IVF0027066 (gene) Melon (IVF77) v1

Overview
NameIVF0027066
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr08: 6011929 .. 6012286 (-)
RNA-Seq ExpressionIVF0027066
SyntenyIVF0027066
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTTTTCTTGGTTCTGGCCAGACCTCTAGCGGCCTATCAATCTATCAAATAGTTAATTTTAGCCAGGTGCCATAGCTACTCTTCTGATTCGGCTTGTAAACAAGGGTTTTTGCTTGCTGTCACTGGTGGAGCCTCAACGGTCTGTTATCCAGTGTTCTTGATGCTGTTTTGATCTATATGGGCCTGCTATCTGTACTTTGTGTTTAGGGATGGAACATTTCACCCCAAACTGGTGGGGTGGTGGTGTCTCATATGGATGCCCTTAAGCTTCTGGTCCTACAGCCAATGCATCGTCCTTAAAGATTGTCTTGTCCAATCCTTTAGGAGATGCTTAACTCACCGGTTGTTTATATAG

mRNA sequence

ATGATTTTTCTTGGTTCTGGCCAGACCTCTAGCGGCCTATCAATCTATCAAATAGTTAATTTTAGCCAGGTGGATGGAACATTTCACCCCAAACTGGTGGGGTGGTGGTGTCTCATATGGATGCCCTTAAGCTTCTGGTCCTACAGCCAATGCATCGTCCTTAAAGATTGTCTTGTCCAATCCTTTAGGAGATGCTTAACTCACCGGTTGTTTATATAG

Coding sequence (CDS)

ATGATTTTTCTTGGTTCTGGCCAGACCTCTAGCGGCCTATCAATCTATCAAATAGTTAATTTTAGCCAGGTGGATGGAACATTTCACCCCAAACTGGTGGGGTGGTGGTGTCTCATATGGATGCCCTTAAGCTTCTGGTCCTACAGCCAATGCATCGTCCTTAAAGATTGTCTTGTCCAATCCTTTAGGAGATGCTTAACTCACCGGTTGTTTATATAG

Protein sequence

MIFLGSGQTSSGLSIYQIVNFSQVDGTFHPKLVGWWCLIWMPLSFWSYSQCIVLKDCLVQSFRRCLTHRLFI
Homology
[Close]
BLAST of IVF0027066 vs. ExPASy TrEMBL
Match: A0A0A0KGP4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G506020 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.9e-17
Identity = 52/83 (62.65%), Postives = 53/83 (63.86%), Query Frame = 0 

Query: 1  MIFLGSGQTSSGLSIYQIVNFS------------------------QVDGTFHPKLVGWW 60
          MIFL SGQTS GLSIYQIV FS                        Q+DGTFHPKLVGWW
Sbjct: 1  MIFLRSGQTSCGLSIYQIVYFSQSDSYSSDLAWKQGFCLQSLAEPLQLDGTFHPKLVGWW 60

[Close]
BLAST of IVF0027066 vs. NCBI nr
Match: KGN48925.1 (hypothetical protein Csa_003288 [Cucumis sativus])

HSP 1 Score: 99.4 bits (246), Expect = 2.49e-25
Identity = 52/83 (62.65%), Postives = 53/83 (63.86%), Query Frame = 0 

Query: 1  MIFLGSGQTSSGLSIYQIVNFSQ------------------------VDGTFHPKLVGWW 59
          MIFL SGQTS GLSIYQIV FSQ                        +DGTFHPKLVGWW
Sbjct: 1  MIFLRSGQTSCGLSIYQIVYFSQSDSYSSDLAWKQGFCLQSLAEPLQLDGTFHPKLVGWW 60

The following BLAST results are available for this feature:
BLAST of IVF0027066 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0027066 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGP41.9e-1762.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G506020 PE=4 SV=1[more]
BLAST of IVF0027066 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN48925.12.49e-2562.65hypothetical protein Csa_003288 [Cucumis sativus][more]
BLAST of IVF0027066 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0027066.1IVF0027066.1mRNA