Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCCGGCGGCAGTGAGCAGTGGCCGGCCGCCGGAGATTTGAAGAAGAAGAAGGAAGAGGTTGGGGGAAGAGGATGAAGAAGAGAGGAAGAAGAGAGAGATTTAAAAATAATTAAAATAATAATATTTTATTGTTTTTATTTATTTTTATTTTAAAATTTAAAAAAAAAGAATTTTTTAATTAAAAAAATGTGGCCACGTCAGCAGTCTGTTAGCATTTAAGGCAAACTGGATGGCAGGGACCAAAATGCTGCTTATCTCAAACCTCAGGGGTATTTTTGTTGAGTTTTAGAACTCAGGGACCAAAGTGTAACTTAACCCAAACCTCAGGGACCAAAAGTGTATTTTTCCCTAATTTTAATATATAGTTTCAATATGAATCTAATTCATATTAAATTTAATATTTGATCAAATATTAAATTTTCCCATAAATTAATTTTGAATCTAAAAAATAATGTCAACAAGGTTCTCTGTTTTTCTCTCTAGAGAAACAGTAGAAGACGGCGACCATTGTGCTGAGTTGGGCGGTGAATATACCGATCCTGGTGCAGCTTAGGTTGCAGTTGGTGTGTATTGTTGCTGTATTTTGTGCATCGAGAAGGTTGGTGGTGTTTACAATGTCCATGGGGGAGGAAGATAAGCTGGTGAAGCATCTAGCAGAGCTTCATGTTACTCCTGCGGAAAAGGCCAGCATTTTCAAATTACCTAATAGTGAGATAGATCGTTCGGGGCAGAAATTGAAGAATTCCATCTTGTGCAAAATACATACAAAGAAGAAAATAAATCCTGAAATGTTTAGTTCCAAGATGCCGAAGATATGGAACCAAGAACACACGATCGTTGATAAGGTGGGATTCAATATTTTCATATGCAAATTAAAAATGCGAAAATTAAAGGATGGATCTTGGAGTCGGGACCATGGTTTTACGACAAGGCCATGCTTTTATTCGAGGAGCCCAAGGCGGGGGTTAGTTGCGACGACATGGAATTCAGGTATGTATCTCTATGGACTCACTTTCATAAGTTACCATATGCTTGCTTTTCTAGGACATCAGCGGAAGCTATTGGTAATCTGCTTGGGAAAGTAGAAAAAGTGGATATACGAGAAGATGTGGATCCAACTTGGGGATGTTCATTACGGGTTAAAATTCAGATTGATGTTCATATTCCGCTAAAAAGAGGTATTTTTTTGCAATCAGGGAGTAAGGGGAAAAAATGGATCCCAGTTACGTATGAAAAATTACCGGATTTTTGTTATGGTTGCGGTTGTTTGGGTCACACCATTAAGGAGTGTGAAAACTTATTGGGACCAAATGATGGTGAACTACGATATGGTGCATGGTTAAGAGAACCTATAAAGGTATGGAGCTCCGACGACAGTTCAATAGGAAGAAATTTCCATGGCCGAGGAAGAGGTAGCTCCTGGGGGGGGGGGGGTAGAGGACGGGGTCGGGCAGAGGTTTTCGATAATGGGATGAAGAGGAAACTGAAACGACAACAAACAAGGAACATGTTGCGGTGGAAAAAAACTTGCCGGCGGCAAGACCAGATCCGCCGGTGACCGAATCCAAGACGTTAGGAAAGGAAAGAGTAACGGTTGAGTATTCGAAAATGGAGTTAGAGCCAAATTTGGTAAGTGATGATTTAGGAAAGATTTGTTCCAACGGGAAAGAGAAAAATATTAAGACAAAGGAAAGTAATTATGAAAGGAATATTTTAGGCAGTGACCAAAAGCTGGAAGTTTTGCAGAATGTTAATGATGATTTAATGATGAAGAATAAAGAAGAATTAATGAGGATTCTCATTCAATGGAGATGAAGCCTTTGCAAACGGTGCAAGAAAAAAAATTGGAAATTTGAATTTGGTAGTTTCTAAGAATGATAAATTGAAAAAGGTTGAGTTGGTGATGGAGCCTTTAATACAGGAAGAATTTTTGCCGAAGGATGGTAGTAAATTTAAAAAGTGGAAGAGAGTCCTAAGGGGGAACGTCATTTGGAAACATACATACAGGACAACCAATCTCTAAGTGGGTCAAAACATAAAGCTGAAGCGGAGCTGGTACAGGTGGAAACAAGTAAACGACGAATAGTGATTGAGGAGAATGATTTAAATGCGCGATCGGTGGAGGCTGCGAGTTAGCCCCGCCGGGCACAATGAAAATCCTAAGTTGGAATGTCCAGGGTTTGGGGAACCCTAGGACATTAAGAGTGCTTAGGCACATTATTAAAACACATGGTCCCCAAATGGTTTTTTAATGGAAACCAAGCTTAAAAAAAACATTAGTGACAGAATTAGAAGTCAACTCAAATTTGATTGTGGTATCGAGGTTCCATGTCAAGGTCTGAGCGATGGGTTGCTTCTCCTTTGGATGCATGATATTAATGTCATTCTTCGTTCCTATTCTAAGGGCACATTGATGTGTGTGTTAAGGAGAAAGATTGGTCTTGGAGGTTTACGGGAATAATATATGGTAATCCTGTGAGAAATTTACATAAGGAAACGTGGGCTCTTATGCAGCGTCTGTGAGATCACACGAATTTACCTTGGGTACTTGTTGGTGACTTTAATGAAATAACAGATAATTCTGAGAAGATAGGAGGCATTGATAGGAGTGAATCTGAGATGAGGAAATTTAGGGACACAATTGATGTTTGCGGTCTAATGGATCCGGGTTTCTGTGGGCCAATGTTCACTTGGTGCAATAATCATGTCAGTCAAGATATTATTTGGGCAAGACTTGAGGTTCCTAATTAACTATCCGATGATGTGTAAACGTAGCAGGCTGACGGTCCACCATCTAGCTAAATTGGCCTCGGATCATAGACCAATCATTGCTGATTGGAAGGAAGAGCCACCAGACCATGGTAAACATATGATTGGTCGACCTAAACGGTTTGAGGAGGTATGGACAAAATATGAAGAGTGTAGAGAGATTGTGGAGCAAGTCTGGAAAAGTGGTGATAGGAATGGAAGGGGAGATCTTTTGGAAAAAACCAAGATGTGTTTGAGCCGCCTGGGTCAATGGAGTAGAGAAAATATGAGGGATCTATAA
mRNA sequence
ATGGCGGCCGGCGGCAGTGAGCAGTGGCCGGCCGCCGGAGATTTGAAGAAGAAGAAGGAAGAGCTTAGGTTGCAGTTGGTGTGTATTGTTGCTGTATTTTGTGCATCGAGAAGGTTGGTGGTGTTTACAATGTCCATGGGGGAGGAAGATAAGCTGGTGAAGCATCTAGCAGAGCTTCATGTTACTCCTGCGGAAAAGGCCAGCATTTTCAAATTACCTAATAGTGAGATAGATCGTTCGGGGCAGAAATTGAAGAATTCCATCTTGTGCAAAATACATACAAAGAAGAAAATAAATCCTGAAATGTTTAGTTCCAAGATGCCGAAGATATGGAACCAAGAACACACGATCGTTGATAAGGCCATGCTTTTATTCGAGGAGCCCAAGGCGGGGGTTAGTTGCGACGACATGGAATTCAGGTATGTATCTCTATGGACTCACTTTCATAAGTTACCATATGCTTGCTTTTCTAGGACATCAGCGGAAGCTATTGGTAATCTGCTTGGGAAAGTAGAAAAAGTGGATATACGAGAAGATGTGGATCCAACTTGGGGATGTTCATTACGGGTTAAAATTCAGATTGATGTTCATATTCCGCTAAAAAGAGGTATTTTTTTGCAATCAGGGAGTAAGGGGAAAAAATGGATCCCAGTTACGTATGAAAAATTACCGGATTTTTGTTATGGTTGCGGTTGTTTGGGTCACACCATTAAGGAGTGTGAAAACTTATTGGGACCAAATGATGGTGAACTACGATATGGTGCATGGTTAAGAGAACCTATAAAGGTATGGAGCTCCGACGACAGTTCAATAGGAAGAAATTTCCATGGCCGAGGAAGAGAGGAAACTGAAACGACAACAAACAAGGAACATGTTGCGGTGGAAAAAAACTTGCCGGCGGCAAGACCAGATCCGCCGGTGACCGAATCCAAGACGTTAGGAAAGGAAAGAGTAACGGTTGAGTATTCGAAAATGGAGTTAGAGCCAAATTTGGACAACCAATCTCTAAGTGGGTCAAAACATAAAGCTGAAGCGGAGCTGGTACAGGTGGAAACAAGTAAACGACGAATAGTGATTGAGGAGAATGATTTAAATGCGCGATCGGTGGAGGCTGCGAATAATTCTGAGAAGATAGGAGGCATTGATAGGAGTGAATCTGAGATGAGGAAATTTAGGGACACAATTGATGTTTGCGGTCTAATGGATCCGGGTTTCTGTGGGCCAATGTTCACTTGGCTGACGGTCCACCATCTAGCTAAATTGGCCTCGGATCATAGACCAATCATTGCTGATTGGAAGGAAGAGCCACCAGACCATGGTAAACATATGATTGGTCGACCTAAACGGTTTGAGGAGGTATGGACAAAATATGAAGAGTGTAGAGAGATTGTGGAGCAAGTCTGGAAAAGTGGTGATAGGAATGGAAGGGGAGATCTTTTGGAAAAAACCAAGATGTGTTTGAGCCGCCTGGGTCAATGGAGTAGAGAAAATATGAGGGATCTATAA
Coding sequence (CDS)
ATGGCGGCCGGCGGCAGTGAGCAGTGGCCGGCCGCCGGAGATTTGAAGAAGAAGAAGGAAGAGCTTAGGTTGCAGTTGGTGTGTATTGTTGCTGTATTTTGTGCATCGAGAAGGTTGGTGGTGTTTACAATGTCCATGGGGGAGGAAGATAAGCTGGTGAAGCATCTAGCAGAGCTTCATGTTACTCCTGCGGAAAAGGCCAGCATTTTCAAATTACCTAATAGTGAGATAGATCGTTCGGGGCAGAAATTGAAGAATTCCATCTTGTGCAAAATACATACAAAGAAGAAAATAAATCCTGAAATGTTTAGTTCCAAGATGCCGAAGATATGGAACCAAGAACACACGATCGTTGATAAGGCCATGCTTTTATTCGAGGAGCCCAAGGCGGGGGTTAGTTGCGACGACATGGAATTCAGGTATGTATCTCTATGGACTCACTTTCATAAGTTACCATATGCTTGCTTTTCTAGGACATCAGCGGAAGCTATTGGTAATCTGCTTGGGAAAGTAGAAAAAGTGGATATACGAGAAGATGTGGATCCAACTTGGGGATGTTCATTACGGGTTAAAATTCAGATTGATGTTCATATTCCGCTAAAAAGAGGTATTTTTTTGCAATCAGGGAGTAAGGGGAAAAAATGGATCCCAGTTACGTATGAAAAATTACCGGATTTTTGTTATGGTTGCGGTTGTTTGGGTCACACCATTAAGGAGTGTGAAAACTTATTGGGACCAAATGATGGTGAACTACGATATGGTGCATGGTTAAGAGAACCTATAAAGGTATGGAGCTCCGACGACAGTTCAATAGGAAGAAATTTCCATGGCCGAGGAAGAGAGGAAACTGAAACGACAACAAACAAGGAACATGTTGCGGTGGAAAAAAACTTGCCGGCGGCAAGACCAGATCCGCCGGTGACCGAATCCAAGACGTTAGGAAAGGAAAGAGTAACGGTTGAGTATTCGAAAATGGAGTTAGAGCCAAATTTGGACAACCAATCTCTAAGTGGGTCAAAACATAAAGCTGAAGCGGAGCTGGTACAGGTGGAAACAAGTAAACGACGAATAGTGATTGAGGAGAATGATTTAAATGCGCGATCGGTGGAGGCTGCGAATAATTCTGAGAAGATAGGAGGCATTGATAGGAGTGAATCTGAGATGAGGAAATTTAGGGACACAATTGATGTTTGCGGTCTAATGGATCCGGGTTTCTGTGGGCCAATGTTCACTTGGCTGACGGTCCACCATCTAGCTAAATTGGCCTCGGATCATAGACCAATCATTGCTGATTGGAAGGAAGAGCCACCAGACCATGGTAAACATATGATTGGTCGACCTAAACGGTTTGAGGAGGTATGGACAAAATATGAAGAGTGTAGAGAGATTGTGGAGCAAGTCTGGAAAAGTGGTGATAGGAATGGAAGGGGAGATCTTTTGGAAAAAACCAAGATGTGTTTGAGCCGCCTGGGTCAATGGAGTAGAGAAAATATGAGGGATCTATAA
Protein sequence
MAAGGSEQWPAAGDLKKKKEELRLQLVCIVAVFCASRRLVVFTMSMGEEDKLVKHLAELHVTPAEKASIFKLPNSEIDRSGQKLKNSILCKIHTKKKINPEMFSSKMPKIWNQEHTIVDKAMLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSAEAIGNLLGKVEKVDIREDVDPTWGCSLRVKIQIDVHIPLKRGIFLQSGSKGKKWIPVTYEKLPDFCYGCGCLGHTIKECENLLGPNDGELRYGAWLREPIKVWSSDDSSIGRNFHGRGREETETTTNKEHVAVEKNLPAARPDPPVTESKTLGKERVTVEYSKMELEPNLDNQSLSGSKHKAEAELVQVETSKRRIVIEENDLNARSVEAANNSEKIGGIDRSESEMRKFRDTIDVCGLMDPGFCGPMFTWLTVHHLAKLASDHRPIIADWKEEPPDHGKHMIGRPKRFEEVWTKYEECREIVEQVWKSGDRNGRGDLLEKTKMCLSRLGQWSRENMRDL
Homology
BLAST of Lag0001193 vs. NCBI nr
Match:
CAD6267426.1 (unnamed protein product [Miscanthus lutarioriparius])
HSP 1 Score: 142.1 bits (357), Expect = 1.3e-29
Identity = 102/355 (28.73%), Postives = 161/355 (45.35%), Query Frame = 0
Query: 130 AGVSCDDMEFRYVSLWTHFHKLPYACFSRTSAEAIGNLLGKVEKVDIREDVDPTWGCSLR 189
A V D+ F ++S+W + +PY + I +G VEK+D+ +D D WG LR
Sbjct: 71 ASVRPSDIYFDHMSIWVRIYNIPYGLMNGKWGYVIAKKIGPVEKLDV-DDQDRAWGAYLR 130
Query: 190 VKIQIDVHIPLKRGIFLQSGSKG-KKWIPVTYEKLPDFCYGCGCLGHTIKECENLLGP-- 249
K+QI++ PL RG+ + S + K+W V YEKLP++CY CG +GH+ EC L P
Sbjct: 131 AKVQINITKPLMRGVSIFSTKRQVKEWYEVRYEKLPNYCYSCGIIGHSSVEC---LTPAE 190
Query: 250 --NDGELRYGAWLREPIKVWSSDDSSIGRNFHGRGREETETTTNKEHVAVEKNLPAARPD 309
DG L Y LR P DD R + ++ + ++ K+
Sbjct: 191 RDADGMLPYSGDLRVP------DD---------RKKRPSDDVNGQSSISAGKS------- 250
Query: 310 PPVTESKTLGKERVTVEYSKMELEPNLDNQSLSGSKHKAEAELVQVETSKRRIVIEENDL 369
T G+E S+SG+ + + T ++ + D
Sbjct: 251 -----GGTSGQE------------------SMSGA--------IDLRTLNNQV---KRDF 310
Query: 370 NARSVEAANNSEKIGGIDRSESEMRKFRDTIDVCGLMDPGFCGPMFTWLTVHHLAKLASD 429
N EA ++ E +G R ES+M+ FR+ ++ CGL+D GF GP FTW ++ D
Sbjct: 311 N----EALSSDEHLGRTGRGESQMKLFRECLENCGLLDLGFSGPKFTW---NNRGGDTKD 341
Query: 430 HRPIIADWKEEPPDHGKHMIGRPKRFEEVWTKYEECREIVEQVWKSGDRNGRGDL 480
+RP+ ++ R+E +W + + +E+VE+ W G NG DL
Sbjct: 371 YRPVTQNF----------------RYEAMWARAADYKEVVEKNWTEG-LNGHRDL 341
BLAST of Lag0001193 vs. NCBI nr
Match:
PPE01936.1 (hypothetical protein GOBAR_DD01012 [Gossypium barbadense])
HSP 1 Score: 131.7 bits (330), Expect = 1.7e-26
Identity = 116/453 (25.61%), Postives = 189/453 (41.72%), Query Frame = 0
Query: 109 KIWNQEHTIVDKAMLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSAEAIGNLL 168
+I N + D+ + + + G + D EF W + LP R + IGN +
Sbjct: 100 RILNLMPWLFDRCLFIMVPFEKGKNFDSYEFCLSPFWLRVYSLPIEAIDRQTTLNIGNAI 159
Query: 169 GKVEKVDIREDVDPTWGCSLRVKIQIDVHIPLKRGIFLQSGSKGKKWIPVTYEKLPDFCY 228
G++ +D + D D W +R+K+ I++ PL+R + L + + YE+LPDFCY
Sbjct: 160 GELMAIDWK-DRDGGWTEFMRIKVMINILKPLRRVVKLVDREGMETIGVIKYERLPDFCY 219
Query: 229 GCGCLGHTIKECENL---LGPNDGELRYGAWLREPIKVWSSDDSSIGRNFHGRGREETET 288
CG +GH+ + CE+ +G N +YG WLR PI V + D + RN + + T
Sbjct: 220 ACGLIGHSFRACESNKEGVGQNGLNYQYGGWLRVPI-VNPNQDRGMRRNGVELVKSKDHT 279
Query: 289 TTNKEHVAVEKNLPAARPDPP------VTESKT--------------------------- 348
++KE + P+ V ES +
Sbjct: 280 DSDKEESHTNSRGKSGLPEQKGLERLCVKESPSVSSLDRRSLKSMRDGMGRLKGCLAVNS 339
Query: 349 ---------LGKERVTVE---YSKMELEPNLDNQS-----LSG--------SKHKAEAEL 408
L +E VTV+ +S ++ L Q +G SKH + L
Sbjct: 340 DGKSGGLALLWREGVTVDVQNFSNYHIDSLLSTQDGEVIWFTGFYGQADQTSKHLSWDML 399
Query: 409 VQVETSKRRIVIEENDLNARSVEAANNSEKIGGIDRSESEMRKFRDTIDVCGLMDPGFCG 468
+V+++ + I D NA NN++K GG +S M +FRD +D L+D
Sbjct: 400 RRVKSTVKEGWIVGGDFNA----ILNNTKKDGGRRKSRRSMDEFRDILDELALIDIKPTN 459
Query: 469 PMFTWLTVHHLA--KLASDHRPIIADW-----KEEPPDHGKHMIGRPKRFEEVWTKYEEC 494
FTWL + + SDH I+ + +EE +H R++ W K +E
Sbjct: 460 GWFTWLRRDWIVVRQSKSDHEVILLNTIGNKSEEESCNHSLRF-----RYDACWAKEQEA 519
BLAST of Lag0001193 vs. NCBI nr
Match:
XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])
HSP 1 Score: 125.9 bits (315), Expect = 9.5e-25
Identity = 73/240 (30.42%), Postives = 119/240 (49.58%), Query Frame = 0
Query: 52 LVKHLAELHVTPAEKASIFKLPNSEIDRSGQKLKNSILCKIHTKKKINPEMFSSKMPKIW 111
L++ +T E + +S ++ +G+ L+ S++CK+ +K+ I+ + + + W
Sbjct: 6 LLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTLKIAW 65
Query: 112 ------------------------NQEHTIV-------DKAMLLFEEPKAGVSCDDMEFR 171
+ + I+ D+A+++ + P + DM+FR
Sbjct: 66 KLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDFR 125
Query: 172 YVSLWTHFHKLPYACFSRTSAEAIGNLLGKVEKVDIREDVDPTWGCSLRVKIQIDVHIPL 231
VSLW HF L AC ++T A +GN +G E V+ + + WG LRV+++ DV PL
Sbjct: 126 NVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNAN-NFCWGSCLRVRVRFDVMKPL 185
Query: 232 KRGIFLQ-SGSKGKKWIPVTYEKLPDFCYGCGCLGHTIKECEN-LLGPNDGELRYGAWLR 259
RGI L G G WIP+ YE+LPDF Y CG L H +K+C + + L+YG WLR
Sbjct: 186 HRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYGPWLR 244
BLAST of Lag0001193 vs. NCBI nr
Match:
XP_030924672.1 (uncharacterized protein LOC115951647 [Quercus lobata])
HSP 1 Score: 125.2 bits (313), Expect = 1.6e-24
Identity = 141/566 (24.91%), Postives = 213/566 (37.63%), Query Frame = 0
Query: 77 IDRSGQKLKNSILCKIHTKKKINPEMFSSKMPKIWNQ----EHTIVDKAMLLF------- 136
++ S + K ++ KI + K + + K WN E T+VDK + +F
Sbjct: 28 VESSSESSKKLLIGKILSNKSFPKSLVKEILVKAWNVINDIEVTVVDKNIFMFSFLHEAD 87
Query: 137 ------EEPKA-------------GVSCDDMEFRYVSLWTHFHKLPYACFSRTSAEAIGN 196
P +S +++F W H LP S+ + IG+
Sbjct: 88 VRRAWDRRPWTVKGDHLILKRFCFDISVSEVDFSTTEFWIQIHGLPLNRRSKENVLKIGS 147
Query: 197 LLGKVEKVDIREDVDPTWGCSLRVKIQIDVHIPLKRGIFLQSGSKGKKWIPVTYEKLPDF 256
++GK D+ W S+RV++++D+ PL G L+ + WIP +EKL +F
Sbjct: 148 IVGKALDTDLVGPGSGIWSKSVRVRVELDICCPLVPGFPLERDNLPVLWIPFKFEKLGNF 207
Query: 257 CYGCGCLGHTIKECENLLGPNDGELRYGAWLR------EP-IKV---------------- 316
C+GCG LGH ++ C++L N G +G WLR +P IK+
Sbjct: 208 CFGCGLLGHDLRNCQDLGVQNCG--FFGKWLRADNDEFQPGIKLDDFHIPNRPAMMSIIP 267
Query: 317 -----------------WSSDDSSIGRNFHGRGREETETTTNKEHVAVEKNLPAARPDPP 376
S D I R HG+ E E L R P
Sbjct: 268 NSRPSVQINQSSRIQTTMGSQDEMITREAHGKREEPVEV------------LEQCRMVTP 327
Query: 377 VTESKTLGKERVTVEYSKMELEPNLDNQSLSGSKHKAE---------AELVQVETSKRRI 436
+ T E+VT +ELE ++++ + ++ A + SKR+
Sbjct: 328 LQNDGT-SLEKVTDVRLGVELEVVFSDRNMIAALVYSDPLEAPWLLFAIYGPFQRSKRKK 387
Query: 437 VIE--ENDLNARSVEAA---------NNSEKIGGIDRSESEMRKFRDTIDVCGLMDPGFC 496
E EN +++ S A EK GG +ES + RD + G +D GF
Sbjct: 388 FWELLENMVSSFSGPWAVIGDFNCIKRAKEKCGGRLVAESSVNCLRDFMLNTGAIDLGFI 447
BLAST of Lag0001193 vs. NCBI nr
Match:
XP_030942000.1 (uncharacterized protein At4g02000-like [Quercus lobata])
HSP 1 Score: 124.8 bits (312), Expect = 2.1e-24
Identity = 61/147 (41.50%), Postives = 81/147 (55.10%), Query Frame = 0
Query: 119 DKAMLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSAEAIGNLLGKVEKVDIRE 178
DK ++ +P S DD F Y S W H LP ++ +AEAIG LG +E+VDI
Sbjct: 95 DKYLIGLYKPMGEESVDDATFDYTSFWVQIHNLPLRQMNKVTAEAIGRTLGTIEQVDI-S 154
Query: 179 DVDPTWGCSLRVKIQIDVHIPLKRGIFLQSGSKGKKWIPVTYEKLPDFCYGCGCLGHTIK 238
GC LRV++QI++ PL RG + SG +W+ YEKLP FCY CG L H K
Sbjct: 155 TTGECRGCYLRVRVQINITQPLCRGRMVNSGEAEPQWLAFQYEKLPIFCYWCGVLNHDEK 214
Query: 239 EC----ENLLGPNDGELRYGAWLREPI 262
+C +N N + +YGAWLR P+
Sbjct: 215 DCALWIDNGGTLNTEDQQYGAWLRAPL 240
BLAST of Lag0001193 vs. ExPASy TrEMBL
Match:
A0A2N9E949 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3389 PE=4 SV=1)
HSP 1 Score: 142.5 bits (358), Expect = 4.8e-30
Identity = 125/453 (27.59%), Postives = 180/453 (39.74%), Query Frame = 0
Query: 119 DKAMLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSAEAIGNLLGKVEKVDIRE 178
DK ++L + M+ S W H+LP+ + +A ++GN LG +E++DI E
Sbjct: 43 DKNLVLLKLFDGDQKVQGMQLTEASFWIQIHELPFKGMNEETATSVGNALGVLEEIDIPE 102
Query: 179 DVDPTWGCSLRVKIQIDVHIPLKRGIFLQSGSKGKKWIPVTYEKLPDFCYGCGCLGHTIK 238
D TWG +RV+++IDV +PL R ++ G + W+ + YEKLP FCY CG LGH+ +
Sbjct: 103 D-GITWGEFMRVQVRIDVSMPLLRRQRVKLGKEESIWVTLKYEKLPTFCYNCGILGHSER 162
Query: 239 EC----ENLLGPNDGELRYGAWLREP-------------------------------IKV 298
EC ++ + YG+WLR K
Sbjct: 163 ECRLVTQHEKSKDGNHYEYGSWLRATPGRRKTGSVTFEGAFPKRNGIVYHNQLNGGGCKA 222
Query: 299 WSSDDSSI-GRNFHGRGREETETTTNKEHVAVEKNLPAARPDPPVTESKTLGKE---RVT 358
S SI N G G T H V++N P+ T K + E R+T
Sbjct: 223 ASPTAMSILSWNCQGLG---NPWTVRHLHELVKENNPSIL-FLMETRMKAVEMEKTWRIT 282
Query: 359 VEYSKMELEPNLDNQSLSGSKHKAEAELVQVETSKRRIVIEENDLNARSVEAANNSEKIG 418
Y E LD+ L L + R + D N E NSEK+G
Sbjct: 283 GFYGCPERSGRLDSWKL----------LKHLGDQNRLPWVVIGDFN----EILGNSEKMG 342
Query: 419 GIDRSESEMRKFRDTIDVCGLMDPGFCGPMFTW--------------------------- 478
R+ES+M FR+ ++ L D GF G +TW
Sbjct: 343 KALRAESQMASFREALEFHSLRDLGFRGQWYTWDNRRLGLENIKERLDRAVANPEWTNIF 402
Query: 479 --LTVHHLAKLASDHRPIIADWKEEPPDHGKHMIGRPK---RFEEVWTKYEECREIVEQV 500
V HL ASDH PI+ ++ R K RFE+ W + E C E V++
Sbjct: 403 SEAGVQHLFTSASDHCPILLHL------FTSILLPRRKRQFRFEQAWCRVETCEETVKES 462
BLAST of Lag0001193 vs. ExPASy TrEMBL
Match:
A0A2N9FNT0 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16695 PE=4 SV=1)
HSP 1 Score: 141.4 bits (355), Expect = 1.1e-29
Identity = 119/471 (25.27%), Postives = 188/471 (39.92%), Query Frame = 0
Query: 107 MPKIWNQEHTIVDKAMLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSAEAIGN 166
+ ++ E DK +++F+ + D F + S W H LP + +AE+IG
Sbjct: 83 LERVLMNEPWTYDKFLVVFQRVQGDEPIQDSMFSHTSFWVQLHNLPIRRRTEEAAESIGR 142
Query: 167 LLGKVEKVDIREDVDPTWGCSLRVKIQIDVHIPLKRGIFLQSGSKGKKWIPVTYEKLPDF 226
+G VEKV ED C +RV+I+++++ PL RG ++ K W+ YE+LP+F
Sbjct: 143 SIGLVEKVAASEDERGGENC-MRVRIRLEINRPLCRGRLVKFEEGIKGWVAFRYERLPNF 202
Query: 227 CYGCGCLGHTIKEC----ENLLGPNDGELRYGAWLREPIKVWSSDDSSIGRNFHGRGREE 286
CY CGCL H K+C + N E ++GAWL R
Sbjct: 203 CYWCGCLDHGEKDCDVGIQQRQTSNKQEYQFGAWL----------------------RAT 262
Query: 287 TETTTNKEHVAVEKNLP-----AARPDPPVTESKTLGKERVTVEYSKMELEPNLDNQSLS 346
++ +K V V N P + R DPP K + + TVE + + ++
Sbjct: 263 SDRAPHKTVVIVPGNQPKSRDKSCRQDPPC--RKDPPQHQPTVEAEDLTRNQRENGKTTD 322
Query: 347 GSKHKAEAELVQVETSKRRIV---IEEND--------------------------LNARS 406
++ E E+ ++E + + I +D LN +
Sbjct: 323 NTEEDPENEM-EIEQNPGFPIPDRIHNSDQPWRLTCFYGAPETHLREHSWNLLRTLNGQH 382
Query: 407 V----------EAANNSEKIGGIDRSESEMRKFRDTIDVCGLMDPGFCGPMFTW------ 466
E +SEK G ++SES+M++FR ID CG +D GF G FTW
Sbjct: 383 ALPWCCFGDFNEIVRSSEKSGRRNQSESQMQRFRAVIDECGFIDLGFRGLPFTWCNNRRG 442
Query: 467 -----------------------LTVHHLAKLASDHRPIIADWKEEPPDHGKHMIGRPK- 496
V H+ SDH+PI + + + RP+
Sbjct: 443 NATTWLRLDRFMATNEWVLRFSSAAVDHMECTTSDHKPICLNTQPV-------QVPRPRQ 502
BLAST of Lag0001193 vs. ExPASy TrEMBL
Match:
A0A2N9INH4 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54999 PE=4 SV=1)
HSP 1 Score: 139.0 bits (349), Expect = 5.3e-29
Identity = 112/415 (26.99%), Postives = 170/415 (40.96%), Query Frame = 0
Query: 119 DKAMLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSAEAIGNLLGKVEKVDIRE 178
DK +++FE ++ DD+ F +V+ W H LP + SA IG LGKVE+V ++
Sbjct: 95 DKFLVVFERLGEDINVDDLLFSHVTFWVQIHNLPVRRMTEESAAVIGKTLGKVERVADKD 154
Query: 179 DVDPTWGCSLRVKIQIDVHIPLKRGIFLQSGSKGKKWIPVTYEKLPDFCYGCGCLGHTIK 238
D C +RV++++DV IPL RG ++ K WI YE+LP+FCY CGCL H K
Sbjct: 155 DERGGENC-MRVQVRLDVTIPLCRGRMIKMEEGKKSWIAFRYERLPNFCYLCGCLDHAEK 214
Query: 239 ECENLLGP----NDGELRYGAWLREPIKVWSSDDSSIGRNFHGRGREETETTTNKEHVAV 298
+C++ L + +YGAW+R
Sbjct: 215 DCDDGLKKKNVVSSEGFQYGAWMR------------------------------------ 274
Query: 299 EKNLPAARPDPPVTESKTLGKERVTVEYSKMELEPNLD-NQSLSGSKHKAEAELVQVETS 358
A PP KT+ + ++S +L ++ + S H EL + + S
Sbjct: 275 -----AEMDRPP---RKTMIVSLMATQHSHGDLHASMGLLKHTSVRIHGTSFELSRSQFS 334
Query: 359 KRRIVIEENDLNARSVEAANNSEKIGGIDRSESEMRKFRDTIDVCGLMDPGFCGPMFTW- 418
D N E SE IG R++ +M+ FR+ ID C +D G+ G FTW
Sbjct: 335 LPWCC--TGDFN----EIVRCSESIGRRSRNDRQMQGFRNVIDDCEFLDLGYRGLPFTWC 394
Query: 419 ----------------------------LTVHHLAKLASDHRPIIADWKEEPPDHGKHMI 478
+ V+HL SDH+PI W P +
Sbjct: 395 NNRRGEATTWLRLDRFMTTNEWLMHFHSVVVYHLECTESDHKPI---WLTTAPMQSQRPK 452
Query: 479 GRPKRFEEVWTKYEECREIVEQVWKSGDRNGRGDLLEKTKMCLSRLGQ----WSR 496
+ RF+E+W C E + + W RG + + + + R G+ WSR
Sbjct: 455 PKLFRFKEMWRTEVGCEETITKAWVP---KVRGSPMVQVQDMIHRCGKDLTAWSR 452
BLAST of Lag0001193 vs. ExPASy TrEMBL
Match:
A0A2N9G8F2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23724 PE=4 SV=1)
HSP 1 Score: 134.4 bits (337), Expect = 1.3e-27
Identity = 127/547 (23.22%), Postives = 211/547 (38.57%), Query Frame = 0
Query: 70 FKLPNSEIDR-----SGQKLKNSILCKIHTKKKINPEMFSSKMPKIWNQEHTIVDKAMLL 129
F L + E D+ Q+ K ++ K T++ IN E ++ E DK ++
Sbjct: 11 FSLQDQEDDKFDLSSMTQQNKPTLAAKFFTRRTINVE------ARVLLGEPWSYDKYLIA 70
Query: 130 FEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSAEAIGNLLGKVEKVDIREDVDPTW 189
F+ G + +D++F+ V+ W H LP C +T AE +G +G V + +D D
Sbjct: 71 FQRVGDGEAVEDLQFKMVAFWVQIHNLPIMCMKKTVAEMLGKSIGAVIRTQ-DQDEDSGS 130
Query: 190 GCSLRVKIQIDVHIPLKRGIFLQSGSKGKKWIPVTYEKLPDFCYGCGCLGHTIKECENLL 249
G +RV++Q+D+ PL RG + + G W YE+LP+FCY CG H K+CE L
Sbjct: 131 GRWMRVRVQVDISKPLIRGRRIGLANGGDGWASFQYERLPNFCYWCGIPTHGEKDCEAWL 190
Query: 250 ----GPNDGELRYGAWLR-EPIKVWSSDDSSI-GRNFHGRGREETETTTNKEHVA----- 309
D E YG WLR P +V ++ GR+ + R ++T+ E
Sbjct: 191 NTPEAEKDKEPEYGLWLRASPERVLRRVQVTVEGRSRNTRTADKTKLNGPAEVFGPAGPI 250
Query: 310 ---VEKNLPAARPDPP---VTESKTLGKERVTV----EYSKMELEPNLDNQSLSGSKHKA 369
+ +L P P +T ++ + + V + ++ + + + D + ++ +A
Sbjct: 251 MPKTKASLSTKDPRSPLGNITNNRDVTSPKPNVGTWKKMARAKGQVSQDTRKFIVAEKRA 310
Query: 370 EAELVQVETSKRR-------------IVIEENDLNARSVEAANNSEKIGGI--------- 429
E++Q+E R + N ++A E + ++ G+
Sbjct: 311 CDEVMQIEEEDMRSLKTARGQFKNLPVCYSSNHIDAIINEGTEKAWRLTGVYGVPETHRR 370
Query: 430 -------------------------------------DRSESEMRKFRDTIDVCGLMDPG 489
R + +MR FR +D CGL+D
Sbjct: 371 EETWTLLRHLDNMIQLPWCCIGDFNEIVKLEEMKGRLARPDCQMRSFRSALDDCGLVDLR 430
Query: 490 FCGPMFTWLT-----------------------------VHHLAKLASDHRPIIADWKEE 502
+ G FTW V HL SDH+ + +
Sbjct: 431 YRGFPFTWCNNRDPPFTTWVRLDRAVANIDWLHQFPMARVEHLDVSKSDHKCLWLNCSPS 490
BLAST of Lag0001193 vs. ExPASy TrEMBL
Match:
A0A2N9IPY7 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53943 PE=4 SV=1)
HSP 1 Score: 126.7 bits (317), Expect = 2.7e-25
Identity = 124/516 (24.03%), Postives = 192/516 (37.21%), Query Frame = 0
Query: 119 DKAMLLFEEPKAGVSCDDMEFRYVSLWTHFHKLPYACFSRTSAEAIGNLLGKVEKVDIRE 178
DK++++F+ +D F +VS W H LP + +A IG +G+VEKV R+
Sbjct: 15 DKSLVVFQRLMEDGPINDTLFSHVSFWVQLHNLPIQHMTEEAAITIGKSIGEVEKVAARD 74
Query: 179 DVDPTWGCSLRVKIQIDVHIPLKRGIFLQSGSKGKKWIPVTYEKLPDFCYGCGCLGHTIK 238
D C +R+++++DV PL R ++ K+W+ YE+LP+FCY CG H K
Sbjct: 75 DERGGENC-IRIRVRMDVMRPLCRERMVKMEEGKKRWVAFRYERLPNFCYWCGLFDHGEK 134
Query: 239 ECENLLGPNDG----ELRYGAWLREPIKVWSSDDSSIGRNFHGRGRE------------E 298
+C+ L E ++GAWLR + + RGRE E
Sbjct: 135 DCDIGLRQRHADSVEEFQFGAWLRASSDRPPPKTAVMVSGILPRGREKPPNEPRRNPTPE 194
Query: 299 TETTTNKEH----------------VAVEKNLPAARPDPP--------------VTESKT 358
T H + VE+N PP + ++
Sbjct: 195 TSEPQASPHRHNQVPDSMQPDLETDMEVEQNPGITDCTPPRKSTMDLFNAQICEIDQAIN 254
Query: 359 LGKERVTVEYSKMELEPNLDNQSLSGSKHKAE----------------AELVQVE----- 418
E+VT+E L N +Q + + A+ A+LV+++
Sbjct: 255 YIPEKVTIEEQNPVLVHNFPSQLNAITTPCAQLMQPESTPRPPLVQELAQLVRLKDPSVL 314
Query: 419 ------TSKRRIVI-------------------EENDLNARSV----------------E 478
T + R+ + EN N E
Sbjct: 315 FLSETWTDEDRLEVLRSNPWRFICFYGAPETHLRENSWNLLRTLKNQHNLPWCCVGDFNE 374
Query: 479 AANNSEKIGGIDRSESEMRKFRDTIDVCGLMDPGFCGPMFTWLT---------------- 497
NSEK G ++SE +M+ F++ ID CG +D GF G FTW
Sbjct: 375 IIRNSEKSGRRNQSERQMQGFKNVIDECGFIDLGFRGFPFTWCNNKRGSATTWLRLDRFM 434
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
CAD6267426.1 | 1.3e-29 | 28.73 | unnamed protein product [Miscanthus lutarioriparius] | [more] |
PPE01936.1 | 1.7e-26 | 25.61 | hypothetical protein GOBAR_DD01012 [Gossypium barbadense] | [more] |
XP_022132681.1 | 9.5e-25 | 30.42 | uncharacterized protein LOC111005481 [Momordica charantia] | [more] |
XP_030924672.1 | 1.6e-24 | 24.91 | uncharacterized protein LOC115951647 [Quercus lobata] | [more] |
XP_030942000.1 | 2.1e-24 | 41.50 | uncharacterized protein At4g02000-like [Quercus lobata] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2N9E949 | 4.8e-30 | 27.59 | CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3389... | [more] |
A0A2N9FNT0 | 1.1e-29 | 25.27 | RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16695 ... | [more] |
A0A2N9INH4 | 5.3e-29 | 26.99 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A2N9G8F2 | 1.3e-27 | 23.22 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23724 PE=4 SV=1 | [more] |
A0A2N9IPY7 | 2.7e-25 | 24.03 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
Match Name | E-value | Identity | Description | |