Lag0000573 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0000573
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	basic leucine zipper 43
Location	chr4: 10317551 .. 10318024 (+)
RNA-Seq Expression	Lag0000573
Synteny	Lag0000573

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCCTGGTGAAATTGCAAGTCTCCATTATCTTCTTTCATCCAACCCATGTCTCTATTCTTCTCAATTGAACATGTCTCAGGACAACACAAACATGATGCAGCTTAATCAGTTGTGTAATCCATTATCAAAATTTCAAGATATGAATCCACCATCCTTGAGCAGTAACTCAACTTCTGATGAAGCAGAAGACCAACAACTGAGCCTCATCAATGAGAGGAAACAGAGGAGGATGATATCAAATCGAGAGTCTGCACGCCGATCGCGAATGCGCAAGCAAAAGCATTTGGATGAGCTGTGGTCTCAGGTCCTTTGGCTCCGGAATGAAAACCACCAGCTAATAGATAAGCTGAACCAAGTTTCTGAGTGTCATGATCGGGCTCTACAGGAGAATGCTCAGCTTAAGGAGGAAGCATCTGAGCTTCGTCAAATGCTCACCGACTTCCAACTTCATAATCCTTACCTACCTTGA

mRNA sequence

ATGCAGCCTGGTGAAATTGCAAGTCTCCATTATCTTCTTTCATCCAACCCATGTCTCTATTCTTCTCAATTGAACATGTCTCAGGACAACACAAACATGATGCAGCTTAATCAGTTGTGTAATCCATTATCAAAATTTCAAGATATGAATCCACCATCCTTGAGCAGTAACTCAACTTCTGATGAAGCAGAAGACCAACAACTGAGCCTCATCAATGAGAGGAAACAGAGGAGGATGATATCAAATCGAGAGTCTGCACGCCGATCGCGAATGCGCAAGCAAAAGCATTTGGATGAGCTGTGGTCTCAGGTCCTTTGGCTCCGGAATGAAAACCACCAGCTAATAGATAAGCTGAACCAAGTTTCTGAGTGTCATGATCGGGCTCTACAGGAGAATGCTCAGCTTAAGGAGGAAGCATCTGAGCTTCGTCAAATGCTCACCGACTTCCAACTTCATAATCCTTACCTACCTTGA

Coding sequence (CDS)

ATGCAGCCTGGTGAAATTGCAAGTCTCCATTATCTTCTTTCATCCAACCCATGTCTCTATTCTTCTCAATTGAACATGTCTCAGGACAACACAAACATGATGCAGCTTAATCAGTTGTGTAATCCATTATCAAAATTTCAAGATATGAATCCACCATCCTTGAGCAGTAACTCAACTTCTGATGAAGCAGAAGACCAACAACTGAGCCTCATCAATGAGAGGAAACAGAGGAGGATGATATCAAATCGAGAGTCTGCACGCCGATCGCGAATGCGCAAGCAAAAGCATTTGGATGAGCTGTGGTCTCAGGTCCTTTGGCTCCGGAATGAAAACCACCAGCTAATAGATAAGCTGAACCAAGTTTCTGAGTGTCATGATCGGGCTCTACAGGAGAATGCTCAGCTTAAGGAGGAAGCATCTGAGCTTCGTCAAATGCTCACCGACTTCCAACTTCATAATCCTTACCTACCTTGA

Protein sequence

MQPGEIASLHYLLSSNPCLYSSQLNMSQDNTNMMQLNQLCNPLSKFQDMNPPSLSSNSTSDEAEDQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLIDKLNQVSECHDRALQENAQLKEEASELRQMLTDFQLHNPYLP

Homology

[Close]

BLAST of Lag0000573 vs. NCBI nr
Match: XP_038905338.1 (basic leucine zipper 43-like [Benincasa hispida])

HSP 1 Score: 279.3 bits (713), Expect = 2.1e-71
Identity = 149/163 (91.41%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 1   MQPGEIASLHYLLSSNPCLYSSQLNMSQDNTNMMQLNQLCNPLSKF------QDMNPPSL 60
           MQPGEIASLHYLLSSNP L+SSQ NMS D+TNMMQLNQ  NPLSKF      QDMNPPSL
Sbjct: 1   MQPGEIASLHYLLSSNPSLHSSQFNMSHDSTNMMQLNQFSNPLSKFQYPSQVQDMNPPSL 60

Query: 61  SSNSTSDEAEDQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQL 120
           SSNSTSDEA+DQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQL
Sbjct: 61  SSNSTSDEADDQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQL 120

Query: 121 IDKLNQVSECHDRALQENAQLKEEASELRQMLTDFQLHNPYLP 158
           IDKLNQVSECHDRALQENAQLKEEASELRQMLTDFQLHNPYLP
Sbjct: 121 IDKLNQVSECHDRALQENAQLKEEASELRQMLTDFQLHNPYLP 163

[Close]

BLAST of Lag0000573 vs. NCBI nr
Match: XP_004137148.1 (basic leucine zipper 43 [Cucumis sativus])

HSP 1 Score: 275.4 bits (703), Expect = 3.0e-70
Identity = 147/161 (91.30%), Postives = 150/161 (93.17%), Query Frame = 0


Query: 1   MQPGEIASLHYLLSSNPCLYSSQLNMSQDNTNMMQLNQLCNPLSKF----QDMNPPSLSS 60
           MQPGEIASLHYLLSSNP LY+SQ  MS D+TNMM LNQ  NPLSKF    QDMNPPSLSS
Sbjct: 1   MQPGEIASLHYLLSSNPSLYTSQFIMSHDSTNMMHLNQFSNPLSKFKYPSQDMNPPSLSS 60

Query: 61  NSTSDEAEDQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLID 120
           NSTSDEAEDQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLID
Sbjct: 61  NSTSDEAEDQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLID 120

Query: 121 KLNQVSECHDRALQENAQLKEEASELRQMLTDFQLHNPYLP 158
           +LNQVSECHDRALQENAQLKEEASELRQMLTDFQLHNPYLP
Sbjct: 121 RLNQVSECHDRALQENAQLKEEASELRQMLTDFQLHNPYLP 161

[Close]

BLAST of Lag0000573 vs. NCBI nr
Match: XP_016901802.1 (PREDICTED: basic leucine zipper 43 [Cucumis melo] >TYJ99666.1 basic leucine zipper 43 [Cucumis melo var. makuwa])

HSP 1 Score: 263.5 bits (672), Expect = 1.2e-66
Identity = 145/164 (88.41%), Postives = 146/164 (89.02%), Query Frame = 0


Query: 1   MQPGEIASLHYLLSSNPCLYSSQLNMSQDNTNMMQLNQLCN-PLSKF------QDMNPPS 60
           MQPGEIASLHYLLSSNP LYSSQ  M  D+TN M  NQ  N P SKF      QDMNPPS
Sbjct: 1   MQPGEIASLHYLLSSNPSLYSSQFIMPHDSTNRMHSNQFSNPPSSKFQYPSQVQDMNPPS 60

Query: 61  LSSNSTSDEAEDQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQ 120
           LSSNSTSDEAEDQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQ
Sbjct: 61  LSSNSTSDEAEDQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQ 120

Query: 121 LIDKLNQVSECHDRALQENAQLKEEASELRQMLTDFQLHNPYLP 158
           LIDKLNQVSECHDRALQENAQLKEEASELRQMLTDFQLHNPYLP
Sbjct: 121 LIDKLNQVSECHDRALQENAQLKEEASELRQMLTDFQLHNPYLP 164

[Close]

BLAST of Lag0000573 vs. NCBI nr
Match: XP_022155056.1 (LOW QUALITY PROTEIN: basic leucine zipper 43-like [Momordica charantia])

HSP 1 Score: 261.2 bits (666), Expect = 5.9e-66
Identity = 141/161 (87.58%), Postives = 143/161 (88.82%), Query Frame = 0


Query: 1   MQPGEIASLHYLLSSNPCLYSSQLNMSQDNTNMMQLNQLCNPLSKF------QDMNPPSL 60
           MQP EI SLHYL SS P LYSSQ NMSQDNTNMM LNQ  NPLSKF      QDMN PS 
Sbjct: 1   MQPDEITSLHYLFSSTPSLYSSQFNMSQDNTNMMHLNQFSNPLSKFQYPSQVQDMNLPSF 60

Query: 61  SSNSTSDEAEDQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQL 120
           SSNSTSDEAEDQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQV+WLRNENHQL
Sbjct: 61  SSNSTSDEAEDQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVIWLRNENHQL 120

Query: 121 IDKLNQVSECHDRALQENAQLKEEASELRQMLTDFQLHNPY 156
           IDKLNQVSE HDRALQENAQLKEEASELRQM+TDFQLHNPY
Sbjct: 121 IDKLNQVSESHDRALQENAQLKEEASELRQMITDFQLHNPY 161

[Close]

BLAST of Lag0000573 vs. NCBI nr
Match: XP_022955729.1 (basic leucine zipper 43-like [Cucurbita moschata] >KAG7018187.1 Basic leucine zipper 43, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 258.8 bits (660), Expect = 2.9e-65
Identity = 141/163 (86.50%), Postives = 144/163 (88.34%), Query Frame = 0


Query: 1   MQPGEIASLHYLLSSNPCLYSSQLNMSQDNTNMMQLNQLCNPLSKF------QDMNPPSL 60
           MQPGEI SLHYLLSS P L+SSQ NMSQD TN + LNQ  NP +KF      QDMNPP L
Sbjct: 1   MQPGEIESLHYLLSSAPSLHSSQFNMSQDRTNRVHLNQFSNPYTKFQYPYQVQDMNPPPL 60

Query: 61  SSNSTSDEAEDQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQL 120
           SSNSTSDEAEDQQLSLINERKQRRMISNRESARRSRMRKQKHLDEL SQVLWLRNENHQL
Sbjct: 61  SSNSTSDEAEDQQLSLINERKQRRMISNRESARRSRMRKQKHLDELCSQVLWLRNENHQL 120

Query: 121 IDKLNQVSECHDRALQENAQLKEEASELRQMLTDFQLHNPYLP 158
           IDKLNQVSECHDRALQENAQLKEEASELRQML DFQLHNPYLP
Sbjct: 121 IDKLNQVSECHDRALQENAQLKEEASELRQMLRDFQLHNPYLP 163

[Close]

BLAST of Lag0000573 vs. ExPASy Swiss-Prot
Match: Q9FMC2 (Basic leucine zipper 43 OS=Arabidopsis thaliana OX=3702 GN=BZIP43 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.6e-29
Identity = 66/99 (66.67%), Postives = 83/99 (83.84%), Query Frame = 0


Query: 55  SSNSTSDEAEDQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQL 114
           S+NSTSDEAE+    +INERKQ+R ISNRESARRSRMRKQ+ +DELWSQV+WLR+ENHQL
Sbjct: 53  SNNSTSDEAEENHKEIINERKQKRKISNRESARRSRMRKQRQVDELWSQVMWLRDENHQL 112

Query: 115 IDKLNQVSECHDRALQENAQLKEEASELRQMLTDFQLHN 154
           + KLN V E  ++ ++EN QLKEE +EL+QM++D QL N
Sbjct: 113 LRKLNCVLESQEKVIEENVQLKEETTELKQMISDMQLQN 151

[Close]

BLAST of Lag0000573 vs. ExPASy Swiss-Prot
Match: Q9CA46 (Basic leucine zipper 8 OS=Arabidopsis thaliana OX=3702 GN=BZIP8 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.9e-17
Identity = 58/134 (43.28%), Postives = 86/134 (64.18%), Query Frame = 0


Query: 22  SQLNMSQDNTNMMQLNQLCNPLSKFQDMNPPS---LSSNSTSDEAEDQQLSLINERKQRR 81
           S  N+   N N   L Q+      F D  P S    +S+ +S  AED      NERK+RR
Sbjct: 4   SVYNLPSQNPNPQSLFQI------FVDRVPLSNLPATSDDSSRTAED------NERKRRR 63

Query: 82  MISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLIDKLNQVSECHDRALQENAQLKEE 141
            +SNRESARRSRMRKQ+H++ELWS ++ L N+N  L+D+L+Q  EC+++ ++EN +L+EE
Sbjct: 64  KVSNRESARRSRMRKQRHMEELWSMLVQLINKNKSLVDELSQARECYEKVIEENMKLREE 123

Query: 142 ASELRQMLTDFQLH 153
            S+ R+M+ +  L+
Sbjct: 124 NSKSRKMIGEIGLN 125

[Close]

BLAST of Lag0000573 vs. ExPASy Swiss-Prot
Match: Q9SI15 (bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.3e-10
Identity = 39/94 (41.49%), Postives = 60/94 (63.83%), Query Frame = 0


Query: 53  SLSSNSTSDEAEDQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENH 112
           S SS+   +      +  ++ERK++RM+SNRESARRSRMRKQKH+D+L +Q+  L N+N 
Sbjct: 10  SSSSSDGGNNNPSDSVVTVDERKRKRMLSNRESARRSRMRKQKHVDDLTAQINQLSNDNR 69

Query: 113 QLIDKLNQVSECHDRALQENAQLKEEASELRQML 147
           Q+++ L   S+ + +   EN+ L  +  EL   L
Sbjct: 70  QILNSLTVTSQLYMKIQAENSVLTAQMEELSTRL 103

[Close]

BLAST of Lag0000573 vs. ExPASy Swiss-Prot
Match: C0Z2L5 (bZIP transcription factor 44 OS=Arabidopsis thaliana OX=3702 GN=BZIP44 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.9e-09
Identity = 40/89 (44.94%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 58  STSDEAEDQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLIDK 117
           ++  E++ +Q  LI+ERK++R  SNRESARRSRMRKQKHLD+L +QV  LR EN Q++  
Sbjct: 25  NSGSESDLRQRDLIDERKRKRKQSNRESARRSRMRKQKHLDDLTAQVTHLRKENAQIVAG 84

Query: 118 LNQVSECHDRALQENAQLKEEASELRQML 147
           +   ++ +     EN  L+ +  EL   L
Sbjct: 85  IAVTTQHYVTIEAENDILRAQVLELNHRL 113

[Close]

BLAST of Lag0000573 vs. ExPASy Swiss-Prot
Match: Q9LZP8 (bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 2.6e-08
Identity = 36/89 (40.45%), Postives = 61/89 (68.54%), Query Frame = 0


Query: 58  STSDEAEDQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLIDK 117
           S   + + +  ++ +ERK++RMISNRESARRSRMRKQK L +L ++V  L+N+N ++ ++
Sbjct: 9   SPESDNDPRYATVTDERKRKRMISNRESARRSRMRKQKQLGDLINEVTLLKNDNAKITEQ 68

Query: 118 LNQVSECHDRALQENAQLKEEASELRQML 147
           +++ S+ +     +N  L+ +ASEL   L
Sbjct: 69  VDEASKKYIEMESKNNVLRAQASELTDRL 97

The following BLAST results are available for this feature:

BLAST of Lag0000573 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905338.1	2.1e-71	91.41	basic leucine zipper 43-like [Benincasa hispida]	[more]
XP_004137148.1	3.0e-70	91.30	basic leucine zipper 43 [Cucumis sativus]	[more]
XP_016901802.1	1.2e-66	88.41	PREDICTED: basic leucine zipper 43 [Cucumis melo] >TYJ99666.1 basic leucine zipp...	[more]
XP_022155056.1	5.9e-66	87.58	LOW QUALITY PROTEIN: basic leucine zipper 43-like [Momordica charantia]	[more]
XP_022955729.1	2.9e-65	86.50	basic leucine zipper 43-like [Cucurbita moschata] >KAG7018187.1 Basic leucine zi...	[more]

BLAST of Lag0000573 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMC2	4.6e-29	66.67	Basic leucine zipper 43 OS=Arabidopsis thaliana OX=3702 GN=BZIP43 PE=1 SV=1	[more]
Q9CA46	6.9e-17	43.28	Basic leucine zipper 8 OS=Arabidopsis thaliana OX=3702 GN=BZIP8 PE=1 SV=1	[more]
Q9SI15	6.3e-10	41.49	bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1	[more]
C0Z2L5	6.9e-09	44.94	bZIP transcription factor 44 OS=Arabidopsis thaliana OX=3702 GN=BZIP44 PE=1 SV=1	[more]
Q9LZP8	2.6e-08	40.45	bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 118..152
None	No IPR available	GENE3D	1.20.5.170		coord: 72..129 e-value: 5.6E-16 score: 60.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..66
None	No IPR available	PANTHER	PTHR46324:SF26	BZIP PROTEIN (ATBZIP48)	coord: 1..155
None	No IPR available	CDD	cd14702	bZIP_plant_GBF1	coord: 75..126 e-value: 2.17127E-18 score: 71.7961
None	No IPR available	SUPERFAMILY	57959	Leucine zipper domain	coord: 74..123
IPR004827	Basic-leucine zipper domain	SMART	SM00338	brlzneu	coord: 70..134 e-value: 7.8E-14 score: 62.0
IPR004827	Basic-leucine zipper domain	PFAM	PF00170	bZIP_1	coord: 74..123 e-value: 2.5E-13 score: 49.9
IPR004827	Basic-leucine zipper domain	PROSITE	PS00036	BZIP_BASIC	coord: 77..92
IPR004827	Basic-leucine zipper domain	PROSITE	PS50217	BZIP	coord: 72..123 score: 10.461295
IPR044521	Basic leucine zipper 8/43	PANTHER	PTHR46324	BASIC LEUCINE ZIPPER 43-RELATED	coord: 1..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0000573.1	Lag0000573.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity