Lag0000409 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCGGAGTTTGTCCAGAATACTCCAGATCCTGGATAAACCCGACCCTAGCACCAAACTCCATGAGGGGGACTTGATTAGAGACCCGAGGAAGGGGAAGAATCCAGTCGAATATGTGAATGAATCAAAGACAGAATCCAAAGGAAAGAAGACCAACAGCGCAACCAGCAAGGTCAGAGGGCTAAAGCACACAGAGCGCACAGTACTGAGGAGCCCTGAATCAAGTACCAGCCGTAGAACAGACCTGAGAAATCTGATCGAGGAAAAGTGCAGAGTGGCCAAAACTGCCGAGTCTGAGGCCAGAGCTGCCGAGGCCGAGGCTAAGAAAGACCATTTCCCTTGGAAGACTGAGCTTCTAAACACACTAAAGGAGCTTGGAAATCCTCAGGGAGACCTGCCTAAGTTGAAGGATTCGGGAGGCCAAGACATCGAAGAACTAATCGACCAAGTCGACCCACCCTTCACAGAAGAAGTCATGAAAGCTGAGATGCCACAGAAGTTCAAGGTACCTACATTCAGGCCGTATGATGGCAAGAAAGACCCTGTCTAG ATGAATCGGAGTTTGTCCAGAATACTCCAGATCCTGGATAAACCCGACCCTAGCACCAAACTCCATGAGGGGGACTTGATTAGAGACCCGAGGAAGGGGAAGAATCCAGTCGAATATGTGAATGAATCAAAGACAGAATCCAAAGGAAAGAAGACCAACAGCGCAACCAGCAAGGTCAGAGGGCTAAAGCACACAGAGCGCACAGTACTGAGGAGCCCTGAATCAAGTACCAGCCGTAGAACAGACCTGAGAAATCTGATCGAGGAAAAGTGCAGAGTGGCCAAAACTGCCGAGTCTGAGGCCAGAGCTGCCGAGGCCGAGGCTAAGAAAGACCATTTCCCTTGGAAGACTGAGCTTCTAAACACACTAAAGGAGCTTGGAAATCCTCAGGGAGACCTGCCTAAGTTGAAGGATTCGGGAGGCCAAGACATCGAAGAACTAATCGACCAAGTCGACCCACCCTTCACAGAAGAAGTCATGAAAGCTGAGATGCCACAGAAGTTCAAGGTACCTACATTCAGGCCGTATGATGGCAAGAAAGACCCTGTCTAG ATGAATCGGAGTTTGTCCAGAATACTCCAGATCCTGGATAAACCCGACCCTAGCACCAAACTCCATGAGGGGGACTTGATTAGAGACCCGAGGAAGGGGAAGAATCCAGTCGAATATGTGAATGAATCAAAGACAGAATCCAAAGGAAAGAAGACCAACAGCGCAACCAGCAAGGTCAGAGGGCTAAAGCACACAGAGCGCACAGTACTGAGGAGCCCTGAATCAAGTACCAGCCGTAGAACAGACCTGAGAAATCTGATCGAGGAAAAGTGCAGAGTGGCCAAAACTGCCGAGTCTGAGGCCAGAGCTGCCGAGGCCGAGGCTAAGAAAGACCATTTCCCTTGGAAGACTGAGCTTCTAAACACACTAAAGGAGCTTGGAAATCCTCAGGGAGACCTGCCTAAGTTGAAGGATTCGGGAGGCCAAGACATCGAAGAACTAATCGACCAAGTCGACCCACCCTTCACAGAAGAAGTCATGAAAGCTGAGATGCCACAGAAGTTCAAGGTACCTACATTCAGGCCGTATGATGGCAAGAAAGACCCTGTCTAG MNRSLSRILQILDKPDPSTKLHEGDLIRDPRKGKNPVEYVNESKTESKGKKTNSATSKVRGLKHTERTVLRSPESSTSRRTDLRNLIEEKCRVAKTAESEARAAEAEAKKDHFPWKTELLNTLKELGNPQGDLPKLKDSGGQDIEELIDQVDPPFTEEVMKAEMPQKFKVPTFRPYDGKKDPV Homology
BLAST of Lag0000409 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia]) HSP 1 Score: 65.1 bits (157), Expect = 7.3e-07 Identity = 59/168 (35.12%), Postives = 80/168 (47.62%), Query Frame = 0
BLAST of Lag0000409 vs. NCBI nr
Match: XP_022159109.1 (uncharacterized protein LOC111025548 [Momordica charantia]) HSP 1 Score: 58.9 bits (141), Expect = 5.2e-05 Identity = 32/79 (40.51%), Postives = 48/79 (60.76%), Query Frame = 0
BLAST of Lag0000409 vs. NCBI nr
Match: GFS31826.1 (hypothetical protein Acr_00g0019390 [Actinidia rufa]) HSP 1 Score: 58.5 bits (140), Expect = 6.8e-05 Identity = 25/53 (47.17%), Postives = 36/53 (67.92%), Query Frame = 0
BLAST of Lag0000409 vs. NCBI nr
Match: XP_022145129.1 (uncharacterized protein LOC111014646 [Momordica charantia]) HSP 1 Score: 57.8 bits (138), Expect = 1.2e-04 Identity = 58/176 (32.95%), Postives = 87/176 (49.43%), Query Frame = 0
BLAST of Lag0000409 vs. NCBI nr
Match: XP_030939261.1 (uncharacterized protein LOC115964085 [Quercus lobata]) HSP 1 Score: 56.6 bits (135), Expect = 2.6e-04 Identity = 37/125 (29.60%), Postives = 65/125 (52.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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