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Lag0000149 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTACCAGTGAACTCGCTTGCACCTACGCCGCCTTGATTCTTCATGACGACGACATCACCGTCACTGTATGATTATCCTTCTCTCTCTCTCTAAATTCTGTTTTCCTCTATCCATTTGTTCAATCTCTTCTTTCTTTCGATTTTAGGCCGACAAGATCTCCGCATTGGTGAAGGCTGCCGGCCTTACCGTCGAATCCTACTGGCCCTCTCTCTTCGCTAAGCTGGCCTCACAAAGGAACATCGACGATCTCGTTCTCAGCGTCGGATCTGCTTCTGCTGCTGCTCCCGTTACTGCGGCTGCTCCGCTCTCCATGGCGTCTTCCGCCGCCGATAATGCCGCTCCTACGCCCGTCCAGAAGAAGGTATGCGGTTTTATTAATTTCGCAATTACTTTTATATCGATCGAAATTATTCCAAAATCTTGCTCTGCTATTTCATACGTCTTTAATCATAATAACATATACACCGCTTATGCAAGCAATTGAGGCGCGTTTTTACTGGAGCATATATATATATATATGTATTCTTTTCTTGATTGCGTGGTATCTTCATACTGTGTGCGCAGGAAGAGGTCATGGAAGAGAGTGAGGATGACATGGTCTTCGGCTTGTTTGATTAG ATGTCTACCAGTGAACTCGCTTGCACCTACGCCGCCTTGATTCTTCATGACGACGACATCACCGTCACTGCCGACAAGATCTCCGCATTGGTGAAGGCTGCCGGCCTTACCGTCGAATCCTACTGGCCCTCTCTCTTCGCTAAGCTGGCCTCACAAAGGAACATCGACGATCTCGTTCTCAGCGTCGGATCTGCTTCTGCTGCTGCTCCCGTTACTGCGGCTGCTCCGCTCTCCATGGCGTCTTCCGCCGCCGATAATGCCGCTCCTACGCCCGTCCAGAAGAAGGAAGAGGTCATGGAAGAGAGTGAGGATGACATGGTCTTCGGCTTGTTTGATTAG ATGTCTACCAGTGAACTCGCTTGCACCTACGCCGCCTTGATTCTTCATGACGACGACATCACCGTCACTGCCGACAAGATCTCCGCATTGGTGAAGGCTGCCGGCCTTACCGTCGAATCCTACTGGCCCTCTCTCTTCGCTAAGCTGGCCTCACAAAGGAACATCGACGATCTCGTTCTCAGCGTCGGATCTGCTTCTGCTGCTGCTCCCGTTACTGCGGCTGCTCCGCTCTCCATGGCGTCTTCCGCCGCCGATAATGCCGCTCCTACGCCCGTCCAGAAGAAGGAAGAGGTCATGGAAGAGAGTGAGGATGACATGGTCTTCGGCTTGTTTGATTAG MSTSELACTYAALILHDDDITVTADKISALVKAAGLTVESYWPSLFAKLASQRNIDDLVLSVGSASAAAPVTAAAPLSMASSAADNAAPTPVQKKEEVMEESEDDMVFGLFD Homology
BLAST of Lag0000149 vs. NCBI nr
Match: XP_022138164.1 (60S acidic ribosomal protein P1-like isoform X2 [Momordica charantia]) HSP 1 Score: 157.5 bits (397), Expect = 6.6e-35 Identity = 84/112 (75.00%), Postives = 100/112 (89.29%), Query Frame = 0
BLAST of Lag0000149 vs. NCBI nr
Match: XP_022138163.1 (60S acidic ribosomal protein P1-like isoform X1 [Momordica charantia]) HSP 1 Score: 150.6 bits (379), Expect = 8.1e-33 Identity = 80/108 (74.07%), Postives = 96/108 (88.89%), Query Frame = 0
BLAST of Lag0000149 vs. NCBI nr
Match: XP_012843499.1 (PREDICTED: 60S acidic ribosomal protein P1-like [Erythranthe guttata]) HSP 1 Score: 136.7 bits (343), Expect = 1.2e-28 Identity = 75/112 (66.96%), Postives = 86/112 (76.79%), Query Frame = 0
BLAST of Lag0000149 vs. NCBI nr
Match: XP_010525574.1 (PREDICTED: 60S acidic ribosomal protein P1 [Tarenaya hassleriana]) HSP 1 Score: 135.6 bits (340), Expect = 2.7e-28 Identity = 79/113 (69.91%), Postives = 89/113 (78.76%), Query Frame = 0
BLAST of Lag0000149 vs. NCBI nr
Match: XP_010519571.1 (PREDICTED: 60S acidic ribosomal protein P1 [Tarenaya hassleriana]) HSP 1 Score: 135.6 bits (340), Expect = 2.7e-28 Identity = 76/114 (66.67%), Postives = 90/114 (78.95%), Query Frame = 0
BLAST of Lag0000149 vs. ExPASy Swiss-Prot
Match: P52855 (60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 2.8e-28 Identity = 70/112 (62.50%), Postives = 84/112 (75.00%), Query Frame = 0
BLAST of Lag0000149 vs. ExPASy Swiss-Prot
Match: O23095 (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 SV=2) HSP 1 Score: 111.3 bits (277), Expect = 7.1e-24 Identity = 63/115 (54.78%), Postives = 85/115 (73.91%), Query Frame = 0
BLAST of Lag0000149 vs. ExPASy Swiss-Prot
Match: Q8LEQ0 (60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 SV=2) HSP 1 Score: 109.4 bits (272), Expect = 2.7e-23 Identity = 65/115 (56.52%), Postives = 85/115 (73.91%), Query Frame = 0
BLAST of Lag0000149 vs. ExPASy Swiss-Prot
Match: Q8LCW9 (60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 SV=2) HSP 1 Score: 108.2 bits (269), Expect = 6.0e-23 Identity = 63/114 (55.26%), Postives = 84/114 (73.68%), Query Frame = 0
BLAST of Lag0000149 vs. ExPASy Swiss-Prot
Match: P47955 (60S acidic ribosomal protein P1 OS=Mus musculus OX=10090 GN=Rplp1 PE=1 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 6.0e-23 Identity = 65/113 (57.52%), Postives = 79/113 (69.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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