATAACAACTTGGTTTCTTGGATCAATGTCGACTCCAATTGTTGCAGAATTGCTCGATTGCAAAACTTCGCGAGAGGTATGGGATTATCTTGCTACTTGTTTTTCTTCCAAACAAGTTGCTAGAATTCTTGACCTAAAGACTAAGCTCGGTCTTATGAAGAAAGGAAGTCTTGGTCTCCAAGAATACTTCACTAAGGTGAAGAATTTGGTTGATGCCCTAACCACTGCTAGAAAACCAATCTCGAACTATGATCACATTCTTCATAATTCTTTTCGGATTGGGAATGTTAAAGAAATATTTATTCGTTCCACTTCCTATTTATTAGGAAGAGAATGA MWKFQVLITLKGHRLQKFIDVDYEVPPKFLPTTSEASSAKISNPDYEYWIRQDNLITTWFLGSMSTPIVAELLDCKTSREVWDYLATCFSSKQVARILDLKTKLGLMKKGSLGLQEYFTKVKNLVDALTTARKPISNYDHILHNSFRIGNVKEIFIRSTSYLLGRE Homology
BLAST of Lag0001595 vs. NCBI nr
Match: XP_022156747.1 (uncharacterized protein LOC111023586 [Momordica charantia]) HSP 1 Score: 149.8 bits (377), Expect = 2.0e-32 Identity = 69/149 (46.31%), Postives = 103/149 (69.13%), Query Frame = 0
BLAST of Lag0001595 vs. NCBI nr
Match: XP_022154487.1 (uncharacterized protein LOC111021757 [Momordica charantia]) HSP 1 Score: 148.7 bits (374), Expect = 4.5e-32 Identity = 67/145 (46.21%), Postives = 101/145 (69.66%), Query Frame = 0
BLAST of Lag0001595 vs. NCBI nr
Match: KAA0048297.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 139.4 bits (350), Expect = 2.8e-29 Identity = 65/145 (44.83%), Postives = 99/145 (68.28%), Query Frame = 0
BLAST of Lag0001595 vs. NCBI nr
Match: TYK10642.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 139.4 bits (350), Expect = 2.8e-29 Identity = 65/145 (44.83%), Postives = 99/145 (68.28%), Query Frame = 0
BLAST of Lag0001595 vs. NCBI nr
Match: KAA0067213.1 (keratin, type II cytoskeletal 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 139.0 bits (349), Expect = 3.6e-29 Identity = 69/167 (41.32%), Postives = 109/167 (65.27%), Query Frame = 0
BLAST of Lag0001595 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.7e-11 Identity = 38/141 (26.95%), Postives = 66/141 (46.81%), Query Frame = 0
BLAST of Lag0001595 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 5.2e-07 Identity = 34/136 (25.00%), Postives = 62/136 (45.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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