Lag0001193 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0001193
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr4: 26409007 .. 26412061 (+)
RNA-Seq ExpressionLag0001193
SyntenyLag0001193
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCCGGCGGCAGTGAGCAGTGGCCGGCCGCCGGAGATTTGAAGAAGAAGAAGGAAGAGGTTGGGGGAAGAGGATGAAGAAGAGAGGAAGAAGAGAGAGATTTAAAAATAATTAAAATAATAATATTTTATTGTTTTTATTTATTTTTATTTTAAAATTTAAAAAAAAAGAATTTTTTAATTAAAAAAATGTGGCCACGTCAGCAGTCTGTTAGCATTTAAGGCAAACTGGATGGCAGGGACCAAAATGCTGCTTATCTCAAACCTCAGGGGTATTTTTGTTGAGTTTTAGAACTCAGGGACCAAAGTGTAACTTAACCCAAACCTCAGGGACCAAAAGTGTATTTTTCCCTAATTTTAATATATAGTTTCAATATGAATCTAATTCATATTAAATTTAATATTTGATCAAATATTAAATTTTCCCATAAATTAATTTTGAATCTAAAAAATAATGTCAACAAGGTTCTCTGTTTTTCTCTCTAGAGAAACAGTAGAAGACGGCGACCATTGTGCTGAGTTGGGCGGTGAATATACCGATCCTGGTGCAGCTTAGGTTGCAGTTGGTGTGTATTGTTGCTGTATTTTGTGCATCGAGAAGGTTGGTGGTGTTTACAATGTCCATGGGGGAGGAAGATAAGCTGGTGAAGCATCTAGCAGAGCTTCATGTTACTCCTGCGGAAAAGGCCAGCATTTTCAAATTACCTAATAGTGAGATAGATCGTTCGGGGCAGAAATTGAAGAATTCCATCTTGTGCAAAATACATACAAAGAAGAAAATAAATCCTGAAATGTTTAGTTCCAAGATGCCGAAGATATGGAACCAAGAACACACGATCGTTGATAAGGTGGGATTCAATATTTTCATATGCAAATTAAAAATGCGAAAATTAAAGGATGGATCTTGGAGTCGGGACCATGGTTTTACGACAAGGCCATGCTTTTATTCGAGGAGCCCAAGGCGGGGGTTAGTTGCGACGACATGGAATTCAGGTATGTATCTCTATGGACTCACTTTCATAAGTTACCATATGCTTGCTTTTCTAGGACATCAGCGGAAGCTATTGGTAATCTGCTTGGGAAAGTAGAAAAAGTGGATATACGAGAAGATGTGGATCCAACTTGGGGATGTTCATTACGGGTTAAAATTCAGATTGATGTTCATATTCCGCTAAAAAGAGGTATTTTTTTGCAATCAGGGAGTAAGGGGAAAAAATGGATCCCAGTTACGTATGAAAAATTACCGGATTTTTGTTATGGTTGCGGTTGTTTGGGTCACACCATTAAGGAGTGTGAAAACTTATTGGGACCAAATGATGGTGAACTACGATATGGTGCATGGTTAAGAGAACCTATAAAGGTATGGAGCTCCGACGACAGTTCAATAGGAAGAAATTTCCATGGCCGAGGAAGAGGTAGCTCCTGGGGGGGGGGGGGTAGAGGACGGGGTCGGGCAGAGGTTTTCGATAATGGGATGAAGAGGAAACTGAAACGACAACAAACAAGGAACATGTTGCGGTGGAAAAAAACTTGCCGGCGGCAAGACCAGATCCGCCGGTGACCGAATCCAAGACGTTAGGAAAGGAAAGAGTAACGGTTGAGTATTCGAAAATGGAGTTAGAGCCAAATTTGGTAAGTGATGATTTAGGAAAGATTTGTTCCAACGGGAAAGAGAAAAATATTAAGACAAAGGAAAGTAATTATGAAAGGAATATTTTAGGCAGTGACCAAAAGCTGGAAGTTTTGCAGAATGTTAATGATGATTTAATGATGAAGAATAAAGAAGAATTAATGAGGATTCTCATTCAATGGAGATGAAGCCTTTGCAAACGGTGCAAGAAAAAAAATTGGAAATTTGAATTTGGTAGTTTCTAAGAATGATAAATTGAAAAAGGTTGAGTTGGTGATGGAGCCTTTAATACAGGAAGAATTTTTGCCGAAGGATGGTAGTAAATTTAAAAAGTGGAAGAGAGTCCTAAGGGGGAACGTCATTTGGAAACATACATACAGGACAACCAATCTCTAAGTGGGTCAAAACATAAAGCTGAAGCGGAGCTGGTACAGGTGGAAACAAGTAAACGACGAATAGTGATTGAGGAGAATGATTTAAATGCGCGATCGGTGGAGGCTGCGAGTTAGCCCCGCCGGGCACAATGAAAATCCTAAGTTGGAATGTCCAGGGTTTGGGGAACCCTAGGACATTAAGAGTGCTTAGGCACATTATTAAAACACATGGTCCCCAAATGGTTTTTTAATGGAAACCAAGCTTAAAAAAAACATTAGTGACAGAATTAGAAGTCAACTCAAATTTGATTGTGGTATCGAGGTTCCATGTCAAGGTCTGAGCGATGGGTTGCTTCTCCTTTGGATGCATGATATTAATGTCATTCTTCGTTCCTATTCTAAGGGCACATTGATGTGTGTGTTAAGGAGAAAGATTGGTCTTGGAGGTTTACGGGAATAATATATGGTAATCCTGTGAGAAATTTACATAAGGAAACGTGGGCTCTTATGCAGCGTCTGTGAGATCACACGAATTTACCTTGGGTACTTGTTGGTGACTTTAATGAAATAACAGATAATTCTGAGAAGATAGGAGGCATTGATAGGAGTGAATCTGAGATGAGGAAATTTAGGGACACAATTGATGTTTGCGGTCTAATGGATCCGGGTTTCTGTGGGCCAATGTTCACTTGGTGCAATAATCATGTCAGTCAAGATATTATTTGGGCAAGACTTGAGGTTCCTAATTAACTATCCGATGATGTGTAAACGTAGCAGGCTGACGGTCCACCATCTAGCTAAATTGGCCTCGGATCATAGACCAATCATTGCTGATTGGAAGGAAGAGCCACCAGACCATGGTAAACATATGATTGGTCGACCTAAACGGTTTGAGGAGGTATGGACAAAATATGAAGAGTGTAGAGAGATTGTGGAGCAAGTCTGGAAAAGTGGTGATAGGAATGGAAGGGGAGATCTTTTGGAAAAAACCAAGATGTGTTTGAGCCGCCTGGGTCAATGGAGTAGAGAAAATATGAGGGATCTATAA

mRNA sequence

ATGGCGGCCGGCGGCAGTGAGCAGTGGCCGGCCGCCGGAGATTTGAAGAAGAAGAAGGAAGAGCTTAGGTTGCAGTTGGTGTGTATTGTTGCTGTATTTTGTGCATCGAGAAGGTTGGTGGTGTTTACAATGTCCATGGGGGAGGAAGATAAGCTGGTGAAGCATCTAGCAGAGCTTCATGTTACTCCTGCGGAAAAGGCCAGCATTTTCAAATTACCTAATAGTGAGATAGATCGTTCGGGGCAGAAATTGAAGAATTCCATCTTGTGCAAAATACATACAAAGAAGAAAATAAATCCTGAAATGTTTAGTTCCAAGATGCCGAAGATATGGAACCAAGAACACACGATCGTTGATAAGGCCATGCTTTTATTCGAGGAGCCCAAGGCGGGGGTTAGTTGCGACGACATGGAATTCAGGTATGTATCTCTATGGACTCACTTTCATAAGTTACCATATGCTTGCTTTTCTAGGACATCAGCGGAAGCTATTGGTAATCTGCTTGGGAAAGTAGAAAAAGTGGATATACGAGAAGATGTGGATCCAACTTGGGGATGTTCATTACGGGTTAAAATTCAGATTGATGTTCATATTCCGCTAAAAAGAGGTATTTTTTTGCAATCAGGGAGTAAGGGGAAAAAATGGATCCCAGTTACGTATGAAAAATTACCGGATTTTTGTTATGGTTGCGGTTGTTTGGGTCACACCATTAAGGAGTGTGAAAACTTATTGGGACCAAATGATGGTGAACTACGATATGGTGCATGGTTAAGAGAACCTATAAAGGTATGGAGCTCCGACGACAGTTCAATAGGAAGAAATTTCCATGGCCGAGGAAGAGAGGAAACTGAAACGACAACAAACAAGGAACATGTTGCGGTGGAAAAAAACTTGCCGGCGGCAAGACCAGATCCGCCGGTGACCGAATCCAAGACGTTAGGAAAGGAAAGAGTAACGGTTGAGTATTCGAAAATGGAGTTAGAGCCAAATTTGGACAACCAATCTCTAAGTGGGTCAAAACATAAAGCTGAAGCGGAGCTGGTACAGGTGGAAACAAGTAAACGACGAATAGTGATTGAGGAGAATGATTTAAATGCGCGATCGGTGGAGGCTGCGAATAATTCTGAGAAGATAGGAGGCATTGATAGGAGTGAATCTGAGATGAGGAAATTTAGGGACACAATTGATGTTTGCGGTCTAATGGATCCGGGTTTCTGTGGGCCAATGTTCACTTGGCTGACGGTCCACCATCTAGCTAAATTGGCCTCGGATCATAGACCAATCATTGCTGATTGGAAGGAAGAGCCACCAGACCATGGTAAACATATGATTGGTCGACCTAAACGGTTTGAGGAGGTATGGACAAAATATGAAGAGTGTAGAGAGATTGTGGAGCAAGTCTGGAAAAGTGGTGATAGGAATGGAAGGGGAGATCTTTTGGAAAAAACCAAGATGTGTTTGAGCCGCCTGGGTCAATGGAGTAGAGAAAATATGAGGGATCTATAA

Coding sequence (CDS)

ATGGCGGCCGGCGGCAGTGAGCAGTGGCCGGCCGCCGGAGATTTGAAGAAGAAGAAGGAAGAGCTTAGGTTGCAGTTGGTGTGTATTGTTGCTGTATTTTGTGCATCGAGAAGGTTGGTGGTGTTTACAATGTCCATGGGGGAGGAAGATAAGCTGGTGAAGCATCTAGCAGAGCTTCATGTTACTCCTGCGGAAAAGGCCAGCATTTTCAAATTACCTAATAGTGAGATAGATCGTTCGGGGCAGAAATTGAAGAATTCCATCTTGTGCAAAATACATACAAAGAAGAAAATAAATCCTGAAATGTTTAGTTCCAAGATGCCGAAGATATGGAACCAAGAACACACGATCGTTGATAAGGCCATGCTTTTATTCGAGGAGCCCAAGGCGGGGGTTAGTTGCGACGACATGGAATTCAGGTATGTATCTCTATGGACTCACTTTCATAAGTTACCATATGCTTGCTTTTCTAGGACATCAGCGGAAGCTATTGGTAATCTGCTTGGGAAAGTAGAAAAAGTGGATATACGAGAAGATGTGGATCCAACTTGGGGATGTTCATTACGGGTTAAAATTCAGATTGATGTTCATATTCCGCTAAAAAGAGGTATTTTTTTGCAATCAGGGAGTAAGGGGAAAAAATGGATCCCAGTTACGTATGAAAAATTACCGGATTTTTGTTATGGTTGCGGTTGTTTGGGTCACACCATTAAGGAGTGTGAAAACTTATTGGGACCAAATGATGGTGAACTACGATATGGTGCATGGTTAAGAGAACCTATAAAGGTATGGAGCTCCGACGACAGTTCAATAGGAAGAAATTTCCATGGCCGAGGAAGAGAGGAAACTGAAACGACAACAAACAAGGAACATGTTGCGGTGGAAAAAAACTTGCCGGCGGCAAGACCAGATCCGCCGGTGACCGAATCCAAGACGTTAGGAAAGGAAAGAGTAACGGTTGAGTATTCGAAAATGGAGTTAGAGCCAAATTTGGACAACCAATCTCTAAGTGGGTCAAAACATAAAGCTGAAGCGGAGCTGGTACAGGTGGAAACAAGTAAACGACGAATAGTGATTGAGGAGAATGATTTAAATGCGCGATCGGTGGAGGCTGCGAATAATTCTGAGAAGATAGGAGGCATTGATAGGAGTGAATCTGAGATGAGGAAATTTAGGGACACAATTGATGTTTGCGGTCTAATGGATCCGGGTTTCTGTGGGCCAATGTTCACTTGGCTGACGGTCCACCATCTAGCTAAATTGGCCTCGGATCATAGACCAATCATTGCTGATTGGAAGGAAGAGCCACCAGACCATGGTAAACATATGATTGGTCGACCTAAACGGTTTGAGGAGGTATGGACAAAATATGAAGAGTGTAGAGAGATTGTGGAGCAAGTCTGGAAAAGTGGTGATAGGAATGGAAGGGGAGATCTTTTGGAAAAAACCAAGATGTGTTTGAGCCGCCTGGGTCAATGGAGTAGAGAAAATATGAGGGATCTATAA

Protein sequence

MAAGGSEQWPAAGDLKKKKEELRLQLVCIVAVFCASRRLVVFTMSMGEEDKLVKHLAELHVTPAEKASIFKLPNSEIDRSGQKLKNSILCKIHTKKKINPEMFSSKMPKIWNQEHTIVDKAMLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSAEAIGNLLGKVEKVDIREDVDPTWGCSLRVKIQIDVHIPLKRGIFLQSGSKGKKWIPVTYEKLPDFCYGCGCLGHTIKECENLLGPNDGELRYGAWLREPIKVWSSDDSSIGRNFHGRGREETETTTNKEHVAVEKNLPAARPDPPVTESKTLGKERVTVEYSKMELEPNLDNQSLSGSKHKAEAELVQVETSKRRIVIEENDLNARSVEAANNSEKIGGIDRSESEMRKFRDTIDVCGLMDPGFCGPMFTWLTVHHLAKLASDHRPIIADWKEEPPDHGKHMIGRPKRFEEVWTKYEECREIVEQVWKSGDRNGRGDLLEKTKMCLSRLGQWSRENMRDL
Homology
BLAST of Lag0001193 vs. NCBI nr
Match: CAD6267426.1 (unnamed protein product [Miscanthus lutarioriparius])

HSP 1 Score: 142.1 bits (357), Expect = 1.3e-29
Identity = 102/355 (28.73%), Postives = 161/355 (45.35%), Query Frame = 0

Query: 130 AGVSCDDMEFRYVSLWTHFHKLPYACFSRTSAEAIGNLLGKVEKVDIREDVDPTWGCSLR 189
           A V   D+ F ++S+W   + +PY   +      I   +G VEK+D+ +D D  WG  LR
Sbjct: 71  ASVRPSDIYFDHMSIWVRIYNIPYGLMNGKWGYVIAKKIGPVEKLDV-DDQDRAWGAYLR 130

Query: 190 VKIQIDVHIPLKRGIFLQSGSKG-KKWIPVTYEKLPDFCYGCGCLGHTIKECENLLGP-- 249
            K+QI++  PL RG+ + S  +  K+W  V YEKLP++CY CG +GH+  EC   L P  
Sbjct: 131 AKVQINITKPLMRGVSIFSTKRQVKEWYEVRYEKLPNYCYSCGIIGHSSVEC---LTPAE 190

Query: 250 --NDGELRYGAWLREPIKVWSSDDSSIGRNFHGRGREETETTTNKEHVAVEKNLPAARPD 309
              DG L Y   LR P      DD         R +  ++    +  ++  K+       
Sbjct: 191 RDADGMLPYSGDLRVP------DD---------RKKRPSDDVNGQSSISAGKS------- 250

Query: 310 PPVTESKTLGKERVTVEYSKMELEPNLDNQSLSGSKHKAEAELVQVETSKRRIVIEENDL 369
                  T G+E                  S+SG+        + + T   ++   + D 
Sbjct: 251 -----GGTSGQE------------------SMSGA--------IDLRTLNNQV---KRDF 310

Query: 370 NARSVEAANNSEKIGGIDRSESEMRKFRDTIDVCGLMDPGFCGPMFTWLTVHHLAKLASD 429
           N    EA ++ E +G   R ES+M+ FR+ ++ CGL+D GF GP FTW   ++      D
Sbjct: 311 N----EALSSDEHLGRTGRGESQMKLFRECLENCGLLDLGFSGPKFTW---NNRGGDTKD 341

Query: 430 HRPIIADWKEEPPDHGKHMIGRPKRFEEVWTKYEECREIVEQVWKSGDRNGRGDL 480
           +RP+  ++                R+E +W +  + +E+VE+ W  G  NG  DL
Sbjct: 371 YRPVTQNF----------------RYEAMWARAADYKEVVEKNWTEG-LNGHRDL 341

BLAST of Lag0001193 vs. NCBI nr
Match: PPE01936.1 (hypothetical protein GOBAR_DD01012 [Gossypium barbadense])

HSP 1 Score: 131.7 bits (330), Expect = 1.7e-26
Identity = 116/453 (25.61%), Postives = 189/453 (41.72%), Query Frame = 0

Query: 109 KIWNQEHTIVDKAMLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSAEAIGNLL 168
           +I N    + D+ + +    + G + D  EF     W   + LP     R +   IGN +
Sbjct: 100 RILNLMPWLFDRCLFIMVPFEKGKNFDSYEFCLSPFWLRVYSLPIEAIDRQTTLNIGNAI 159

Query: 169 GKVEKVDIREDVDPTWGCSLRVKIQIDVHIPLKRGIFLQSGSKGKKWIPVTYEKLPDFCY 228
           G++  +D + D D  W   +R+K+ I++  PL+R + L      +    + YE+LPDFCY
Sbjct: 160 GELMAIDWK-DRDGGWTEFMRIKVMINILKPLRRVVKLVDREGMETIGVIKYERLPDFCY 219

Query: 229 GCGCLGHTIKECENL---LGPNDGELRYGAWLREPIKVWSSDDSSIGRNFHGRGREETET 288
            CG +GH+ + CE+    +G N    +YG WLR PI V  + D  + RN     + +  T
Sbjct: 220 ACGLIGHSFRACESNKEGVGQNGLNYQYGGWLRVPI-VNPNQDRGMRRNGVELVKSKDHT 279

Query: 289 TTNKEHVAVEKNLPAARPDPP------VTESKT--------------------------- 348
            ++KE         +  P+        V ES +                           
Sbjct: 280 DSDKEESHTNSRGKSGLPEQKGLERLCVKESPSVSSLDRRSLKSMRDGMGRLKGCLAVNS 339

Query: 349 ---------LGKERVTVE---YSKMELEPNLDNQS-----LSG--------SKHKAEAEL 408
                    L +E VTV+   +S   ++  L  Q       +G        SKH +   L
Sbjct: 340 DGKSGGLALLWREGVTVDVQNFSNYHIDSLLSTQDGEVIWFTGFYGQADQTSKHLSWDML 399

Query: 409 VQVETSKRRIVIEENDLNARSVEAANNSEKIGGIDRSESEMRKFRDTIDVCGLMDPGFCG 468
            +V+++ +   I   D NA      NN++K GG  +S   M +FRD +D   L+D     
Sbjct: 400 RRVKSTVKEGWIVGGDFNA----ILNNTKKDGGRRKSRRSMDEFRDILDELALIDIKPTN 459

Query: 469 PMFTWLTVHHLA--KLASDHRPIIADW-----KEEPPDHGKHMIGRPKRFEEVWTKYEEC 494
             FTWL    +   +  SDH  I+ +      +EE  +H         R++  W K +E 
Sbjct: 460 GWFTWLRRDWIVVRQSKSDHEVILLNTIGNKSEEESCNHSLRF-----RYDACWAKEQEA 519

BLAST of Lag0001193 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 125.9 bits (315), Expect = 9.5e-25
Identity = 73/240 (30.42%), Postives = 119/240 (49.58%), Query Frame = 0

Query: 52  LVKHLAELHVTPAEKASIFKLPNSEIDRSGQKLKNSILCKIHTKKKINPEMFSSKMPKIW 111
           L++      +T  E      + +S ++ +G+ L+ S++CK+ +K+ I+  +  + +   W
Sbjct: 6   LLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTLKIAW 65

Query: 112 ------------------------NQEHTIV-------DKAMLLFEEPKAGVSCDDMEFR 171
                                   +  + I+       D+A+++ + P +     DM+FR
Sbjct: 66  KLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDFR 125

Query: 172 YVSLWTHFHKLPYACFSRTSAEAIGNLLGKVEKVDIREDVDPTWGCSLRVKIQIDVHIPL 231
            VSLW HF  L  AC ++T A  +GN +G  E V+   + +  WG  LRV+++ DV  PL
Sbjct: 126 NVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNAN-NFCWGSCLRVRVRFDVMKPL 185

Query: 232 KRGIFLQ-SGSKGKKWIPVTYEKLPDFCYGCGCLGHTIKECEN-LLGPNDGELRYGAWLR 259
            RGI L   G  G  WIP+ YE+LPDF Y CG L H +K+C +  +      L+YG WLR
Sbjct: 186 HRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYGPWLR 244

BLAST of Lag0001193 vs. NCBI nr
Match: XP_030924672.1 (uncharacterized protein LOC115951647 [Quercus lobata])

HSP 1 Score: 125.2 bits (313), Expect = 1.6e-24
Identity = 141/566 (24.91%), Postives = 213/566 (37.63%), Query Frame = 0

Query: 77  IDRSGQKLKNSILCKIHTKKKINPEMFSSKMPKIWNQ----EHTIVDKAMLLF------- 136
           ++ S +  K  ++ KI + K     +    + K WN     E T+VDK + +F       
Sbjct: 28  VESSSESSKKLLIGKILSNKSFPKSLVKEILVKAWNVINDIEVTVVDKNIFMFSFLHEAD 87

Query: 137 ------EEPKA-------------GVSCDDMEFRYVSLWTHFHKLPYACFSRTSAEAIGN 196
                   P                +S  +++F     W   H LP    S+ +   IG+
Sbjct: 88  VRRAWDRRPWTVKGDHLILKRFCFDISVSEVDFSTTEFWIQIHGLPLNRRSKENVLKIGS 147

Query: 197 LLGKVEKVDIREDVDPTWGCSLRVKIQIDVHIPLKRGIFLQSGSKGKKWIPVTYEKLPDF 256
           ++GK    D+       W  S+RV++++D+  PL  G  L+  +    WIP  +EKL +F
Sbjct: 148 IVGKALDTDLVGPGSGIWSKSVRVRVELDICCPLVPGFPLERDNLPVLWIPFKFEKLGNF 207

Query: 257 CYGCGCLGHTIKECENLLGPNDGELRYGAWLR------EP-IKV---------------- 316
           C+GCG LGH ++ C++L   N G   +G WLR      +P IK+                
Sbjct: 208 CFGCGLLGHDLRNCQDLGVQNCG--FFGKWLRADNDEFQPGIKLDDFHIPNRPAMMSIIP 267

Query: 317 -----------------WSSDDSSIGRNFHGRGREETETTTNKEHVAVEKNLPAARPDPP 376
                              S D  I R  HG+  E  E             L   R   P
Sbjct: 268 NSRPSVQINQSSRIQTTMGSQDEMITREAHGKREEPVEV------------LEQCRMVTP 327

Query: 377 VTESKTLGKERVTVEYSKMELEPNLDNQSLSGSKHKAE---------AELVQVETSKRRI 436
           +    T   E+VT     +ELE    ++++  +   ++         A     + SKR+ 
Sbjct: 328 LQNDGT-SLEKVTDVRLGVELEVVFSDRNMIAALVYSDPLEAPWLLFAIYGPFQRSKRKK 387

Query: 437 VIE--ENDLNARSVEAA---------NNSEKIGGIDRSESEMRKFRDTIDVCGLMDPGFC 496
             E  EN +++ S   A            EK GG   +ES +   RD +   G +D GF 
Sbjct: 388 FWELLENMVSSFSGPWAVIGDFNCIKRAKEKCGGRLVAESSVNCLRDFMLNTGAIDLGFI 447

BLAST of Lag0001193 vs. NCBI nr
Match: XP_030942000.1 (uncharacterized protein At4g02000-like [Quercus lobata])

HSP 1 Score: 124.8 bits (312), Expect = 2.1e-24
Identity = 61/147 (41.50%), Postives = 81/147 (55.10%), Query Frame = 0

Query: 119 DKAMLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSAEAIGNLLGKVEKVDIRE 178
           DK ++   +P    S DD  F Y S W   H LP    ++ +AEAIG  LG +E+VDI  
Sbjct: 95  DKYLIGLYKPMGEESVDDATFDYTSFWVQIHNLPLRQMNKVTAEAIGRTLGTIEQVDI-S 154

Query: 179 DVDPTWGCSLRVKIQIDVHIPLKRGIFLQSGSKGKKWIPVTYEKLPDFCYGCGCLGHTIK 238
                 GC LRV++QI++  PL RG  + SG    +W+   YEKLP FCY CG L H  K
Sbjct: 155 TTGECRGCYLRVRVQINITQPLCRGRMVNSGEAEPQWLAFQYEKLPIFCYWCGVLNHDEK 214

Query: 239 EC----ENLLGPNDGELRYGAWLREPI 262
           +C    +N    N  + +YGAWLR P+
Sbjct: 215 DCALWIDNGGTLNTEDQQYGAWLRAPL 240

BLAST of Lag0001193 vs. ExPASy TrEMBL
Match: A0A2N9E949 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3389 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.8e-30
Identity = 125/453 (27.59%), Postives = 180/453 (39.74%), Query Frame = 0

Query: 119 DKAMLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSAEAIGNLLGKVEKVDIRE 178
           DK ++L +          M+    S W   H+LP+   +  +A ++GN LG +E++DI E
Sbjct: 43  DKNLVLLKLFDGDQKVQGMQLTEASFWIQIHELPFKGMNEETATSVGNALGVLEEIDIPE 102

Query: 179 DVDPTWGCSLRVKIQIDVHIPLKRGIFLQSGSKGKKWIPVTYEKLPDFCYGCGCLGHTIK 238
           D   TWG  +RV+++IDV +PL R   ++ G +   W+ + YEKLP FCY CG LGH+ +
Sbjct: 103 D-GITWGEFMRVQVRIDVSMPLLRRQRVKLGKEESIWVTLKYEKLPTFCYNCGILGHSER 162

Query: 239 EC----ENLLGPNDGELRYGAWLREP-------------------------------IKV 298
           EC    ++    +     YG+WLR                                  K 
Sbjct: 163 ECRLVTQHEKSKDGNHYEYGSWLRATPGRRKTGSVTFEGAFPKRNGIVYHNQLNGGGCKA 222

Query: 299 WSSDDSSI-GRNFHGRGREETETTTNKEHVAVEKNLPAARPDPPVTESKTLGKE---RVT 358
            S    SI   N  G G      T    H  V++N P+       T  K +  E   R+T
Sbjct: 223 ASPTAMSILSWNCQGLG---NPWTVRHLHELVKENNPSIL-FLMETRMKAVEMEKTWRIT 282

Query: 359 VEYSKMELEPNLDNQSLSGSKHKAEAELVQVETSKRRIVIEENDLNARSVEAANNSEKIG 418
             Y   E    LD+  L          L  +    R   +   D N    E   NSEK+G
Sbjct: 283 GFYGCPERSGRLDSWKL----------LKHLGDQNRLPWVVIGDFN----EILGNSEKMG 342

Query: 419 GIDRSESEMRKFRDTIDVCGLMDPGFCGPMFTW--------------------------- 478
              R+ES+M  FR+ ++   L D GF G  +TW                           
Sbjct: 343 KALRAESQMASFREALEFHSLRDLGFRGQWYTWDNRRLGLENIKERLDRAVANPEWTNIF 402

Query: 479 --LTVHHLAKLASDHRPIIADWKEEPPDHGKHMIGRPK---RFEEVWTKYEECREIVEQV 500
               V HL   ASDH PI+             ++ R K   RFE+ W + E C E V++ 
Sbjct: 403 SEAGVQHLFTSASDHCPILLHL------FTSILLPRRKRQFRFEQAWCRVETCEETVKES 462

BLAST of Lag0001193 vs. ExPASy TrEMBL
Match: A0A2N9FNT0 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16695 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-29
Identity = 119/471 (25.27%), Postives = 188/471 (39.92%), Query Frame = 0

Query: 107 MPKIWNQEHTIVDKAMLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSAEAIGN 166
           + ++   E    DK +++F+  +      D  F + S W   H LP    +  +AE+IG 
Sbjct: 83  LERVLMNEPWTYDKFLVVFQRVQGDEPIQDSMFSHTSFWVQLHNLPIRRRTEEAAESIGR 142

Query: 167 LLGKVEKVDIREDVDPTWGCSLRVKIQIDVHIPLKRGIFLQSGSKGKKWIPVTYEKLPDF 226
            +G VEKV   ED      C +RV+I+++++ PL RG  ++     K W+   YE+LP+F
Sbjct: 143 SIGLVEKVAASEDERGGENC-MRVRIRLEINRPLCRGRLVKFEEGIKGWVAFRYERLPNF 202

Query: 227 CYGCGCLGHTIKEC----ENLLGPNDGELRYGAWLREPIKVWSSDDSSIGRNFHGRGREE 286
           CY CGCL H  K+C    +     N  E ++GAWL                      R  
Sbjct: 203 CYWCGCLDHGEKDCDVGIQQRQTSNKQEYQFGAWL----------------------RAT 262

Query: 287 TETTTNKEHVAVEKNLP-----AARPDPPVTESKTLGKERVTVEYSKMELEPNLDNQSLS 346
           ++   +K  V V  N P     + R DPP    K   + + TVE   +      + ++  
Sbjct: 263 SDRAPHKTVVIVPGNQPKSRDKSCRQDPPC--RKDPPQHQPTVEAEDLTRNQRENGKTTD 322

Query: 347 GSKHKAEAELVQVETSKRRIV---IEEND--------------------------LNARS 406
            ++   E E+ ++E +    +   I  +D                          LN + 
Sbjct: 323 NTEEDPENEM-EIEQNPGFPIPDRIHNSDQPWRLTCFYGAPETHLREHSWNLLRTLNGQH 382

Query: 407 V----------EAANNSEKIGGIDRSESEMRKFRDTIDVCGLMDPGFCGPMFTW------ 466
                      E   +SEK G  ++SES+M++FR  ID CG +D GF G  FTW      
Sbjct: 383 ALPWCCFGDFNEIVRSSEKSGRRNQSESQMQRFRAVIDECGFIDLGFRGLPFTWCNNRRG 442

Query: 467 -----------------------LTVHHLAKLASDHRPIIADWKEEPPDHGKHMIGRPK- 496
                                    V H+    SDH+PI  + +          + RP+ 
Sbjct: 443 NATTWLRLDRFMATNEWVLRFSSAAVDHMECTTSDHKPICLNTQPV-------QVPRPRQ 502

BLAST of Lag0001193 vs. ExPASy TrEMBL
Match: A0A2N9INH4 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54999 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.3e-29
Identity = 112/415 (26.99%), Postives = 170/415 (40.96%), Query Frame = 0

Query: 119 DKAMLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSAEAIGNLLGKVEKVDIRE 178
           DK +++FE     ++ DD+ F +V+ W   H LP    +  SA  IG  LGKVE+V  ++
Sbjct: 95  DKFLVVFERLGEDINVDDLLFSHVTFWVQIHNLPVRRMTEESAAVIGKTLGKVERVADKD 154

Query: 179 DVDPTWGCSLRVKIQIDVHIPLKRGIFLQSGSKGKKWIPVTYEKLPDFCYGCGCLGHTIK 238
           D      C +RV++++DV IPL RG  ++     K WI   YE+LP+FCY CGCL H  K
Sbjct: 155 DERGGENC-MRVQVRLDVTIPLCRGRMIKMEEGKKSWIAFRYERLPNFCYLCGCLDHAEK 214

Query: 239 ECENLLGP----NDGELRYGAWLREPIKVWSSDDSSIGRNFHGRGREETETTTNKEHVAV 298
           +C++ L      +    +YGAW+R                                    
Sbjct: 215 DCDDGLKKKNVVSSEGFQYGAWMR------------------------------------ 274

Query: 299 EKNLPAARPDPPVTESKTLGKERVTVEYSKMELEPNLD-NQSLSGSKHKAEAELVQVETS 358
                A    PP    KT+    +  ++S  +L  ++   +  S   H    EL + + S
Sbjct: 275 -----AEMDRPP---RKTMIVSLMATQHSHGDLHASMGLLKHTSVRIHGTSFELSRSQFS 334

Query: 359 KRRIVIEENDLNARSVEAANNSEKIGGIDRSESEMRKFRDTIDVCGLMDPGFCGPMFTW- 418
                    D N    E    SE IG   R++ +M+ FR+ ID C  +D G+ G  FTW 
Sbjct: 335 LPWCC--TGDFN----EIVRCSESIGRRSRNDRQMQGFRNVIDDCEFLDLGYRGLPFTWC 394

Query: 419 ----------------------------LTVHHLAKLASDHRPIIADWKEEPPDHGKHMI 478
                                       + V+HL    SDH+PI   W    P   +   
Sbjct: 395 NNRRGEATTWLRLDRFMTTNEWLMHFHSVVVYHLECTESDHKPI---WLTTAPMQSQRPK 452

Query: 479 GRPKRFEEVWTKYEECREIVEQVWKSGDRNGRGDLLEKTKMCLSRLGQ----WSR 496
            +  RF+E+W     C E + + W       RG  + + +  + R G+    WSR
Sbjct: 455 PKLFRFKEMWRTEVGCEETITKAWVP---KVRGSPMVQVQDMIHRCGKDLTAWSR 452

BLAST of Lag0001193 vs. ExPASy TrEMBL
Match: A0A2N9G8F2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23724 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-27
Identity = 127/547 (23.22%), Postives = 211/547 (38.57%), Query Frame = 0

Query: 70  FKLPNSEIDR-----SGQKLKNSILCKIHTKKKINPEMFSSKMPKIWNQEHTIVDKAMLL 129
           F L + E D+       Q+ K ++  K  T++ IN E       ++   E    DK ++ 
Sbjct: 11  FSLQDQEDDKFDLSSMTQQNKPTLAAKFFTRRTINVE------ARVLLGEPWSYDKYLIA 70

Query: 130 FEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSAEAIGNLLGKVEKVDIREDVDPTW 189
           F+    G + +D++F+ V+ W   H LP  C  +T AE +G  +G V +    +D D   
Sbjct: 71  FQRVGDGEAVEDLQFKMVAFWVQIHNLPIMCMKKTVAEMLGKSIGAVIRTQ-DQDEDSGS 130

Query: 190 GCSLRVKIQIDVHIPLKRGIFLQSGSKGKKWIPVTYEKLPDFCYGCGCLGHTIKECENLL 249
           G  +RV++Q+D+  PL RG  +   + G  W    YE+LP+FCY CG   H  K+CE  L
Sbjct: 131 GRWMRVRVQVDISKPLIRGRRIGLANGGDGWASFQYERLPNFCYWCGIPTHGEKDCEAWL 190

Query: 250 ----GPNDGELRYGAWLR-EPIKVWSSDDSSI-GRNFHGRGREETETTTNKEHVA----- 309
                  D E  YG WLR  P +V      ++ GR+ + R  ++T+     E        
Sbjct: 191 NTPEAEKDKEPEYGLWLRASPERVLRRVQVTVEGRSRNTRTADKTKLNGPAEVFGPAGPI 250

Query: 310 ---VEKNLPAARPDPP---VTESKTLGKERVTV----EYSKMELEPNLDNQSLSGSKHKA 369
               + +L    P  P   +T ++ +   +  V    + ++ + + + D +    ++ +A
Sbjct: 251 MPKTKASLSTKDPRSPLGNITNNRDVTSPKPNVGTWKKMARAKGQVSQDTRKFIVAEKRA 310

Query: 370 EAELVQVETSKRR-------------IVIEENDLNARSVEAANNSEKIGGI--------- 429
             E++Q+E    R             +    N ++A   E    + ++ G+         
Sbjct: 311 CDEVMQIEEEDMRSLKTARGQFKNLPVCYSSNHIDAIINEGTEKAWRLTGVYGVPETHRR 370

Query: 430 -------------------------------------DRSESEMRKFRDTIDVCGLMDPG 489
                                                 R + +MR FR  +D CGL+D  
Sbjct: 371 EETWTLLRHLDNMIQLPWCCIGDFNEIVKLEEMKGRLARPDCQMRSFRSALDDCGLVDLR 430

Query: 490 FCGPMFTWLT-----------------------------VHHLAKLASDHRPIIADWKEE 502
           + G  FTW                               V HL    SDH+ +  +    
Sbjct: 431 YRGFPFTWCNNRDPPFTTWVRLDRAVANIDWLHQFPMARVEHLDVSKSDHKCLWLNCSPS 490

BLAST of Lag0001193 vs. ExPASy TrEMBL
Match: A0A2N9IPY7 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53943 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.7e-25
Identity = 124/516 (24.03%), Postives = 192/516 (37.21%), Query Frame = 0

Query: 119 DKAMLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSAEAIGNLLGKVEKVDIRE 178
           DK++++F+        +D  F +VS W   H LP    +  +A  IG  +G+VEKV  R+
Sbjct: 15  DKSLVVFQRLMEDGPINDTLFSHVSFWVQLHNLPIQHMTEEAAITIGKSIGEVEKVAARD 74

Query: 179 DVDPTWGCSLRVKIQIDVHIPLKRGIFLQSGSKGKKWIPVTYEKLPDFCYGCGCLGHTIK 238
           D      C +R+++++DV  PL R   ++     K+W+   YE+LP+FCY CG   H  K
Sbjct: 75  DERGGENC-IRIRVRMDVMRPLCRERMVKMEEGKKRWVAFRYERLPNFCYWCGLFDHGEK 134

Query: 239 ECENLLGPNDG----ELRYGAWLREPIKVWSSDDSSIGRNFHGRGRE------------E 298
           +C+  L         E ++GAWLR          + +      RGRE            E
Sbjct: 135 DCDIGLRQRHADSVEEFQFGAWLRASSDRPPPKTAVMVSGILPRGREKPPNEPRRNPTPE 194

Query: 299 TETTTNKEH----------------VAVEKNLPAARPDPP--------------VTESKT 358
           T       H                + VE+N       PP              + ++  
Sbjct: 195 TSEPQASPHRHNQVPDSMQPDLETDMEVEQNPGITDCTPPRKSTMDLFNAQICEIDQAIN 254

Query: 359 LGKERVTVEYSKMELEPNLDNQSLSGSKHKAE----------------AELVQVE----- 418
              E+VT+E     L  N  +Q  + +   A+                A+LV+++     
Sbjct: 255 YIPEKVTIEEQNPVLVHNFPSQLNAITTPCAQLMQPESTPRPPLVQELAQLVRLKDPSVL 314

Query: 419 ------TSKRRIVI-------------------EENDLNARSV----------------E 478
                 T + R+ +                    EN  N                    E
Sbjct: 315 FLSETWTDEDRLEVLRSNPWRFICFYGAPETHLRENSWNLLRTLKNQHNLPWCCVGDFNE 374

Query: 479 AANNSEKIGGIDRSESEMRKFRDTIDVCGLMDPGFCGPMFTWLT---------------- 497
              NSEK G  ++SE +M+ F++ ID CG +D GF G  FTW                  
Sbjct: 375 IIRNSEKSGRRNQSERQMQGFKNVIDECGFIDLGFRGFPFTWCNNKRGSATTWLRLDRFM 434

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CAD6267426.11.3e-2928.73unnamed protein product [Miscanthus lutarioriparius][more]
PPE01936.11.7e-2625.61hypothetical protein GOBAR_DD01012 [Gossypium barbadense][more]
XP_022132681.19.5e-2530.42uncharacterized protein LOC111005481 [Momordica charantia][more]
XP_030924672.11.6e-2424.91uncharacterized protein LOC115951647 [Quercus lobata][more]
XP_030942000.12.1e-2441.50uncharacterized protein At4g02000-like [Quercus lobata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9E9494.8e-3027.59CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3389... [more]
A0A2N9FNT01.1e-2925.27RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16695 ... [more]
A0A2N9INH45.3e-2926.99Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9G8F21.3e-2723.22Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23724 PE=4 SV=1[more]
A0A2N9IPY72.7e-2524.03Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 118..191
e-value: 4.0E-7
score: 29.6
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 194..241
e-value: 5.1E-11
score: 42.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..297
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 272..311
NoneNo IPR availablePANTHERPTHR31286:SF62SUBFAMILY NOT NAMEDcoord: 140..380
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 140..380
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 227..242
score: 8.878027
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 363..432

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0001193.1Lag0001193.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding