IVF0027007 (gene) Melon (IVF77) v1

Overview


Name	IVF0027007
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	dnaJ homolog subfamily C member 28
Location	chr04: 30325142 .. 30327935 (+)
RNA-Seq Expression	IVF0027007
Synteny	IVF0027007

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGGGAGCAACGTGGAAGAGCTCCAATTGCCGTTTGTGGCCACAATCTCTGCCAAATTCCTAATTTAGGAAACCCCTCCGCGGCGCCCGCCCTCAGCTCGATTCTCCGCCATGGCGACTCGCCTTCCGACGACGAAGCCATTCTCTTTTCTAACGTCGAGATCATTTCCCGACGACAACTCTCTGGTTGCCGCTTTCAGCGGATCTAGCCGAAGGTGGGCATCGTCGTCGTCGTCCTCGACGACGTCGCCGCCGGGTAAATCACAGAAAACGGAGAAGAACTTAGTGGACCGTCTTTCATCGGTGATAGACGCAGTCAACGACCGTAAACTTCCTCCAGAGCTCCGAGGCCAACGTAACTCTGTCAGGTTATCCCTGCCGTTACTTCATATCTGATTTACCCTATCTGATTCTTTCTGCCCTCTTTGATTTTCGAGATGTAATCCTGATTCTTGGTTTTGGTTGATATTTTGTTAACTCATGTAACATTGTCTACCTTTTTTGTATCTGAAATTGATCGTGGTCTATGAATTCTGCATTCCTTTTCTTGTCACAAAGATTATCATTACAAATACGCTTACTGAAGATTGTTTTCCCCTTTATGTGATTTCATTCTCACTCACTTCCATTCCAATCCTTGAAACTTAGAGGTATTGAACTATCGACCAAATATGCAGGAACTTATTAGCAATACTTCTATCTCCGTTGGAAAAAACAAATAAATAAACAAACCTTGAGTTTATAGCCATGAACAGCAAGGCTAGTCATATTCATATTATGCTATCATTTCTATGTAAATTTATGGTTCTTGTTCAATTTCTTGAAATTAAGGCTATCTTATTCTTCACTATGATGAACATTTTATCTTGCACTATATTGAAGGGCTTTGCTTGTCAGCTACTGTTGGGTTGATTAGTTAGGATATTTTGGACAGGTCGGAAACTGATCTGATAAATGTTGTTGAGCGGAGGATTTGGAATTCCATGGAAGAAGGGCAATTTGAGAATTTACCAGGAAAAGGGAAACCTCTGAACCTGTCTATCAATCCTCATGCTGATCCAGCAGAAGACACATTGTATCGGATCTTGTCCAAGAATGGATGTGCACCTGAATGGATCGAACTCAACAAAGAGATCAGGAGTAACATATCCGAATGGCGGTCGTCGTTGAAGAAAGCATTCGAGAGTAGAGGCAATGGCGATCATTCAATATGGACTGAGAGTAAAAAGGCTTTGCAAGCTCAATTGCAACACATAAATAACAAGGTTAGTTATCAGTTTCATGGCTTTTTGAGAATGGAAAATTGATACCTAAGTTCTTATTCAATATCGTATACTTATTAGTATGTTAAATCACCAATTGACCTAAAAATTGAAGTTGATGAATGAAAATAAATCTAATATTATATTATCTAACATGACCAGAAGTTGGTTAATCCGATCCAACCTCTCTAAAATAGTTATCAGCTGGAATTCTTTTATCTTAAGACTAGAAGACTTACTAGTCAATTTGATTTGGTTTGTCTCAAACTAGACCCTTTTAAAATTGCATATTTGATAGAAAATGCCCTATTTTGATCCCATTAATGAAACTTGAGCACTTTTGAGTTCCTATTTTGGAGAAATCAATGAATCACATACTCTTTATAAGATAGATGAACTATTTCACTCCTTGCTAATTGATTTTGAGATAAAACATCGTGTTATCTAATAGCGTTTAGTTAGTGTATGCATTGTATTCCACAACCATTATAAACAATGTAGTTTTTATTGGCAGGTTTTTCGGTATAACTTAATAGTTCCTTTTGGGCGCCAAATGTTTGGATTGAAATGGGAGAAAGAGATGGATCGTCTTGTAGAATGAAGTAAGTTGTTTTTTTCTCTTTGAGCTTGCATTGGTTTTGTTTTTCAGGTAAGATCAGCATTATCCATATCTTTACAGATATAAAATTTGTAGAAGTCATAGAATTAAGAAGAAAAGAATTTGTAGTATTTTTGGCATATACAAAATGGTATCACTTTCATAGGCGCAGCTGAAAGTTGTTTAAGAATGTACTAGCAAAAAACTTGTCATTAATTATATGAGATGAACTTTTTAGTGAGTGTTCTCGGCATTTTTCTTTCCACTTGGTGAGTGTATTTTATTTCATTTTTTATTTAATTAGAAGTTTAATATCTTCGTTAAATTAGAATTAACTACAAATTGGATTATCTTTTTCTTCATAAATTGCTTTCCTTTTTCTTTTTCTTGGCGTCTATTTTTCAACTGTTCTCGACTTTTTGACAATGTTTTCCTTCAATTATTACTCATGCTCCCTACTTTAATTTTGCTAAACTTTTTTTATTGACCGTCTCGTGGATTTCGCATCATTATACTTGTGTTCATAATAGTGAATATTTGATTTAGTATCACATTTAAATTTTGCTTTAATCAAACAAATGCGTGTGGGTAAGCGCACGTGCAGCGTATTTGGTACTAAAAGGTGAATGTAAATTTAAGATTATATCAACAATTTTCAACATGTATTTGGTATTAAATTCTAGCTTATCTAGGTAGTAAAATATACTGTGTACTTTATAGAAATTTCGATTCTTCAAGAGTTTGTTTATTGATGAAATCAAATTGTTGTAAAAGGAACTATACCAATATCGAAGCAATCAAACTATGAGCTAACAATATCCGTAAACCAATACTCCAAGGAAGAAAGAGTACGATGATGAGCAACTAGGAACATAGATGGGGAACGAAATTATAGAGAAATCAAAAGATGATTGTCAAATACAAAATGAAAGAGG

mRNA sequence

ACGGGAGCAACGTGGAAGAGCTCCAATTGCCGTTTGTGGCCACAATCTCTGCCAAATTCCTAATTTAGGAAACCCCTCCGCGGCGCCCGCCCTCAGCTCGATTCTCCGCCATGGCGACTCGCCTTCCGACGACGAAGCCATTCTCTTTTCTAACGTCGAGATCATTTCCCGACGACAACTCTCTGGTTGCCGCTTTCAGCGGATCTAGCCGAAGGTGGGCATCGTCGTCGTCGTCCTCGACGACGTCGCCGCCGGGTAAATCACAGAAAACGGAGAAGAACTTAGTGGACCGTCTTTCATCGGTGATAGACGCAGTCAACGACCGTAAACTTCCTCCAGAGCTCCGAGGCCAACGTAACTCTGTCAGGTCGGAAACTGATCTGATAAATGTTGTTGAGCGGAGGATTTGGAATTCCATGGAAGAAGGGCAATTTGAGAATTTACCAGGAAAAGGGAAACCTCTGAACCTGTCTATCAATCCTCATGCTGATCCAGCAGAAGACACATTGTATCGGATCTTGTCCAAGAATGGATGTGCACCTGAATGGATCGAACTCAACAAAGAGATCAGGAGTAACATATCCGAATGGCGGTCGTCGTTGAAGAAAGCATTCGAGAGTAGAGGCAATGGCGATCATTCAATATGGACTGAGAGTAAAAAGGCTTTGCAAGCTCAATTGCAACACATAAATAACAAGGTTTTTCGGTATAACTTAATAGTTCCTTTTGGGCGCCAAATGTTTGGATTGAAATGGGAGAAAGAGATGGATCGTCTTGTAGAATGAAGAACTATACCAATATCGAAGCAATCAAACTATGAGCTAACAATATCCGTAAACCAATACTCCAAGGAAGAAAGAGTACGATGATGAGCAACTAGGAACATAGATGGGGAACGAAATTATAGAGAAATCAAAAGATGATTGTCAAATACAAAATGAAAGAGG

Coding sequence (CDS)

ATGGCGACTCGCCTTCCGACGACGAAGCCATTCTCTTTTCTAACGTCGAGATCATTTCCCGACGACAACTCTCTGGTTGCCGCTTTCAGCGGATCTAGCCGAAGGTGGGCATCGTCGTCGTCGTCCTCGACGACGTCGCCGCCGGGTAAATCACAGAAAACGGAGAAGAACTTAGTGGACCGTCTTTCATCGGTGATAGACGCAGTCAACGACCGTAAACTTCCTCCAGAGCTCCGAGGCCAACGTAACTCTGTCAGGTCGGAAACTGATCTGATAAATGTTGTTGAGCGGAGGATTTGGAATTCCATGGAAGAAGGGCAATTTGAGAATTTACCAGGAAAAGGGAAACCTCTGAACCTGTCTATCAATCCTCATGCTGATCCAGCAGAAGACACATTGTATCGGATCTTGTCCAAGAATGGATGTGCACCTGAATGGATCGAACTCAACAAAGAGATCAGGAGTAACATATCCGAATGGCGGTCGTCGTTGAAGAAAGCATTCGAGAGTAGAGGCAATGGCGATCATTCAATATGGACTGAGAGTAAAAAGGCTTTGCAAGCTCAATTGCAACACATAAATAACAAGGTTTTTCGGTATAACTTAATAGTTCCTTTTGGGCGCCAAATGTTTGGATTGAAATGGGAGAAAGAGATGGATCGTCTTGTAGAATGA

Protein sequence

MATRLPTTKPFSFLTSRSFPDDNSLVAAFSGSSRRWASSSSSSTTSPPGKSQKTEKNLVDRLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGKPLNLSINPHADPAEDTLYRILSKNGCAPEWIELNKEIRSNISEWRSSLKKAFESRGNGDHSIWTESKKALQAQLQHINNKVFRYNLIVPFGRQMFGLKWEKEMDRLVE

Homology

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BLAST of IVF0027007 vs. ExPASy Swiss-Prot
Match: Q8VCE1 (DnaJ homolog subfamily C member 28 OS=Mus musculus OX=10090 GN=Dnajc28 PE=1 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 7.8e-14
Identity = 50/137 (36.50%), Postives = 73/137 (53.28%), Query Frame = 0


Query: 94  VVERRIWNSMEEGQFENLPGKGKPL-NLSINPHADPAEDTLYRILSKNGCAPEWIELNKE 153
           +VE  I  SM +G F+NL GKGKPL   S   + DP    L RIL  NG  PEWI + KE
Sbjct: 203 LVEDLIQESMAKGDFDNLSGKGKPLKKFSGCSYIDPMTHNLNRILIDNGYQPEWILMQKE 262

Query: 154 IRSNISEWRSSLKKAFESRGN----GDHSIWTESKKALQAQLQHINNKVFRYNLIVP-FG 213
           I+  I + R +L  + +  GN     +   W +  +  Q +++ +N ++  +NLIVP   
Sbjct: 263 IKDTIEQLREALLMSRKKLGNPLSPTEQKQWAQVCEQFQEKIRKLNKRINDFNLIVPILT 322

Query: 214 RQMFGLKWEKEMDRLVE 225
           RQ      +KE+ R+ E
Sbjct: 323 RQKVHFDAQKEIIRVQE 339

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BLAST of IVF0027007 vs. ExPASy Swiss-Prot
Match: Q9NX36 (DnaJ homolog subfamily C member 28 OS=Homo sapiens OX=9606 GN=DNAJC28 PE=1 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 7.3e-12
Identity = 48/134 (35.82%), Postives = 67/134 (50.00%), Query Frame = 0


Query: 94  VVERRIWNSMEEGQFENLPGKGKPL-NLSINPHADPAEDTLYRILSKNGCAPEWIELNKE 153
           +VE  I  SM +G F+NL GKGKPL   S   + DP    L RIL  NG  PEWI   KE
Sbjct: 203 LVEDLIQESMAKGDFDNLSGKGKPLKKFSDCSYIDPMTHNLNRILIDNGYQPEWILKQKE 262

Query: 154 IRSNISEWRSSLKKAFESRGN----GDHSIWTESKKALQAQLQHINNKVFRYNLIVP-FG 213
           I   I + R ++  + +  GN     +   W    +  Q  ++ +N ++  +NLIVP   
Sbjct: 263 ISDTIEQLREAILVSRKKLGNPMTPTEKKQWNHVCEQFQENIRKLNKRINDFNLIVPILT 322

Query: 214 RQMFGLKWEKEMDR 222
           RQ      +KE+ R
Sbjct: 323 RQKVHFDAQKEIVR 336

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BLAST of IVF0027007 vs. ExPASy Swiss-Prot
Match: P36677 (Uncharacterized protein YhdN OS=Escherichia coli (strain K12) OX=83333 GN=yhdN PE=4 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.5e-04
Identity = 22/57 (38.60%), Postives = 31/57 (54.39%), Query Frame = 0


Query: 96  ERRIWNSMEEGQFENLPGKGKPLNLSINPHADPAEDTLYRILSKNGCAPEWIELNKE 153
           ER I  +  +G+F+NL G G+PL L  + H  P     YR+L   GC P  +E  +E
Sbjct: 9   ERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELEQRRE 65

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BLAST of IVF0027007 vs. ExPASy TrEMBL
Match: A0A1S3B761 (dnaJ homolog subfamily C member 28 OS=Cucumis melo OX=3656 GN=LOC103486543 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 9.0e-122
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MATRLPTTKPFSFLTSRSFPDDNSLVAAFSGSSRRWASSSSSSTTSPPGKSQKTEKNLVD 60
           MATRLPTTKPFSFLTSRSFPDDNSLVAAFSGSSRRWASSSSSSTTSPPGKSQKTEKNLVD
Sbjct: 1   MATRLPTTKPFSFLTSRSFPDDNSLVAAFSGSSRRWASSSSSSTTSPPGKSQKTEKNLVD 60

Query: 61  RLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGKPLNL 120
           RLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGKPLNL
Sbjct: 61  RLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGKPLNL 120

Query: 121 SINPHADPAEDTLYRILSKNGCAPEWIELNKEIRSNISEWRSSLKKAFESRGNGDHSIWT 180
           SINPHADPAEDTLYRILSKNGCAPEWIELNKEIRSNISEWRSSLKKAFESRGNGDHSIWT
Sbjct: 121 SINPHADPAEDTLYRILSKNGCAPEWIELNKEIRSNISEWRSSLKKAFESRGNGDHSIWT 180

Query: 181 ESKKALQAQLQHINNKVFRYNLIVPFGRQMFGLKWEKEMDRLVE 225
           ESKKALQAQLQHINNKVFRYNLIVPFGRQMFGLKWEKEMDRLVE
Sbjct: 181 ESKKALQAQLQHINNKVFRYNLIVPFGRQMFGLKWEKEMDRLVE 224

[Close]

BLAST of IVF0027007 vs. ExPASy TrEMBL
Match: A0A0A0LGF4 (DUF1992 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G746580 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 2.2e-112
Identity = 208/224 (92.86%), Postives = 213/224 (95.09%), Query Frame = 0


Query: 1   MATRLPTTKPFSFLTSRSFPDDNSLVAAFSGSSRRWASSSSSSTTSPPGKSQKTEKNLVD 60
           MATRLPTTKPFSFLTSR FPD+NSL AA  GSSRRWA   SS+T SPPGKSQKTEK LVD
Sbjct: 52  MATRLPTTKPFSFLTSRLFPDENSLAAALIGSSRRWA---SSTTASPPGKSQKTEKKLVD 111

Query: 61  RLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGKPLNL 120
           RLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGKPLNL
Sbjct: 112 RLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGKPLNL 171

Query: 121 SINPHADPAEDTLYRILSKNGCAPEWIELNKEIRSNISEWRSSLKKAFESRGNGDHSIWT 180
           SINPHADPAEDTLYRILSKNGCAPEW+ELNKEIRSNISEWRSSLKKAFESRGNGDHSIWT
Sbjct: 172 SINPHADPAEDTLYRILSKNGCAPEWVELNKEIRSNISEWRSSLKKAFESRGNGDHSIWT 231

Query: 181 ESKKALQAQLQHINNKVFRYNLIVPFGRQMFGLKWEKEMDRLVE 225
           ESK+ LQ QLQHIN+KVFRYNLIVPFGRQMFGLKWEKEMDRLVE
Sbjct: 232 ESKEGLQVQLQHINDKVFRYNLIVPFGRQMFGLKWEKEMDRLVE 272

[Close]

BLAST of IVF0027007 vs. ExPASy TrEMBL
Match: A0A5A7TQ49 (DnaJ-like protein subfamily C member 28 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003210 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.3e-104
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MATRLPTTKPFSFLTSRSFPDDNSLVAAFSGSSRRWASSSSSSTTSPPGKSQKTEKNLVD 60
           MATRLPTTKPFSFLTSRSFPDDNSLVAAFSGSSRRWASSSSSSTTSPPGKSQKTEKNLVD
Sbjct: 1   MATRLPTTKPFSFLTSRSFPDDNSLVAAFSGSSRRWASSSSSSTTSPPGKSQKTEKNLVD 60

Query: 61  RLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGKPLNL 120
           RLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGKPLNL
Sbjct: 61  RLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGKPLNL 120

Query: 121 SINPHADPAEDTLYRILSKNGCAPEWIELNKEIRSNISEWRSSLKKAFESRGNGDHSIWT 180
           SINPHADPAEDTLYRILSKNGCAPEWIELNKEIRSNISEWRSSLKKAFESRGNGDHSIWT
Sbjct: 121 SINPHADPAEDTLYRILSKNGCAPEWIELNKEIRSNISEWRSSLKKAFESRGNGDHSIWT 180

Query: 181 ESKKALQAQLQHINNKV 198
           ESKKALQAQLQHINNKV
Sbjct: 181 ESKKALQAQLQHINNKV 197

[Close]

BLAST of IVF0027007 vs. ExPASy TrEMBL
Match: A0A6J1FNC7 (dnaJ homolog subfamily C member 28-like OS=Cucurbita moschata OX=3662 GN=LOC111446735 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.5e-97
Identity = 191/228 (83.77%), Postives = 199/228 (87.28%), Query Frame = 0


Query: 1   MATRLPTTKPFSFLTSRSFPDDNSLVAAFSGSSRRWA----SSSSSSTTSPPGKSQKTEK 60
           MATRLP TK F  LTSRS  DD S +A    S RRWA    SSSSSS++SPP KSQKTEK
Sbjct: 41  MATRLPRTKLFWSLTSRSSADDYSPMAVLIRSRRRWASSSSSSSSSSSSSPPSKSQKTEK 100

Query: 61  NLVDRLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGK 120
             VDRLSSVIDAVNDRKLPPE RGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGK
Sbjct: 101 KFVDRLSSVIDAVNDRKLPPEFRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGK 160

Query: 121 PLNLSINPHADPAEDTLYRILSKNGCAPEWIELNKEIRSNISEWRSSLKKAFESRGNGDH 180
           PLNLS NPHADPAEDTLYRILSKNGCAPEW+ELNKEIRSNIS WRSSLKKAFESRGN D 
Sbjct: 161 PLNLSTNPHADPAEDTLYRILSKNGCAPEWVELNKEIRSNISVWRSSLKKAFESRGNEDL 220

Query: 181 SIWTESKKALQAQLQHINNKVFRYNLIVPFGRQMFGLKWEKEMDRLVE 225
           S WTES +AL+ QLQHIN+KVFRYNLIVPFGRQM GLKWEKE+DRLVE
Sbjct: 221 SKWTESSEALKVQLQHINDKVFRYNLIVPFGRQMSGLKWEKELDRLVE 268

[Close]

BLAST of IVF0027007 vs. ExPASy TrEMBL
Match: A0A6J1KSG4 (dnaJ homolog subfamily C member 28-like OS=Cucurbita maxima OX=3661 GN=LOC111498294 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.9e-96
Identity = 188/227 (82.82%), Postives = 199/227 (87.67%), Query Frame = 0


Query: 1   MATRLPTTKPFSFLTSRSFPDDNSLVAAFSGSSRRWA---SSSSSSTTSPPGKSQKTEKN 60
           MATRLP TK F   TSRS  DD S +A    S RRWA   SSSSSS++SPP KSQKTEK 
Sbjct: 1   MATRLPRTKLFWSPTSRSSADDYSQMAVLIRSRRRWASSSSSSSSSSSSPPSKSQKTEKK 60

Query: 61  LVDRLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGKP 120
            VDRLSSVIDAVNDRKLPPELRGQRNSVRSETDL+N+VERRIWNSMEEGQFENLPGKGKP
Sbjct: 61  FVDRLSSVIDAVNDRKLPPELRGQRNSVRSETDLMNLVERRIWNSMEEGQFENLPGKGKP 120

Query: 121 LNLSINPHADPAEDTLYRILSKNGCAPEWIELNKEIRSNISEWRSSLKKAFESRGNGDHS 180
           LNLS NPHADPAEDTLYRILSKNGCAPEW+ELNKEIRSNIS WRSSLK+AFESRGN D S
Sbjct: 121 LNLSTNPHADPAEDTLYRILSKNGCAPEWVELNKEIRSNISVWRSSLKEAFESRGNEDLS 180

Query: 181 IWTESKKALQAQLQHINNKVFRYNLIVPFGRQMFGLKWEKEMDRLVE 225
            WTES +AL+ QLQHIN+KVFRYNLIVPFGRQM GLKWEKE+DRLVE
Sbjct: 181 KWTESSEALKVQLQHINDKVFRYNLIVPFGRQMSGLKWEKELDRLVE 227

[Close]

BLAST of IVF0027007 vs. NCBI nr
Match: XP_008442765.1 (PREDICTED: dnaJ homolog subfamily C member 28 [Cucumis melo])

HSP 1 Score: 449 bits (1155), Expect = 3.52e-159
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MATRLPTTKPFSFLTSRSFPDDNSLVAAFSGSSRRWASSSSSSTTSPPGKSQKTEKNLVD 60
           MATRLPTTKPFSFLTSRSFPDDNSLVAAFSGSSRRWASSSSSSTTSPPGKSQKTEKNLVD
Sbjct: 1   MATRLPTTKPFSFLTSRSFPDDNSLVAAFSGSSRRWASSSSSSTTSPPGKSQKTEKNLVD 60

Query: 61  RLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGKPLNL 120
           RLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGKPLNL
Sbjct: 61  RLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGKPLNL 120

Query: 121 SINPHADPAEDTLYRILSKNGCAPEWIELNKEIRSNISEWRSSLKKAFESRGNGDHSIWT 180
           SINPHADPAEDTLYRILSKNGCAPEWIELNKEIRSNISEWRSSLKKAFESRGNGDHSIWT
Sbjct: 121 SINPHADPAEDTLYRILSKNGCAPEWIELNKEIRSNISEWRSSLKKAFESRGNGDHSIWT 180

Query: 181 ESKKALQAQLQHINNKVFRYNLIVPFGRQMFGLKWEKEMDRLVE 224
           ESKKALQAQLQHINNKVFRYNLIVPFGRQMFGLKWEKEMDRLVE
Sbjct: 181 ESKKALQAQLQHINNKVFRYNLIVPFGRQMFGLKWEKEMDRLVE 224

[Close]

BLAST of IVF0027007 vs. NCBI nr
Match: XP_004137995.3 (uncharacterized protein LOC101220350 isoform X1 [Cucumis sativus])

HSP 1 Score: 418 bits (1074), Expect = 4.41e-146
Identity = 208/224 (92.86%), Postives = 213/224 (95.09%), Query Frame = 0


Query: 1   MATRLPTTKPFSFLTSRSFPDDNSLVAAFSGSSRRWASSSSSSTTSPPGKSQKTEKNLVD 60
           MATRLPTTKPFSFLTSR FPD+NSL AA  GSSRRWASS+   T SPPGKSQKTEK LVD
Sbjct: 52  MATRLPTTKPFSFLTSRLFPDENSLAAALIGSSRRWASST---TASPPGKSQKTEKKLVD 111

Query: 61  RLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGKPLNL 120
           RLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGKPLNL
Sbjct: 112 RLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGKPLNL 171

Query: 121 SINPHADPAEDTLYRILSKNGCAPEWIELNKEIRSNISEWRSSLKKAFESRGNGDHSIWT 180
           SINPHADPAEDTLYRILSKNGCAPEW+ELNKEIRSNISEWRSSLKKAFESRGNGDHSIWT
Sbjct: 172 SINPHADPAEDTLYRILSKNGCAPEWVELNKEIRSNISEWRSSLKKAFESRGNGDHSIWT 231

Query: 181 ESKKALQAQLQHINNKVFRYNLIVPFGRQMFGLKWEKEMDRLVE 224
           ESK+ LQ QLQHIN+KVFRYNLIVPFGRQMFGLKWEKEMDRLVE
Sbjct: 232 ESKEGLQVQLQHINDKVFRYNLIVPFGRQMFGLKWEKEMDRLVE 272

[Close]

BLAST of IVF0027007 vs. NCBI nr
Match: KAA0043947.1 (dnaJ-like protein subfamily C member 28 [Cucumis melo var. makuwa] >TYK25193.1 dnaJ-like protein subfamily C member 28 [Cucumis melo var. makuwa])

HSP 1 Score: 391 bits (1005), Expect = 1.51e-136
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MATRLPTTKPFSFLTSRSFPDDNSLVAAFSGSSRRWASSSSSSTTSPPGKSQKTEKNLVD 60
           MATRLPTTKPFSFLTSRSFPDDNSLVAAFSGSSRRWASSSSSSTTSPPGKSQKTEKNLVD
Sbjct: 1   MATRLPTTKPFSFLTSRSFPDDNSLVAAFSGSSRRWASSSSSSTTSPPGKSQKTEKNLVD 60

Query: 61  RLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGKPLNL 120
           RLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGKPLNL
Sbjct: 61  RLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGKPLNL 120

Query: 121 SINPHADPAEDTLYRILSKNGCAPEWIELNKEIRSNISEWRSSLKKAFESRGNGDHSIWT 180
           SINPHADPAEDTLYRILSKNGCAPEWIELNKEIRSNISEWRSSLKKAFESRGNGDHSIWT
Sbjct: 121 SINPHADPAEDTLYRILSKNGCAPEWIELNKEIRSNISEWRSSLKKAFESRGNGDHSIWT 180

Query: 181 ESKKALQAQLQHINNKV 197
           ESKKALQAQLQHINNKV
Sbjct: 181 ESKKALQAQLQHINNKV 197

[Close]

BLAST of IVF0027007 vs. NCBI nr
Match: KAE8651062.1 (hypothetical protein Csa_000899 [Cucumis sativus])

HSP 1 Score: 387 bits (993), Expect = 6.27e-134
Identity = 196/224 (87.50%), Postives = 201/224 (89.73%), Query Frame = 0


Query: 1   MATRLPTTKPFSFLTSRSFPDDNSLVAAFSGSSRRWASSSSSSTTSPPGKSQKTEKNLVD 60
           MATRLPTTKPFSFLTSR FPD+NSL AA  GSSRRWASS+   T SPPGKSQKTEK LVD
Sbjct: 52  MATRLPTTKPFSFLTSRLFPDENSLAAALIGSSRRWASST---TASPPGKSQKTEKKLVD 111

Query: 61  RLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGKPLNL 120
           RLSSVIDAVNDRKLPPELRGQRNSVR            IWNSMEEGQFENLPGKGKPLNL
Sbjct: 112 RLSSVIDAVNDRKLPPELRGQRNSVR------------IWNSMEEGQFENLPGKGKPLNL 171

Query: 121 SINPHADPAEDTLYRILSKNGCAPEWIELNKEIRSNISEWRSSLKKAFESRGNGDHSIWT 180
           SINPHADPAEDTLYRILSKNGCAPEW+ELNKEIRSNISEWRSSLKKAFESRGNGDHSIWT
Sbjct: 172 SINPHADPAEDTLYRILSKNGCAPEWVELNKEIRSNISEWRSSLKKAFESRGNGDHSIWT 231

Query: 181 ESKKALQAQLQHINNKVFRYNLIVPFGRQMFGLKWEKEMDRLVE 224
           ESK+ LQ QLQHIN+KVFRYNLIVPFGRQMFGLKWEKEMDRLVE
Sbjct: 232 ESKEGLQVQLQHINDKVFRYNLIVPFGRQMFGLKWEKEMDRLVE 260

[Close]

BLAST of IVF0027007 vs. NCBI nr
Match: XP_038904150.1 (dnaJ homolog subfamily C member 28 [Benincasa hispida])

HSP 1 Score: 371 bits (953), Expect = 1.95e-128
Identity = 190/226 (84.07%), Postives = 200/226 (88.50%), Query Frame = 0


Query: 1   MATRLPTTKPFSFLTSRSFPDDNSLVAAFSGSSRRWASSSSSSTTSP--PGKSQKTEKNL 60
           MATRLP  KPFS LTS+  P     +A   G  RRW+SSSSSS++S   P KSQK+EK L
Sbjct: 1   MATRLPRIKPFSSLTSKPSP-----IAVLIGYRRRWSSSSSSSSSSSSSPSKSQKSEKKL 60

Query: 61  VDRLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGQFENLPGKGKPL 120
           VDRLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEG+FENLPGKGKPL
Sbjct: 61  VDRLSSVIDAVNDRKLPPELRGQRNSVRSETDLINVVERRIWNSMEEGKFENLPGKGKPL 120

Query: 121 NLSINPHADPAEDTLYRILSKNGCAPEWIELNKEIRSNISEWRSSLKKAFESRGNGDHSI 180
           NLS NPHADPAEDTLYRILSKNGCAPEW+ELNKEIRSNIS WRSSLKKAFESR NGDHS 
Sbjct: 121 NLSSNPHADPAEDTLYRILSKNGCAPEWVELNKEIRSNISVWRSSLKKAFESRSNGDHSK 180

Query: 181 WTESKKALQAQLQHINNKVFRYNLIVPFGRQMFGLKWEKEMDRLVE 224
           WTES +ALQ QLQHIN+KVFRYNLIVPFGRQMFGLKWEKEMDRLVE
Sbjct: 181 WTESSEALQVQLQHINDKVFRYNLIVPFGRQMFGLKWEKEMDRLVE 221

[Close]

BLAST of IVF0027007 vs. TAIR 10
Match: AT5G03560.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 261.5 bits (667), Expect = 6.0e-70
Identity = 134/197 (68.02%), Postives = 153/197 (77.66%), Query Frame = 0


Query: 28  AFSGSSRRWASSSSSSTTSPPGKSQKTEKNLVDRLSSVIDAVNDRKLPPELRGQRNSVRS 87
           AF  SS  W SS    T S    S++ EK   +R S+VIDAV+DRKLPPELRG+R+ VRS
Sbjct: 49  AFYSSSSSWWSSPDDLTAS----SKRKEKKTTERFSAVIDAVHDRKLPPELRGRRDFVRS 108

Query: 88  ETDLINVVERRIWNSMEEGQFENLPGKGKPLNLSINPHADPAEDTLYRILSKNGCAPEWI 147
           ETD+INVVE+RIW+SMEEG FENLPGKGKPLNL  NPHADPAEDTLYRIL+KNG APEW+
Sbjct: 109 ETDIINVVEQRIWHSMEEGHFENLPGKGKPLNLHTNPHADPAEDTLYRILNKNGFAPEWV 168

Query: 148 ELNKEIRSNISEWRSSLKKAFESRGNGDHSIWTESKKALQAQLQHINNKVFRYNLIVPFG 207
           ELNKEIR+   EWR SLKKA+  +   D S W E    L+ +L+ INN VFRYNLIVPFG
Sbjct: 169 ELNKEIRNKAKEWRVSLKKAWTMKLEEDQSGWEERSDLLKNELKQINNMVFRYNLIVPFG 228

Query: 208 RQMFGLKWEKEMDRLVE 225
           RQMFGLKWEKE+DRL E
Sbjct: 229 RQMFGLKWEKEIDRLKE 241

[Close]

BLAST of IVF0027007 vs. TAIR 10
Match: AT5G03560.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 53.5 bits (127), Expect = 2.5e-07
Identity = 33/61 (54.10%), Postives = 41/61 (67.21%), Query Frame = 0


Query: 28  AFSGSSRRWASSSSSSTTSPPGKSQKTEKNLVDRLSSVIDAVNDRKLPPELRGQRNSVRS 87
           AF  SS  W SS    T S    S++ EK   +R S+VIDAV+DRKLPPELRG+R+ VRS
Sbjct: 49  AFYSSSSSWWSSPDDLTAS----SKRKEKKTTERFSAVIDAVHDRKLPPELRGRRDFVRS 105

Query: 88  E 89
           +
Sbjct: 109 K 105

The following BLAST results are available for this feature:

BLAST of IVF0027007 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VCE1	7.8e-14	36.50	DnaJ homolog subfamily C member 28 OS=Mus musculus OX=10090 GN=Dnajc28 PE=1 SV=2	[more]
Q9NX36	7.3e-12	35.82	DnaJ homolog subfamily C member 28 OS=Homo sapiens OX=9606 GN=DNAJC28 PE=1 SV=2	[more]
P36677	2.5e-04	38.60	Uncharacterized protein YhdN OS=Escherichia coli (strain K12) OX=83333 GN=yhdN P...	[more]

BLAST of IVF0027007 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B761	9.0e-122	100.00	dnaJ homolog subfamily C member 28 OS=Cucumis melo OX=3656 GN=LOC103486543 PE=4 ...	[more]
A0A0A0LGF4	2.2e-112	92.86	DUF1992 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G746580 PE=...	[more]
A0A5A7TQ49	1.3e-104	100.00	DnaJ-like protein subfamily C member 28 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A6J1FNC7	1.5e-97	83.77	dnaJ homolog subfamily C member 28-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1KSG4	2.9e-96	82.82	dnaJ homolog subfamily C member 28-like OS=Cucurbita maxima OX=3661 GN=LOC111498...	[more]

BLAST of IVF0027007 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442765.1	3.52e-159	100.00	PREDICTED: dnaJ homolog subfamily C member 28 [Cucumis melo]	[more]
XP_004137995.3	4.41e-146	92.86	uncharacterized protein LOC101220350 isoform X1 [Cucumis sativus]	[more]
KAA0043947.1	1.51e-136	100.00	dnaJ-like protein subfamily C member 28 [Cucumis melo var. makuwa] >TYK25193.1 d...	[more]
KAE8651062.1	6.27e-134	87.50	hypothetical protein Csa_000899 [Cucumis sativus]	[more]
XP_038904150.1	1.95e-128	84.07	dnaJ homolog subfamily C member 28 [Benincasa hispida]	[more]

BLAST of IVF0027007 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03560.1	6.0e-70	68.02	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G03560.2	2.5e-07	54.10	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018961	DnaJ homologue, subfamily C, member 28, conserved domain	PFAM	PF09350	DUF1992	coord: 95..158 e-value: 3.0E-22 score: 78.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..53
None	No IPR available	PANTHER	PTHR39158	OS08G0560600 PROTEIN	coord: 1..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0027007.1	IVF0027007.1	mRNA