Lag0000450 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0000450
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	COBRA-like protein
Location	chr4: 7562297 .. 7563125 (+)
RNA-Seq Expression	Lag0000450
Synteny	Lag0000450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACCATTGTTTCTTGCCCAAAATGCTCTTGTGGCTGCCAAGCAATTTGAACGGACCCGAAATTGTGTGGAGTAAGCTCACTCCTCATATAAGGCTATAAACTAACATGCCTCGGACTAATGCCAACAAGCTTATTTGCAGGGCAAATTCTCCATATTTAGCCTCTGTTACCGATTCTAGTTCAGCAAGAACAATTTGGCTCCTCTGGTTCAGTGTACGGGCCATATGTGCCCGATCCGAGTTCACTGGCATGTGAAGATTAACTATAAGGAGTATTGGCGTGTGAAGATCACAATTACAAACTTCAATTACAGGATGAACTATTCAAATTGGAACTTAGTTGTCCAGCATCCCAACTTCGACAATCTAACGCAGATTTTCAGCTTCAACTATAAGTCAATCAATCCATATGGAACGATAAGTAGGATACATTCTCTTTTAGTCCCTTATGATGGAAACATCTCGCTTCCATTATTGTTCCTATTCTTTAAATTTAAATCGATGTATAATAAAATGTGTATTTGTAACAGATGATACTGCAATCCTGTGGGGAGTCAAGTTCTACAATGATTTGCTCATGCAAGCAGGCCCTCTTGGGAATGTGCAGACAGAGTTACTTTTCAGGAAGGACCAATCGACTTTACGTTTGATAAAGGCTGGGCTTTCCCTCGAAGGATCTATTTCAATGGCGACAATTGTGTCATGCCACCTCCAGATGCCTATCCCTACTTACCAAACGCTGGTTCTAAGCAAGGTGTTTCGTTGTTACTATATGCTATTGCTGATTTCCATGACTCTCTTGTCCTTTCGCCATTCATTTGCGTAA

mRNA sequence

ATGACACCATTGTTTCTTGCCCAAAATGCTCTTGTGGCTGCCAAGCAATTTGAACGGACCCGAAATTGTGTGGACAAGAACAATTTGGCTCCTCTGGTTCAGTGTACGGGCCATATGTGCCCGATCCGAGTTCACTGGCATGTGAAGATTAACTATAAGGAGTATTGGCGTGTGAAGATCACAATTACAAACTTCAATTACAGGATGAACTATTCAAATTGGAACTTAGTTGTCCAGCATCCCAACTTCGACAATCTAACGCAGATTTTCAGCTTCAACTATAAGTCAATCAATCCATATGGAACGATAAATGATACTGCAATCCTGTGGGGAGTCAAGTTCTACAATGATTTGCTCATGCAAGCAGGCCCTCTTGGGAATGTGCAGACAGAGTTACTTTTCAGGAAGGACCAATCGACTTTACGTTTGATAAAGGCTGGGCTTTCCCTCGAAGGATCTATTTCAATGGCGACAATTGTGTCATGCCACCTCCAGATGCCTATCCCTACTTACCAAACGCTGGTTCTAAGCAAGGTGTTTCGTTGTTACTATATGCTATTGCTGATTTCCATGACTCTCTTGTCCTTTCGCCATTCATTTGCGTAA

Coding sequence (CDS)

ATGACACCATTGTTTCTTGCCCAAAATGCTCTTGTGGCTGCCAAGCAATTTGAACGGACCCGAAATTGTGTGGACAAGAACAATTTGGCTCCTCTGGTTCAGTGTACGGGCCATATGTGCCCGATCCGAGTTCACTGGCATGTGAAGATTAACTATAAGGAGTATTGGCGTGTGAAGATCACAATTACAAACTTCAATTACAGGATGAACTATTCAAATTGGAACTTAGTTGTCCAGCATCCCAACTTCGACAATCTAACGCAGATTTTCAGCTTCAACTATAAGTCAATCAATCCATATGGAACGATAAATGATACTGCAATCCTGTGGGGAGTCAAGTTCTACAATGATTTGCTCATGCAAGCAGGCCCTCTTGGGAATGTGCAGACAGAGTTACTTTTCAGGAAGGACCAATCGACTTTACGTTTGATAAAGGCTGGGCTTTCCCTCGAAGGATCTATTTCAATGGCGACAATTGTGTCATGCCACCTCCAGATGCCTATCCCTACTTACCAAACGCTGGTTCTAAGCAAGGTGTTTCGTTGTTACTATATGCTATTGCTGATTTCCATGACTCTCTTGTCCTTTCGCCATTCATTTGCGTAA

Protein sequence

MTPLFLAQNALVAAKQFERTRNCVDKNNLAPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYRMNYSNWNLVVQHPNFDNLTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTLRLIKAGLSLEGSISMATIVSCHLQMPIPTYQTLVLSKVFRCYYMLLLISMTLLSFRHSFA

Homology

[Close]

BLAST of Lag0000450 vs. NCBI nr
Match: XP_004137135.1 (COBRA-like protein 1 [Cucumis sativus] >KGN53788.1 hypothetical protein Csa_014552 [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 1.3e-62
Identity = 132/180 (73.33%), Postives = 141/180 (78.33%), Query Frame = 0


Query: 26  KNNLAPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYRMNYSNWNLVVQHPNFDN 85
           KNNL PLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNY MNY+NWNLVVQHPNFDN
Sbjct: 280 KNNLTPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYVMNYTNWNLVVQHPNFDN 339

Query: 86  LTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTLRLIK 145
           LTQIFSFNY+SINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQS     K
Sbjct: 340 LTQIFSFNYQSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSDFTFDK 399

Query: 146 AGLSLEGSISMATIVSCHLQMPIPTYQTLVLSKVFR----CYYMLLLISMTLLSFRHSFA 202
            G +    I        +  MP P     + +K  +     + MLLLIS+TLLSF HSFA
Sbjct: 400 -GWAFPRRIYFN---GDNCVMPPPEAYPFLPNKGSKQGVSVFTMLLLISLTLLSFHHSFA 455

[Close]

BLAST of Lag0000450 vs. NCBI nr
Match: XP_038905211.1 (protein COBRA-like [Benincasa hispida])

HSP 1 Score: 249.6 bits (636), Expect = 2.3e-62
Identity = 131/178 (73.60%), Postives = 139/178 (78.09%), Query Frame = 0


Query: 26  KNNLAPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYRMNYSNWNLVVQHPNFDN 85
           KNNL PLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNY MNY+NWNLVVQHPNFDN
Sbjct: 280 KNNLTPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYMMNYTNWNLVVQHPNFDN 339

Query: 86  LTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTLRLIK 145
           LTQIFSFNY+SINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQST    K
Sbjct: 340 LTQIFSFNYQSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTFTFDK 399

Query: 146 AGLSLEGSISMATIVSCHLQMP--IPTYQTLVLSKVFRCYYMLLLISMTLLSFRHSFA 202
            G +    I      +C +  P   P        +    + MLLL S+TLLSF HSFA
Sbjct: 400 -GWAFPRRIYF-NGDNCVMPPPEAYPYLPNTGSKQGVSVFTMLLLTSLTLLSFHHSFA 455

[Close]

BLAST of Lag0000450 vs. NCBI nr
Match: KAA0045480.1 (COBRA-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 248.8 bits (634), Expect = 3.9e-62
Identity = 131/180 (72.78%), Postives = 140/180 (77.78%), Query Frame = 0


Query: 26  KNNLAPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYRMNYSNWNLVVQHPNFDN 85
           KNNL PLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNY MNY+NWNLVVQHPNFDN
Sbjct: 252 KNNLTPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYMMNYTNWNLVVQHPNFDN 311

Query: 86  LTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTLRLIK 145
           LTQIFSFNY+SINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQS     K
Sbjct: 312 LTQIFSFNYQSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSDFTFDK 371

Query: 146 AGLSLEGSISMATIVSCHLQMPIPTYQTLVLSKVFR----CYYMLLLISMTLLSFRHSFA 202
            G +    I        +  MP P     + +K  +     + MLLLIS+ LLSF HSFA
Sbjct: 372 -GWAFPRRIYFN---GDNCVMPPPEAYPYLPNKGSKRGVSVFTMLLLISLALLSFHHSFA 427

[Close]

BLAST of Lag0000450 vs. NCBI nr
Match: XP_008464583.1 (PREDICTED: COBRA-like protein 1 [Cucumis melo])

HSP 1 Score: 246.5 bits (628), Expect = 1.9e-61
Identity = 130/180 (72.22%), Postives = 139/180 (77.22%), Query Frame = 0


Query: 26  KNNLAPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYRMNYSNWNLVVQHPNFDN 85
           KNNL PLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNY MNY+NWNLVVQHPNFDN
Sbjct: 280 KNNLTPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYMMNYTNWNLVVQHPNFDN 339

Query: 86  LTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTLRLIK 145
           LTQIFSFNY+SINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQS     K
Sbjct: 340 LTQIFSFNYQSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSDFTFDK 399

Query: 146 AGLSLEGSISMATIVSCHLQMPIPTYQTLVLSKVFR----CYYMLLLISMTLLSFRHSFA 202
            G +    I        +  MP P     + +K  +     + M LLIS+ LLSF HSFA
Sbjct: 400 -GWAFPRRIYFN---GDNCVMPPPEAYPYLPNKGSKRGVSVFTMRLLISLALLSFHHSFA 455

[Close]

BLAST of Lag0000450 vs. NCBI nr
Match: XP_023526993.1 (protein COBRA-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 244.2 bits (622), Expect = 9.6e-61
Identity = 129/177 (72.88%), Postives = 137/177 (77.40%), Query Frame = 0


Query: 26  KNNLAPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYRMNYSNWNLVVQHPNFDN 85
           KNN+APLVQCT HMCPIRVHWHVKINYKEYWRVKITITNFNY MNY+NWNLVVQHPNFDN
Sbjct: 280 KNNVAPLVQCTSHMCPIRVHWHVKINYKEYWRVKITITNFNYVMNYTNWNLVVQHPNFDN 339

Query: 86  LTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTLRLIK 145
           LTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLF+KDQST    K
Sbjct: 340 LTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFQKDQSTFTFDK 399

Query: 146 AGLSLEGSISMATIVSCHLQMP--IPTYQTLVLSKVFRCYYMLLLISMTLLSFRHSF 201
            G +    I      +C +  P   P             + MLLLIS+TLLSF H F
Sbjct: 400 -GWAFPRRIYF-NGDNCVMPPPEAYPYLPNTGSKHGVSMFTMLLLISLTLLSFHHLF 454

[Close]

BLAST of Lag0000450 vs. ExPASy Swiss-Prot
Match: Q6Z4G8 (COBRA-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L6 PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.8e-55
Identity = 95/124 (76.61%), Postives = 108/124 (87.10%), Query Frame = 0


Query: 22  NCVDKNNLAPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYRMNYSNWNLVVQHP 81
           N  +K++L PLVQCT HMCPIRVHWHVK+NYKEYWRVKIT+TNFNYRMNYS WNLV QHP
Sbjct: 268 NTHNKDSLTPLVQCTSHMCPIRVHWHVKVNYKEYWRVKITVTNFNYRMNYSQWNLVTQHP 327

Query: 82  NFDNLTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTL 141
           +FDNLT IFSFNYKS+NPYG INDTA+LWG+K+YNDLLM AGP GNVQ+ELLF+KD  + 
Sbjct: 328 SFDNLTTIFSFNYKSLNPYGVINDTAMLWGIKYYNDLLMTAGPDGNVQSELLFKKDPKSF 387

Query: 142 RLIK 146
              K
Sbjct: 388 TFEK 391

[Close]

BLAST of Lag0000450 vs. ExPASy Swiss-Prot
Match: Q75IW1 (COBRA-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L2 PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 4.1e-54
Identity = 92/120 (76.67%), Postives = 108/120 (90.00%), Query Frame = 0


Query: 26  KNNLAPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYRMNYSNWNLVVQHPNFDN 85
           K +L PLVQCT HMCPIRVHWHVK+NY++YWRVK+TITN+NYRMNYS WNLVVQHPNF+N
Sbjct: 274 KGSLTPLVQCTPHMCPIRVHWHVKLNYRDYWRVKVTITNWNYRMNYSQWNLVVQHPNFEN 333

Query: 86  LTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTLRLIK 145
           ++ +FSFNYKS+NPYG INDTA++WGVK+YNDLLM AGP GNVQ+ELLFRKD+ST    K
Sbjct: 334 VSTVFSFNYKSLNPYGVINDTAMMWGVKYYNDLLMVAGPDGNVQSELLFRKDRSTFTFDK 393

[Close]

BLAST of Lag0000450 vs. ExPASy Swiss-Prot
Match: Q94KT8 (Protein COBRA OS=Arabidopsis thaliana OX=3702 GN=COB PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.6e-53
Identity = 93/117 (79.49%), Postives = 102/117 (87.18%), Query Frame = 0


Query: 29  LAPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYRMNYSNWNLVVQHPNFDNLTQ 88
           L PLVQCT HMCPIRVHWHVK NYKEYWRVKITITNFNYR+NY+ WNLV QHPN DN+TQ
Sbjct: 287 LPPLVQCTRHMCPIRVHWHVKQNYKEYWRVKITITNFNYRLNYTQWNLVAQHPNLDNITQ 346

Query: 89  IFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTLRLIK 146
           IFSFNYKS+ PY  +NDTA+LWGVKFYND L +AGPLGNVQ+E+LFRKDQST    K
Sbjct: 347 IFSFNYKSLTPYAGLNDTAMLWGVKFYNDFLSEAGPLGNVQSEILFRKDQSTFTFEK 403

[Close]

BLAST of Lag0000450 vs. ExPASy Swiss-Prot
Match: Q9SRT7 (COBRA-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=COBL1 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 7.7e-53
Identity = 89/117 (76.07%), Postives = 101/117 (86.32%), Query Frame = 0


Query: 29  LAPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYRMNYSNWNLVVQHPNFDNLTQ 88
           + PLVQCT HMCP+R+HWHVK+NYK+YWRVK+TITNFNY MNYS WNLVVQHPNFDNLTQ
Sbjct: 282 IPPLVQCTKHMCPVRIHWHVKVNYKQYWRVKVTITNFNYNMNYSQWNLVVQHPNFDNLTQ 341

Query: 89  IFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTLRLIK 146
            FSFNYK + PY +INDT ILWG+KFYNDLLMQAGP GNVQ+ELLF+K+ S     K
Sbjct: 342 TFSFNYKPLTPYASINDTGILWGIKFYNDLLMQAGPFGNVQSELLFQKEASAFTFEK 398

[Close]

BLAST of Lag0000450 vs. ExPASy Swiss-Prot
Match: Q8L8Q7 (COBRA-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=COBL2 PE=2 SV=2)

HSP 1 Score: 206.5 bits (524), Expect = 2.9e-52
Identity = 89/112 (79.46%), Postives = 101/112 (90.18%), Query Frame = 0


Query: 26  KNNLAPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYRMNYSNWNLVVQHPNFDN 85
           KNNL PL+QCT HMCPIRVHWHVK +YKEYWRVK+ ITNFNY MNYS WNLVVQHPNFDN
Sbjct: 270 KNNLEPLLQCTQHMCPIRVHWHVKTSYKEYWRVKVAITNFNYNMNYSQWNLVVQHPNFDN 329

Query: 86  LTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKD 138
           LT++FSFNYK +NPY  INDTA+LWG+KFYND L QAGP+GNVQ+ELLF+K+
Sbjct: 330 LTKLFSFNYKPLNPYLNINDTAMLWGIKFYNDFLSQAGPVGNVQSELLFQKN 381

[Close]

BLAST of Lag0000450 vs. ExPASy TrEMBL
Match: A0A0A0KW50 (COBRA-like protein OS=Cucumis sativus OX=3659 GN=Csa_4G129050 PE=3 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 6.5e-63
Identity = 132/180 (73.33%), Postives = 141/180 (78.33%), Query Frame = 0


Query: 26  KNNLAPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYRMNYSNWNLVVQHPNFDN 85
           KNNL PLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNY MNY+NWNLVVQHPNFDN
Sbjct: 280 KNNLTPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYVMNYTNWNLVVQHPNFDN 339

Query: 86  LTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTLRLIK 145
           LTQIFSFNY+SINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQS     K
Sbjct: 340 LTQIFSFNYQSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSDFTFDK 399

Query: 146 AGLSLEGSISMATIVSCHLQMPIPTYQTLVLSKVFR----CYYMLLLISMTLLSFRHSFA 202
            G +    I        +  MP P     + +K  +     + MLLLIS+TLLSF HSFA
Sbjct: 400 -GWAFPRRIYFN---GDNCVMPPPEAYPFLPNKGSKQGVSVFTMLLLISLTLLSFHHSFA 455

[Close]

BLAST of Lag0000450 vs. ExPASy TrEMBL
Match: A0A5A7TQP7 (COBRA-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1202G00140 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.9e-62
Identity = 131/180 (72.78%), Postives = 140/180 (77.78%), Query Frame = 0


Query: 26  KNNLAPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYRMNYSNWNLVVQHPNFDN 85
           KNNL PLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNY MNY+NWNLVVQHPNFDN
Sbjct: 252 KNNLTPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYMMNYTNWNLVVQHPNFDN 311

Query: 86  LTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTLRLIK 145
           LTQIFSFNY+SINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQS     K
Sbjct: 312 LTQIFSFNYQSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSDFTFDK 371

Query: 146 AGLSLEGSISMATIVSCHLQMPIPTYQTLVLSKVFR----CYYMLLLISMTLLSFRHSFA 202
            G +    I        +  MP P     + +K  +     + MLLLIS+ LLSF HSFA
Sbjct: 372 -GWAFPRRIYFN---GDNCVMPPPEAYPYLPNKGSKRGVSVFTMLLLISLALLSFHHSFA 427

[Close]

BLAST of Lag0000450 vs. ExPASy TrEMBL
Match: A0A1S3CMB3 (COBRA-like protein OS=Cucumis melo OX=3656 GN=LOC103502425 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 9.4e-62
Identity = 130/180 (72.22%), Postives = 139/180 (77.22%), Query Frame = 0


Query: 26  KNNLAPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYRMNYSNWNLVVQHPNFDN 85
           KNNL PLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNY MNY+NWNLVVQHPNFDN
Sbjct: 280 KNNLTPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYMMNYTNWNLVVQHPNFDN 339

Query: 86  LTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTLRLIK 145
           LTQIFSFNY+SINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQS     K
Sbjct: 340 LTQIFSFNYQSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSDFTFDK 399

Query: 146 AGLSLEGSISMATIVSCHLQMPIPTYQTLVLSKVFR----CYYMLLLISMTLLSFRHSFA 202
            G +    I        +  MP P     + +K  +     + M LLIS+ LLSF HSFA
Sbjct: 400 -GWAFPRRIYFN---GDNCVMPPPEAYPYLPNKGSKRGVSVFTMRLLISLALLSFHHSFA 455

[Close]

BLAST of Lag0000450 vs. ExPASy TrEMBL
Match: A0A6J1GUP9 (protein COBRA-like OS=Cucurbita moschata OX=3662 GN=LOC111457618 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 7.9e-61
Identity = 128/177 (72.32%), Postives = 137/177 (77.40%), Query Frame = 0


Query: 26  KNNLAPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYRMNYSNWNLVVQHPNFDN 85
           KNN+APLVQCT HMCPIRVHWHVKINYKEYWRVKITITNFNY MNY+NWNLVVQHPNFDN
Sbjct: 359 KNNVAPLVQCTSHMCPIRVHWHVKINYKEYWRVKITITNFNYVMNYTNWNLVVQHPNFDN 418

Query: 86  LTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTLRLIK 145
           LTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLF+KDQST    K
Sbjct: 419 LTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFQKDQSTFTFDK 478

Query: 146 AGLSLEGSISMATIVSCHLQMP--IPTYQTLVLSKVFRCYYMLLLISMTLLSFRHSF 201
            G +    I      +C +  P   P             + MLLLIS+T+LSF H F
Sbjct: 479 -GWAFPRRIYF-NGDNCVMPPPEAYPYLPNTGSKHGVSMFAMLLLISLTILSFHHLF 533

[Close]

BLAST of Lag0000450 vs. ExPASy TrEMBL
Match: A0A6J1IWY0 (COBRA-like protein OS=Cucurbita maxima OX=3661 GN=LOC111479933 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 1.0e-60
Identity = 128/175 (73.14%), Postives = 136/175 (77.71%), Query Frame = 0


Query: 26  KNNLAPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYRMNYSNWNLVVQHPNFDN 85
           KNN+APLVQCT HMCPIRVHWHVKINYKEYWRVKITITNFNY MNY+NWNLVVQHPNFDN
Sbjct: 280 KNNVAPLVQCTSHMCPIRVHWHVKINYKEYWRVKITITNFNYVMNYTNWNLVVQHPNFDN 339

Query: 86  LTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTLRLIK 145
           LTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLF+KDQST    K
Sbjct: 340 LTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFQKDQSTFTFDK 399

Query: 146 AGLSLEGSISMATIVSCHLQMP--IPTYQTLVLSKVFRCYYMLLLISMTLLSFRH 199
            G +    I      +C +  P   P             + MLLLIS+TLLSF H
Sbjct: 400 -GWAFPRRIYF-NGDNCVMPPPEAYPYLPNTGSKHGVTMFTMLLLISLTLLSFHH 452

[Close]

BLAST of Lag0000450 vs. TAIR 10
Match: AT5G60920.1 (COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family )

HSP 1 Score: 209.9 bits (533), Expect = 1.9e-54
Identity = 93/117 (79.49%), Postives = 102/117 (87.18%), Query Frame = 0


Query: 29  LAPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYRMNYSNWNLVVQHPNFDNLTQ 88
           L PLVQCT HMCPIRVHWHVK NYKEYWRVKITITNFNYR+NY+ WNLV QHPN DN+TQ
Sbjct: 287 LPPLVQCTRHMCPIRVHWHVKQNYKEYWRVKITITNFNYRLNYTQWNLVAQHPNLDNITQ 346

Query: 89  IFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTLRLIK 146
           IFSFNYKS+ PY  +NDTA+LWGVKFYND L +AGPLGNVQ+E+LFRKDQST    K
Sbjct: 347 IFSFNYKSLTPYAGLNDTAMLWGVKFYNDFLSEAGPLGNVQSEILFRKDQSTFTFEK 403

[Close]

BLAST of Lag0000450 vs. TAIR 10
Match: AT3G02210.1 (COBRA-like protein 1 precursor )

HSP 1 Score: 208.4 bits (529), Expect = 5.4e-54
Identity = 89/117 (76.07%), Postives = 101/117 (86.32%), Query Frame = 0


Query: 29  LAPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYRMNYSNWNLVVQHPNFDNLTQ 88
           + PLVQCT HMCP+R+HWHVK+NYK+YWRVK+TITNFNY MNYS WNLVVQHPNFDNLTQ
Sbjct: 282 IPPLVQCTKHMCPVRIHWHVKVNYKQYWRVKVTITNFNYNMNYSQWNLVVQHPNFDNLTQ 341

Query: 89  IFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTLRLIK 146
            FSFNYK + PY +INDT ILWG+KFYNDLLMQAGP GNVQ+ELLF+K+ S     K
Sbjct: 342 TFSFNYKPLTPYASINDTGILWGIKFYNDLLMQAGPFGNVQSELLFQKEASAFTFEK 398

[Close]

BLAST of Lag0000450 vs. TAIR 10
Match: AT3G29810.1 (COBRA-like protein 2 precursor )

HSP 1 Score: 206.5 bits (524), Expect = 2.1e-53
Identity = 89/112 (79.46%), Postives = 101/112 (90.18%), Query Frame = 0


Query: 26  KNNLAPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYRMNYSNWNLVVQHPNFDN 85
           KNNL PL+QCT HMCPIRVHWHVK +YKEYWRVK+ ITNFNY MNYS WNLVVQHPNFDN
Sbjct: 270 KNNLEPLLQCTQHMCPIRVHWHVKTSYKEYWRVKVAITNFNYNMNYSQWNLVVQHPNFDN 329

Query: 86  LTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKD 138
           LT++FSFNYK +NPY  INDTA+LWG+KFYND L QAGP+GNVQ+ELLF+K+
Sbjct: 330 LTKLFSFNYKPLNPYLNINDTAMLWGIKFYNDFLSQAGPVGNVQSELLFQKN 381

[Close]

BLAST of Lag0000450 vs. TAIR 10
Match: AT5G15630.1 (COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family )

HSP 1 Score: 187.6 bits (475), Expect = 9.9e-48
Identity = 78/115 (67.83%), Postives = 98/115 (85.22%), Query Frame = 0


Query: 26  KNNLAPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYRMNYSNWNLVVQHPNFDN 85
           K +  PL+QCT HMCP+RVHWHVK NYK+YWRVKI ITNFNYRMN++ W L +QHPN +N
Sbjct: 262 KKDNTPLLQCTHHMCPVRVHWHVKTNYKDYWRVKIAITNFNYRMNHTLWTLAIQHPNLNN 321

Query: 86  LTQIFSFNYKSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQST 141
           +TQ+FSF+YK ++PYG+INDT + +G KFYNDLLM+AGP GNVQ+E+L +KDQ T
Sbjct: 322 VTQVFSFDYKPVSPYGSINDTGMFYGTKFYNDLLMEAGPSGNVQSEVLLQKDQKT 376

[Close]

BLAST of Lag0000450 vs. TAIR 10
Match: AT1G09790.1 (COBRA-like protein 6 precursor )

HSP 1 Score: 173.7 bits (439), Expect = 1.5e-43
Identity = 73/110 (66.36%), Postives = 93/110 (84.55%), Query Frame = 0


Query: 29  LAPLVQCTGHMCPIRVHWHVKINYKEYWRVKITITNFNYRMNYSNWNLVVQHPNFDNLTQ 88
           ++P+V+C+ HMCPIR+HWHVK+NY+EYWRVKIT TNFN   NY+NWNLVV HPN  ++ Q
Sbjct: 279 VSPVVKCSDHMCPIRIHWHVKVNYREYWRVKITATNFNTMKNYTNWNLVVLHPNLKSVQQ 338

Query: 89  IFSFNYKSINPY-GTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKD 138
           +FSFNYKS+ PY  +INDT + WGV+FYND+L+Q G +GNVQTELL +KD
Sbjct: 339 VFSFNYKSLTPYQNSINDTGMFWGVQFYNDVLLQEGKIGNVQTELLLKKD 388

The following BLAST results are available for this feature:

BLAST of Lag0000450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137135.1	1.3e-62	73.33	COBRA-like protein 1 [Cucumis sativus] >KGN53788.1 hypothetical protein Csa_0145...	[more]
XP_038905211.1	2.3e-62	73.60	protein COBRA-like [Benincasa hispida]	[more]
KAA0045480.1	3.9e-62	72.78	COBRA-like protein 1 [Cucumis melo var. makuwa]	[more]
XP_008464583.1	1.9e-61	72.22	PREDICTED: COBRA-like protein 1 [Cucumis melo]	[more]
XP_023526993.1	9.6e-61	72.88	protein COBRA-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lag0000450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6Z4G8	2.8e-55	76.61	COBRA-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L6 PE=2 SV=1	[more]
Q75IW1	4.1e-54	76.67	COBRA-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=BC1L2 PE=2 SV=1	[more]
Q94KT8	2.6e-53	79.49	Protein COBRA OS=Arabidopsis thaliana OX=3702 GN=COB PE=2 SV=1	[more]
Q9SRT7	7.7e-53	76.07	COBRA-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=COBL1 PE=2 SV=1	[more]
Q8L8Q7	2.9e-52	79.46	COBRA-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=COBL2 PE=2 SV=2	[more]

BLAST of Lag0000450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW50	6.5e-63	73.33	COBRA-like protein OS=Cucumis sativus OX=3659 GN=Csa_4G129050 PE=3 SV=1	[more]
A0A5A7TQP7	1.9e-62	72.78	COBRA-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1202G...	[more]
A0A1S3CMB3	9.4e-62	72.22	COBRA-like protein OS=Cucumis melo OX=3656 GN=LOC103502425 PE=3 SV=1	[more]
A0A6J1GUP9	7.9e-61	72.32	protein COBRA-like OS=Cucurbita moschata OX=3662 GN=LOC111457618 PE=3 SV=1	[more]
A0A6J1IWY0	1.0e-60	73.14	COBRA-like protein OS=Cucurbita maxima OX=3661 GN=LOC111479933 PE=3 SV=1	[more]

BLAST of Lag0000450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60920.1	1.9e-54	79.49	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family	[more]
AT3G02210.1	5.4e-54	76.07	COBRA-like protein 1 precursor	[more]
AT3G29810.1	2.1e-53	79.46	COBRA-like protein 2 precursor	[more]
AT5G15630.1	9.9e-48	67.83	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family	[more]
AT1G09790.1	1.5e-43	66.36	COBRA-like protein 6 precursor	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006918	COBRA, plant	PANTHER	PTHR31673	PROTEIN COBRA	coord: 22..158
None	No IPR available	PANTHER	PTHR31673:SF36	COBRA-LIKE PROTEIN	coord: 22..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0000450.1	Lag0000450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010215	cellulose microfibril organization
biological_process	GO:0052324	plant-type cell wall cellulose biosynthetic process
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031225	anchored component of membrane