Lag0000486 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATAACAAATCCGCTCTATCAGGCTTTCATGATAATTGGATCTCACTGATTGTGGATTGTATATCTACTTTTTCCTTCTCTATTGTCATGAATGGTGAGTCTATTGGACATATTTCTCCGTCTCGAGGACTCCGACAAGGTGACCCTTTATCTCCATATCTATTCCTCCTTTGTTCTGAGGGGTTTTCATCATTGCTTTCAACTACAGTCAATTCTCGTTTGCTATCAGGCTTATCTTTATCCAGACATTCCGCAAAAGTGTCTCATTTACTTTTTATTGATGATAGCCCGGTGTTTCTGAAATCTAATGCGTATGAGTCCGGTTTGTTTAAGTCGCTTGTACTAGATTATGAACGGGCGTCGGGACAATGTATAAATTTCAGTAAGTAAATGGTTTGTTTCTCGCCCAATGTAAAACTGGATTTGATATGTCATTTGTCGAATATCTTAAATGTAAAGGTGGTGGCAGACTTGGGATTACCATCTACGTTCTCTAGAGACAAATGTGAAGATTTTCAATTTTTGTTGGATAGAGTTTGGATACAGTTACAAGGTTGGAAAGGTAAACTTTTTTTTTTTTTGGAGGGAAGGAAATATTGCTTAAGAGTTTCATTTAGGCCATTCGTAGTAATGCAATGAGTTGCTTCCGGTTGCCGAAAAGTTTGCTTATCCAATTTTCCTCTTTATGTGCTAAATTTTGGTGGGGTGATTCAAAAGGTCTAGGAAAATTCACTGGATACGGTGGGATAAGATGTGTATGTCGAAGGAGGTTGGAGGTTTGAGTTTTAGAGATTTGGAGGGCTTTAATCAAGCATTACTAGCAAAATGGGTTTGGTGAGTCTTCAAAAATCCAAATCTAACGGTTTCGAAAGTGCTAAAGGGTAAATAGTTCCCTACAACCTCTATTCTTGAAGCATCAATGATGCCTAATTCGTCCTACTTTTGGAAAGGTTTTGTTTGGGGTTTGGAGTTACTACACAAGGGGTTAAGGAAGAATTTAGGAAATGGTAAGGAAATCAGGATGTTCAAAGATCCAAGGCTTCCACTGTCGTCAACGTTTAAGGTTGTTTCTTCGAATGCAGGTATGGATGAAATGAAAGTTAATGAGTTTTTAACGCCATCTCTCTAATGGTATGTGAGGAAATTTTCGGCACATCTGTTATAGAATGATGTAGACTTTATAAAGAATTTTCCCATGAGTAACTTTACTCCTGATATTTGGGTTTGGCATTCCGGTCGTTTTGGAAAGTATTTTGTGAGGAGTGGATACAAGGTGTTTATGCTTTCTAAAGTCGAAGGGGCACCCTCTAGTTTGGTAAGGATGAATGGGTGGTGGAAAAAGATATGGACTCTAAAAGTCCCGTAGAAGATAAAGCATTTTGTTTGGAAGTCTTTCAATAATTGTATCCCCACTTTGGTCAATCTGAGGAATCAGTATATAGAGGTGGATGGCGTTTGCCCAGTCTGTAGTAGGTAGTACGAGACTACTGATCATGTTTTATTTAGAGGAAATTTGGAGAAATCTTCATCCCCATATTCAAATGGAGGATCATGGTTTTCCAAACATCCAGGACAGATGGCTTGCGATACATAATAGATACCATGGGGATTTATTTGAATTGATTTGTGTTGTTGCTTGGTCAATATGAAATGATCAAAATAATTCTATCAATAAGAATCCAATTCCTGGGATTTTCGAAAGGTGCTCTTGGATTAGTAAGTATTTTGAGAGTTTTCAAAAGGCTAATGGGTTGCTAAAGGAATCTAGCCCAACGAAGTTGGTTGCTCCTTTTATTCAAGATAGGAATGGAGTTGTTATCCACGTTGATGTCCCTTGTAATCATCACCATAATATTACTGGATTTTGGGCGATTATTCGAGATGGAGGGGGCTCGGTGTTGGCTGTTATGGTGGCTGTTCATTCTGGTTTGCTTTCGATAAGTGCAGAAACTAGAGCTATAAAGGAAGCTCTTAGTTTGGCTCGAAGGATGGATTTCGAACATATTACATTGTTCTCTGATTCGCTTAATGTTATTAATATTTTGAATGAGGATTTAGATTGTTTGTGTAATGCCTCACGTTTTGGAATCGACCCATTTTGGGATCTGTCGAGCGTTCTTATTCTAATTTGA ATGTATAACAAATCCGCTCTATCAGGCTTTCATGATAATTGGATCTCACTGATTGTGGATTGTATATCTACTTTTTCCTTCTCTATTGTCATGAATGGTGAGTCTATTGGACATATTTCTCCGTCTCGAGGACTCCGACAAGGTGACCCTTTATCTCCATATCTATTCCTCCTTTGTTCTGAGGGGTTTTCATCATTGCTTTCAACTACAGTCAATTCTCGTTTGCTATCAGGCTTATCTTTATCCAGACATTCCGCAAAAGTGTCTCATTTACTTTTTATTGATGATAGCCCGGTGTTTCTGAAATCTAATGCGTATGAGTCCGGTTTGTTTAAGTCGCTTGTACTAGATTATGAACGGGCGTCGGGACAATGTATAAATTTCAGTTTTGTTTGGGGTTTGGAGTTACTACACAAGGGGTTAAGGAAGAATTTAGGAAATGGTAAGGAAATCAGGATGTTCAAAGATCCAAGGCTTCCACTGTCGTCAACGTTTAAGGTTGTTTCTTCGAATGCAGACTTTATAAAGAATTTTCCCATGAGTAACTTTACTCCTGATATTTGGGTTTGGCATTCCGGTCGTTTTGGAAAGTATTTTGTGAGGAGTGGATACAAGGTGTTTATGCTTTCTAAAGTCGAAGGGGCACCCTCTAGTTTGGCTAATGGGTTGCTAAAGGAATCTAGCCCAACGAAGTTGGTTGCTCCTTTTATTCAAGATAGGAATGGAGTTGTTATCCACGTTGATGTCCCTTGTAATCATCACCATAATATTACTGGATTTTGGGCGATTATTCGAGATGGAGGGGGCTCGGTGTTGGCTGTTATGGTGGCTGTTCATTCTGGTTTGCTTTCGATAAGTGCAGAAACTAGAGCTATAAAGGAAGCTCTTAGTTTGGCTCGAAGGATGGATTTCGAACATATTACATTGTTCTCTGATTCGCTTAATGTTATTAATATTTTGAATGAGGATTTAGATTGTTTGTGTAATGCCTCACGTTTTGGAATCGACCCATTTTGGGATCTGTCGAGCGTTCTTATTCTAATTTGA ATGTATAACAAATCCGCTCTATCAGGCTTTCATGATAATTGGATCTCACTGATTGTGGATTGTATATCTACTTTTTCCTTCTCTATTGTCATGAATGGTGAGTCTATTGGACATATTTCTCCGTCTCGAGGACTCCGACAAGGTGACCCTTTATCTCCATATCTATTCCTCCTTTGTTCTGAGGGGTTTTCATCATTGCTTTCAACTACAGTCAATTCTCGTTTGCTATCAGGCTTATCTTTATCCAGACATTCCGCAAAAGTGTCTCATTTACTTTTTATTGATGATAGCCCGGTGTTTCTGAAATCTAATGCGTATGAGTCCGGTTTGTTTAAGTCGCTTGTACTAGATTATGAACGGGCGTCGGGACAATGTATAAATTTCAGTTTTGTTTGGGGTTTGGAGTTACTACACAAGGGGTTAAGGAAGAATTTAGGAAATGGTAAGGAAATCAGGATGTTCAAAGATCCAAGGCTTCCACTGTCGTCAACGTTTAAGGTTGTTTCTTCGAATGCAGACTTTATAAAGAATTTTCCCATGAGTAACTTTACTCCTGATATTTGGGTTTGGCATTCCGGTCGTTTTGGAAAGTATTTTGTGAGGAGTGGATACAAGGTGTTTATGCTTTCTAAAGTCGAAGGGGCACCCTCTAGTTTGGCTAATGGGTTGCTAAAGGAATCTAGCCCAACGAAGTTGGTTGCTCCTTTTATTCAAGATAGGAATGGAGTTGTTATCCACGTTGATGTCCCTTGTAATCATCACCATAATATTACTGGATTTTGGGCGATTATTCGAGATGGAGGGGGCTCGGTGTTGGCTGTTATGGTGGCTGTTCATTCTGGTTTGCTTTCGATAAGTGCAGAAACTAGAGCTATAAAGGAAGCTCTTAGTTTGGCTCGAAGGATGGATTTCGAACATATTACATTGTTCTCTGATTCGCTTAATGTTATTAATATTTTGAATGAGGATTTAGATTGTTTGTGTAATGCCTCACGTTTTGGAATCGACCCATTTTGGGATCTGTCGAGCGTTCTTATTCTAATTTGA MYNKSALSGFHDNWISLIVDCISTFSFSIVMNGESIGHISPSRGLRQGDPLSPYLFLLCSEGFSSLLSTTVNSRLLSGLSLSRHSAKVSHLLFIDDSPVFLKSNAYESGLFKSLVLDYERASGQCINFSFVWGLELLHKGLRKNLGNGKEIRMFKDPRLPLSSTFKVVSSNADFIKNFPMSNFTPDIWVWHSGRFGKYFVRSGYKVFMLSKVEGAPSSLANGLLKESSPTKLVAPFIQDRNGVVIHVDVPCNHHHNITGFWAIIRDGGGSVLAVMVAVHSGLLSISAETRAIKEALSLARRMDFEHITLFSDSLNVINILNEDLDCLCNASRFGIDPFWDLSSVLILI Homology
BLAST of Lag0000486 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 147.1 bits (370), Expect = 2.8e-31 Identity = 110/386 (28.50%), Postives = 147/386 (38.08%), Query Frame = 0
BLAST of Lag0000486 vs. NCBI nr
Match: XP_030970961.1 (uncharacterized protein LOC115991405 [Quercus lobata]) HSP 1 Score: 142.5 bits (358), Expect = 6.8e-30 Identity = 67/119 (56.30%), Postives = 91/119 (76.47%), Query Frame = 0
BLAST of Lag0000486 vs. NCBI nr
Match: XP_030958760.1 (uncharacterized protein LOC115980671 [Quercus lobata]) HSP 1 Score: 141.4 bits (355), Expect = 1.5e-29 Identity = 66/119 (55.46%), Postives = 90/119 (75.63%), Query Frame = 0
BLAST of Lag0000486 vs. NCBI nr
Match: XP_030478262.1 (uncharacterized protein LOC115695328 [Cannabis sativa]) HSP 1 Score: 137.5 bits (345), Expect = 2.2e-28 Identity = 62/119 (52.10%), Postives = 86/119 (72.27%), Query Frame = 0
BLAST of Lag0000486 vs. NCBI nr
Match: XP_023880426.1 (uncharacterized protein LOC111992797 [Quercus suber]) HSP 1 Score: 135.6 bits (340), Expect = 8.3e-28 Identity = 63/119 (52.94%), Postives = 90/119 (75.63%), Query Frame = 0
BLAST of Lag0000486 vs. ExPASy Swiss-Prot
Match: P92555 (Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 GN=AtMg01250 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 3.9e-12 Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 0
BLAST of Lag0000486 vs. ExPASy TrEMBL
Match: A0A803P5H2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 2.0e-35 Identity = 95/232 (40.95%), Postives = 122/232 (52.59%), Query Frame = 0
BLAST of Lag0000486 vs. ExPASy TrEMBL
Match: A0A803NML1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 3.8e-34 Identity = 89/191 (46.60%), Postives = 113/191 (59.16%), Query Frame = 0
BLAST of Lag0000486 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.3e-31 Identity = 110/386 (28.50%), Postives = 147/386 (38.08%), Query Frame = 0
BLAST of Lag0000486 vs. ExPASy TrEMBL
Match: A0A2N9F9Z6 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11476 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 4.3e-30 Identity = 86/259 (33.20%), Postives = 130/259 (50.19%), Query Frame = 0
BLAST of Lag0000486 vs. ExPASy TrEMBL
Match: A0A2N9FR55 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17283 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 2.8e-29 Identity = 89/294 (30.27%), Postives = 142/294 (48.30%), Query Frame = 0
BLAST of Lag0000486 vs. TAIR 10
Match: ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) ) HSP 1 Score: 73.9 bits (180), Expect = 2.8e-13 Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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