Lag0000497 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0000497
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr4: 8954870 .. 8955938 (-)
RNA-Seq ExpressionLag0000497
SyntenyLag0000497
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGTTTCAGGCCTATTAGCTTGTGTAACGTGATCTATAAGATAATTTCAAAAGCTATAGCTAATAGGATGAAACATTTCCTCGATACTATTATCTCCCCTTGCAAGTCGGCTTTTATCCCCAGTAGACTTATTACAGACAATGTGCTGCTAGGGTTTAAATGCATTCATGCCAGAAATAGTAAAAGATCCGGAAAAGAGGGCTACATTGCTATGAAGCTGGATATGAGCAAAGCTTACGATAGGGTTGAATTGGCTTTCATTCGGAAAGTTATGGAAAGGCTTGATTTTGGAGACAGCTGGATCAAGAAAGTTATGAAGTGTGTTGAATCGGTTAGATATTCTGTTCAAATCAACGGCTTCCCCACCTCGAAATTCCAACCCGGCAGAGGGCTTCGTCAAGGAGATCCATTATCCCCCTACCTGTTTCTTTTTTGTGTAGAAGGGCTATCAGCACTGTTTAACAGTGAGGAAAACCTTTCTATGCTTAGTGGTTTAAAGATTAATAAGCTTTGTCAATCTCTAACCCATCTTTTTTTTTGCAGATGACAGCCTGATCCTGTTGAAAGCTAATCGAAGTAATTGCGAAGTGGTGAAGAAGATCCTGGGGGAATACAAAATGGCTTCGGGCCAATCCATAAACTTTGAGAAGTCGGCTTGTATGATCAGTAAAAACATTGACAGAGCCAAAGCTAAAGATCTCAGTTGCTGCCTTGGGGTTAAGCTTGTGGATTTGTTGGGGTACTATCTGGGTATGCCCTCTCAAACGGGTCGTAGGAAGCATAAAGTGTTTTGGAAGTTGAAGGAAAGAATTTGGAAGACCCTGCAAGGTTGGAAAGAACGGTTGTTCTCTATGGGAGGCAAGGAGATTCTTATCAAAGCAGTGGTCCAAGCTATCCCAACTTATACTATGAGTTGCTTTAAGCTTCCAAATCGTATTTGTGAGGAGATTAACAAGCTTTGCGCCAGATTTTGGTGGGGTTCAGTGGGAGATAAGAAAAAGGCTCATTGGTTGAATTGGAAGAAACTTTGTGCGAGCAAGGAGAATGGAGGCCTTGGTTTCTGA

mRNA sequence

ATGGATAGTTTCAGGCCTATTAGCTTGTGTAACGTGATCTATAAGATAATTTCAAAAGCTATAGCTAATAGGATGAAACATTTCCTCGATACTATTATCTCCCCTTGCAAGTCGGCTTTTATCCCCAGTAGACTTATTACAGACAATGTGCTGCTAGGGTTTAAATGCATTCATGCCAGAAATAGTAAAAGATCCGGAAAAGAGGGCTACATTGCTATGAAGCTGGATATGAGCAAAGCTTACGATAGGGTTGAATTGGCTTTCATTCGGAAAGTTATGGAAAGGCTTGATTTTGGAGACAGCTGGATCAAGAAAGTTATGAAGTGTGTTGAATCGGTTAGATATTCTGTTCAAATCAACGGCTTCCCCACCTCGAAATTCCAACCCGGCAGAGGGCTTCGTCAAGGAGATCCATTATCCCCCTACCTGTTTCTTTTTTGTGTAGAAGGGCTATCAGCACTGTTTAACAATGACAGCCTGATCCTGTTGAAAGCTAATCGAAGTAATTGCGAAGTGGTGAAGAAGATCCTGGGGGAATACAAAATGGCTTCGGGCCAATCCATAAACTTTGAGAAGTCGGCTTGTATGATCAGTAAAAACATTGACAGAGCCAAAGCTAAAGATCTCAGTTGCTGCCTTGGGGTTAAGCTTGTGGATTTGTTGGGGTACTATCTGGGTATGCCCTCTCAAACGGGTCGTAGGAAGCATAAAGTGTTTTGGAAGTTGAAGGAAAGAATTTGGAAGACCCTGCAAGGTTGGAAAGAACGGTTGTTCTCTATGGGAGGCAAGGAGATTCTTATCAAAGCAGTGGTCCAAGCTATCCCAACTTATACTATGAGTTGCTTTAAGCTTCCAAATCGTATTTGTGAGGAGATTAACAAGCTTTGCGCCAGATTTTGGTGGGGTTCAGTGGGAGATAAGAAAAAGGCTCATTGGTTGAATTGGAAGAAACTTTGTGCGAGCAAGGAGAATGGAGGCCTTGGTTTCTGA

Coding sequence (CDS)

ATGGATAGTTTCAGGCCTATTAGCTTGTGTAACGTGATCTATAAGATAATTTCAAAAGCTATAGCTAATAGGATGAAACATTTCCTCGATACTATTATCTCCCCTTGCAAGTCGGCTTTTATCCCCAGTAGACTTATTACAGACAATGTGCTGCTAGGGTTTAAATGCATTCATGCCAGAAATAGTAAAAGATCCGGAAAAGAGGGCTACATTGCTATGAAGCTGGATATGAGCAAAGCTTACGATAGGGTTGAATTGGCTTTCATTCGGAAAGTTATGGAAAGGCTTGATTTTGGAGACAGCTGGATCAAGAAAGTTATGAAGTGTGTTGAATCGGTTAGATATTCTGTTCAAATCAACGGCTTCCCCACCTCGAAATTCCAACCCGGCAGAGGGCTTCGTCAAGGAGATCCATTATCCCCCTACCTGTTTCTTTTTTGTGTAGAAGGGCTATCAGCACTGTTTAACAATGACAGCCTGATCCTGTTGAAAGCTAATCGAAGTAATTGCGAAGTGGTGAAGAAGATCCTGGGGGAATACAAAATGGCTTCGGGCCAATCCATAAACTTTGAGAAGTCGGCTTGTATGATCAGTAAAAACATTGACAGAGCCAAAGCTAAAGATCTCAGTTGCTGCCTTGGGGTTAAGCTTGTGGATTTGTTGGGGTACTATCTGGGTATGCCCTCTCAAACGGGTCGTAGGAAGCATAAAGTGTTTTGGAAGTTGAAGGAAAGAATTTGGAAGACCCTGCAAGGTTGGAAAGAACGGTTGTTCTCTATGGGAGGCAAGGAGATTCTTATCAAAGCAGTGGTCCAAGCTATCCCAACTTATACTATGAGTTGCTTTAAGCTTCCAAATCGTATTTGTGAGGAGATTAACAAGCTTTGCGCCAGATTTTGGTGGGGTTCAGTGGGAGATAAGAAAAAGGCTCATTGGTTGAATTGGAAGAAACTTTGTGCGAGCAAGGAGAATGGAGGCCTTGGTTTCTGA

Protein sequence

MDSFRPISLCNVIYKIISKAIANRMKHFLDTIISPCKSAFIPSRLITDNVLLGFKCIHARNSKRSGKEGYIAMKLDMSKAYDRVELAFIRKVMERLDFGDSWIKKVMKCVESVRYSVQINGFPTSKFQPGRGLRQGDPLSPYLFLFCVEGLSALFNNDSLILLKANRSNCEVVKKILGEYKMASGQSINFEKSACMISKNIDRAKAKDLSCCLGVKLVDLLGYYLGMPSQTGRRKHKVFWKLKERIWKTLQGWKERLFSMGGKEILIKAVVQAIPTYTMSCFKLPNRICEEINKLCARFWWGSVGDKKKAHWLNWKKLCASKENGGLGF
Homology
BLAST of Lag0000497 vs. NCBI nr
Match: XP_030923330.1 (uncharacterized protein LOC115950239 [Quercus lobata])

HSP 1 Score: 372.1 bits (954), Expect = 5.0e-99
Identity = 180/355 (50.70%), Postives = 237/355 (66.76%), Query Frame = 0

Query: 1    MDSFRPISLCNVIYKIISKAIANRMKHFLDTIISPCKSAFIPSRLITDNVLLGFKCIHAR 60
            M  FRPISLCNVIYKIISK +ANR+K  L  IIS  +SAF+P RLITDNVL+ ++ +H  
Sbjct: 902  MSEFRPISLCNVIYKIISKVLANRLKQVLPQIISSTQSAFVPGRLITDNVLVAYETLHTM 961

Query: 61   NSKRSGKEGYIAMKLDMSKAYDRVELAFIRKVMERLDFGDSWIKKVMKCVESVRYSVQIN 120
            ++++ GK+G +A+KLD+SKAYDRVE  F++ +ME++ F   WI++VM CV +  +S+ +N
Sbjct: 962  HARKKGKKGDVALKLDISKAYDRVEWHFLQSIMEKMGFPAGWIERVMSCVTTPSFSILVN 1021

Query: 121  GFPTSKFQPGRGLRQGDPLSPYLFLFCVEGLSALFN------------------------ 180
            G P    QP RG+RQGDP+SPYLFL C EGL+AL N                        
Sbjct: 1022 GKPYEMIQPSRGIRQGDPISPYLFLLCAEGLTALLNKAELNGMITGVSICRGAPKITNLM 1081

Query: 181  --NDSLILLKANRSNCEVVKKILGEYKMASGQSINFEKSACMISKNIDRAKAKDLSCCLG 240
              +DSL+  +A R+  E + +IL  Y+ ASGQSIN EKS+   S N    +   +   LG
Sbjct: 1082 FADDSLLFCQATRAEGETIAEILQIYERASGQSINLEKSSAYFSTNTSEGQKGQILEILG 1141

Query: 241  VKLVDLLGYYLGMPSQTGRRKHKVFWKLKERIWKTLQGWKERLFSMGGKEILIKAVVQAI 300
            VK VD    YLG+P+  GR K+  F +LK+R+WK LQGWK  L S  GKEILIKAV QAI
Sbjct: 1142 VKEVDRFVKYLGLPTLIGRAKYNTFSELKDRVWKKLQGWKGMLLSRAGKEILIKAVAQAI 1201

Query: 301  PTYTMSCFKLPNRICEEINKLCARFWWGSVGDKKKAHWLNWKKLCASKENGGLGF 330
            PTYTMS F++P ++C E+  LCARFWWG VG+++K HW +W KL A K+ GG+GF
Sbjct: 1202 PTYTMSVFQIPLKLCSELEALCARFWWGQVGNERKIHWKSWDKLTAPKKEGGMGF 1256

BLAST of Lag0000497 vs. NCBI nr
Match: XP_030923826.1 (uncharacterized protein LOC115950728 [Quercus lobata])

HSP 1 Score: 369.8 bits (948), Expect = 2.5e-98
Identity = 175/355 (49.30%), Postives = 238/355 (67.04%), Query Frame = 0

Query: 1   MDSFRPISLCNVIYKIISKAIANRMKHFLDTIISPCKSAFIPSRLITDNVLLGFKCIHAR 60
           M  +RPISLCNVIYKIISK +ANR+K  L  IISP +SAFIP RLITDN+++ ++C+HA 
Sbjct: 362 MSDYRPISLCNVIYKIISKVLANRLKQILPQIISPTQSAFIPGRLITDNIMVAYECLHAM 421

Query: 61  NSKRSGKEGYIAMKLDMSKAYDRVELAFIRKVMERLDFGDSWIKKVMKCVESVRYSVQIN 120
           + ++ GK+G +A+KLD+SKAYDRVE AF++ +ME++ F + WI +VM CV +  +SV IN
Sbjct: 422 HCRKKGKKGSLALKLDISKAYDRVEWAFLKGIMEKMGFPEIWIDRVMSCVSTPSFSVCIN 481

Query: 121 GFPTSKFQPGRGLRQGDPLSPYLFLFCVEGLSA--------------------------L 180
           G P     P RG+RQGDPLSPYLFL C EG ++                          L
Sbjct: 482 GKPFGNILPSRGIRQGDPLSPYLFLLCAEGFTSLLAKAELEGQIHGMSICRRAPCISNLL 541

Query: 181 FNNDSLILLKANRSNCEVVKKILGEYKMASGQSINFEKSACMISKNIDRAKAKDLSCCLG 240
           F +DSL+  KA +   +V+ ++L  Y  ASGQ INFEKS+     N + +  + +   LG
Sbjct: 542 FADDSLLFCKATQGEVQVLMEMLDLYASASGQCINFEKSSIFFGSNTEASHKERIINLLG 601

Query: 241 VKLVDLLGYYLGMPSQTGRRKHKVFWKLKERIWKTLQGWKERLFSMGGKEILIKAVVQAI 300
           VK V     YLG+P+  GR K++ F  LK+R+WK LQGWK ++ S  GKE+LIKAV Q+I
Sbjct: 602 VKEVARFESYLGLPTLIGRSKYQTFSFLKDRVWKKLQGWKGKMLSKAGKEVLIKAVAQSI 661

Query: 301 PTYTMSCFKLPNRICEEINKLCARFWWGSVGDKKKAHWLNWKKLCASKENGGLGF 330
           PTYTM  F+LP ++C E+N +CARFWWG VGD++K HW +W+ L   K++GG+GF
Sbjct: 662 PTYTMGVFQLPVKLCNELNAMCARFWWGQVGDERKIHWKSWESLAKPKKDGGMGF 716

BLAST of Lag0000497 vs. NCBI nr
Match: XP_023913142.1 (uncharacterized protein LOC112024740 [Quercus suber])

HSP 1 Score: 363.6 bits (932), Expect = 1.8e-96
Identity = 179/355 (50.42%), Postives = 229/355 (64.51%), Query Frame = 0

Query: 1   MDSFRPISLCNVIYKIISKAIANRMKHFLDTIISPCKSAFIPSRLITDNVLLGFKCIHAR 60
           M  FRPISLCNVIYKIISK +ANR+K  L  +ISP +SAF+P RLITDNVLL ++ +HA 
Sbjct: 353 MTDFRPISLCNVIYKIISKVLANRLKTILPQLISPTQSAFVPGRLITDNVLLAYETLHAM 412

Query: 61  NSKRSGKEGYIAMKLDMSKAYDRVELAFIRKVMERLDFGDSWIKKVMKCVESVRYSVQIN 120
           + ++ GK   +A+KLD+SKAYDRVE  F++ +M RL F + WI +VM CV +  +SV IN
Sbjct: 413 HGRKKGKTRALALKLDVSKAYDRVEWDFLKGMMIRLGFPEEWINRVMSCVSTPSFSVHIN 472

Query: 121 GFPTSKFQPGRGLRQGDPLSPYLFLFCVEGLSA--------------------------L 180
           G       P RGLRQGDPLSPYLFL C EG ++                          L
Sbjct: 473 GRAFGNITPSRGLRQGDPLSPYLFLLCAEGFTSLLSKAESEGRLHGVQICRRAPCISNLL 532

Query: 181 FNNDSLILLKANRSNCEVVKKILGEYKMASGQSINFEKSACMISKNIDRAKAKDLSCCLG 240
           F +DSLI  +AN+   +V+   L  Y  ASGQ INFEKS+   S N    + + +   LG
Sbjct: 533 FADDSLIFCRANQEEVQVITNTLKLYAEASGQCINFEKSSAYFSSNTSEGQRQQIKQALG 592

Query: 241 VKLVDLLGYYLGMPSQTGRRKHKVFWKLKERIWKTLQGWKERLFSMGGKEILIKAVVQAI 300
           V+ VD    YLG+P+  GR K++ F  LKER+WK LQGW+ RL S  GKE+LIKAV Q+I
Sbjct: 593 VREVDRFDSYLGLPTLIGRSKYQTFAYLKERVWKKLQGWRGRLLSWAGKEVLIKAVAQSI 652

Query: 301 PTYTMSCFKLPNRICEEINKLCARFWWGSVGDKKKAHWLNWKKLCASKENGGLGF 330
           PTYTM  F LP ++C E++ LCARFWWG  GD++K HW +WK L   K+ GG+GF
Sbjct: 653 PTYTMGVFLLPVKLCNELDALCARFWWGQSGDERKIHWKSWKFLTKPKKEGGMGF 707

BLAST of Lag0000497 vs. NCBI nr
Match: XP_010682933.1 (PREDICTED: uncharacterized protein LOC104897695 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 363.2 bits (931), Expect = 2.3e-96
Identity = 176/355 (49.58%), Postives = 230/355 (64.79%), Query Frame = 0

Query: 1   MDSFRPISLCNVIYKIISKAIANRMKHFLDTIISPCKSAFIPSRLITDNVLLGFKCIHAR 60
           M  FRPISLC V+YKI+SK +ANR+K FL  +IS  +SAF+P RLITDN +  F+  H+ 
Sbjct: 467 MGDFRPISLCTVLYKILSKMMANRLKVFLSDLISLHQSAFVPGRLITDNAMTAFEIFHSM 526

Query: 61  NSKRSGKEGYIAMKLDMSKAYDRVELAFIRKVMERLDFGDSWIKKVMKCVESVRYSVQIN 120
                GK+G +A KLDMSKAYDRVE +F+ +VM RL F + W++++M+C+ SV YS ++N
Sbjct: 527 KRGGDGKKGVMAFKLDMSKAYDRVEWSFLERVMGRLGFCEGWVRRIMECLSSVSYSFKLN 586

Query: 121 GFPTSKFQPGRGLRQGDPLSPYLFLFCVEGLSAL-------------------------- 180
           G       P RGLRQGDPLSPYLFL C E  SAL                          
Sbjct: 587 GSVEGNIIPSRGLRQGDPLSPYLFLLCAEAFSALLSKAAGDGLIHGARVCRSAPRISHLF 646

Query: 181 FNNDSLILLKANRSNCEVVKKILGEYKMASGQSINFEKSACMISKNIDRAKAKDLSCCLG 240
           F +DS++  +A    C VV  IL  Y+ ASGQ INF+KS    SKN+D ++  D+    G
Sbjct: 647 FADDSILFTRAALQECSVVADILSTYERASGQKINFDKSEVSFSKNVDDSRKNDIRSLFG 706

Query: 241 VKLVDLLGYYLGMPSQTGRRKHKVFWKLKERIWKTLQGWKERLFSMGGKEILIKAVVQAI 300
           V+ V+    YLG+P+  GR K  VF  LKER+WK LQGWKE+L S  GKE+L+KAV+Q+I
Sbjct: 707 VREVERHEKYLGLPTVIGRSKKMVFTVLKERVWKKLQGWKEKLLSRAGKEVLLKAVIQSI 766

Query: 301 PTYTMSCFKLPNRICEEINKLCARFWWGSVGDKKKAHWLNWKKLCASKENGGLGF 330
           PTY MS F +P+ I  EIN +CARFWWGS G +++ HWL+W+K+C  K  GG+GF
Sbjct: 767 PTYMMSLFAIPDCILSEINAMCARFWWGSRGTERRMHWLSWEKMCLPKAYGGMGF 821

BLAST of Lag0000497 vs. NCBI nr
Match: XP_030931246.1 (uncharacterized protein LOC115957168 [Quercus lobata])

HSP 1 Score: 362.8 bits (930), Expect = 3.0e-96
Identity = 176/355 (49.58%), Postives = 233/355 (65.63%), Query Frame = 0

Query: 1   MDSFRPISLCNVIYKIISKAIANRMKHFLDTIISPCKSAFIPSRLITDNVLLGFKCIHAR 60
           M  +RPISLCNVIYKIISK +AN++K  L  IIS  +SAF+PSRLITDN+L+ ++C+HA 
Sbjct: 458 MSDYRPISLCNVIYKIISKVLANKLKQILPQIISSTQSAFVPSRLITDNILVAYECLHAM 517

Query: 61  NSKRSGKEGYIAMKLDMSKAYDRVELAFIRKVMERLDFGDSWIKKVMKCVESVRYSVQIN 120
           + ++ GK+G IA+KLD+SKAYDRVE AF++ +ME++ F   WI +VM CV +  +SV IN
Sbjct: 518 HFRKKGKKGSIALKLDISKAYDRVEWAFLKGIMEKMGFPLIWIDRVMSCVTTPSFSVCIN 577

Query: 121 GFPTSKFQPGRGLRQGDPLSPYLFLFCVEGLSA--------------------------L 180
           G P     P RG+RQGDPLSPYLFL C EG ++                          L
Sbjct: 578 GKPFGNISPSRGIRQGDPLSPYLFLLCAEGFTSLLAKAEMEGQIHGMSICRSAPCISNLL 637

Query: 181 FNNDSLILLKANRSNCEVVKKILGEYKMASGQSINFEKSACMISKNIDRAKAKDLSCCLG 240
           F +DSL+  +ANR   + + +IL  Y  ASGQ IN EKS+   S N +    +++   LG
Sbjct: 638 FADDSLVFCQANRGEVQGLMEILELYASASGQCINLEKSSVYFSSNTEARHREEIKNMLG 697

Query: 241 VKLVDLLGYYLGMPSQTGRRKHKVFWKLKERIWKTLQGWKERLFSMGGKEILIKAVVQAI 300
           V+ V     YLG+P+  GR K++ F  LK+RIWK LQGWK +L S  GKE+LIKAV Q+I
Sbjct: 698 VQEVARFESYLGLPTLIGRSKYQTFSFLKDRIWKKLQGWKGKLLSRAGKEVLIKAVAQSI 757

Query: 301 PTYTMSCFKLPNRICEEINKLCARFWWGSVGDKKKAHWLNWKKLCASKENGGLGF 330
           PTYTM  F LP ++C E+N +CARFWWG VGD++K HW +W  +   K  GG+GF
Sbjct: 758 PTYTMGVFLLPLKLCNELNAMCARFWWGQVGDERKIHWKSWDSMSKPKREGGMGF 812

BLAST of Lag0000497 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.8e-22
Identity = 92/350 (26.29%), Postives = 153/350 (43.71%), Query Frame = 0

Query: 3   SFRPISLCNVIYKIISKAIANRMKHFLDTIISPCKSAFIPSRLITDNVLLGFKCIHARNS 62
           ++RP+SL +  YKI++KAI+ R+K  L  +I P +S  +P R I DNV L    +H   +
Sbjct: 524 NWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQSYTVPGRTIFDNVFLIRDLLHF--A 583

Query: 63  KRSGKEGYIAMKLDMSKAYDRVELAFIRKVMERLDFGDSWIKKVMKCVESVRYSVQINGF 122
           +R+G      + LD  KA+DRV+  ++   ++   FG  ++  +     S    V+IN  
Sbjct: 584 RRTGL-SLAFLSLDQEKAFDRVDHQYLIGTLQAYSFGPQFVGYLKTMYASAECLVKINWS 643

Query: 123 PTSKFQPGRGLRQGDPLSPYLFLFCVEGLSALFNN--------------------DSLIL 182
            T+    GRG+RQG PLS  L+   +E    L                       D +IL
Sbjct: 644 LTAPLAFGRGVRQGCPLSGQLYSLAIEPFLCLLRKRLTGLVLKEPDMRVVLSAYADDVIL 703

Query: 183 LKANRSNCEVVKKILGEYKMASGQSINFEKSACMI--SKNIDRAKAKDLSCCLGVKLVDL 242
           +  +  + E  ++    Y  AS   IN+ KS+ ++  S  +D             K++  
Sbjct: 704 VAQDLVDLERAQECQEVYAAASSARINWSKSSGLLEGSLKVDFLPPAFRDISWESKIIKY 763

Query: 243 LGYYLGMPSQTGRRKHKVFWKLKERIWKTLQGWK--ERLFSMGGKEILIKAVVQAIPTYT 302
           LG YL        +    F +L+E +   L  WK   ++ SM G+ ++I  +V +   Y 
Sbjct: 764 LGVYLSAEEYPVSQN---FIELEECVLTRLGKWKGFAKVLSMRGRALVINQLVASQIWYR 823

Query: 303 MSCFKLPNRICEEINKLCARFWWGSVGDKKKAHWLNWKKLCASKENGGLG 329
           + C         +I +    F W  +G     HW++        + GG G
Sbjct: 824 LICLSPTQEFIAKIQRRLLDFLW--IG----KHWVSAGVSSLPLKEGGQG 861

BLAST of Lag0000497 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 1.5e-21
Identity = 81/329 (24.62%), Postives = 148/329 (44.98%), Query Frame = 0

Query: 1   MDSFRPISLCNVIYKIISKAIANRMKHFLDTIISPCKSAFIPSRLITDNVLLGFKCIHAR 60
           +++FRPISL N+  KI++K +ANR++  +  II P +  FIP      N+      IH  
Sbjct: 534 IENFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQVGFIPGMQGWFNIRKSINVIHYI 593

Query: 61  NSKRSGKEGYIAMKLDMSKAYDRVELAFIRKVMERLDFGDSWIKKVMKCVESVRYSVQIN 120
           N  +   + ++ + LD  KA+D+++  F+ KV+ER      ++  +         ++++N
Sbjct: 594 NKLKD--KNHMIISLDAEKAFDKIQHPFMIKVLERSGIQGPYLNMIKAIYSKPVANIKVN 653

Query: 121 GFPTSKFQPGRGLRQGDPLSPYLFLFCVEGLS---------------------ALFNNDS 180
           G          G RQG PLSPYLF   +E L+                     +L  +D 
Sbjct: 654 GEKLEAIPLKSGTRQGCPLSPYLFNIVLEVLARAIRQQKEIKGIQIGKEEVKISLLADDM 713

Query: 181 LILLKANRSNCEVVKKILGEYKMASGQSINFEKS-ACMISKNIDRAKAKDLSCCLGVKLV 240
           ++ +   +++   +  ++  +    G  IN  KS A + +KN  +   K++       +V
Sbjct: 714 IVYISDPKNSTRELLNLINSFGEVVGYKINSNKSMAFLYTKN--KQAEKEIRETTPFSIV 773

Query: 241 DLLGYYLG--MPSQTGRRKHKVFWKLKERIWKTLQGWKERLFSMGGKEILIKAVV--QAI 300
                YLG  +  +      K F  LK+ I + L+ WK+   S  G+  ++K  +  +AI
Sbjct: 774 TNNIKYLGVTLTKEVKDLYDKNFKSLKKEIKEDLRRWKDLPCSWIGRINIVKMAILPKAI 833

Query: 301 PTYTMSCFKLPNRICEEINKLCARFWWGS 304
             +     K+P +   E+     +F W +
Sbjct: 834 YRFNAIPIKIPTQFFNELEGAICKFVWNN 858

BLAST of Lag0000497 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-19
Identity = 77/326 (23.62%), Postives = 149/326 (45.71%), Query Frame = 0

Query: 2   DSFRPISLCNVIYKIISKAIANRMKHFLDTIISPCKSAFIPSRLITDNVLLGFKCIHARN 61
           +++RPISL N+  KI++K + NR++  +  II   +  FIP      N+      I   N
Sbjct: 527 ENYRPISLMNIDAKILNKILTNRIQQHIKKIIHHDQVGFIPGSQGWFNIRKSINVIQHIN 586

Query: 62  SKRSGKEGYIAMKLDMSKAYDRVELAFIRKVMERLDFGDSWIKKVMKCVESVRYSVQING 121
             ++  + ++ + +D  KA+D ++  F+ + ++++    +++K +         ++ +NG
Sbjct: 587 KLKN--KDHMILSIDAEKAFDNIQHPFMIRTLKKIGIEGTFLKLIEAIYSKPTANIILNG 646

Query: 122 FPTSKFQPGRGLRQGDPLSPYLFLFCVEGLS---------------------ALFNNDSL 181
                F    G RQG PLSP LF   +E L+                     +LF +D +
Sbjct: 647 VKLKSFPLRSGTRQGCPLSPLLFNIVMEVLAIAIREEKAIKGIHIGSEEIKLSLFADDMI 706

Query: 182 ILLKANRSNCEVVKKILGEYKMASGQSINFEKSACMISKNIDRAK--AKD-LSCCLGVKL 241
           + L+  R +   + +++ EY   SG  IN  KS   I  N ++A+   KD +   +  K 
Sbjct: 707 VYLENTRDSTTKLLEVIKEYSNVSGYKINTHKSVAFIYTNNNQAEKTVKDSIPFTVVPKK 766

Query: 242 VDLLGYYLGMPSQTGRRKHKVFWKLKERIWKTLQGWKERLFSMGGKEILIKAVV--QAIP 301
           +  LG YL    +   +++  +  L++ I + +  WK    S  G+  ++K  +  +AI 
Sbjct: 767 MKYLGVYLTKDVKDLYKEN--YETLRKEIAEDVNKWKNIPCSWLGRINIVKMSILPKAIY 826

BLAST of Lag0000497 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-19
Identity = 76/326 (23.31%), Postives = 145/326 (44.48%), Query Frame = 0

Query: 2   DSFRPISLCNVIYKIISKAIANRMKHFLDTIISPCKSAFIPSRLITDNVLLGFKCIHARN 61
           ++FRPISL N+  KI++K +ANR++  +  +I   +  FIP      N+      I   N
Sbjct: 528 ENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHIN 587

Query: 62  SKRSGKEGYIAMKLDMSKAYDRVELAFIRKVMERLDFGDSWIKKVMKCVESVRYSVQING 121
             R+  + ++ + +D  KA+D+++  F+ K + +L     ++K +    +    ++ +NG
Sbjct: 588 --RAKDKNHVIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIYDKPTANIILNG 647

Query: 122 FPTSKFQPGRGLRQGDPLSPYLFLFCVEGLS---------------------ALFNNDSL 181
                F    G RQG PLSP LF   +E L+                     +LF +D +
Sbjct: 648 QKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMI 707

Query: 182 ILLKANRSNCEVVKKILGEYKMASGQSINFEKSACMISKNIDRAKAK---DLSCCLGVKL 241
           + L+    + + + K++  +   SG  IN +KS   +  N  + +++   +L   +  K 
Sbjct: 708 VYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYNNNRQTESQIMGELPFTIASKR 767

Query: 242 VDLLGYYLGMPSQTGRRKHKVFWKLKERIWKTLQGWKERLFSMGGKEILIKAVV--QAIP 301
           +  LG  L    +   +++  +  L + I +    WK    S  G+  ++K  +  + I 
Sbjct: 768 IKYLGIQLTRDVKDLFKEN--YKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIY 827

BLAST of Lag0000497 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.5e-16
Identity = 38/102 (37.25%), Postives = 58/102 (56.86%), Query Frame = 0

Query: 227 MPSQTGRRKHKVFWKLKERIWKTLQGWKERLFSMGGKEILIKAVVQAIPTYTMSCFKLPN 286
           MP    R     F ++ ER+   + GW+E+  S  G+  L KAV+ ++P ++MS   LP 
Sbjct: 1   MPVLQKRINKDTFGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQ 60

Query: 287 RICEEINKLCARFWWGSVGDKKKAHWLNWKKLCASKENGGLG 329
            I   +++L   F WGS  +KKK H + W K+C+ K+ GGLG
Sbjct: 61  SILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLG 102

BLAST of Lag0000497 vs. ExPASy TrEMBL
Match: A0A2N9EK17 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7109 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 1.1e-99
Identity = 179/330 (54.24%), Postives = 229/330 (69.39%), Query Frame = 0

Query: 1   MDSFRPISLCNVIYKIISKAIANRMKHFLDTIISPCKSAFIPSRLITDNVLLGFKCIHAR 60
           +  FRPISLCNV+YKIISK +ANRMK  L  +IS  +SAF+P RLITDN+L+ F+ +H  
Sbjct: 62  LSQFRPISLCNVVYKIISKVLANRMKSILSVVISDYQSAFVPERLITDNILIAFEVMHYL 121

Query: 61  NSKRSGKEGYIAMKLDMSKAYDRVELAFIRKVMERLDFGDSWIKKVMKCVESVRYSVQIN 120
           N+KR GK  ++A KLDMSKAYDRVE  +++ VM ++ F   W+  +M+C+ +V YSV IN
Sbjct: 122 NTKRQGKTAHMAAKLDMSKAYDRVEWNYLQAVMLKMGFESRWVNLIMECLSTVNYSVLIN 181

Query: 121 GFPTSKFQPGRGLRQGDPLSPYLFLFCVEGLSALFN-NDSLILLKANRSNCEVVKKILGE 180
           G P    +P RGLRQGDPLSPYLFL C EGLSALF   +    L A +S+   +K+IL  
Sbjct: 182 GEPHGYIRPSRGLRQGDPLSPYLFLICAEGLSALFRAAERERRLCALQSDSMALKEILHN 241

Query: 181 YKMASGQSINFEKSACMISKNIDRAKAKDLSCCLGVKLVDLLGYYLGMPSQTGRRKHKVF 240
           Y+MASGQ +NFEKSA   SKN  +   +D+S  LG  L    G YLG+P   GR+K + F
Sbjct: 242 YEMASGQQLNFEKSAFFFSKNTPQQIKEDISTILGTSLTSNFGKYLGLPPLIGRKKRQAF 301

Query: 241 WKLKERIWKTLQGWKERLFSMGGKEILIKAVVQAIPTYTMSCFKLPNRICEEINKLCARF 300
            + K RIWK LQGWK +L S  G+E+LIKAV  AIPTY MSCFK+P  +C EI  L +RF
Sbjct: 302 EENKTRIWKRLQGWKGKLLSQAGREVLIKAVAYAIPTYAMSCFKIPETLCSEIQALTSRF 361

Query: 301 WWGSVGDKKKAHWLNWKKLCASKENGGLGF 330
           WWG  GD++K HW+ W+KL   K+ GG+GF
Sbjct: 362 WWGQRGDERKIHWIKWEKLSRHKQLGGIGF 391

BLAST of Lag0000497 vs. ExPASy TrEMBL
Match: A0A2N9I9F4 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50479 PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 9.2e-99
Identity = 177/352 (50.28%), Postives = 234/352 (66.48%), Query Frame = 0

Query: 4    FRPISLCNVIYKIISKAIANRMKHFLDTIISPCKSAFIPSRLITDNVLLGFKCIHARNSK 63
            +RPISLCNVIYK+ISK +ANR+K  L  +IS  +SAF+P RLITDN+L+ F+ +H  +++
Sbjct: 1405 YRPISLCNVIYKLISKVLANRLKKVLPKVISDTQSAFVPGRLITDNILIAFETLHHMHNQ 1464

Query: 64   RSGKEGYIAMKLDMSKAYDRVELAFIRKVMERLDFGDSWIKKVMKCVESVRYSVQINGFP 123
            RSGK G +A+KLDMSKAYDRVE  F+++VM R+ F ++W   +M C+ +V YS+ ING P
Sbjct: 1465 RSGKVGSMALKLDMSKAYDRVEWGFLKQVMTRMGFHETWTSMIMACISTVSYSLLINGEP 1524

Query: 124  TSKFQPGRGLRQGDPLSPYLFLFCVEGLSAL--------------------------FNN 183
            T    P RGLRQGDP+SPYLFL C EGL+ L                          F +
Sbjct: 1525 TGLITPTRGLRQGDPISPYLFLLCAEGLNGLLKKAANQGDIHGVSLCRRGPKITNLFFAD 1584

Query: 184  DSLILLKANRSNCEVVKKILGEYKMASGQSINFEKSACMISKNIDRAKAKDLSCCLGVKL 243
            DSL+  +A R  C+ ++ IL  Y+ ASGQ +N EK+    S+N  +A  ++L   LGV  
Sbjct: 1585 DSLLFCRATREECQKIQHILWLYEKASGQKLNREKTTLFFSRNTPQAMQEELKDILGVPS 1644

Query: 244  VDLLGYYLGMPSQTGRRKHKVFWKLKERIWKTLQGWKERLFSMGGKEILIKAVVQAIPTY 303
            +     YLG+PS  G+ K   F ++KER+W  ++GWKE+L S  G+EILIKAVVQAIPTY
Sbjct: 1645 IQQYEKYLGLPSLVGKEKITCFSQIKERVWSKIKGWKEKLLSQAGREILIKAVVQAIPTY 1704

Query: 304  TMSCFKLPNRICEEINKLCARFWWGSVGDKKKAHWLNWKKLCASKENGGLGF 330
            TM+CFKLP  +C+EI  L  RFWWG  GD++K HWL W+KLC  K  GGLGF
Sbjct: 1705 TMNCFKLPVTLCKEIEGLIRRFWWGQKGDERKIHWLRWEKLCQPKSMGGLGF 1756

BLAST of Lag0000497 vs. ExPASy TrEMBL
Match: A0A2N9ESR2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5496 PE=3 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 2.0e-98
Identity = 177/352 (50.28%), Postives = 233/352 (66.19%), Query Frame = 0

Query: 4    FRPISLCNVIYKIISKAIANRMKHFLDTIISPCKSAFIPSRLITDNVLLGFKCIHARNSK 63
            +RPISLCNVIYK+ISK +ANR+K  L  +IS  +SAF+P RLITDN+L+ F+ +H  +++
Sbjct: 836  YRPISLCNVIYKLISKVLANRLKKVLPKVISDTQSAFVPGRLITDNILIAFETLHHMHNQ 895

Query: 64   RSGKEGYIAMKLDMSKAYDRVELAFIRKVMERLDFGDSWIKKVMKCVESVRYSVQINGFP 123
            RSGK G +A+KLDMSKAYDRVE  F+++VM R+ F ++W   +M C+ +V YS+ ING P
Sbjct: 896  RSGKVGSMALKLDMSKAYDRVEWGFLKQVMTRMGFHETWTSMIMACISTVSYSLLINGEP 955

Query: 124  TSKFQPGRGLRQGDPLSPYLFLFCVEGLSAL--------------------------FNN 183
            T    P RGLRQGDP+SPYLFL C EGL+ L                          F +
Sbjct: 956  TGLITPTRGLRQGDPISPYLFLLCAEGLNGLLKKAANQGDIHGVSLCRRGPKITNLFFAD 1015

Query: 184  DSLILLKANRSNCEVVKKILGEYKMASGQSINFEKSACMISKNIDRAKAKDLSCCLGVKL 243
            DSL+  +A R  C+ ++ IL  Y+ ASGQ +N EK+    S+N  +A  ++L   LGV  
Sbjct: 1016 DSLLFCRATREECQKIQHILWLYEKASGQKLNREKTTLFFSRNTPQAMQEELKDILGVPS 1075

Query: 244  VDLLGYYLGMPSQTGRRKHKVFWKLKERIWKTLQGWKERLFSMGGKEILIKAVVQAIPTY 303
            +     YLG+PS  G+ K   F ++KER+W  ++GWKE+L S  G+EILIKAVVQAIPTY
Sbjct: 1076 IQQYEKYLGLPSLVGKEKITCFSQIKERVWSKIKGWKEKLLSQAGREILIKAVVQAIPTY 1135

Query: 304  TMSCFKLPNRICEEINKLCARFWWGSVGDKKKAHWLNWKKLCASKENGGLGF 330
            TM+CFKLP  +C+EI  L  RFWWG  GD+ K HWL W+KLC  K  GGLGF
Sbjct: 1136 TMNCFKLPVTLCKEIEGLIRRFWWGQKGDEHKIHWLRWEKLCQPKSMGGLGF 1187

BLAST of Lag0000497 vs. ExPASy TrEMBL
Match: A0A2N9EVW3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10818 PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 4.6e-98
Identity = 172/352 (48.86%), Postives = 235/352 (66.76%), Query Frame = 0

Query: 4    FRPISLCNVIYKIISKAIANRMKHFLDTIISPCKSAFIPSRLITDNVLLGFKCIHARNSK 63
            +RPISLCNV+YK+ISK +ANR+K  L  IIS  +SAF+P RLITDN+L+ F+ +H  ++K
Sbjct: 756  YRPISLCNVLYKLISKVLANRLKKILPHIISESQSAFVPGRLITDNILIAFETLHHMHNK 815

Query: 64   RSGKEGYIAMKLDMSKAYDRVELAFIRKVMERLDFGDSWIKKVMKCVESVRYSVQINGFP 123
            R+GK G +A+KLDMSKAYDRVE  F+ KVM+R+ F + WI  +++C+ SV YS+ ING P
Sbjct: 816  RAGKVGSMALKLDMSKAYDRVEWGFVEKVMDRMGFHEKWISLILECISSVSYSLLINGTP 875

Query: 124  TSKFQPGRGLRQGDPLSPYLFLFCVEGLSAL--------------------------FNN 183
            T    P RGLRQGDP+SPYLFL C EGL+ L                          F +
Sbjct: 876  TGHIIPTRGLRQGDPISPYLFLLCAEGLNGLIKKATTQGEIHGVSLCPRGPKITNLFFAD 935

Query: 184  DSLILLKANRSNCEVVKKILGEYKMASGQSINFEKSACMISKNIDRAKAKDLSCCLGVKL 243
            DSL+  +A+   C+ +++IL  Y+ ASGQ +N  K+    S+N  +A  +D+   LGV  
Sbjct: 936  DSLLFCRASLLECQKIQEILATYEKASGQQLNRAKTTLFFSRNTTQAIQEDIKEILGVPS 995

Query: 244  VDLLGYYLGMPSQTGRRKHKVFWKLKERIWKTLQGWKERLFSMGGKEILIKAVVQAIPTY 303
            +     YLG+PS  G+ K   F ++KER+W  ++GWKE+L S  G+E+LIKAV+QAIPTY
Sbjct: 996  IQQYEKYLGLPSLVGKEKMTCFSQIKERVWSKVKGWKEKLLSQAGREVLIKAVIQAIPTY 1055

Query: 304  TMSCFKLPNRICEEINKLCARFWWGSVGDKKKAHWLNWKKLCASKENGGLGF 330
            TM+CFKLP  +C+EI  +  RFWWG   D++K HW+ W+K+C SK  GGLGF
Sbjct: 1056 TMNCFKLPVTLCKEIEGIIRRFWWGHTSDRRKIHWIRWEKMCNSKGEGGLGF 1107

BLAST of Lag0000497 vs. ExPASy TrEMBL
Match: A0A2N9HYS7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44751 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 8.6e-97
Identity = 175/329 (53.19%), Postives = 228/329 (69.30%), Query Frame = 0

Query: 4    FRPISLCNVIYKIISKAIANRMKHFLDTIISPCKSAFIPSRLITDNVLLGFKCIHARNSK 63
            +RPISLCNVIYK+ISK +ANR+K  L  +IS  +SAF+P RLITDN+L+ F+ +H  +++
Sbjct: 910  YRPISLCNVIYKLISKVLANRLKKILPHVISESQSAFVPGRLITDNILIAFETLHHMHNR 969

Query: 64   RSGKEGYIAMKLDMSKAYDRVELAFIRKVMERLDFGDSWIKKVMKCVESVRYSVQINGFP 123
            R GK G +A+KLDMSKAYDRVE  F+++VM R+ F D WI  +M+C+ +V YS+ ING P
Sbjct: 970  RVGKVGSMALKLDMSKAYDRVEWGFLKQVMVRMGFHDRWISLIMECISTVTYSILINGNP 1029

Query: 124  TSKFQPGRGLRQGDPLSPYLFLFCVEGLSALFNNDSL---ILLKANRSNCEVVKKILGEY 183
            T    P RGLRQGDP+SPYLFL C EGL+ L    S    + L A RS     ++    Y
Sbjct: 1030 TGHITPTRGLRQGDPISPYLFLLCAEGLNGLIRKASFQGPLSLNAKRS-----RRFSQLY 1089

Query: 184  KMASGQSINFEKSACMISKNIDRAKAKDLSCCLGVKLVDLLGYYLGMPSQTGRRKHKVFW 243
            + ASGQ +N  K+    SKN  +AK +++   LGV  +     YLG+PS  G+ K   F 
Sbjct: 1090 EKASGQQLNRAKTTLFFSKNTTQAKQEEIKEILGVPSIQQYEKYLGLPSLIGKEKITCFS 1149

Query: 244  KLKERIWKTLQGWKERLFSMGGKEILIKAVVQAIPTYTMSCFKLPNRICEEINKLCARFW 303
            ++KER+W  ++GWKE+L S  G+EILIKAVVQAIPTYTM+CFKLP  +C+EI  +  RFW
Sbjct: 1150 QIKERVWSKVKGWKEKLLSQAGREILIKAVVQAIPTYTMNCFKLPVTLCKEIEGIIRRFW 1209

Query: 304  WGSVGDKKKAHWLNWKKLCASKENGGLGF 330
            WG  GDK+K HWL W+KLC SK  GGLGF
Sbjct: 1210 WGQNGDKRKIHWLKWEKLCQSKGAGGLGF 1233

BLAST of Lag0000497 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-12
Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 0

Query: 273 AIPTYTMSCFKLPNRICEEINKLCARFWWGSVGDKKKAHWLNWKKLCASKE-NGGLGF 330
           A+P Y MSCF+L   +C+++      FWW S  +K+K  W+ W+KLC SKE +GGLGF
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGF 59

BLAST of Lag0000497 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 3.2e-11
Identity = 26/57 (45.61%), Postives = 35/57 (61.40%), Query Frame = 0

Query: 273 AIPTYTMSCFKLPNRICEEINKLCARFWWGSVGDKKKAHWLNWKKLCASKENGGLGF 330
           A+PTYTM+CF LP  +C++I  + A FWW +  + K  HW  W  L   K  GG+GF
Sbjct: 2   ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGF 58

BLAST of Lag0000497 vs. TAIR 10
Match: AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )

HSP 1 Score: 65.5 bits (158), Expect = 9.3e-11
Identity = 46/207 (22.22%), Postives = 93/207 (44.93%), Query Frame = 0

Query: 21  IANRMKHFLDTIISPCKSAFIPSRLITDNVLLGFKCIHARNSKRSGKEGYIAMKLDMSKA 80
           +  R+K  +  +I P +++FIP R+ TDN++   + +H+   K+ G +G++ +KLD+ KA
Sbjct: 1   MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKK-GVKGWMLLKLDLEKA 60

Query: 81  YDRVELAFIRKVMERLDFGDSWIKKVMKCVESVRYSVQINGFPTSKFQP-----GRGLRQ 140
           YDR+   ++   +    F + W+ ++ +     R      G   +  +P       G R 
Sbjct: 61  YDRIRWDYLEDTLISAGFPEVWLPEIARSTFGARRVAPEVGRADASKRPRVSDHRWGFRY 120

Query: 141 GDPLSPYL--FLFCVEGLSALFNNDSL----ILLKANRSNCEVVKKILGEYKMASGQSIN 200
            D  +P+    + C E L  +     +    + LK  +      +K +    +A    + 
Sbjct: 121 DDMAAPFTSNSVACAELLREIGRGSGIPSMPLDLKEEKVFAGAARKSI--EAIAEWDRLT 180

Query: 201 FEKSACMISKNIDRAKAKDLSCCLGVK 217
           +    C+ S +++   AKD    L V+
Sbjct: 181 YLYERCVRSLSVEATNAKDAHEALAVE 204

BLAST of Lag0000497 vs. TAIR 10
Match: ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )

HSP 1 Score: 53.9 bits (128), Expect = 2.8e-07
Identity = 24/36 (66.67%), Postives = 25/36 (69.44%), Query Frame = 0

Query: 119 INGFPTSKFQPGRGLRQGDPLSPYLFLFCVEGLSAL 155
           ING P     P RGLRQGDPLSPYLF+ C E LS L
Sbjct: 14  INGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGL 49

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_030923330.15.0e-9950.70uncharacterized protein LOC115950239 [Quercus lobata][more]
XP_030923826.12.5e-9849.30uncharacterized protein LOC115950728 [Quercus lobata][more]
XP_023913142.11.8e-9650.42uncharacterized protein LOC112024740 [Quercus suber][more]
XP_010682933.12.3e-9649.58PREDICTED: uncharacterized protein LOC104897695 [Beta vulgaris subsp. vulgaris][more]
XP_030931246.13.0e-9649.58uncharacterized protein LOC115957168 [Quercus lobata][more]
Match NameE-valueIdentityDescription
P143811.8e-2226.29Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... [more]
P113691.5e-2124.62LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... [more]
P085481.4e-1923.62LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1[more]
O003701.4e-1923.31LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1[more]
P0C2F65.5e-1637.25Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
Match NameE-valueIdentityDescription
A0A2N9EK171.1e-9954.24Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9I9F49.2e-9950.28Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9ESR22.0e-9850.28Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5496 PE=3 SV=1[more]
A0A2N9EVW34.6e-9848.86Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10818 PE=3 SV=1[more]
A0A2N9HYS78.6e-9753.19Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS44751 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
ATMG00310.11.3e-1248.28RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT4G29090.13.2e-1145.61Ribonuclease H-like superfamily protein [more]
AT4G20520.19.3e-1122.22RNA binding;RNA-directed DNA polymerases [more]
ATMG01250.12.8e-0766.67RNA-directed DNA polymerase (reverse transcriptase) [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 2..223
e-value: 9.1E-31
score: 107.1
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 61..329
NoneNo IPR availablePANTHERPTHR33116:SF45SUBFAMILY NOT NAMEDcoord: 61..329
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 1..228
e-value: 4.09039E-40
score: 138.578
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 4..300

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0000497.1Lag0000497.1mRNA