Lag0000513 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0000513
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr4: 9375813 .. 9376550 (-)
RNA-Seq ExpressionLag0000513
SyntenyLag0000513
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACACACACCAACCAAACAACCACCGAACACAGACACACCCCACAATCAAACAATCACACCTTACTACCCAAACTCAGATCCTGCCAGAACACAAGACACTATCAGACCACACCCTAGTACCAAACACAGACACTGCCAGAACACAAACCTGCAACCAAACACAACCCCTGCCAGAAAACCCAACCCGCTGCCAAAACCCTGTCAGCGCACAGACCCACTTTGTTACCACCACACGAAGCCACCCTCGCAAACCTGCCGTAACAAACCCAAATCACGCCCCAAATCAAGCGATAAGGCTCGACTCATCTGGGGAACACCAAACCCACCGCCCGCTCAGACCAACCGACCACCCCTCACGCCGACCCGCCTCCGTCGCAACCAGCCGCCACAAATCTGCCCAAGAAACCCCCCCCGTACCTGTCGCCGCTGCACGCCACAGACCTGCGCAAGAAGGCCACCCCACACCACACCGCACGCCGCCGGAGAAACCGCCACCGCCACCGGATCGAAGCCTCGCCTCCACCGCCGCACACCACAGATCTGCTCAAGAAACCAGCCCTCACCTGTCTCCGCCGCAGCCACAGATCTGCGCACGAAAAACCCTCCACACACCGCGCCGCACGCCACCGAGGAAGCACCGCCACCGCCAAACCTCCGCCGCTCCGCCTCCACCGCAGACCAACCGCGCCGCCACCCCTCAGCCTCCAACTCACCGAAACCCTAAACCCCAATAA

mRNA sequence

ATGCACACACACCAACCAAACAACCACCGAACACAGACACACCCCACAATCAAACAATCACACCTTACTACCCAAACTCAGATCCTGCCAGAACACAAGACACTATCAGACCACACCCTAGTACCAAACACAGACACTGCCAGAACACAAACCTGCAACCAAACACAACCCCTGCCAGAAAACCCAACCCGCTGCCAAAACCCTGTCAGCGCACAGACCCACTTTGTTACCACCACACGAAGCCACCCTCGCAAACCTGCCGTAACAAACCCAAATCACGCCCCAAATCAAGCGATAAGGCTCGACTCATCTGGGGAACACCAAACCCACCGCCCGCTCAGACCAACCGACCACCCCTCACGCCGACCCGCCTCCGTCGCAACCAGCCGCCACAAATCTGCCCAAGAAACCCCCCCCGTACCTGTCGCCGCTGCACGCCACAGACCTGCGCAAGAAGGCCACCCCACACCACACCGCACGCCGCCGGAGAAACCGCCACCGCCACCGGATCGAAGCCTCGCCTCCACCGCCGCACACCACAGATCTGCTCAAGAAACCAGCCCTCACCTGTCTCCGCCGCAGCCACAGATCTGCGCACGAAAAACCCTCCACACACCGCGCCGCACGCCACCGAGGAAGCACCGCCACCGCCAAACCTCCGCCGCTCCGCCTCCACCGCAGACCAACCGCGCCGCCACCCCTCAGCCTCCAACTCACCGAAACCCTAAACCCCAATAA

Coding sequence (CDS)

ATGCACACACACCAACCAAACAACCACCGAACACAGACACACCCCACAATCAAACAATCACACCTTACTACCCAAACTCAGATCCTGCCAGAACACAAGACACTATCAGACCACACCCTAGTACCAAACACAGACACTGCCAGAACACAAACCTGCAACCAAACACAACCCCTGCCAGAAAACCCAACCCGCTGCCAAAACCCTGTCAGCGCACAGACCCACTTTGTTACCACCACACGAAGCCACCCTCGCAAACCTGCCGTAACAAACCCAAATCACGCCCCAAATCAAGCGATAAGGCTCGACTCATCTGGGGAACACCAAACCCACCGCCCGCTCAGACCAACCGACCACCCCTCACGCCGACCCGCCTCCGTCGCAACCAGCCGCCACAAATCTGCCCAAGAAACCCCCCCCGTACCTGTCGCCGCTGCACGCCACAGACCTGCGCAAGAAGGCCACCCCACACCACACCGCACGCCGCCGGAGAAACCGCCACCGCCACCGGATCGAAGCCTCGCCTCCACCGCCGCACACCACAGATCTGCTCAAGAAACCAGCCCTCACCTGTCTCCGCCGCAGCCACAGATCTGCGCACGAAAAACCCTCCACACACCGCGCCGCACGCCACCGAGGAAGCACCGCCACCGCCAAACCTCCGCCGCTCCGCCTCCACCGCAGACCAACCGCGCCGCCACCCCTCAGCCTCCAACTCACCGAAACCCTAAACCCCAATAA

Protein sequence

MHTHQPNNHRTQTHPTIKQSHLTTQTQILPEHKTLSDHTLVPNTDTARTQTCNQTQPLPENPTRCQNPVSAQTHFVTTTRSHPRKPAVTNPNHAPNQAIRLDSSGEHQTHRPLRPTDHPSRRPASVATSRHKSAQETPPVPVAAARHRPAQEGHPTPHRTPPEKPPPPPDRSLASTAAHHRSAQETSPHLSPPQPQICARKTLHTPRRTPPRKHRHRQTSAAPPPPQTNRAATPQPPTHRNPKPQ
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0000513.1Lag0000513.1mRNA