Lag0000533 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0000533
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	PMD domain-containing protein
Location	chr4: 9559706 .. 9563039 (-)
RNA-Seq Expression	Lag0000533
Synteny	Lag0000533

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAAGAAGTTGGGCAGGTTGTTGTTCGGGTTGCAGACGAAAAGAGAGATTGTGAGGGCGTGCGACAAGAGAGAGACGTCGGCGTTACTTGCGTCGTGCAGCGACAATCGAAGCGGCGCGAGTGACAACCCGGGCGGCACGGCGGTGCAAGTGTCAGTCCTGCAAGATGAGGGAGACGAGCGAGAGAGAAAAATAGAGGGATAGAGAGAGACTGCGAGGATGAGAGAGAAAGTGTGAAAATGAGAGCTTGGGGAAGAAGAAGCATTTTTCAAAGTTTCTTTTTTTTTTTTTTTCCAATTTTTTTTAAACTCTTTTATCTTATTTAGAGAGAAACATGAACCCTTTTTTTTAAAAAAAAAAATTCTTTTCTAACTTGCTTTTGTTTTTTTTTTTTTTTTTTTTTTTAAATTTCCATTTTTTTTTAAAGTGGTAAACGTTTACTTTTTCTTTTTTCAGTTTTCTTTATATATTTTTCTTAAACTTTCTGATTTTCTTCTTGCTTAACTTTTTTTTATTTTAATTAATTGATTTTTTTTAGTGAAATTGTGTGTACCAACCCTTTTTCTTATTATTATTTTTTATATCTTCGGTTCTTTTCTCTGCGACCCTGTTTTTTTAAAAAAAAAAAATTCAACACACATTTCTCTCCACTTTTTTTTTTATTATTATTATTTTAACTTAATGATCCTTTTTGTTTTGCTAAATACTCTTTTCTTTTCTTTTTTAATTTCAGGGAATAATTGTATTCATTCGTTCTTATTGCACAATCAACACTCGCTTGCTACCTAGAAGGTGAATACATTTTTTTTCATTATGCATTTATTATTAGTTATTTCCCAATATGACAAGTTTATCAACCCCTGGTTCAGGCGGAATTCAGGATGATCTCTTGCCCTTCACTTCTTGCCTCAAGTAGTGATCAACCCCTGATTTAGGTGGAATTCAAGCTGATCACTTGCCCTTTTCATCATGCCTCAGGCAGCGATCAACCCCTGATTCAGGCAGAATTCAGGCCCTTTTCATCTTGCCTCAGGCAGCGATCAACCCCTGATTCAGGCAGAATTCAGGCCCTTTTCATCTTGCCTCAGGCAGCGATCAACCCCTGATTCAAGTAGAATTCAGGATGATCTCTCGCCCTTTCCATCTTGCTTCGAAAGTGATCACCCCTGATTCCGACAAAATTCAGACCGATCACTTTATATTCTGTGATTTAATAAGATCATCATCATTGCTTTGACCAATGTTATATCTTTTCTTTTAACCTTCTCTTTTCTTATTTGTAGGAACATGGTGCATTTCACAGAGCTTTCAGATAACGGGAAGAAAAGTTTGGTTTTTCTACTTGACAAAGATCAACCTATCAAAAGTGGGATCATTCTTCCAATAGAGACTTCCATTGAATAGTCAAACCTTGAATTAGACAAATCTCATTTTCTTTCGGAATGGTCTGTAGAAAGGACTCAAGGCCAAAATTCTTCCATTAAGGTTTGGATTCTACGATCTTCTTTACACGAAAAGAAGTCAAATGTCAATCCAGAACTGACGTTGGGGCGTCGCATCATTGAAAATCAGGTTCGTTGGGGGCCCTTGCTGAAATTCAACGGAGAATTTACTCACATTGCTTGTTATTGGGAGTGGCTGGAATTTGTCATTTGCTCGGAACAAGAAACTGCTACGAGGCTCTGGTTTATATGCGGTTGTGATAGCTTCTTTATACTCCTATGATCACAACAATGACATAGTTCGGGCCTTTTGCGAAGCCTAGTTTCCTTCAACCAACACCTTCCACACTTCATCTGGGGAAATATCCCTTTCTTTGTGGGACTTGTGGAAACTTGGAGGTCTTCCCATCAAAGGGAGATTTTACGATGAAACTATTCCTTGTTGTGAGGAATTGTTGAGATCATGCAACGAAGACGACCATCTACCCAAGAGTTGTGGATATATTTTTGATGCATATCATCGTATTGCATCCCAGCAACTGGAGAGACAACAAATCTCTACTCACCTGTGGATTTCCTTTTGGTTTAAAGGTGATTCGAAATACGCCAAGCCTCCTTCTCGTAGGCCAAAGAAATCTTCTCGCCCTCTCTCAACTCATAATCCACAGGTCTATCACCCAGGCATGCGACTGGTCTGACGAAGAACAAGAGTTGTTTCAAGATCTTGGTGTAGAAGAAGGATGGAAAGAGCGAACGTATCTGACCGCCTTTCTTTCCTGTTGGTTGTGTGTTTTTGTGTTTCCCTATAAGAACGTGAATTTTCTTCCCCCTAGTGTATTTAAAGTTGTGAGCATAATGGCCGAAGGTGCTATTTTTAGTCTTGTAGTCCCGATTTTATCCAACATTTATCACGAACTCGGCCAAATTTTCAATACGCCACATTCAACTAGACGTTCTGATATTTGTTTTCCCATTGATTATGTTTACGGCTAGCTAGCACATCATTTTAAACTGCATACGCTAGTAAGGGGTCCCCTGATGGTTTACTATTCTGGTGAAGGTGGTGCAAAATACTTCAACAGTCTTGAAGCTCGCAAGCTAATTCATCAAGGCACCTCTATAATGTGGCATGCTAGTCTTTCCTCCAAGAATGATAAAGTCGAAATATTGGAAGACGTTAAGGGTTTATCATTTTCCTCTACTTCATTATTTATAAGCCTTCGATCTTGCTATTTGTGTTCTTGCCATGGAAACTTCATGACTATAGAAGCTTACAGACCTTGTCGATTTAGCCGTCAATTTGGCTTTCATCAGGATGTACCAAATGAATTACATAATGATCCTCCCCCGGTTAGCCATCAGAATGTTTTTCATTCTTGGAGAATTTGTACTGCAACTTTGACTATGTCGAAGGTATACCTCCCAACGCGCCTACTAGATCCTCGTGATCAAACCACTCGATCTTATGATAAGTGGTGGTCACAAAAACATGGACGCTATTTGGAAGAAGGCATACAACTTTTAGTGAATAGTTTTACTATTCCTTCAACTAAGTCCAAACCTCATAAAGATCTGGATACCAAAAAAGCTGGTAAGAGGGTGATTGAGGCGTCAACTCGTTCGATGAACAACATTCGCGATGAAGAAGAAAGTCATAGTAGCAATGACGATCGTCATTGTAAAAGACCAAAAAAGGTAAAGAAATCATCCAATGATCAATCTTCAGTTGGCAACTTATATTTTTTTTAAAACGCATGCTGCAGTTTCATTTACTTACTCTTGTATTCCTTCTTACTTTGCAGGTACCTTTGGAGGATCAATCATTAACAAGTCCCAACGCTTTTGCTTCTACCTCGAAGAATATTGGCTCCGTGTCAAAAAGCAAATAG

mRNA sequence

ATGAGAAAGAAGTTGGGCAGGTTGTTGTTCGGGTTGCAGACGAAAAGAGAGATTGTGAGGGCGTGCGACAAGAGAGAGACGTCGGCGTTACTTGCGTCGTGCAGCGACAATCGAAGCGGCGCGAGTGACAACCCGGGCGGCACGGCGGTGCAAGTGAACATGGTGCATTTCACAGAGCTTTCAGATAACGGGAAGAAAAGTTTGGTTTTTCTACTTGACAAAGATCAACCTATCAAAAAAAGGACTCAAGGCCAAAATTCTTCCATTAAGGTTTGGATTCTACGATCTTCTTTACACGAAAAGAAGTCAAATGTCAATCCAGAACTGACGTTGGGGCGTCGCATCATTGAAAATCAGTTTCCTTCAACCAACACCTTCCACACTTCATCTGGGGAAATATCCCTTTCTTTGTGGGACTTGTGGAAACTTGGAGGTCTTCCCATCAAAGGGAGATTTTACGATGAAACTATTCCTTGTTGTGAGGAATTGTTGAGATCATGCAACGAAGACGACCATCTACCCAAGAGTTGTGGATATATTTTTGATGCATATCATCGTATTGCATCCCAGCAACTGGAGAGACAACAAATCTCTACTCACCTGTGGATTTCCTTTTGGTTTAAAGGTGATTCGAAATACGCCAAGCCTCCTTCTCGTAGGCCAAAGAAATCTTCTCGCCCTCTCTCAACTCATAATCCACAGCTAGCACATCATTTTAAACTGCATACGCTAGTAAGGGGTCCCCTGATGGTTTACTATTCTGGTGAAGGTGGTGCAAAATACTTCAACAGTCTTGAAGCTCGCAAGCTAATTCATCAAGGCACCTCTATAATGTGGCATGCTAGTCTTTCCTCCAAGAATGATAAAGTCGAAATATTGGAAGACGTTAAGGGTTTATCATTTTCCTCTACTTCATTATTTATAAGCCTTCGATCTTGCTATTTGTGTTCTTGCCATGGAAACTTCATGACTATAGAAGCTTACAGACCTTGTCGATTTAGCCGTCAATTTGGCTTTCATCAGGATGTACCAAATGAATTACATAATGATCCTCCCCCGGTTAGCCATCAGAATGTTTTTCATTCTTGGAGAATTTGTACTGCAACTTTGACTATGTCGAAGGTATACCTCCCAACGCGCCTACTAGATCCTCGTGATCAAACCACTCGATCTTATGATAAGTGGTGGTCACAAAAACATGGACGCTATTTGGAAGAAGGCATACAACTTTTAGTGAATAGTTTTACTATTCCTTCAACTAAGTCCAAACCTCATAAAGATCTGGATACCAAAAAAGCTGGTAAGAGGGTGATTGAGGCGTCAACTCGTTCGATGAACAACATTCGCGATGAAGAAGAAAGTCATAGTAGCAATGACGATCGTCATTGTAAAAGACCAAAAAAGGTACCTTTGGAGGATCAATCATTAACAAGTCCCAACGCTTTTGCTTCTACCTCGAAGAATATTGGCTCCGTGTCAAAAAGCAAATAG

Coding sequence (CDS)

ATGAGAAAGAAGTTGGGCAGGTTGTTGTTCGGGTTGCAGACGAAAAGAGAGATTGTGAGGGCGTGCGACAAGAGAGAGACGTCGGCGTTACTTGCGTCGTGCAGCGACAATCGAAGCGGCGCGAGTGACAACCCGGGCGGCACGGCGGTGCAAGTGAACATGGTGCATTTCACAGAGCTTTCAGATAACGGGAAGAAAAGTTTGGTTTTTCTACTTGACAAAGATCAACCTATCAAAAAAAGGACTCAAGGCCAAAATTCTTCCATTAAGGTTTGGATTCTACGATCTTCTTTACACGAAAAGAAGTCAAATGTCAATCCAGAACTGACGTTGGGGCGTCGCATCATTGAAAATCAGTTTCCTTCAACCAACACCTTCCACACTTCATCTGGGGAAATATCCCTTTCTTTGTGGGACTTGTGGAAACTTGGAGGTCTTCCCATCAAAGGGAGATTTTACGATGAAACTATTCCTTGTTGTGAGGAATTGTTGAGATCATGCAACGAAGACGACCATCTACCCAAGAGTTGTGGATATATTTTTGATGCATATCATCGTATTGCATCCCAGCAACTGGAGAGACAACAAATCTCTACTCACCTGTGGATTTCCTTTTGGTTTAAAGGTGATTCGAAATACGCCAAGCCTCCTTCTCGTAGGCCAAAGAAATCTTCTCGCCCTCTCTCAACTCATAATCCACAGCTAGCACATCATTTTAAACTGCATACGCTAGTAAGGGGTCCCCTGATGGTTTACTATTCTGGTGAAGGTGGTGCAAAATACTTCAACAGTCTTGAAGCTCGCAAGCTAATTCATCAAGGCACCTCTATAATGTGGCATGCTAGTCTTTCCTCCAAGAATGATAAAGTCGAAATATTGGAAGACGTTAAGGGTTTATCATTTTCCTCTACTTCATTATTTATAAGCCTTCGATCTTGCTATTTGTGTTCTTGCCATGGAAACTTCATGACTATAGAAGCTTACAGACCTTGTCGATTTAGCCGTCAATTTGGCTTTCATCAGGATGTACCAAATGAATTACATAATGATCCTCCCCCGGTTAGCCATCAGAATGTTTTTCATTCTTGGAGAATTTGTACTGCAACTTTGACTATGTCGAAGGTATACCTCCCAACGCGCCTACTAGATCCTCGTGATCAAACCACTCGATCTTATGATAAGTGGTGGTCACAAAAACATGGACGCTATTTGGAAGAAGGCATACAACTTTTAGTGAATAGTTTTACTATTCCTTCAACTAAGTCCAAACCTCATAAAGATCTGGATACCAAAAAAGCTGGTAAGAGGGTGATTGAGGCGTCAACTCGTTCGATGAACAACATTCGCGATGAAGAAGAAAGTCATAGTAGCAATGACGATCGTCATTGTAAAAGACCAAAAAAGGTACCTTTGGAGGATCAATCATTAACAAGTCCCAACGCTTTTGCTTCTACCTCGAAGAATATTGGCTCCGTGTCAAAAAGCAAATAG

Protein sequence

MRKKLGRLLFGLQTKREIVRACDKRETSALLASCSDNRSGASDNPGGTAVQVNMVHFTELSDNGKKSLVFLLDKDQPIKKRTQGQNSSIKVWILRSSLHEKKSNVNPELTLGRRIIENQFPSTNTFHTSSGEISLSLWDLWKLGGLPIKGRFYDETIPCCEELLRSCNEDDHLPKSCGYIFDAYHRIASQQLERQQISTHLWISFWFKGDSKYAKPPSRRPKKSSRPLSTHNPQLAHHFKLHTLVRGPLMVYYSGEGGAKYFNSLEARKLIHQGTSIMWHASLSSKNDKVEILEDVKGLSFSSTSLFISLRSCYLCSCHGNFMTIEAYRPCRFSRQFGFHQDVPNELHNDPPPVSHQNVFHSWRICTATLTMSKVYLPTRLLDPRDQTTRSYDKWWSQKHGRYLEEGIQLLVNSFTIPSTKSKPHKDLDTKKAGKRVIEASTRSMNNIRDEEESHSSNDDRHCKRPKKVPLEDQSLTSPNAFASTSKNIGSVSKSK

Homology

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BLAST of Lag0000533 vs. NCBI nr
Match: XP_031745312.1 (uncharacterized protein LOC116405439 [Cucumis sativus])

HSP 1 Score: 307.4 bits (786), Expect = 2.3e-79
Identity = 220/672 (32.74%), Postives = 287/672 (42.71%), Query Frame = 0


Query: 54  MVHFTELSDNGKKSLVFLLDKDQPI---------------------------------KK 113
           MVHFTE SD+ K+ L+ L D DQ +                                 K+
Sbjct: 1   MVHFTEYSDSTKRCLIILKDVDQSLEEGIILPVREGTYENIMDSQIPEDNFIFLPKWSKE 60

Query: 114 RTQGQNSSIKVWILRSSLHEKKSNVNPELTLGRRII------------------------ 173
           R    NSS+K W L SS+H K  N +PE TLGRRII                        
Sbjct: 61  RFVNPNSSLKSWFLESSIHNKPPNEDPESTLGRRIINDPKIRWGNVLKVHGEFYYLPHYW 120

Query: 174 -----------------------------------------ENQFPSTNTFHTSSGEISL 233
                                                    E   PSTNT HTS+GE+S+
Sbjct: 121 EWLELVVARNTAVLKRASLFNAVMASLYTYDRNSDIDRAFCEAWCPSTNTLHTSAGEMSI 180

Query: 234 SLWDLWKLGGLPIKGRFYDETIPCCEELLRSCNEDDHLPKSCGYIFDAYHRIASQQLERQ 293
           SLWDLW LGGL IKGRFY+E+IPC ++L+ S    D  P+SC ++F AY+RI SQ+++  
Sbjct: 181 SLWDLWILGGLSIKGRFYEESIPCHQDLIGS---PDVCPRSCEHLFAAYYRIVSQRMDHS 240

Query: 294 QISTHLWISFWF-KGDSKYAKPPSRRPKKSSRPLSTHNPQ-------------------- 353
           QI+   WISFW  + + KY+KPP R+PKK+SRP STHNP                     
Sbjct: 241 QITVSEWISFWVTRSEVKYSKPPPRKPKKTSRPRSTHNPDGIPIRRPDWSKAELKVFLDL 300

Query: 354 -------------------------------------------------------LAH-- 413
                                                                  LA+  
Sbjct: 301 SVTDDHRDKTYLAAFLSCWLCVFVFPDKQLSLRPEVFKVASLMAEGYTFSLAVPVLANIY 360

Query: 414 -----------------------------------HFKLHTLVRGPLMVYYSGEGGAKYF 469
                                              H+K    +RGP MV +SGEGGAKY+
Sbjct: 361 SGLRQVHDSTSSLGYSNACFPLHYVHGWLALYFNTHYKAPRSLRGPRMVEFSGEGGAKYY 420

[Close]

BLAST of Lag0000533 vs. NCBI nr
Match: KAA0047478.1 (hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 280.4 bits (716), Expect = 3.0e-71
Identity = 195/607 (32.13%), Postives = 267/607 (43.99%), Query Frame = 0


Query: 54  MVHFTELSDNGKKSLVFLLDKDQP--------IKKRTQG---------QNSSI------- 113
           MV+FTE   +G + LV L D++QP        ++K   G          N+S+       
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 114 -------KVWILRSSLHEKKSNVNPELTLGRRIIENQ----------------------- 173
                    W+L+SS+H +  N    LTLG+R+IE Q                       
Sbjct: 61  VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWL 120

Query: 174 -----------------------------------------FPSTNTFHTSSGEISLSLW 233
                                                     PSTNT HT +GE+S+SLW
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180

Query: 234 DLWKLGGLPIKGRFYDETIPCCEELLRSCNEDDH-LPKSCGYIFDAYHRI-ASQQLER-- 293
           DLW  GGLPIKG FY+E IP  +EL  +  +    LP +C Y+F AY+ I  +Q+ +R  
Sbjct: 181 DLWSFGGLPIKGDFYEERIPSFKELTSTSQDKTKCLPTTCQYLFQAYYSIVCTQRNDRST 240

Query: 294 -----QQISTHLWISFWFKGDSKYAKPPSRRPKKSSRPLSTHNPQ--------------- 353
                 Q++   WISFW+ G   Y KP +R+ KK+SR  ST NP                
Sbjct: 241 SSKNDSQVTIGSWISFWYLGSKSYDKPTTRKQKKASRSKSTQNPDGSKIQAREWSSRESM 300

Query: 354 ------------------------------------------------------------ 413
                                                                       
Sbjct: 301 LFAELGIRDDLKDETVANLMAAGTIYSLAVPVLANIYHGLGLITKASNPIGRMDFHFPMH 360

Query: 414 -----LAHHFKLH----TLVRGPLMVYYSGEGGAKYFNSLEARKLIHQGTSIMWHASLSS 469
                LAH+F  H    T VRGP M  +S EGG+ YF   EAR+LIH G  I WHASL +
Sbjct: 361 YVHGWLAHYFGTHYPLPTEVRGPKMTNFSDEGGSIYFGEYEARELIHNGARIQWHASLQN 420

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BLAST of Lag0000533 vs. NCBI nr
Match: KAA0053466.1 (hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 272.7 bits (696), Expect = 6.2e-69
Identity = 188/603 (31.18%), Postives = 262/603 (43.45%), Query Frame = 0


Query: 52  VNMVHFTELSDNGKKSLVFLLDKDQP--------IKKRTQG---------QNSSI----- 111
           + MV+FTE   +G + LV   D++QP        ++K   G          N+S+     
Sbjct: 37  LTMVYFTERFLSGVRHLVIFSDRNQPREDGLSLIVEKSWAGAFADHWPRLDNNSVLPRLS 96

Query: 112 ---------KVWILRSSLHEKKSNVNPELTLGRRIIENQ--------------------- 171
                      W+L+SS+H +  N    LTLG+ +IE Q                     
Sbjct: 97  MEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQHLIEGQTRWGTVTKVPGEFCFTDYYWE 156

Query: 172 -----------FPSTNTFHTSSGEISLSLWDLWKLGGLPIKGRFYDETIPCCEELLRSCN 231
                       PSTNT HT +GE+S+SLWDLW   GLPIKG FY+E IP  +EL  +  
Sbjct: 157 CDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWSFRGLPIKGDFYEERIPSFKELTSTSR 216

Query: 232 EDDH-LPKSCGYIFDAYHRI-ASQQLER-------QQISTHLWISFWFKGDSKYAKPPSR 291
           +    LP +C Y F AY+ I  +Q+ +R        Q++   WISFW+ G   Y KP +R
Sbjct: 217 DKTKCLPMTCQYHFQAYYSIVCTQRNDRSASSKNDSQVTIGSWISFWYLGSKSYDKPTTR 276

Query: 292 RPKKSSRPLSTHNPQ--------------------------------------------- 351
           + KK+SR  ST NP                                              
Sbjct: 277 KQKKASRSKSTQNPDGSKIQAREWSSRESMLFAELGIRDDLKDETYLAAFLSCWLCLFVF 336

Query: 352 ------------------------------------------------------------ 411
                                                                       
Sbjct: 337 PQKGSFLRLGVFRVASLMAAGTIYSLAVPVLANIYHGLGLITKASNPIGRMDFHFPMHYV 396

Query: 412 ---LAHHFKLH----TLVRGPLMVYYSGEGGAKYFNSLEARKLIHQGTSIMWHASLSSKN 469
              LAH+F  H      VRGP M  +SGEGG+ YF   EAR+LIH G  I WHA+L ++N
Sbjct: 397 HGWLAHYFGTHYPLPREVRGPKMTNFSGEGGSIYFGEYEARELIHNGVRIQWHANLHNRN 456

[Close]

BLAST of Lag0000533 vs. NCBI nr
Match: KAA0025356.1 (hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 269.6 bits (688), Expect = 5.3e-68
Identity = 192/607 (31.63%), Postives = 263/607 (43.33%), Query Frame = 0


Query: 54  MVHFTELSDNGKKSLVFLLDKDQP--------IKKRTQG---------QNSSI------- 113
           MV+FTE   +G + LV L D++QP        ++K   G          N+SI       
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLNNNSILPRLFME 60

Query: 114 -------KVWILRSSLHEKKSNVNPELTLGRRII-------------------------- 173
                    WIL+SS+H +  N    LTLG+R+I                          
Sbjct: 61  IPLSEGKSAWILQSSIHNEAHNSGRALTLGQRLIEVGRNTRLLYSTRLYGIVTASLYTYD 120

Query: 174 ----------ENQFPSTNTFHTSSGEISLSLWDLWKLGGLPIKGRFYDETIPCCEELLRS 233
                     E   PSTNT HT +GE+S+SLWDLW  GGLPIKG FY+E IP  +EL  +
Sbjct: 121 RNSDVVRAFCEAWCPSTNTLHTMTGELSISLWDLWSFGGLPIKGDFYEERIPSFKELTST 180

Query: 234 CNEDDH-LPKSCGYIFDAYHRI-ASQQLER-------QQISTHLWISFWFKGDSKYAKPP 293
             +    LP +C Y+F AY+ I  +Q+ +R        Q++   WISFW+ G   Y KP 
Sbjct: 181 SRDKTKCLPTTCQYLFQAYYSIVCTQRNDRSASSKNDSQVTIGSWISFWYLGSRSYDKPT 240

Query: 294 SRRPKKSSRPLSTHNPQ------------------------------------------- 353
           +R+ KK+S   ST NP                                            
Sbjct: 241 TRKQKKASHSKSTQNPDGSKIQAHEWSSRESMLFAELGIKDDLKDETYLAAFLSCWLCLF 300

Query: 354 ------------------------------------------------------------ 413
                                                                       
Sbjct: 301 IFPQKGSFLRPGVFRAASLMAACTIYSLAVPVLANIYHGLGLITKASNPIGRMDFHFPMH 360

Query: 414 -----LAHHFKLH----TLVRGPLMVYYSGEGGAKYFNSLEARKLIHQGTSIMWHASLSS 469
                LAH+F  H    T VRGP M  +SGEGG+ YF   EAR+LIH G  I WHA+L +
Sbjct: 361 YVHGWLAHYFGTHYPLPTEVRGPKMTNFSGEGGSIYFGEYEARELIHNGARIQWHANLQN 420

[Close]

BLAST of Lag0000533 vs. NCBI nr
Match: KAA0050516.1 (hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa])

HSP 1 Score: 248.8 bits (634), Expect = 9.6e-62
Identity = 188/635 (29.61%), Postives = 261/635 (41.10%), Query Frame = 0


Query: 54  MVHFTELSDNGKKSLVFLLDKDQP--------IKKRTQG---------QNSSI------- 113
           MV+FTE   +G + LV L D++QP        ++K   G          N+S+       
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIMEKPWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 114 -------KVWILRSSLHEKKSNVNPELTLGRRIIENQ----------------------- 173
                    WIL+SS+H +  N    LTLG+R+IE Q                       
Sbjct: 61  IPLSEGKSAWILQSSIHNEAPNSGRALTLGQRLIEGQTRWGTMTKVPGEFCFTDCYWEWL 120

Query: 174 -----------------------------------------FPSTNTFHTSSGEISLSLW 233
                                                     PSTNT HT +GE+S+SLW
Sbjct: 121 ELVVGRNTRLLYSTRLYGTVTTSLYTYDRNSDVVRAFSEAWCPSTNTLHTMAGELSISLW 180

Query: 234 DLWKLGGLPIKGRFYDETIPCCEELLRSCNEDDH-LPKSCGYIFDAYHRI-ASQQLER-- 293
           DLW   GLPIKG FY+E IP  +EL  +  +    LP +C Y+F AY+ I  +Q+ +R  
Sbjct: 181 DLWFFEGLPIKGDFYEERIPSFKELTSTSRDKTKCLPTTCQYLFQAYYSIVCTQRNDRST 240

Query: 294 -----QQISTHLWISFWFKGDSKYAKPPSRRPKKSSRPLSTHNPQ--------------- 353
                 Q++   WISFW+ G   Y KP +R+ K +SR  ST NP                
Sbjct: 241 SSKNDSQVTIGSWISFWYLGSRSYDKPTTRKQKNASRSKSTKNPDGSKIQVREWSSRESM 300

Query: 354 ------------------------------------------------------------ 413
                                                                       
Sbjct: 301 LFAELGIKDDLKDETYLAAFLSCWLCLFVFPQKGSFLRPGVFRAASLMAAGTIYSLAVPV 360

Query: 414 ---------------------------------LAH----HFKLHTLVRGPLMVYYSGEG 469
                                            LAH    H+ L T VRGP M  +SG G
Sbjct: 361 LANIYHGLALIIKASNPIRRMDFHFPMHYVHGWLAHYFGTHYPLSTEVRGPKMTNFSGGG 420

[Close]

BLAST of Lag0000533 vs. ExPASy TrEMBL
Match: A0A5A7TX42 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00950 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.4e-71
Identity = 195/607 (32.13%), Postives = 267/607 (43.99%), Query Frame = 0


Query: 54  MVHFTELSDNGKKSLVFLLDKDQP--------IKKRTQG---------QNSSI------- 113
           MV+FTE   +G + LV L D++QP        ++K   G          N+S+       
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 114 -------KVWILRSSLHEKKSNVNPELTLGRRIIENQ----------------------- 173
                    W+L+SS+H +  N    LTLG+R+IE Q                       
Sbjct: 61  VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWL 120

Query: 174 -----------------------------------------FPSTNTFHTSSGEISLSLW 233
                                                     PSTNT HT +GE+S+SLW
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180

Query: 234 DLWKLGGLPIKGRFYDETIPCCEELLRSCNEDDH-LPKSCGYIFDAYHRI-ASQQLER-- 293
           DLW  GGLPIKG FY+E IP  +EL  +  +    LP +C Y+F AY+ I  +Q+ +R  
Sbjct: 181 DLWSFGGLPIKGDFYEERIPSFKELTSTSQDKTKCLPTTCQYLFQAYYSIVCTQRNDRST 240

Query: 294 -----QQISTHLWISFWFKGDSKYAKPPSRRPKKSSRPLSTHNPQ--------------- 353
                 Q++   WISFW+ G   Y KP +R+ KK+SR  ST NP                
Sbjct: 241 SSKNDSQVTIGSWISFWYLGSKSYDKPTTRKQKKASRSKSTQNPDGSKIQAREWSSRESM 300

Query: 354 ------------------------------------------------------------ 413
                                                                       
Sbjct: 301 LFAELGIRDDLKDETVANLMAAGTIYSLAVPVLANIYHGLGLITKASNPIGRMDFHFPMH 360

Query: 414 -----LAHHFKLH----TLVRGPLMVYYSGEGGAKYFNSLEARKLIHQGTSIMWHASLSS 469
                LAH+F  H    T VRGP M  +S EGG+ YF   EAR+LIH G  I WHASL +
Sbjct: 361 YVHGWLAHYFGTHYPLPTEVRGPKMTNFSDEGGSIYFGEYEARELIHNGARIQWHASLQN 420

[Close]

BLAST of Lag0000533 vs. ExPASy TrEMBL
Match: A0A5A7UGW6 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold190G00140 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.0e-69
Identity = 188/603 (31.18%), Postives = 262/603 (43.45%), Query Frame = 0


Query: 52  VNMVHFTELSDNGKKSLVFLLDKDQP--------IKKRTQG---------QNSSI----- 111
           + MV+FTE   +G + LV   D++QP        ++K   G          N+S+     
Sbjct: 37  LTMVYFTERFLSGVRHLVIFSDRNQPREDGLSLIVEKSWAGAFADHWPRLDNNSVLPRLS 96

Query: 112 ---------KVWILRSSLHEKKSNVNPELTLGRRIIENQ--------------------- 171
                      W+L+SS+H +  N    LTLG+ +IE Q                     
Sbjct: 97  MEVPLSEGKSAWVLQSSIHNEAPNSGRALTLGQHLIEGQTRWGTVTKVPGEFCFTDYYWE 156

Query: 172 -----------FPSTNTFHTSSGEISLSLWDLWKLGGLPIKGRFYDETIPCCEELLRSCN 231
                       PSTNT HT +GE+S+SLWDLW   GLPIKG FY+E IP  +EL  +  
Sbjct: 157 CDVVRAFCEAWCPSTNTLHTMAGELSISLWDLWSFRGLPIKGDFYEERIPSFKELTSTSR 216

Query: 232 EDDH-LPKSCGYIFDAYHRI-ASQQLER-------QQISTHLWISFWFKGDSKYAKPPSR 291
           +    LP +C Y F AY+ I  +Q+ +R        Q++   WISFW+ G   Y KP +R
Sbjct: 217 DKTKCLPMTCQYHFQAYYSIVCTQRNDRSASSKNDSQVTIGSWISFWYLGSKSYDKPTTR 276

Query: 292 RPKKSSRPLSTHNPQ--------------------------------------------- 351
           + KK+SR  ST NP                                              
Sbjct: 277 KQKKASRSKSTQNPDGSKIQAREWSSRESMLFAELGIRDDLKDETYLAAFLSCWLCLFVF 336

Query: 352 ------------------------------------------------------------ 411
                                                                       
Sbjct: 337 PQKGSFLRLGVFRVASLMAAGTIYSLAVPVLANIYHGLGLITKASNPIGRMDFHFPMHYV 396

Query: 412 ---LAHHFKLH----TLVRGPLMVYYSGEGGAKYFNSLEARKLIHQGTSIMWHASLSSKN 469
              LAH+F  H      VRGP M  +SGEGG+ YF   EAR+LIH G  I WHA+L ++N
Sbjct: 397 HGWLAHYFGTHYPLPREVRGPKMTNFSGEGGSIYFGEYEARELIHNGVRIQWHANLHNRN 456

[Close]

BLAST of Lag0000533 vs. ExPASy TrEMBL
Match: A0A5A7SHN8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1204G00400 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.6e-68
Identity = 192/607 (31.63%), Postives = 263/607 (43.33%), Query Frame = 0


Query: 54  MVHFTELSDNGKKSLVFLLDKDQP--------IKKRTQG---------QNSSI------- 113
           MV+FTE   +G + LV L D++QP        ++K   G          N+SI       
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLNNNSILPRLFME 60

Query: 114 -------KVWILRSSLHEKKSNVNPELTLGRRII-------------------------- 173
                    WIL+SS+H +  N    LTLG+R+I                          
Sbjct: 61  IPLSEGKSAWILQSSIHNEAHNSGRALTLGQRLIEVGRNTRLLYSTRLYGIVTASLYTYD 120

Query: 174 ----------ENQFPSTNTFHTSSGEISLSLWDLWKLGGLPIKGRFYDETIPCCEELLRS 233
                     E   PSTNT HT +GE+S+SLWDLW  GGLPIKG FY+E IP  +EL  +
Sbjct: 121 RNSDVVRAFCEAWCPSTNTLHTMTGELSISLWDLWSFGGLPIKGDFYEERIPSFKELTST 180

Query: 234 CNEDDH-LPKSCGYIFDAYHRI-ASQQLER-------QQISTHLWISFWFKGDSKYAKPP 293
             +    LP +C Y+F AY+ I  +Q+ +R        Q++   WISFW+ G   Y KP 
Sbjct: 181 SRDKTKCLPTTCQYLFQAYYSIVCTQRNDRSASSKNDSQVTIGSWISFWYLGSRSYDKPT 240

Query: 294 SRRPKKSSRPLSTHNPQ------------------------------------------- 353
           +R+ KK+S   ST NP                                            
Sbjct: 241 TRKQKKASHSKSTQNPDGSKIQAHEWSSRESMLFAELGIKDDLKDETYLAAFLSCWLCLF 300

Query: 354 ------------------------------------------------------------ 413
                                                                       
Sbjct: 301 IFPQKGSFLRPGVFRAASLMAACTIYSLAVPVLANIYHGLGLITKASNPIGRMDFHFPMH 360

Query: 414 -----LAHHFKLH----TLVRGPLMVYYSGEGGAKYFNSLEARKLIHQGTSIMWHASLSS 469
                LAH+F  H    T VRGP M  +SGEGG+ YF   EAR+LIH G  I WHA+L +
Sbjct: 361 YVHGWLAHYFGTHYPLPTEVRGPKMTNFSGEGGSIYFGEYEARELIHNGARIQWHANLQN 420

[Close]

BLAST of Lag0000533 vs. ExPASy TrEMBL
Match: A0A5A7U8L3 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001600 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 4.7e-62
Identity = 188/635 (29.61%), Postives = 261/635 (41.10%), Query Frame = 0


Query: 54  MVHFTELSDNGKKSLVFLLDKDQP--------IKKRTQG---------QNSSI------- 113
           MV+FTE   +G + LV L D++QP        ++K   G          N+S+       
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIMEKPWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 114 -------KVWILRSSLHEKKSNVNPELTLGRRIIENQ----------------------- 173
                    WIL+SS+H +  N    LTLG+R+IE Q                       
Sbjct: 61  IPLSEGKSAWILQSSIHNEAPNSGRALTLGQRLIEGQTRWGTMTKVPGEFCFTDCYWEWL 120

Query: 174 -----------------------------------------FPSTNTFHTSSGEISLSLW 233
                                                     PSTNT HT +GE+S+SLW
Sbjct: 121 ELVVGRNTRLLYSTRLYGTVTTSLYTYDRNSDVVRAFSEAWCPSTNTLHTMAGELSISLW 180

Query: 234 DLWKLGGLPIKGRFYDETIPCCEELLRSCNEDDH-LPKSCGYIFDAYHRI-ASQQLER-- 293
           DLW   GLPIKG FY+E IP  +EL  +  +    LP +C Y+F AY+ I  +Q+ +R  
Sbjct: 181 DLWFFEGLPIKGDFYEERIPSFKELTSTSRDKTKCLPTTCQYLFQAYYSIVCTQRNDRST 240

Query: 294 -----QQISTHLWISFWFKGDSKYAKPPSRRPKKSSRPLSTHNPQ--------------- 353
                 Q++   WISFW+ G   Y KP +R+ K +SR  ST NP                
Sbjct: 241 SSKNDSQVTIGSWISFWYLGSRSYDKPTTRKQKNASRSKSTKNPDGSKIQVREWSSRESM 300

Query: 354 ------------------------------------------------------------ 413
                                                                       
Sbjct: 301 LFAELGIKDDLKDETYLAAFLSCWLCLFVFPQKGSFLRPGVFRAASLMAAGTIYSLAVPV 360

Query: 414 ---------------------------------LAH----HFKLHTLVRGPLMVYYSGEG 469
                                            LAH    H+ L T VRGP M  +SG G
Sbjct: 361 LANIYHGLALIIKASNPIRRMDFHFPMHYVHGWLAHYFGTHYPLSTEVRGPKMTNFSGGG 420

[Close]

BLAST of Lag0000533 vs. ExPASy TrEMBL
Match: A0A5A7TFC8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G00910 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.5e-52
Identity = 171/613 (27.90%), Postives = 241/613 (39.31%), Query Frame = 0


Query: 54  MVHFTELSDNGKKSLVFLLDKDQP--------IKKRTQG---------QNSSI------- 113
           MV+FTE   +G + LV L D++QP        ++K   G          N+S+       
Sbjct: 17  MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKLWAGAFADHWPRLDNNSVLPRLSVE 76

Query: 114 -------KVWILRSSLHEKKSNVNPELTLGRRIIENQ----------------------- 173
                    W+L+SS+H +  N    LTLG+R+IE Q                       
Sbjct: 77  VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWL 136

Query: 174 -----------------------------------------FPSTNTFHTSSGEISLSLW 233
                                                     PSTNT HT +GE+S+SLW
Sbjct: 137 ELVVGRNTRLLYSTHLYSVVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 196

Query: 234 DLWKLGGLPIKGRFYDETIPCCEELLRSCNEDDH-LPKSCGYIFDAYHRI-ASQQLER-- 293
           DLW   GLPIKG FY+E IP  +EL  +  +    LP +C Y+F AY+ I  +Q+ +R  
Sbjct: 197 DLWSFRGLPIKGDFYEEMIPSFKELTSTSRDKTKCLPTACQYLFQAYYSIVCTQRNDRSA 256

Query: 294 -----QQISTHLWISFWFKGDSKYAKPPSRRPKKSSRPLSTHNPQ--------------- 353
                 Q++   WISFW+ G   Y KP +R+ KK SR  ST NP                
Sbjct: 257 SSKNDSQVTIGSWISFWYLGSRSYDKPTTRKQKKVSRSKSTQNPDGSKIQAPAFLSCWLC 316

Query: 354 ------------------------------------------------------------ 413
                                                                       
Sbjct: 317 LFVSPQKGSFLRPGVFRAASLMAASTIYSLAVPVLANIYHGLGLITKASNPIGCMDFHFP 376

Query: 414 -------LAHHFKLH----TLVRGPLMVYYSGEGGAKYFNSLEARKLIHQGTSIMWHASL 473
                  LAH+F  H    T VRGP M  +SG+ G+ YF   +AR+LIH G  I WHA+L
Sbjct: 377 MHYVHGWLAHYFGTHYPLPTEVRGPKMTNFSGKSGSIYFGEYKARELIHNGARIQWHANL 436

The following BLAST results are available for this feature:

BLAST of Lag0000533 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031745312.1	2.3e-79	32.74	uncharacterized protein LOC116405439 [Cucumis sativus]	[more]
KAA0047478.1	3.0e-71	32.13	hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]	[more]
KAA0053466.1	6.2e-69	31.18	hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]	[more]
KAA0025356.1	5.3e-68	31.63	hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa]	[more]
KAA0050516.1	9.6e-62	29.61	hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]	[more]

BLAST of Lag0000533 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0000533 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TX42	1.4e-71	32.13	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UGW6	3.0e-69	31.18	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5A7SHN8	2.6e-68	31.63	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5A7U8L3	4.7e-62	29.61	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5A7TFC8	1.5e-52	27.90	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]

BLAST of Lag0000533 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 419..496
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 422..438
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 445..471
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 473..496
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..231
None	No IPR available	PANTHER	PTHR36607:SF20	1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4	coord: 121..189 coord: 237..487
None	No IPR available	PANTHER	PTHR36607	1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4	coord: 121..189
None	No IPR available	PANTHER	PTHR36607	1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4	coord: 237..487

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0000533.1	Lag0000533.1	mRNA