Lag0000514 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0000514
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	CCHC-type domain-containing protein
Location	chr4: 9376599 .. 9378087 (+)
RNA-Seq Expression	Lag0000514
Synteny	Lag0000514

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGACTTAGTTAGTCGATGGAACTCGTGGAGATTGACAGAGGAGGAGGCGGAGATGGTACGGCCAGGGGAGGGGACACCGGTTCTGTCAATGGGCTCGATAGAGATGTGTGTGATAGGTAAAGTCTTCTCCTCGAAGCGAGTGAATGTGGAGGCGTTTCGAAGTGTTATGAGGGCAGCATGGAGAGTGCATGGGGCGACGCGCATAGAATCTGCGGGTGAAAATTTATTTGCTATTCAGTTCCGTTCTAGAGGGGAAAGGGGCGTGTGATGTCGACAGGTCCATGGGCTTTTGACCGGTCTCTGGTGGTTCTGAAAGAGCCGAGGTCTGCAGGATCGGTTTTGGATGTGGAGTTTAATGATTGCGCCTTTTGGGTGCAGATTCATAATGTCCCTATGCGTTGGCAGACGAGGGAGATGGCTCGACAGTTGGGCGATAAGATCGGAACCGTGGAGGAAGTTGGTGGATTGCAGGGTGGTGAGTGGACAGGGCCGATTCTTCGAATAAGGGTTCTTTTGAGGATGGATCGTCCTCTCAGGAGGGGGATCCGGTTGCAGGATGAGGAGGGCAAGGAGTTTCAATGTTCGGTCTTGTATGAGCGACTACCAGATTTTTGTTACGACTGTGGCTGTTGGGGCACTCGAGAAGGGAGTGTGGTGTGGTTAGGGAGGGTGCTTTGGAGCAGTAGGGTGAGCAATATGGTGATTGGCTGAGAGCAGGTGCGGGGCCTGGGGAGACTGGGAGGCAGACTCAGGAGGGAGGGATGGATAATGCAGCGAGTCGAAAGCCTGAGACCCCAAAGCCCTCCACTAAGGGACAGGTGATCCATGTTCTGTTCCTGAGAATGCGGGGAAGGAGATTGCTAATGCTTCTGGGGAGGGCGTGGAAGTCCAGGTTAGTGAGCAGGGGGACCAGGGGAAGGAGAGTAGTGGAGAGGGGGTCAGCGTGGTTGTGGTAACAAGGGGGGAGGGGTTGGCTGATAAGGGAATGGGGAAGCAGAATGTGGGGTGTGTTACGGAGGAAAGTGGGGTAAGTGAGAGGGGGAAGCAGAAGGTGGGGTGTGTCACGGAGGTTAGTGGGGTGAGTGAGGGGGGAGTGATGGGATGTTGGTTGACTCTGTGGGACAGGGAGGAGGGTTAGAAGTGATGGGGAAAGGGGGAGGTGGTCGGAACTGGAAGAGGAGGGCGAGGATGTCTTGTCTGATGTTACCAATCGAGATGTCTCTCTGGTGTTTGTTAATGGTAAGAGGAAGGCAAAGAGTGTGGAGGGTGTGGAGCTGGGGGGAAAGAAGTTGAAAGGGGGGGAGTAGAAGGAGTTGGTTTAGATGTACCTGATGTGACTGATTTGGCGGTGGCTAGGTCCCAGCCCCGCCGGAGATTATGAGTTTGATTTTCTGGAATGTTCGGGGGTCGGGGTCACCTCGGACATTCAGGCGCCTGACCAAGCTAGTTTAGGAGAAACGACCTCAGGTGCTCTTCTTATCTGA

mRNA sequence

ATGGATGACTTAGTTAGTCGATGGAACTCGTGGAGATTGACAGAGGAGGAGGCGGAGATGGTACGGCCAGGGGAGGGGACACCGGTTCTGTCAATGGGCTCGATAGAGATGTGTGTGATAGGTAAAGTCTTCTCCTCGAAGCGAGTGAATGTGGAGGCGTTTCGAAGTGTTATGAGGGCAGCATGGAGAGTGCATGGGGCGACGCGCATAGAATCTGCGGGTCCATGGGCTTTTGACCGGTCTCTGGTGGTTCTGAAAGAGCCGAGGTCTGCAGGATCGGTTTTGGATGTGGAGTTTAATGATTGCGCCTTTTGGGTGCAGATTCATAATGTCCCTATGCGTTGGCAGACGAGGGAGATGGCTCGACAGTTGGGCGATAAGATCGGAACCGTGGAGGAAGTTGGTGGATTGCAGGGTGGTGAGTGGACAGGGCCGATTCTTCGAATAAGGGTTCTTTTGAGGATGGATCGTCCTCTCAGGAGGGGGATCCGGTTGCAGGATGAGGAGGGCAAGGAGTTTCAATGTTCGGTCTTGTATGAGCGACTACCAGATTTTTGTTACGACTGTGGCTGTTGGGGCACTCGAGAAGGGAGTGTGGTGTGGTTAGGGAGGGTGCTTTGGAGCAGTGATCCATGTTCTGTTCCTGAGAATGCGGGGAAGGAGATTGCTAATGCTTCTGGGGAGGGCGTGGAAGTCCAGGTTAGTGAGCAGGGGGACCAGGGGAAGGAGAGTAGTGGAGAGGGGGTCAGCGTGGTTGTGGTAACAAGGGGGGAGGGGTTGGCTGATAAGGGAATGGGGAAGCAGAATGTGGGGTGTGTTACGGAGGAAAGTGGGGTAAGGAGGAGGGTTAGAAGTGATGGGGAAAGGGGGAGGTGGTCGGAACTGGAAGAGGAGGGCGAGGATGTCTTGTCTGATGTTACCAATCGAGATGTCTCTCTGGTGTTTGTTAATGGTCCCAGCCCCGCCGGAGATTATGAGTTTGATTTTCTGGAATGTTCGGGGGTCGGGGTCACCTCGGACATTCAGGCGCCTGACCAAGCTAGTTTAGGAGAAACGACCTCAGGTGCTCTTCTTATCTGA

Coding sequence (CDS)

ATGGATGACTTAGTTAGTCGATGGAACTCGTGGAGATTGACAGAGGAGGAGGCGGAGATGGTACGGCCAGGGGAGGGGACACCGGTTCTGTCAATGGGCTCGATAGAGATGTGTGTGATAGGTAAAGTCTTCTCCTCGAAGCGAGTGAATGTGGAGGCGTTTCGAAGTGTTATGAGGGCAGCATGGAGAGTGCATGGGGCGACGCGCATAGAATCTGCGGGTCCATGGGCTTTTGACCGGTCTCTGGTGGTTCTGAAAGAGCCGAGGTCTGCAGGATCGGTTTTGGATGTGGAGTTTAATGATTGCGCCTTTTGGGTGCAGATTCATAATGTCCCTATGCGTTGGCAGACGAGGGAGATGGCTCGACAGTTGGGCGATAAGATCGGAACCGTGGAGGAAGTTGGTGGATTGCAGGGTGGTGAGTGGACAGGGCCGATTCTTCGAATAAGGGTTCTTTTGAGGATGGATCGTCCTCTCAGGAGGGGGATCCGGTTGCAGGATGAGGAGGGCAAGGAGTTTCAATGTTCGGTCTTGTATGAGCGACTACCAGATTTTTGTTACGACTGTGGCTGTTGGGGCACTCGAGAAGGGAGTGTGGTGTGGTTAGGGAGGGTGCTTTGGAGCAGTGATCCATGTTCTGTTCCTGAGAATGCGGGGAAGGAGATTGCTAATGCTTCTGGGGAGGGCGTGGAAGTCCAGGTTAGTGAGCAGGGGGACCAGGGGAAGGAGAGTAGTGGAGAGGGGGTCAGCGTGGTTGTGGTAACAAGGGGGGAGGGGTTGGCTGATAAGGGAATGGGGAAGCAGAATGTGGGGTGTGTTACGGAGGAAAGTGGGGTAAGGAGGAGGGTTAGAAGTGATGGGGAAAGGGGGAGGTGGTCGGAACTGGAAGAGGAGGGCGAGGATGTCTTGTCTGATGTTACCAATCGAGATGTCTCTCTGGTGTTTGTTAATGGTCCCAGCCCCGCCGGAGATTATGAGTTTGATTTTCTGGAATGTTCGGGGGTCGGGGTCACCTCGGACATTCAGGCGCCTGACCAAGCTAGTTTAGGAGAAACGACCTCAGGTGCTCTTCTTATCTGA

Protein sequence

MDDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIESAGPWAFDRSLVVLKEPRSAGSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQDEEGKEFQCSVLYERLPDFCYDCGCWGTREGSVVWLGRVLWSSDPCSVPENAGKEIANASGEGVEVQVSEQGDQGKESSGEGVSVVVVTRGEGLADKGMGKQNVGCVTEESGVRRRVRSDGERGRWSELEEEGEDVLSDVTNRDVSLVFVNGPSPAGDYEFDFLECSGVGVTSDIQAPDQASLGETTSGALLI

Homology

[Close]

BLAST of Lag0000514 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 203.4 bits (516), Expect = 3.4e-48
Identity = 89/211 (42.18%), Postives = 132/211 (62.56%), Query Frame = 0


Query: 1   MDDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRA 60
           MD++   W  ++ T +E E V    G P+L+  ++++CV+ K+ +SKR++ EA RSVM++
Sbjct: 1   MDEITDLWEHFKSTNDENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKS 60

Query: 61  AWRVHGATRIE---------------------SAGPWAFDRSLVVLKEPRSAGSVLDVEF 120
            WRVH +TR E                     S+GPW F++SL+VL  P +    LD+ F
Sbjct: 61  VWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNF 120

Query: 121 NDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPL 180
           N CAFW+QIHN+P    + EMA  LG K+G VEE+ G     W GP +R+RV + + +PL
Sbjct: 121 NFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPL 180

Query: 181 RRGIRLQDEEGKEFQCSVLYERLPDFCYDCG 191
           RRGI+L++ +GK+  C + YE+LPDFCY+CG
Sbjct: 181 RRGIKLKNSDGKDIWCPLRYEKLPDFCYECG 211

[Close]

BLAST of Lag0000514 vs. NCBI nr
Match: XP_022156711.1 (uncharacterized protein LOC111023555 [Momordica charantia])

HSP 1 Score: 195.7 bits (496), Expect = 7.0e-46
Identity = 86/214 (40.19%), Postives = 132/214 (61.68%), Query Frame = 0


Query: 1   MDDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRA 60
           MDD+   W ++ L +EE + +      P+L++ +I++C +GK+  SKR+ VEAF SVM+ 
Sbjct: 1   MDDITKLWENFTLIKEEEDTIVIDNQKPILTVDNIQLCAVGKLHPSKRITVEAFASVMKQ 60

Query: 61  AWRVHGATRIESA---------------------GPWAFDRSLVVLKEPRSAGSVLDVEF 120
            W++H +TRIE+A                     GPW FD+SL++L    +A   LD++ 
Sbjct: 61  VWKIHNSTRIETAGLNIYVIAFKTMAEKIRVFSLGPWTFDKSLLILVPTTAANKPLDIDI 120

Query: 121 NDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPL 180
           + CAFWVQIH +     T++MA+ LG ++G VEEV G+   +W  P L +RV + + +PL
Sbjct: 121 SLCAFWVQIHYITFECMTKDMAKFLGARLGEVEEVDGMSSYDWVRPFLWVRVKINVLKPL 180

Query: 181 RRGIRLQDEEGKEFQCSVLYERLPDFCYDCGCWG 194
           RRG++++  +GK+  C + YERLPDFCY CGC G
Sbjct: 181 RRGLKVKTSDGKDIWCPLRYERLPDFCYGCGCVG 214

[Close]

BLAST of Lag0000514 vs. NCBI nr
Match: XP_022155933.1 (uncharacterized protein LOC111022932 [Momordica charantia])

HSP 1 Score: 154.1 bits (388), Expect = 2.3e-33
Identity = 71/201 (35.32%), Postives = 119/201 (59.20%), Query Frame = 0


Query: 1   MDDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRA 60
           MD++   W ++ LT+E+ E +      P+++  +++   +GK+ +SKR++VEAFRSVM++
Sbjct: 1   MDEITELWENFTLTKEKEETIIIDSEKPLMTPENVQRYAVGKLHTSKRISVEAFRSVMKS 60

Query: 61  AWRVHGATRIESA---------------------GPWAFDRSLVVLKEPRSAGSVLDVEF 120
            W+VH +T IE+A                     GPW+F+ SL+VL  P +     D+ F
Sbjct: 61  LWKVHESTHIETAGMNLYVIVFKSMAEKNRVLTSGPWSFETSLLVLTSPTATDQPRDMNF 120

Query: 121 NDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPL 180
           N  A W+QIH +P +   ++MA+ LG +IG VEE+      EWTGP +R+RV + + +P 
Sbjct: 121 NFFALWIQIHCIPFQCMIKDMAKFLGTRIGEVEEIDCNGSYEWTGPFIRVRVQIDISKPF 180

[Close]

BLAST of Lag0000514 vs. NCBI nr
Match: XP_006485824.1 (uncharacterized protein LOC102613298 [Citrus sinensis])

HSP 1 Score: 144.4 bits (363), Expect = 1.9e-30
Identity = 70/213 (32.86%), Postives = 112/213 (52.58%), Query Frame = 0


Query: 2   DDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAA 61
           ++L+ +  +  L  EE  M+  G    V     +  C++GK+  ++ V  E  R+ M+ A
Sbjct: 4   EELIRKCEAITLQSEEDNMISFGRNMKVRGERLVAHCLVGKILQTRSVPREGLRAAMQQA 63

Query: 62  WRVHGATRIES---------------------AGPWAFDRSLVVLKEPRSAGSVLDVEFN 121
           WR    T++ES                      GPW FDRSL+V+ EP   G V   +F 
Sbjct: 64  WRTTKETKVESLGDNIFLFKFASKSEKKRILFGGPWHFDRSLMVVIEPMGIGDVKKQDFT 123

Query: 122 DCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLR 181
              FWVQIHN+P+    +E+ +++G +IG V+EV     GE  G  +R+R+++ + RPL 
Sbjct: 124 HALFWVQIHNIPIMCMDKEIIQEIGGRIGKVQEVETDDAGECMGSFVRVRIMVNVTRPLP 183

Query: 182 RGIRLQDEEGKEFQCSVLYERLPDFCYDCGCWG 194
           + + L+ E+G +    + YE+LPDFC+ CG  G
Sbjct: 184 KRLLLKLEDGGQISLRIAYEKLPDFCFCCGLIG 216

[Close]

BLAST of Lag0000514 vs. NCBI nr
Match: XP_015388532.1 (uncharacterized protein LOC107178176 [Citrus sinensis])

HSP 1 Score: 143.3 bits (360), Expect = 4.1e-30
Identity = 70/213 (32.86%), Postives = 111/213 (52.11%), Query Frame = 0


Query: 2   DDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAA 61
           ++L+ +  +  L  EE  M+  G    V     +  C++GK+  ++ V  E  R+ M+ A
Sbjct: 4   EELIRKCEAITLQSEEDNMISFGRNMKVRGERLVAHCLVGKILQTRSVPREGLRAAMQQA 63

Query: 62  WRVHGATRIES---------------------AGPWAFDRSLVVLKEPRSAGSVLDVEFN 121
           WR    T++ES                      GPW FDRSL+V+ EP   G V   +F 
Sbjct: 64  WRTTKETKVESLGDNIFIFKFASKSEKKRILFGGPWHFDRSLMVVTEPMGIGDVKKQDFT 123

Query: 122 DCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLR 181
              FWVQIHN+P+    +E+ +++G +IG V+EV     GE  G  +RIR+++ +  PL 
Sbjct: 124 HAPFWVQIHNIPIMCMDKEIIQEIGGRIGKVQEVKTYDVGECMGSFVRIRIMVNVTMPLP 183

Query: 182 RGIRLQDEEGKEFQCSVLYERLPDFCYDCGCWG 194
           + + L+ E+G +    + YE+LPDFC+ CG  G
Sbjct: 184 KRLLLKLEDGGQISLRIAYEKLPDFCFCCGLIG 216

[Close]

BLAST of Lag0000514 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.6e-48
Identity = 89/211 (42.18%), Postives = 132/211 (62.56%), Query Frame = 0


Query: 1   MDDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRA 60
           MD++   W  ++ T +E E V    G P+L+  ++++CV+ K+ +SKR++ EA RSVM++
Sbjct: 1   MDEITDLWEHFKSTNDENETVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKS 60

Query: 61  AWRVHGATRIE---------------------SAGPWAFDRSLVVLKEPRSAGSVLDVEF 120
            WRVH +TR E                     S+GPW F++SL+VL  P +    LD+ F
Sbjct: 61  VWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNF 120

Query: 121 NDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPL 180
           N CAFW+QIHN+P    + EMA  LG K+G VEE+ G     W GP +R+RV + + +PL
Sbjct: 121 NFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPL 180

Query: 181 RRGIRLQDEEGKEFQCSVLYERLPDFCYDCG 191
           RRGI+L++ +GK+  C + YE+LPDFCY+CG
Sbjct: 181 RRGIKLKNSDGKDIWCPLRYEKLPDFCYECG 211

[Close]

BLAST of Lag0000514 vs. ExPASy TrEMBL
Match: A0A6J1DVS4 (uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023555 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.4e-46
Identity = 86/214 (40.19%), Postives = 132/214 (61.68%), Query Frame = 0


Query: 1   MDDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRA 60
           MDD+   W ++ L +EE + +      P+L++ +I++C +GK+  SKR+ VEAF SVM+ 
Sbjct: 1   MDDITKLWENFTLIKEEEDTIVIDNQKPILTVDNIQLCAVGKLHPSKRITVEAFASVMKQ 60

Query: 61  AWRVHGATRIESA---------------------GPWAFDRSLVVLKEPRSAGSVLDVEF 120
            W++H +TRIE+A                     GPW FD+SL++L    +A   LD++ 
Sbjct: 61  VWKIHNSTRIETAGLNIYVIAFKTMAEKIRVFSLGPWTFDKSLLILVPTTAANKPLDIDI 120

Query: 121 NDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPL 180
           + CAFWVQIH +     T++MA+ LG ++G VEEV G+   +W  P L +RV + + +PL
Sbjct: 121 SLCAFWVQIHYITFECMTKDMAKFLGARLGEVEEVDGMSSYDWVRPFLWVRVKINVLKPL 180

Query: 181 RRGIRLQDEEGKEFQCSVLYERLPDFCYDCGCWG 194
           RRG++++  +GK+  C + YERLPDFCY CGC G
Sbjct: 181 RRGLKVKTSDGKDIWCPLRYERLPDFCYGCGCVG 214

[Close]

BLAST of Lag0000514 vs. ExPASy TrEMBL
Match: A0A6J1DP89 (uncharacterized protein LOC111022932 OS=Momordica charantia OX=3673 GN=LOC111022932 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.1e-33
Identity = 71/201 (35.32%), Postives = 119/201 (59.20%), Query Frame = 0


Query: 1   MDDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRA 60
           MD++   W ++ LT+E+ E +      P+++  +++   +GK+ +SKR++VEAFRSVM++
Sbjct: 1   MDEITELWENFTLTKEKEETIIIDSEKPLMTPENVQRYAVGKLHTSKRISVEAFRSVMKS 60

Query: 61  AWRVHGATRIESA---------------------GPWAFDRSLVVLKEPRSAGSVLDVEF 120
            W+VH +T IE+A                     GPW+F+ SL+VL  P +     D+ F
Sbjct: 61  LWKVHESTHIETAGMNLYVIVFKSMAEKNRVLTSGPWSFETSLLVLTSPTATDQPRDMNF 120

Query: 121 NDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPL 180
           N  A W+QIH +P +   ++MA+ LG +IG VEE+      EWTGP +R+RV + + +P 
Sbjct: 121 NFFALWIQIHCIPFQCMIKDMAKFLGTRIGEVEEIDCNGSYEWTGPFIRVRVQIDISKPF 180

[Close]

BLAST of Lag0000514 vs. ExPASy TrEMBL
Match: A0A5C7I1Z5 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_010517 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 6.4e-29
Identity = 72/200 (36.00%), Postives = 110/200 (55.00%), Query Frame = 0


Query: 13  LTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIE- 72
           + +E++E+ +  EG     +  +   ++GKV SS+RVN EAF+S++   W   G   IE 
Sbjct: 15  IRDEDSEIHQISEGLERDGVEDVNHYLVGKVLSSRRVNREAFKSIIEQLWSPFGTVDIEV 74

Query: 73  --------------------SAGPWAFDRSLVVLKEPRSAGSVLDVEFNDCAFWVQIHNV 132
                               + GPW FDRSL+VL++P   G++  + F+   FWVQIH++
Sbjct: 75  VGENIFMFYFNNPIDRDRIWNRGPWHFDRSLIVLEKPEGTGNISQLSFSRAEFWVQIHDI 134

Query: 133 PMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQ-DEEG 191
           P+    R MAR L ++IG V ++       W G  L++RVL+ + RPL+R +RL+ D  G
Sbjct: 135 PIMCMNRRMARWLAEQIGEVIDIPTESMDCW-GKYLKVRVLIDISRPLKRWLRLKLDNSG 194

[Close]

BLAST of Lag0000514 vs. ExPASy TrEMBL
Match: A0A1S8AC25 (CCHC-type domain-containing protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-28
Identity = 71/212 (33.49%), Postives = 111/212 (52.36%), Query Frame = 0


Query: 2   DDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAA 61
           ++L+ R  + RL++EE   V       +     +  C++GKV  ++ V++E  +  M+  
Sbjct: 4   EELIKRCRAIRLSDEEGGRVSFKNRMKINGEKILAGCLVGKVLHTREVSIEGLKMAMQRV 63

Query: 62  WRVHGATRIES---------------------AGPWAFDRSLVVLKEPRSAGSVLDVEFN 121
           WR     +IE                       GPW FDR+L+ L EP   G +   +F+
Sbjct: 64  WRTSREVKIEKLGENVFMFKFGSEVDKRSIMVGGPWHFDRALIGLTEPTGIGDIKKQDFS 123

Query: 122 DCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLR 181
             +FWVQIH+VP+   +++MA +LG  IG VEEV     GE  G  LR+R+ + + +PL+
Sbjct: 124 HVSFWVQIHDVPIMCMSKDMAAELGKVIGKVEEVETDAAGECFGQFLRLRISVDITKPLK 183

Query: 182 RGIRLQDEE--GKEFQCSVLYERLPDFCYDCG 191
           + I L+ EE    +    V+YERLPDFC+ CG
Sbjct: 184 KIIELEQEEEDADDIPMRVMYERLPDFCFCCG 215

[Close]

BLAST of Lag0000514 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 45.4 bits (106), Expect = 1.1e-04
Identity = 18/56 (32.14%), Postives = 32/56 (57.14%), Query Frame = 0


Query: 74  GPWAFDRSLVVLKEPRSAGSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIG 130
           GPW+F+  + V++      S  D EF    FW+QI  +P+R+ T  +   +G+++G
Sbjct: 79  GPWSFNDWMCVIQRWTKLHS--DAEFKRIPFWIQIRGIPLRFLTARIITSIGERMG 132

The following BLAST results are available for this feature:

BLAST of Lag0000514 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149484.1	3.4e-48	42.18	uncharacterized protein LOC111017902 [Momordica charantia]	[more]
XP_022156711.1	7.0e-46	40.19	uncharacterized protein LOC111023555 [Momordica charantia]	[more]
XP_022155933.1	2.3e-33	35.32	uncharacterized protein LOC111022932 [Momordica charantia]	[more]
XP_006485824.1	1.9e-30	32.86	uncharacterized protein LOC102613298 [Citrus sinensis]	[more]
XP_015388532.1	4.1e-30	32.86	uncharacterized protein LOC107178176 [Citrus sinensis]	[more]

BLAST of Lag0000514 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0000514 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D765	1.6e-48	42.18	uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1DVS4	3.4e-46	40.19	uncharacterized protein LOC111023555 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DP89	1.1e-33	35.32	uncharacterized protein LOC111022932 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A5C7I1Z5	6.4e-29	36.00	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_010517 PE=4 SV=1	[more]
A0A1S8AC25	1.1e-28	33.49	CCHC-type domain-containing protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1	[more]

BLAST of Lag0000514 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42140.1	1.1e-04	32.14	zinc ion binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 157..193 e-value: 5.3E-9 score: 35.6
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 67..134 e-value: 6.4E-7 score: 29.0
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 70..197
None	No IPR available	PANTHER	PTHR31286:SF84	SUBFAMILY NOT NAMED	coord: 70..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0000514.1	Lag0000514.1	mRNA