Lag0001242 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAGACGAAGATTGGGAAGCTCTAGATGAAGAGGCAGTTGCAAGCATAAGGATGTGTTTGTCAATGGATGTGGCAAGTCTAGTAGCCCATGTGACAACTGCAGTTAAATTGATGGAAGCGCTTACAAACAGGTATGAAAAACCTCTGCTAACAATAAGGTCTACCTAGTTAAGAAGTTTTTCAACATGCAAATGTCTAAGGATGCTTCTGTGAATTCCTATATTAATGAGGTTACCACTTTGATTAATCCGTTAAAATCTGTTTAGATAGAATTTACTGATGAGGTGAATGTTATTCAGTTGTTAACGTCTTTACCTGATAGTTGGGAAATGATGAAGACAACAGTGTCTAATTCGACTAGAAATAATACTTTAAAATTTTCAGAAGTTTGTGATTTAGCCATAGCTGAGGAAATTCGTAGGCAAGTAGTAATAAAGAGTCTACACTAGGGTCAGCTTTGGTTATGACTAAGGGTAAAGATAAGATTGATGAAGAAAATGAACCGAGTAGCAGTAGTAGAAAGTGGAAAATAGGAATGAGGTAAAATGTTTTTACTGCCATAAGAAAGGTCACTTCAAGAGTCGGTGTAGAAAGTTCAAAGAGGATCAAAGAAGAAAACATGAGGCAAGTATAGTGTATGATGCCTTAGTTTGTGTTCAGAGTGACACAAGGTGTAGTAACCACTCATCAGATTGGATATTAGACAGTGCAGCTTCTGTACACATAGCTTTAGATAGGAGTTTGTTCACATCATTCACAGGAGGGCATCATGGCCTAGTGAGGATGGGAATGGTAGAACCTCCAAAACTAGATGGATTGGAGATGTTAGTCTGAAGACAGAATGTGGAGATAAATTGGTACTATGAGATGTCAGGTTCGTGCCTAATATCAAATGAATCTATTTCTATTGGTAAGTTGGTAGATGATGGTTACATGTGTGAGTTTGGTAGTCGCTAGTATAACTCAAGTTAGGATCCCAGGTAGTGTCAGTTGGCCACAGGAATCTACACTGTACAAATGTCAGTTGAATGTTGCCAAAGGATCAAAGAGACAGTGGATGTCGGTTAAAGCTGCATATGGCAGTTGTAGAGGTACAGTTAAGCCAACAACAATGATAGCCAATTTCGATCTGTCCAATCAAGATCCTTCAGTTCAGAAACAATTGGGAAGTCCAGGAGAGAAAGTTGATGGCTATCGTGAATCCCCATTGTTAGACGCTCGATGA ATGACAGACGAAGATTGGGAAGCTCTAGATGAAGAGGCAGTTGCAAGCATAAGGATGTGTTTGTCAATGGATGTGGCAAGTCTAGTAGCCCATGTGACAACTGCAGTTAAATTGATGGAAGCGCTTACAAACAGTTGGGAAATGATGAAGACAACAGTGTCTAATTCGACTAGAAATAATACTTTAAAATTTTCAGAAGTTTGTGATTTAGCCATAGCTGAGGAAATTCGTAGGCAAGTAAGTGACACAAGGTGTAGTAACCACTCATCAGATTGGATATTAGACAGTGCAGCTTCTGTACACATAGCTTTAGATAGGAGTTTGTTCACATCATTCACAGGAGGGCATCATGGCCTAGTGAGGATGGGAATGGTAGAACCTCCAAAACTAGATGGATTGGAGATGATCCCAGGTAGTGTCAGTTGGCCACAGGAATCTACACTGTACAAATGTCAGTTGAATGTTGCCAAAGGATCAAAGAGACAGTGGATGTCGGTTAAAGCTGCATATGGCAGTTGTAGAGGTACAGTTAAGCCAACAACAATGATAGCCAATTTCGATCTGTCCAATCAAGATCCTTCAGTTCAGAAACAATTGGGAAGTCCAGGAGAGAAAGTTGATGGCTATCGTGAATCCCCATTGTTAGACGCTCGATGA ATGACAGACGAAGATTGGGAAGCTCTAGATGAAGAGGCAGTTGCAAGCATAAGGATGTGTTTGTCAATGGATGTGGCAAGTCTAGTAGCCCATGTGACAACTGCAGTTAAATTGATGGAAGCGCTTACAAACAGTTGGGAAATGATGAAGACAACAGTGTCTAATTCGACTAGAAATAATACTTTAAAATTTTCAGAAGTTTGTGATTTAGCCATAGCTGAGGAAATTCGTAGGCAAGTAAGTGACACAAGGTGTAGTAACCACTCATCAGATTGGATATTAGACAGTGCAGCTTCTGTACACATAGCTTTAGATAGGAGTTTGTTCACATCATTCACAGGAGGGCATCATGGCCTAGTGAGGATGGGAATGGTAGAACCTCCAAAACTAGATGGATTGGAGATGATCCCAGGTAGTGTCAGTTGGCCACAGGAATCTACACTGTACAAATGTCAGTTGAATGTTGCCAAAGGATCAAAGAGACAGTGGATGTCGGTTAAAGCTGCATATGGCAGTTGTAGAGGTACAGTTAAGCCAACAACAATGATAGCCAATTTCGATCTGTCCAATCAAGATCCTTCAGTTCAGAAACAATTGGGAAGTCCAGGAGAGAAAGTTGATGGCTATCGTGAATCCCCATTGTTAGACGCTCGATGA MTDEDWEALDEEAVASIRMCLSMDVASLVAHVTTAVKLMEALTNSWEMMKTTVSNSTRNNTLKFSEVCDLAIAEEIRRQVSDTRCSNHSSDWILDSAASVHIALDRSLFTSFTGGHHGLVRMGMVEPPKLDGLEMIPGSVSWPQESTLYKCQLNVAKGSKRQWMSVKAAYGSCRGTVKPTTMIANFDLSNQDPSVQKQLGSPGEKVDGYRESPLLDAR Homology
BLAST of Lag0001242 vs. NCBI nr
Match: TMW80639.1 (hypothetical protein EJD97_017495, partial [Solanum chilense]) HSP 1 Score: 79.3 bits (194), Expect = 4.4e-11 Identity = 65/191 (34.03%), Postives = 94/191 (49.21%), Query Frame = 0
BLAST of Lag0001242 vs. NCBI nr
Match: KAE8660039.1 (hypothetical protein F3Y22_tig00116959pilonHSYRG00493 [Hibiscus syriacus]) HSP 1 Score: 77.0 bits (188), Expect = 2.2e-10 Identity = 53/149 (35.57%), Postives = 75/149 (50.34%), Query Frame = 0
BLAST of Lag0001242 vs. NCBI nr
Match: KAB5561215.1 (hypothetical protein DKX38_006172 [Salix brachista]) HSP 1 Score: 69.3 bits (168), Expect = 4.6e-08 Identity = 54/211 (25.59%), Postives = 90/211 (42.65%), Query Frame = 0
BLAST of Lag0001242 vs. NCBI nr
Match: RVX04508.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]) HSP 1 Score: 66.2 bits (160), Expect = 3.9e-07 Identity = 49/153 (32.03%), Postives = 68/153 (44.44%), Query Frame = 0
BLAST of Lag0001242 vs. NCBI nr
Match: KAG6525408.1 (hypothetical protein ZIOFF_015364 [Zingiber officinale]) HSP 1 Score: 63.2 bits (152), Expect = 3.3e-06 Identity = 37/108 (34.26%), Postives = 57/108 (52.78%), Query Frame = 0
BLAST of Lag0001242 vs. ExPASy TrEMBL
Match: A0A6N2AG08 (Uncharacterized protein (Fragment) OS=Solanum chilense OX=4083 GN=EJD97_017495 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 2.1e-11 Identity = 65/191 (34.03%), Postives = 94/191 (49.21%), Query Frame = 0
BLAST of Lag0001242 vs. ExPASy TrEMBL
Match: A0A6A2XNT2 (NB-ARC domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116959pilonHSYRG00493 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.1e-10 Identity = 53/149 (35.57%), Postives = 75/149 (50.34%), Query Frame = 0
BLAST of Lag0001242 vs. ExPASy TrEMBL
Match: A0A5N5N166 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_006172 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 2.2e-08 Identity = 54/211 (25.59%), Postives = 90/211 (42.65%), Query Frame = 0
BLAST of Lag0001242 vs. ExPASy TrEMBL
Match: A0A7N2LJ68 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 5.0e-08 Identity = 44/123 (35.77%), Postives = 67/123 (54.47%), Query Frame = 0
BLAST of Lag0001242 vs. ExPASy TrEMBL
Match: A0A438J6C8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_3536 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 1.9e-07 Identity = 49/153 (32.03%), Postives = 68/153 (44.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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