IVF0026882 (gene) Melon (IVF77) v1

Overview


Name	IVF0026882
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Reverse transcriptase
Location	chr12: 4154446 .. 4164439 (+)
RNA-Seq Expression	IVF0026882
Synteny	IVF0026882

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGCTAGTAAGCTACCTAACCAGGGTTCTTGGGGCATCTTGGCTAGCGTAGTAGACACAAGAGAGCCTGAAGTTTTCTTATCATTTGAATCGATGGTAAGGGTATTCCCTGATGATTTTTCTAATGAGCTTTTAGAATTTCCGCCTCACAAAGAGATTGATTTTGCTATTGATTTAGAGCCAGGTACTGTTCCCATATCAAGAGCTCCATATAGAATGGCCTTAGCCGAGCTGAAGGTTCAGTTACAGAAATTGCAGGACAAGGGTTTCATTCGATCTAGTGTGTCACCTTGGGGAGCACCAATATTGTTTGCAAAGAAGAAAGATGGGGCGATGCGCCTTTACATTGATTATAGAGAGCTTAATAAGGTGACAGTAAAGAACAGATATCCGCTACTCAGAATCGATAATTTGTTTGATCAGTTACAAGGAGCCACTGTATTATCTAAGATTGACTTACGTACAAGCTATCACCAGTTGAGAATTAGAGACAATGGTATTCCTAAGGCTGCTTTTCGTTACACATATGGGCATTACGAGTTTATTATAATGTCTTTTGGTTTGACAAATGTGCTGTTGTATTTATGGATATGATGAACAGGGTGTTTAAGGATTTCTTAGACACTTTTGTGATAGTTTTTATTGATGATATCTTGGTTTACTCCAAGACAGAGGTTGAGCATGAGGAGCATTTGCATCAAGTTTTAGAGACCCTTCGAGCCAATAAACTATATGCTAAGTTTTCTAAGTGTGTTTTCTGGCTGAATAAGGTGTCTTTTCTTGGCCATGTAGTATCTAGTGAAGGAGTTTCTGTAGACCAAGCAAACATTAAAATTGTTACCAGTTGACCTCGACCTTCTACAGTTAGTAAAGTTCATAGTTTTCTGGGTTTAGCAAGTTATTATTGAAGGTTTGTGGAAGATTTCTCTCGTATAGCCAGTCCTTTAACTCAGTTGACTAGAAAAGAGACTCCTTTTGTTTGGAGCTCAGCATATGAGAGCAGTTTCTAGGATCTTAAGCAGAAGCTTGTTACCGCACTAGTCCTTACAGTACCAGATGGATCTGGAAGCGTTGTGATTTACAGTGACGCCTTTTAGAAAGGACTAGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTTGCTTATGTCTCTCATCAGTTGAAGAGTCATGAGTAGAACTACCCTACCCATAATTTAGAGTTGGCAGCAGTGGTTTTTGCACTGAAGATATATGAAGACACTACTTGTATGGTGAGAAGATACATATCTTTACTGACCATAAGAACCTGAAATACTTCTTCACTCAGAAGGAGTTAAACATGAGATACAGAGAAGATGACTTGAGTTAGTAAAGGACTATGACTGTGAGATTTTGTACCACCCAGGTAAGGTGAATGTGGTAGTTGATGCTCTTACACTAGAAGAAATATGCTCTTTGATGTCACTTGGAAAAATGAAAATGGATCTTTAATGTCGCTTTAAAAAATGTGGATGTTTAATGTCGGTTTTAAACCGACATCAAAGAGGAAGGATTAATCTCGGTTTAAAACCGACATTAAAGACCTGCTTTTTTTAAACCGACATTGAAAGTAATAATTTAAATGTTGTCTCCCTCCTCACTTGTTTTTTAGGGTTCATATATATGGTAACAGATGAAGAAATGAAAGAGTTCCCTCTCACATATCACTACTGTCTCTTTTACATCTACAAACCCTATTCATCTTCTATCTCCATGTCCACGAAACCCACTTGAATGGCTGCGTGAACCACGACTGATGACCATTGCATGGAAGAATAAACAAAAACTCCATTAGTTTTTTCTCAATCGAATCATGCAACTCAAATCCTTGATCTGGTTGAAGTTGAGTTCGATTTCTGAAAAGCGGTGGCGCTATGCGATCGATCCTGTAGCAGAATGATGATGCGGCGGTGCTCAAATTGCAGCCACAATGGTCACAACTCTCAAACTTTTTCGAATTGCATTGTGAAGCTCTTTGGAGTTTGATTAACCAACAGTTCCATCCGAATTCTGAGCATTGTGCTGCGGATGACGAAAATGCATTGAAGGAATTCGTTCCTAGCTCTTCTTCTAGTTGCCATGAGAGGAAGCAAGGTTTGGGAATTATTACTGTTACTTATTCGTCTTTGACAATGAGCTACTTGATTTATTCTACTCTAGAATCTCTTTTTTTATCCTTAAGGAACAATAAGTTATTTCTCTAGGTTTTGCCCTTAAGATGATGATTACCTTAGACGTTATCTGGAGACTGAAGAGCTATCTTTGTCAATTCTTAAGCAAGCTTTGAAAAATTTAATCCACCTTTCGTGGCTTTTTCCTTTTATTAAAGAGACATGGGTATTTTATATGAAAATCGTCTGCTTAATAGTTCAAAGCTTAAAAATTTGTGTTTTATAGAGCAGGTGATTGCAACTACACAGAATCTTGAAAATCTTTTCTTATAGCAATTTTTCCGAAGTAGCTTTAGGATTACTTGATATCCTGCAAGAGGTAGCGAGATGGAAGAGCCTGTATGCTATGTTAGATTCATCTTGAGTTTTAAATATAATGGATATAGAGGATTCGTCGAGGACATTTTTATTGGCTCATGTTTGAAAAGTAAATGCAGATTTTCTAACTCAGAAATGCCTAATTTCATAATAGATATGTCATGCTATTTTAAAATTTTAAGATTTTAAAATCTGAAAAATGAAGAACACATAATTCACATCTATCAATGAGGTTTGAGATTTCTCCCTTTCTTATATCTTTTTTATATGCATCTAAAATTACTAGTAGCTAATCAACATGGCAGACTAAATTAAGGTTATTTCACTGTATTTAGATCTCCCTAATTTACATTTGTGTCCTTATAATTTGTACTTTCATTTTTCTTTTCTTTCAATTTATAATCTCATTCACTCTCGAGTTCATGATTGAAATTTGTATTTTGCTTGAAATTTTGCAGCCAAAGATTGACTGTTAAAGAAAGTCTTTAGCCAGAGATCATACCTATTACAAGCAAGAAAGTATCTGGCAAGGTCTATAATACCATCTTGTTGAATTTACTCATAGGCGTCTAGTAAAGGACCTGAATGTTCTCCCACATTGTTTTATGATATGAAGATGCTTACTTGGCTTTATTATATTTTGTTGTTGGCTTCTTTTATTTATTTATTTACTTTTTTTATCTTTGTTTTATAGATACTGTGATATGTGTGGGAAAGTGAAGAATTCTTACAATTTCTCTCAAGATCCTAATTTTGTTAGATCTATTCAAATTATTCTGTTGTGTGAGAAAGGACATTAAATAAAGGTTTATTTATTTCATTGATGTTTCTTCATCTTTAACTTGCAAGATTGCTTTAGAGAGAAATTTTACATGGGATGCAATGCAAAGTTTGTTCAAGTTGTACTTTGAGCCTTCTTCAATCATCATTTTGTCTTTCATTGAGAGTCTGAGATAAGTACGTGTCCATTATTTTTAAGACTTGTCCTCAGTTGTAAAATTTCAGAAATGATAATCATGACATTCTTGTTTCAGTGTAGATTTTGATCGCAATATGACGAATTCTTGCTAGTGCGGGTATCTCACATTGTATCAAGGTTTTTTAGGTTAGCTCGGTAAGGATTTAACGTTTATTCATTGGAAAACGAAGTGTTTGGTATTAATAGCTAAGGAGATAGATGTGATATAATAATCTGTCAATTAAATACAGAAGATGGTGATACTATGATTTCCTATTTTCAATATTCATTTCACATTTACTATAGGAATTATTTTCTGCTAGCCATTGGCCCATTTGTTTTTTTAGAAAGTTAAATTTTCTTTCATTCATTTGGTAAAATCTATTTGTAAAAGTAAGAGTCAATCTACGGAAATGTTAACATCTCTGGAGCTGCTAAGGAAATTCCATTCTAAAAATCTTGGAATTGGAAACTTATGTAACTTTTTGAATGGGTTGATGAAACTTTATTCCCTATGTACATGGATTTAAAAATGTGAGTTGTTTGAAAGCACAAAAGTTATTCAAGGCTTAAGTATGAGGCCGAACTTTTCTTGTGAGGTGTGCAATGGAAAATGTAGGTAACTTTTATATATACACTAAAATATATTATTATATTAGTAAGATCAGGAATGTGTTAAAAGTAGTTTTTAGGAGATCATCGAGAGGAATGAACCTTTCACTTATGAGTTCGATGCATTTTTTTCATTTTTTCAAACAAAAGTTAAATAGTTCTTATCCATTGATCTTGGATTCCTGAACTGTAGAGTTAAATAGGCAATTCTGTTTTAAGCTTTAATTGTTGAAGTCTTACTTGTCCTGCAAATGTTGTATTGCCTTTGGTTCATTTTGAGAAATTTGGGACAGACATTGTTGACAGTTGAATTTGCACACACCGCTATAAATTAACACTTGATGCCTTTTATTCTTTCTCTGCTGTATGGATTCTATTGCTACCATTGTCTTGTTGTTGTATTATTTGCTGCAAACCTATATGTTTCAACTACGTTTATACCTATTGAAAAAGATTTGTACATCACATATACCTTTCAGAATTTAGGGTGGATGATTTCAAGTTCCTGACCGAATAACTTGCTGCAAGAAAAAGTATAGTAGCTGAACAATCCAATACTAAAGTTTCTAGTATGGGTGGGTGGACTAAACTTTTCAAAGGCCATAAAAGCTCATATAGGAATTTTGAAACTATTTAATATTGAAGTTTCTAGTATGGTTGCTGCTGGACAATGTTGCATGGCATTTAGTACACTTGTCTTTGTTGGAGACTCCATGTTGTGGTATTCTTCTTATTCTTGGAATTTTGAAACTATTTAAGAGTACATCACCTCTATTCATATTGCTTTTATGTTCATGTTTTTATGGGTAAAGTTGAGTTCTTTTTCATTTGGAGTCATACTATTTTGAATTCATACAATGCTGTTTGTATCTTGAATGTTGTCAACTTCTTTCAATTTGTAAGCAATTGCATATACTTTTAATGTTTAGGAAAATTCTGAGGCAGCTAAAATTGTTGATATTTATAAGTCTAAATTATGAAGTTTTCTTTTGGGAAACTTCATAACTAATATTCTCTTCTCCCAATTATTAATTTATGTTGTAAGTAATTTTTAGCATTGTGCTCTGGAAGTGAGCTCATGTTTTAGCTCAAAATTAATCTTTTTAATGTATATGGTTGATCGAACAATTATGTAGAAAAGCAGCTTGTAGCAAAATTGGTATTGGGTCATCTTCTCCTTGCAGGTTTGTATTATTTAAAACTTTAATCAATACCCCCATTTGTTATTTGATTATTGAAATAGTCTTTTGTGAATCATACTAATGTTTAGAACAGTGTTTTCACTATAATGCAAATCAATGATTGGGAGAATAGTCAAATTGCTACAAGCACTATAATGATAATCTTCATAAAAGATTGATGTTTTTGGGTTTGGCATATTGGTTCTTGAACTTTTGACAGGGCAAAAAGCACTTGATGTTGACAATGGTCAAATTCGAAAGGGAATGATCCTCGAATGGGTATGTCTCTTTCTTATGATGTGTTGTTTGCTTATCATTTGGTACTTTTATTAAACTTACTATTTGTATTACTCTCTTCTTGTAATAACTTTTCATAATGTTCCTTTGTTTCACATTCTATTGTTATATTATAGAAATAAGCTTTTTTATTCTCACAGCGATGAAGATTTGAGTAAGTTTCATATTTTTGTCTGTTTTATGTTTCTTTAATTGGCATTGCAAATTTATTGCAGTTGCATTATCTTTTGTTTTCTTTTTCTACGTAATTGAAGATTTGAGTAAGTATGATTTACTCATCAATGTGTGGAAGGGAAATCTTATTTATGGGAGATTTCTATTTAATCTCTTGTCTTATTATTGGTAATAATTGCAAGCTACACAACAAGTTTGACATAAATCCTTACATTTCAACAACTTTGGTCTCCAATACGAGGAATTGATGACTTGGTTGCAAGTAATTTATTTTGGATGTTTGTCTTGATTTTTGGCGGGTATTCTTCTAGAATTAATTTGAAAGTTTATAATAAATCTGGATTGAATTTTGGTTTTCTTGTCAAAACATTACGGTTCTCAGAATTGGAGTTTGATTTGCAAAATTTCATTTTGTTTTTGCAACCATCTTTTAAGTTTATGAATATCAAGCAGTTTCAGAGGTGAGTTCATGTTTGTTATTGTTGTTGTTGTGAGACGGTGGAGTGGTGATATTTCTTTATCTGTGGAGGAGAATATCCTTTGGCTTGTGTTTATTTTGATTTTTTTATTTTATTATTGAATTGAGTTTGTAGTTTCTAAAGAAATATGAGAAAAACCGTTCAGACATGGCTTGTTTGGTAGTTTTGAAGATGAACTCTGTAAGCTGTTGTCTGATTATTTGACCCATTCTTGTATTACAGGCTTCGTGAATTGAAACAGCTTGGTGAATACTTTTGTATGTTTATTCATTTTTGTGAATGATGTTCTATATTTAATTGTTAGTCCTTGAATTTGAGGTCGCTACATTCACAAATATGAATATGTATTTAGGAGGTGTGCATATGATACTTTTAGGCTAGCTACTTAAAATCAGAAATTGGCATTTAGTCAAATATTGCTGAGGATTTCCTGATTATAATCAGATTTTTAAGTTAATAAACTGGTATTATTGATAGAAGCTTGTGCTTCACTCGTTGTTTGGTTTGGAGTCTAGACTGAACTTTTTCTCGACAGTTTGACAGTAAGGTTTAGCTGAAGTTTTGTAGGTACAAAATTTATATTCAACGTATTCTATTAGTTTCATGTGCTTACAATCAAGTTTGTATACTTTCAGGTGTGACACATATGGTATGGAGGTAAGGATAGAGAATATTGATTTTAATCGGGTTGGTCTAGTGATCAAAATAGTAATTTATTTCTAGAGTAACCTCTTTGTTTCACAAGGGAACAAGCTAAAGGTGATATCCAAAATTATTTTTGATGAAACATAAGATTAATTTGTATTCAATTTATATACATGCAGTGTCCTCGTCAATTGGATTATGTAGAGTGTGGGTACTACGTGCAAAATTACATACATGAGATAGTGCATAATTCTAGTACTTCTATTACTAGCCTTGTAAGTTTCTACTTTAACTTTTTACATATTACAATTTATGATCTAAACTCATACTTTCCATATCTTTCTCTTTGTGCGTAGTTCAATACCAAAAGTGCATATAGGCAAGAGGAGATTGACGAGATTCGAACCAAATGGGCAGCTTTTGTTAGTAGATTTGTGTAAGCTTTTGAATGTTTTTTTTTTTTTGGTCCAGTTAAGTTAGTAGTTGATTTCTGTAGTTAAGTTAGTAGTTGGTCGAGTTAAGTTAAGTTTTTTAGGGTCGGGCAGTCCTATAGTTTTTTTAAGGACAGGTGGTCTCGTACTAATTGTTGTTTGTTAGATAGTTTGTACGTATACTTTAGTTAGTGGAGGAACTTTCTATTGTACATATACATTGGTTATTAATCACGATCTTATATATTATCTTTATATTTTTGAGTTTTCACTTATAGTTGTTGGTTGTTGTTTAAATATGTGATTATATATAGGAGTTGGATGATTGTATTTGTTGTAGTACTATATAGAAGGGTGGAAAGGTGCTCATATTTTATGTGTTGGATGATCGTATTTGCTGTAGTACTATATGGAAGTGTGGAAAAGTTTGCTAGTATTTTAGTGTTAGATCTTATGTTATTGGTTTGCCATGGAGGGCAACATGTGTTGTTTGATATGTGTGATTATATATATAGGTGGATATATTGGAAGATTTGGAGTAGTTGGACTTATGGTATTGAATATAGTTGTGTTTATTGATATGTGATTATATGTAGGTGTTGGATGATGTGTATTTGTTGTAGTTCTATATGGAAGTGTATGCTAGAATTTCAGGTATTCTTGTGTGCATTGCAGGTGAACTAGTTATAAGGTTTACCATTGAGTAGTAGGCATTTTATAGCCAGCGTGCAAGCAATTTTTTTACTTTTTACAATATACGATGACGAACATTTCCGGACGTAGTTCAAGCCAAATAATGTCGGTTTTGCCATCATAAAAACTAGTGTAAGTACGACATTAAATGTATCTTTAATGTCGGTTTTAAAAACGACATTAAAGACATCTTTAATGTCGGTTAAAAAAAATTAAAGACATCTTTAATGTCAGTGGAAAAACGACATTAAAGATCTCTTATAAGTGACATTAAAGATCTCTTATAAGTGACATTAAAGATATCTTTAATGTCGGTTATCCACCGACATTAAAGATCAACCGACATTAAAGGCCTTCAATAACATCTTTGAAGGTGTTGGTTTATAACCGACATTGAAGGCCTTTAATGTCAGTTTGTAACCGACATTAAAGATGAAGCCCAACCGACATTAAAGACCTTTAATAACGCTCGCAAAGATGTCGGTCGCCAAGTGACATTAAAGACCTTTAATGTCGATTTTAAGCCGACATTAAAGGCCAGATTTCTTGTAGTGTTATTAGGAAGATATCACATTTAGCAGCACTTATTACTGAGCAAATTCCCTTGCATAGAGACTTTGAGAGAGCTGGAAGTCACCTTACAGTTGGCTCAATTGTCGGTGCAACCAACTTTGAGACAGAGGATTATTGTTGCCCAGTTTAATTATCCATATTTGGTTTAGAAGCGTCGCCTAAAAGAAGCAGGGCAAACTGAGGAGTTCTCCACATCCTCTAATGATGGACTTATGTTTGAGAGACAGTTATACGTGTCAGCATACAATATAGTTAAGATTGAGCTTTTGACTAAGGCACATAGTTCCCCATTTTCTATGCATCATGGCAGTACAAAGATGTACCAGAACTTGAAGCGAGTTTACTGGTGGCAAAATATGAAGAGAGAAGTGGCAGACTTCGTTAGTAGATGTTTGGTCTACCAGCAGGTTTGTTACAACCCTTGAATGTGCTAGAGTGGAACTGGGAGAACGTGTCTACAGACTTCATCATAGGACTGCCTAGGACCCTAAAGTCTTATACGGTGATTTGGGTTGTTGTTAACAGGCTCACGAAGTCCGCCCATTTCATTGCAAGGAAATCCACTTATACTGCCAGTAAGTGGGTACAGTTATGTATGACTGAGATAGTGAGACTATATGGGGTGCTTGTATCAATTGTTTCTGATAGAGATGCTCGTTTCACTTCAAAGTTTTGGAAAGGACTTTAGATTGCCTTGGGCACGAGATTAGATTTCAGCACAACCTTTCATCCTCAGACCGATGGTCAAATAGAGCATTTGAATCAAATTTTAGAGGATATGCTATGGTCTTGTGTTCTAGAGTTTACAGGGAGTTAGGACTCCCATTTGCATTTCATGGAGTTCGCTTATAATAACAATTATAAGGCTACCATTCATTCGAAGCTTTGTATAGTAGGTGCTGTATATCTTTTATGTGTTGGGGTGAGGTTGGTAAGCGAAGAATGTTAGGTCCTGAGCTAGTTCAAACCACCAATAAAGCTATACAGAAGATTAGAGCTCGTATGTTGACAGCACAGAGCAAACAGAAGAGTTACTCTGATGAACGGTGTAAGGATCTCGAGTTTAACATAGGAGACATGGTTTTTCTAAAGGTAGCACCTACAAAAGGTGTTTTGAGATTTGAGAAGAAGGGAAAAGCTAAGTCCACGTTTTGTAGGACCATTTGAGGTACTTGAACAGATCGGCCCCGTAGTTTATCATTTGGCGTTGCCTCCGTCATTTTCTATAGTTCATGATGTATTCTATGTCTCTATGTTAAGTAAGTATATAGCAAACCCGATGCATATAGTTGACTTTGAACCATTGCAAATTAATGAAAATTTGAGCTATGAGGAGCAACTCGTTGAGATTTTGGTAAGAGAGGTCAAACTGCTCCGTAATAGAGGAATTTCATTGGTTAAAGTTCTTTGGCGAAACCACAAAGCTGATGAGGCCACATAG

mRNA sequence

ATGAAAGCTAGTAAGCTACCTAACCAGGGTTCTTGGGGCATCTTGGCTAGCGTAGTAGACACAAGAGAGCCTGAAGTTTTCTTATCATTTGAATCGATGGTAAGGGTATTCCCTGATGATTTTTCTAATGAGCTTTTAGAATTTCCGCCTCACAAAGAGATTGATTTTGCTATTGATTTAGAGCCAGGTACTGTTCCCATATCAAGAGCTCCATATAGAATGGCCTTAGCCGAGCTGAAGGTTCAGTTACAGAAATTGCAGGACAAGGGTTTCATTCGATCTAGTGTGTCACCTTGGGGAGCACCAATATTGTTTGCAAAGAAGAAAGATGGGGCGATGCGCCTTTACATTGATTATAGAGAGCTTAATAAGGTGACAGTAAAGAACAGATATCCGCTACTCAGAATCGATAATTTGTTTGATCAGTTACAAGGAGCCACTGTATTATCTAAGATTGACTTACGTACAAGCTATCACCAGTTGAGAATTAGAGACAATGGTATTCCTAAGGCTGCTTTTCGTTACACATATGGGCATTACGAGTTTATTATAATGGTGTTTAAGGATTTCTTAGACACTTTTGTGATAGTTTTTATTGATGATATCTTGGTTTACTCCAAGACAGAGGTTGAGCATGAGGAGCATTTGCATCAAGTTTTAGAGACCCTTCGAGCCAATAAACTATATGCTAAGTTTTCTAAGTGTGTTTTCTGGCTGAATAAGAATGATGATGCGGCGGTGCTCAAATTGCAGCCACAATGGTCACAACTCTCAAACTTTTTCGAATTGCATTGTGAAGCTCTTTGGAGTTTGATTAACCAACAGTTCCATCCGAATTCTGAGCATTGTGCTGCGGATGACGAAAATGCATTGAAGGAATTCGTTCCTAGCTCTTCTTCTAGTTGCCATGAGAGGAAGCAAGGGCAAAAAGCACTTGATGTTGACAATGGTCAAATTCGAAAGGGAATGATCCTCGAATGGTTCAATACCAAAAGTGCATATAGGCAAGAGGAGATTGACGAGATTCGAACCAAATGGGCAGCTTTTAAGCGTCGCCTAAAAGAAGCAGGGCAAACTGAGGAGTTCTCCACATCCTCTAATGATGGACTTATGTTTGAGAGACAGTTATACGTGTCAGCATACAATATAGTTAAGATTGAGCTTTTGACTAAGGCACATAGTTCCCCATTTTCTATGCATCATGGCAGTACAAAGATGTACCAGAACTTGAAGCGAGTTTACTGGTGGCAAAATATGAAGAGAGAAGTGGCAGACTTCGTTAGTAGATGTTTGGTCTACCAGCAGGTTGGTAAGCGAAGAATGTTAGGTCCTGAGCTAGTTCAAACCACCAATAAAGCTATACAGAAGATTAGAGCTCGTATGTTGACAGCACAGAGCAAACAGAAGAGTTACTCTGATGAACGGTGTAAGGATCTCGAGTTTAACATAGGAGACATGGTTTTTCTAAAGGTAGCACCTACAAAAGGTGTTTTGAGATTTGAGAAGAAGGGAAAAGCTAAGTCCACTAAGTATATAGCAAACCCGATGCATATAGTTGACTTTGAACCATTGCAAATTAATGAAAATTTGAGCTATGAGGAGCAACTCGTTGAGATTTTGGTAAGAGAGGTCAAACTGCTCCGTAATAGAGGAATTTCATTGGTTAAAGTTCTTTGGCGAAACCACAAAGCTGATGAGGCCACATAG

Coding sequence (CDS)

ATGAAAGCTAGTAAGCTACCTAACCAGGGTTCTTGGGGCATCTTGGCTAGCGTAGTAGACACAAGAGAGCCTGAAGTTTTCTTATCATTTGAATCGATGGTAAGGGTATTCCCTGATGATTTTTCTAATGAGCTTTTAGAATTTCCGCCTCACAAAGAGATTGATTTTGCTATTGATTTAGAGCCAGGTACTGTTCCCATATCAAGAGCTCCATATAGAATGGCCTTAGCCGAGCTGAAGGTTCAGTTACAGAAATTGCAGGACAAGGGTTTCATTCGATCTAGTGTGTCACCTTGGGGAGCACCAATATTGTTTGCAAAGAAGAAAGATGGGGCGATGCGCCTTTACATTGATTATAGAGAGCTTAATAAGGTGACAGTAAAGAACAGATATCCGCTACTCAGAATCGATAATTTGTTTGATCAGTTACAAGGAGCCACTGTATTATCTAAGATTGACTTACGTACAAGCTATCACCAGTTGAGAATTAGAGACAATGGTATTCCTAAGGCTGCTTTTCGTTACACATATGGGCATTACGAGTTTATTATAATGGTGTTTAAGGATTTCTTAGACACTTTTGTGATAGTTTTTATTGATGATATCTTGGTTTACTCCAAGACAGAGGTTGAGCATGAGGAGCATTTGCATCAAGTTTTAGAGACCCTTCGAGCCAATAAACTATATGCTAAGTTTTCTAAGTGTGTTTTCTGGCTGAATAAGAATGATGATGCGGCGGTGCTCAAATTGCAGCCACAATGGTCACAACTCTCAAACTTTTTCGAATTGCATTGTGAAGCTCTTTGGAGTTTGATTAACCAACAGTTCCATCCGAATTCTGAGCATTGTGCTGCGGATGACGAAAATGCATTGAAGGAATTCGTTCCTAGCTCTTCTTCTAGTTGCCATGAGAGGAAGCAAGGGCAAAAAGCACTTGATGTTGACAATGGTCAAATTCGAAAGGGAATGATCCTCGAATGGTTCAATACCAAAAGTGCATATAGGCAAGAGGAGATTGACGAGATTCGAACCAAATGGGCAGCTTTTAAGCGTCGCCTAAAAGAAGCAGGGCAAACTGAGGAGTTCTCCACATCCTCTAATGATGGACTTATGTTTGAGAGACAGTTATACGTGTCAGCATACAATATAGTTAAGATTGAGCTTTTGACTAAGGCACATAGTTCCCCATTTTCTATGCATCATGGCAGTACAAAGATGTACCAGAACTTGAAGCGAGTTTACTGGTGGCAAAATATGAAGAGAGAAGTGGCAGACTTCGTTAGTAGATGTTTGGTCTACCAGCAGGTTGGTAAGCGAAGAATGTTAGGTCCTGAGCTAGTTCAAACCACCAATAAAGCTATACAGAAGATTAGAGCTCGTATGTTGACAGCACAGAGCAAACAGAAGAGTTACTCTGATGAACGGTGTAAGGATCTCGAGTTTAACATAGGAGACATGGTTTTTCTAAAGGTAGCACCTACAAAAGGTGTTTTGAGATTTGAGAAGAAGGGAAAAGCTAAGTCCACTAAGTATATAGCAAACCCGATGCATATAGTTGACTTTGAACCATTGCAAATTAATGAAAATTTGAGCTATGAGGAGCAACTCGTTGAGATTTTGGTAAGAGAGGTCAAACTGCTCCGTAATAGAGGAATTTCATTGGTTAAAGTTCTTTGGCGAAACCACAAAGCTGATGAGGCCACATAG

Protein sequence

MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDLEPGTVPISRAPYRMALAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHYEFIIMVFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLNKNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNSEHCAADDENALKEFVPSSSSSCHERKQGQKALDVDNGQIRKGMILEWFNTKSAYRQEEIDEIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQLYVSAYNIVKIELLTKAHSSPFSMHHGSTKMYQNLKRVYWWQNMKREVADFVSRCLVYQQVGKRRMLGPELVQTTNKAIQKIRARMLTAQSKQKSYSDERCKDLEFNIGDMVFLKVAPTKGVLRFEKKGKAKSTKYIANPMHIVDFEPLQINENLSYEEQLVEILVREVKLLRNRGISLVKVLWRNHKADEAT

Homology

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BLAST of IVF0026882 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 122.5 bits (306), Expect = 1.6e-26
Identity = 92/309 (29.77%), Postives = 144/309 (46.60%), Query Frame = 0


Query: 58  IDLEPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMR 117
           I+++PG       PY +      E+   +QKL D  FI  S SP  +P++   KKDG  R
Sbjct: 588 IEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFR 647

Query: 118 LYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFR 177
           L +DYR LNK T+ + +PL RIDNL  ++  A + + +DL + YHQ+ +      K AF 
Sbjct: 648 LCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFV 707

Query: 178 YTYGHYEFIIMVF----------KDFLDT-----FVIVFIDDILVYSKTEVEHEEHLHQV 237
              G YE+ +M F          +   DT     FV V++DDIL++S++  EH +HL  V
Sbjct: 708 TPSGKYEYTVMPFGLVNAPSTFARYMADTFRDLRFVNVYLDDILIFSESPEEHWKHLDTV 767

Query: 238 LETLRANKLYAKFSKCVFWLNKND----DAAVLKLQPQWSQLSNFFEL-------HCEAL 297
           LE L+   L  K  KC F   + +       + K+ P   + +   +          +  
Sbjct: 768 LERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRF 827

Query: 298 WSLIN--QQFHPNSEHCAADDENALKEFVPSSSSSCHERKQGQKALDVDNGQIRKGMILE 336
             +IN  ++F PN    A      ++ F+   S    ++    KA+D     +    +L 
Sbjct: 828 LGMINYYRRFIPNCSKIA----QPIQLFICDKSQWTEKQ---DKAIDKLKDALCNSPVLV 887

[Close]

BLAST of IVF0026882 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 2.0e-26
Identity = 73/198 (36.87%), Postives = 105/198 (53.03%), Query Frame = 0


Query: 58  IDLEPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMR 117
           I+++PG       PY +      E+   +QKL D  FI  S SP  +P++   KKDG  R
Sbjct: 614 IEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFR 673

Query: 118 LYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFR 177
           L +DYR LNK T+ + +PL RIDNL  ++  A + + +DL + YHQ+ +      K AF 
Sbjct: 674 LCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFV 733

Query: 178 YTYGHYEFIIMVF----------KDFLDT-----FVIVFIDDILVYSKTEVEHEEHLHQV 237
              G YE+ +M F          +   DT     FV V++DDIL++S++  EH +HL  V
Sbjct: 734 TPSGKYEYTVMPFGLVNAPSTFARYMADTFRDLRFVNVYLDDILIFSESPEEHWKHLDTV 793

[Close]

BLAST of IVF0026882 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.5e-24
Identity = 67/208 (32.21%), Postives = 115/208 (55.29%), Query Frame = 0


Query: 50  PHKEIDFAIDL--EPGTVPISRAPYRMA-LAELKVQLQKLQDKGFIRSSVSPWGAPILFA 109
           P K ++F ++L  E   +PI   P     +  +  ++ +    G IR S +    P++F 
Sbjct: 396 PIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFV 455

Query: 110 KKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDN 169
            KK+G +R+ +DY+ LNK    N YPL  I+ L  ++QG+T+ +K+DL+++YH +R+R  
Sbjct: 456 PKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKG 515

Query: 170 GIPKAAFRYTYGHYEFIIMV---------FKDFLDTF--------VIVFIDDILVYSKTE 229
              K AFR   G +E+++M          F+ F++T         V+ ++DDIL++SK+E
Sbjct: 516 DEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSE 575

Query: 230 VEHEEHLHQVLETLRANKLYAKFSKCVF 238
            EH +H+  VL+ L+   L    +KC F
Sbjct: 576 SEHVKHVKDVLQKLKNANLIINQAKCEF 603

[Close]

BLAST of IVF0026882 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.5e-24
Identity = 67/208 (32.21%), Postives = 115/208 (55.29%), Query Frame = 0


Query: 50  PHKEIDFAIDL--EPGTVPISRAPYRMA-LAELKVQLQKLQDKGFIRSSVSPWGAPILFA 109
           P K ++F ++L  E   +PI   P     +  +  ++ +    G IR S +    P++F 
Sbjct: 396 PIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFV 455

Query: 110 KKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDN 169
            KK+G +R+ +DY+ LNK    N YPL  I+ L  ++QG+T+ +K+DL+++YH +R+R  
Sbjct: 456 PKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKG 515

Query: 170 GIPKAAFRYTYGHYEFIIMV---------FKDFLDTF--------VIVFIDDILVYSKTE 229
              K AFR   G +E+++M          F+ F++T         V+ ++DDIL++SK+E
Sbjct: 516 DEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSE 575

Query: 230 VEHEEHLHQVLETLRANKLYAKFSKCVF 238
            EH +H+  VL+ L+   L    +KC F
Sbjct: 576 SEHVKHVKDVLQKLKNANLIINQAKCEF 603

[Close]

BLAST of IVF0026882 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.5e-24
Identity = 67/208 (32.21%), Postives = 115/208 (55.29%), Query Frame = 0


Query: 50  PHKEIDFAIDL--EPGTVPISRAPYRMA-LAELKVQLQKLQDKGFIRSSVSPWGAPILFA 109
           P K ++F ++L  E   +PI   P     +  +  ++ +    G IR S +    P++F 
Sbjct: 396 PIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFV 455

Query: 110 KKKDGAMRLYIDYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDN 169
            KK+G +R+ +DY+ LNK    N YPL  I+ L  ++QG+T+ +K+DL+++YH +R+R  
Sbjct: 456 PKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKG 515

Query: 170 GIPKAAFRYTYGHYEFIIMV---------FKDFLDTF--------VIVFIDDILVYSKTE 229
              K AFR   G +E+++M          F+ F++T         V+ ++DDIL++SK+E
Sbjct: 516 DEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSE 575

Query: 230 VEHEEHLHQVLETLRANKLYAKFSKCVF 238
            EH +H+  VL+ L+   L    +KC F
Sbjct: 576 SEHVKHVKDVLQKLKNANLIINQAKCEF 603

[Close]

BLAST of IVF0026882 vs. ExPASy TrEMBL
Match: A0A5D3BWB9 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001850 PE=4 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 5.9e-162
Identity = 366/810 (45.19%), Postives = 435/810 (53.70%), Query Frame = 0


Query: 1   MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDL 60
           MKASKL +QG+WGILASVVDTR PEV LS E +V+ +PD F +EL   PP +EIDFAI+L
Sbjct: 1   MKASKLLSQGTWGILASVVDTRGPEVSLSSEPVVKEYPDVFPDELPGLPPPREIDFAIEL 60

Query: 61  EPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYI 120
           EP T PISRAPYRMA   L E+KVQLQ+L DKGFIR SVSPWGAP+LF KKKD +MRL I
Sbjct: 61  EPNTAPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRLCI 120

Query: 121 DYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTY 180
           DYRELNKVTVKNRYPL RID+LFDQLQGATV SKIDLR+SYHQLRIRD+ IPK AFR  Y
Sbjct: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSSYHQLRIRDSDIPKTAFRSRY 180

Query: 181 GHYEFIIM-----------------VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVL 240
           GHYEFI+M                 VFKDFLD+F IVFIDDIL+YSK E EHEEHL QVL
Sbjct: 181 GHYEFIVMSFGLTNAPAVFMDLMKRVFKDFLDSFFIVFIDDILIYSKIEAEHEEHLRQVL 240

Query: 241 ETLRANKLYAKFSKCVFWLNKNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNS 300
           ETLRAN+LYAKF+KC FWL K   + V K++        +    CE+ +  + Q+     
Sbjct: 241 ETLRANRLYAKFTKCEFWLKKPRSSTVSKIRSFLGLAGYYRSPACESSFQELKQKLVTAP 300

Query: 301 EHCAAD--------------------------------------------DENALKEFVP 360
                D                                            D  + K F  
Sbjct: 301 VLTVPDGSRSFVIYSDASKKVLGCVLIQQVVFALKIWRHYLYGENIQIFTDHKSPKYFFT 360

Query: 361 SSSSSCHERKQGQKALDVDNGQI----RKGMILEWFNTKSAY----------------RQ 420
               +  +R+  +   D D   +    +  ++ +  + K A+                R 
Sbjct: 361 QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDFERA 420

Query: 421 E---EIDEIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQLYVSAYNIVKIELLTKAH 480
           E    + E+   +   KR L E GQ+E+FS SS+DGL FE +LYV   + VK ELLT+AH
Sbjct: 421 EIAVSVGELNDAYLVEKRCLVETGQSEDFSISSDDGLTFEGRLYVPEDSAVKTELLTEAH 480

Query: 481 SSPFSMHHGSTKMYQNLKRVYWWQNMKREVADFVSRCLVYQQ------------------ 540
           SSPF+MH GST MYQ+L+ VYWW+NMKREVADFV+RCLV QQ                  
Sbjct: 481 SSPFTMHPGSTTMYQDLRSVYWWRNMKREVADFVNRCLVCQQVKALRQRPVGLLQPLSVP 540

Query: 541 ------------------------------------------------------------ 569
                                                                       
Sbjct: 541 GWKWESVSMDFITELPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTARLQLALGMRLDFS 600

[Close]

BLAST of IVF0026882 vs. ExPASy TrEMBL
Match: A0A5A7V2M6 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold348G00430 PE=4 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 6.6e-161
Identity = 366/819 (44.69%), Postives = 435/819 (53.11%), Query Frame = 0


Query: 1   MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDL 60
           MKASKL +QG+WGILASVVDTR PEV LS E +V+ +PD F +EL   PP +EIDFAI+L
Sbjct: 1   MKASKLLSQGTWGILASVVDTRGPEVSLSSEPVVKEYPDVFPDELPGLPPPREIDFAIEL 60

Query: 61  EPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYI 120
           EP T PISRAPYRMA   L E+KVQLQ+L DKGFIR SVSPWGAP+LF KKKD +MRL I
Sbjct: 61  EPNTAPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRLCI 120

Query: 121 DYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTY 180
           DYRELNKVTVKNRYPL RID+LFDQLQGATV SKIDLR+SYHQLRIRD+ IPK AFR  Y
Sbjct: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSSYHQLRIRDSDIPKTAFRSRY 180

Query: 181 GHYEFIIM-----------------VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVL 240
           GHYEFI+M                 VFKDFLD+F IVFIDDIL+YSK E EHEEHL QVL
Sbjct: 181 GHYEFIVMSFGLTNAPAVFMDLMKRVFKDFLDSFFIVFIDDILIYSKIEAEHEEHLRQVL 240

Query: 241 ETLRANKLYAKFSKCVFWLNKNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNS 300
           ETLRAN+LYAKF+KC FWL K   + V K++        +    CE+ +  + Q+     
Sbjct: 241 ETLRANRLYAKFTKCEFWLKKPRSSTVSKIRSFLGLAGYYRSPACESSFQELKQKLVTAP 300

Query: 301 EHCAAD--------------------------------------------DENALKEFVP 360
                D                                            D  + K F  
Sbjct: 301 VLTVPDGSRSFVIYSDASKKVLGCVLIQQVVFALKIWRHYLYGENIQIFTDHKSPKYFFT 360

Query: 361 SSSSSCHERKQGQKALDVDNGQI----RKGMILEWFNTKSAY----------------RQ 420
               +  +R+  +   D D   +    +  ++ +  + K A+                R 
Sbjct: 361 QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDFERA 420

Query: 421 E---EIDEIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQLYVSAYNIVKIELLTKAH 480
           E    + E+   +   KR L E GQ+E+FS SS+DGL FE +LYV   + VK ELLT+AH
Sbjct: 421 EIAVSVGELNDAYLVEKRCLVETGQSEDFSISSDDGLTFEGRLYVPEDSAVKTELLTEAH 480

Query: 481 SSPFSMHHGSTKMYQNLKRVYWWQNMKREVADFVSRCLVYQQ------------------ 540
           SSPF+MH GST MYQ+L+ VYWW+NMKREVADFV+RCLV QQ                  
Sbjct: 481 SSPFTMHPGSTTMYQDLRSVYWWRNMKREVADFVNRCLVCQQVKALRQRPVGLLQPLSVP 540

Query: 541 ------------------------------------------------------------ 569
                                                                       
Sbjct: 541 GWKWESVSMDFITELPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTARLQLALGMRLDFS 600

[Close]

BLAST of IVF0026882 vs. ExPASy TrEMBL
Match: A0A5D3BEN0 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00240 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 2.1e-159
Identity = 374/823 (45.44%), Postives = 436/823 (52.98%), Query Frame = 0


Query: 1    MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDL 60
            MKASKL +QG+WGILASVVDTREPEV LS E +VR +PD F +EL   PP +EIDF I+L
Sbjct: 415  MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPGLPPPREIDFTIEL 474

Query: 61   EPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYI 120
            EPGT PISR  YRMA   L ELKVQL+KL DKGFIR SVSPWGAP+LF KKKDG+MRL I
Sbjct: 475  EPGTAPISRVSYRMAPAELKELKVQLEKLLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 534

Query: 121  DYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTY 180
            DYRELNKVTVKNRYPL RID+LFDQLQGATV SKIDLR+ YHQLRIRD+ IPK AFR  Y
Sbjct: 535  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRY 594

Query: 181  GHYEFIIM-----------------VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVL 240
            GHYEFI++                 VFKDFLD+FVIVFIDDIL+YSKTE +HEEHLHQVL
Sbjct: 595  GHYEFIVVSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLHQVL 654

Query: 241  ETLRANKLYAKFSKCVFWLNKND-------------DAAVLKLQPQW------SQLSNFF 300
            ETL+AN+LYAKFSKC FWLNK               +   ++    W      S++ +F 
Sbjct: 655  ETLQANRLYAKFSKCEFWLNKVTFLGHVVSSEGVFVNPTKIEAVTNWPRPSTVSEICSFL 714

Query: 301  EL--------------------------------HCEALWSLINQQFHPNSEHCAADDEN 360
             L                                 CE+ +  + Q+          D   
Sbjct: 715  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSG 774

Query: 361  ALKEFVPSS--SSSCHERKQGQKALDVDNGQIRKGMILEWFNTKSA-----YRQEEI--- 420
            +   +  +S     C   +QG KA  V +   RK        TK A     + + EI   
Sbjct: 775  SFVIYSDASIKGLGCVLMQQG-KANVVADALSRKVAHSAALITKQAPLLRDFERAEIAVS 834

Query: 421  -----------------------DEIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQL 480
                                    ++   +   K RL E GQ E+FS SS+DGL FE +L
Sbjct: 835  VGEVTSQLAHLSVQPTLRKRIIVAQLNDPYLVEKHRLVETGQGEDFSISSDDGLTFEGRL 894

Query: 481  YVSAYNIVKIELLTKAHSSPFSMHHGSTKMYQNLKRVYWWQNMKREVADFVSRCLVYQQ- 540
             V   + VK ELLT+AHSSPF+MH  STK+YQ+L+ VYWW+NMKREV DFVSRCLV QQ 
Sbjct: 895  CVPEDSAVKTELLTEAHSSPFTMHPRSTKIYQDLRSVYWWRNMKREVEDFVSRCLVCQQV 954

Query: 541  ------------------------------------------------------------ 569
                                                                        
Sbjct: 955  KAPRQQPAGLLQPLSVPGWKWESVSMDFITGLPKILKGYTVIWVVVDRLTKSAHFVPGKS 1014

[Close]

BLAST of IVF0026882 vs. ExPASy TrEMBL
Match: A0A5A7T758 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold278G001050 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 2.1e-159
Identity = 374/823 (45.44%), Postives = 436/823 (52.98%), Query Frame = 0


Query: 1    MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDL 60
            MKASKL +QG+WGILASVVDTREPEV LS E +VR +PD F +EL   PP +EIDF I+L
Sbjct: 415  MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPGLPPPREIDFTIEL 474

Query: 61   EPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYI 120
            EPGT PISR  YRMA   L ELKVQL+KL DKGFIR SVSPWGAP+LF KKKDG+MRL I
Sbjct: 475  EPGTAPISRVSYRMAPAELKELKVQLEKLLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 534

Query: 121  DYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTY 180
            DYRELNKVTVKNRYPL RID+LFDQLQGATV SKIDLR+ YHQLRIRD+ IPK AFR  Y
Sbjct: 535  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRY 594

Query: 181  GHYEFIIM-----------------VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVL 240
            GHYEFI++                 VFKDFLD+FVIVFIDDIL+YSKTE +HEEHLHQVL
Sbjct: 595  GHYEFIVVSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLHQVL 654

Query: 241  ETLRANKLYAKFSKCVFWLNKND-------------DAAVLKLQPQW------SQLSNFF 300
            ETL+AN+LYAKFSKC FWLNK               +   ++    W      S++ +F 
Sbjct: 655  ETLQANRLYAKFSKCEFWLNKVTFLGHVVSSEGVFVNPTKIEAVTNWPRPSTVSEICSFL 714

Query: 301  EL--------------------------------HCEALWSLINQQFHPNSEHCAADDEN 360
             L                                 CE+ +  + Q+          D   
Sbjct: 715  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSG 774

Query: 361  ALKEFVPSS--SSSCHERKQGQKALDVDNGQIRKGMILEWFNTKSA-----YRQEEI--- 420
            +   +  +S     C   +QG KA  V +   RK        TK A     + + EI   
Sbjct: 775  SFVIYSDASIKGLGCVLMQQG-KANVVADALSRKVAHSAALITKQAPLLRDFERAEIAVS 834

Query: 421  -----------------------DEIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQL 480
                                    ++   +   K RL E GQ E+FS SS+DGL FE +L
Sbjct: 835  VGEVTSQLAHLSVQPTLRKRIIVAQLNDPYLVEKHRLVETGQGEDFSISSDDGLTFEGRL 894

Query: 481  YVSAYNIVKIELLTKAHSSPFSMHHGSTKMYQNLKRVYWWQNMKREVADFVSRCLVYQQ- 540
             V   + VK ELLT+AHSSPF+MH  STK+YQ+L+ VYWW+NMKREV DFVSRCLV QQ 
Sbjct: 895  CVPEDSAVKTELLTEAHSSPFTMHPRSTKIYQDLRSVYWWRNMKREVEDFVSRCLVCQQV 954

Query: 541  ------------------------------------------------------------ 569
                                                                        
Sbjct: 955  KAPRQQPAGLLQPLSVPGWKWESVSMDFITGLPKILKGYTVIWVVVDRLTKSAHFVPGKS 1014

[Close]

BLAST of IVF0026882 vs. ExPASy TrEMBL
Match: A0A5A7UTC6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold778G00070 PE=4 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 1.1e-155
Identity = 283/308 (91.88%), Postives = 283/308 (91.88%), Query Frame = 0


Query: 1   MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDL 60
           MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDL
Sbjct: 1   MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDL 60

Query: 61  EPGTVPISRAPYRMALAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYIDYR 120
           EPGTVPISRAPYRMALAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYIDYR
Sbjct: 61  EPGTVPISRAPYRMALAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYIDYR 120

Query: 121 ELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHY 180
           ELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQ                    
Sbjct: 121 ELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQ-------------------- 180

Query: 181 EFIIMVFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLN 240
                VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLN
Sbjct: 181 -----VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLN 240

Query: 241 KNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNSEHCAADDENALKEFVPSSSS 300
           KNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNSEHCAADDENALKEFVPSSSS
Sbjct: 241 KNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNSEHCAADDENALKEFVPSSSS 283

Query: 301 SCHERKQG 309
           SCHERKQG
Sbjct: 301 SCHERKQG 283

[Close]

BLAST of IVF0026882 vs. NCBI nr
Match: TYK03797.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 581 bits (1498), Expect = 1.36e-196
Identity = 366/810 (45.19%), Postives = 435/810 (53.70%), Query Frame = 0


Query: 1   MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDL 60
           MKASKL +QG+WGILASVVDTR PEV LS E +V+ +PD F +EL   PP +EIDFAI+L
Sbjct: 1   MKASKLLSQGTWGILASVVDTRGPEVSLSSEPVVKEYPDVFPDELPGLPPPREIDFAIEL 60

Query: 61  EPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYI 120
           EP T PISRAPYRMA   L E+KVQLQ+L DKGFIR SVSPWGAP+LF KKKD +MRL I
Sbjct: 61  EPNTAPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRLCI 120

Query: 121 DYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTY 180
           DYRELNKVTVKNRYPL RID+LFDQLQGATV SKIDLR+SYHQLRIRD+ IPK AFR  Y
Sbjct: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSSYHQLRIRDSDIPKTAFRSRY 180

Query: 181 GHYEFIIM-----------------VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVL 240
           GHYEFI+M                 VFKDFLD+F IVFIDDIL+YSK E EHEEHL QVL
Sbjct: 181 GHYEFIVMSFGLTNAPAVFMDLMKRVFKDFLDSFFIVFIDDILIYSKIEAEHEEHLRQVL 240

Query: 241 ETLRANKLYAKFSKCVFWLNKNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNS 300
           ETLRAN+LYAKF+KC FWL K   + V K++        +    CE+ +  + Q+     
Sbjct: 241 ETLRANRLYAKFTKCEFWLKKPRSSTVSKIRSFLGLAGYYRSPACESSFQELKQKLVTAP 300

Query: 301 EHCAAD--------------------------------------------DENALKEFVP 360
                D                                            D  + K F  
Sbjct: 301 VLTVPDGSRSFVIYSDASKKVLGCVLIQQVVFALKIWRHYLYGENIQIFTDHKSPKYFFT 360

Query: 361 SSSSSCHERKQGQKALDVDNGQI----RKGMILEWFNTKSAY----------------RQ 420
               +  +R+  +   D D   +    +  ++ +  + K A+                R 
Sbjct: 361 QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDFERA 420

Query: 421 E---EIDEIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQLYVSAYNIVKIELLTKAH 480
           E    + E+   +   KR L E GQ+E+FS SS+DGL FE +LYV   + VK ELLT+AH
Sbjct: 421 EIAVSVGELNDAYLVEKRCLVETGQSEDFSISSDDGLTFEGRLYVPEDSAVKTELLTEAH 480

Query: 481 SSPFSMHHGSTKMYQNLKRVYWWQNMKREVADFVSRCLVYQQV----------------- 540
           SSPF+MH GST MYQ+L+ VYWW+NMKREVADFV+RCLV QQV                 
Sbjct: 481 SSPFTMHPGSTTMYQDLRSVYWWRNMKREVADFVNRCLVCQQVKALRQRPVGLLQPLSVP 540

Query: 541 ------------------------------------------------------------ 568
                                                                       
Sbjct: 541 GWKWESVSMDFITELPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTARLQLALGMRLDFS 600

[Close]

BLAST of IVF0026882 vs. NCBI nr
Match: KAA0056751.1 (Retrotransposon protein [Cucumis melo var. makuwa] >TYK21015.1 Retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 559 bits (1441), Expect = 1.18e-195
Identity = 283/308 (91.88%), Postives = 283/308 (91.88%), Query Frame = 0


Query: 1   MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDL 60
           MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDL
Sbjct: 1   MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDL 60

Query: 61  EPGTVPISRAPYRMALAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYIDYR 120
           EPGTVPISRAPYRMALAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYIDYR
Sbjct: 61  EPGTVPISRAPYRMALAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYIDYR 120

Query: 121 ELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTYGHY 180
           ELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQ                    
Sbjct: 121 ELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQ-------------------- 180

Query: 181 EFIIMVFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLN 240
                VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLN
Sbjct: 181 -----VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVLETLRANKLYAKFSKCVFWLN 240

Query: 241 KNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNSEHCAADDENALKEFVPSSSS 300
           KNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNSEHCAADDENALKEFVPSSSS
Sbjct: 241 KNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNSEHCAADDENALKEFVPSSSS 283

Query: 301 SCHERKQG 308
           SCHERKQG
Sbjct: 301 SCHERKQG 283

[Close]

BLAST of IVF0026882 vs. NCBI nr
Match: KAA0061127.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 578 bits (1489), Expect = 4.08e-195
Identity = 366/819 (44.69%), Postives = 435/819 (53.11%), Query Frame = 0


Query: 1   MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDL 60
           MKASKL +QG+WGILASVVDTR PEV LS E +V+ +PD F +EL   PP +EIDFAI+L
Sbjct: 1   MKASKLLSQGTWGILASVVDTRGPEVSLSSEPVVKEYPDVFPDELPGLPPPREIDFAIEL 60

Query: 61  EPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYI 120
           EP T PISRAPYRMA   L E+KVQLQ+L DKGFIR SVSPWGAP+LF KKKD +MRL I
Sbjct: 61  EPNTAPISRAPYRMAPTELKEMKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDESMRLCI 120

Query: 121 DYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTY 180
           DYRELNKVTVKNRYPL RID+LFDQLQGATV SKIDLR+SYHQLRIRD+ IPK AFR  Y
Sbjct: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSSYHQLRIRDSDIPKTAFRSRY 180

Query: 181 GHYEFIIM-----------------VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVL 240
           GHYEFI+M                 VFKDFLD+F IVFIDDIL+YSK E EHEEHL QVL
Sbjct: 181 GHYEFIVMSFGLTNAPAVFMDLMKRVFKDFLDSFFIVFIDDILIYSKIEAEHEEHLRQVL 240

Query: 241 ETLRANKLYAKFSKCVFWLNKNDDAAVLKLQPQWSQLSNFFELHCEALWSLINQQFHPNS 300
           ETLRAN+LYAKF+KC FWL K   + V K++        +    CE+ +  + Q+     
Sbjct: 241 ETLRANRLYAKFTKCEFWLKKPRSSTVSKIRSFLGLAGYYRSPACESSFQELKQKLVTAP 300

Query: 301 EHCAAD--------------------------------------------DENALKEFVP 360
                D                                            D  + K F  
Sbjct: 301 VLTVPDGSRSFVIYSDASKKVLGCVLIQQVVFALKIWRHYLYGENIQIFTDHKSPKYFFT 360

Query: 361 SSSSSCHERKQGQKALDVDNGQI----RKGMILEWFNTKSAY----------------RQ 420
               +  +R+  +   D D   +    +  ++ +  + K A+                R 
Sbjct: 361 QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQAPLLRDFERA 420

Query: 421 E---EIDEIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQLYVSAYNIVKIELLTKAH 480
           E    + E+   +   KR L E GQ+E+FS SS+DGL FE +LYV   + VK ELLT+AH
Sbjct: 421 EIAVSVGELNDAYLVEKRCLVETGQSEDFSISSDDGLTFEGRLYVPEDSAVKTELLTEAH 480

Query: 481 SSPFSMHHGSTKMYQNLKRVYWWQNMKREVADFVSRCLVYQQV----------------- 540
           SSPF+MH GST MYQ+L+ VYWW+NMKREVADFV+RCLV QQV                 
Sbjct: 481 SSPFTMHPGSTTMYQDLRSVYWWRNMKREVADFVNRCLVCQQVKALRQRPVGLLQPLSVP 540

Query: 541 ------------------------------------------------------------ 568
                                                                       
Sbjct: 541 GWKWESVSMDFITELPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTARLQLALGMRLDFS 600

[Close]

BLAST of IVF0026882 vs. NCBI nr
Match: KAA0037397.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 573 bits (1476), Expect = 3.63e-188
Identity = 374/823 (45.44%), Postives = 436/823 (52.98%), Query Frame = 0


Query: 1    MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDL 60
            MKASKL +QG+WGILASVVDTREPEV LS E +VR +PD F +EL   PP +EIDF I+L
Sbjct: 415  MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPGLPPPREIDFTIEL 474

Query: 61   EPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYI 120
            EPGT PISR  YRMA   L ELKVQL+KL DKGFIR SVSPWGAP+LF KKKDG+MRL I
Sbjct: 475  EPGTAPISRVSYRMAPAELKELKVQLEKLLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 534

Query: 121  DYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTY 180
            DYRELNKVTVKNRYPL RID+LFDQLQGATV SKIDLR+ YHQLRIRD+ IPK AFR  Y
Sbjct: 535  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRY 594

Query: 181  GHYEFIIM-----------------VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVL 240
            GHYEFI++                 VFKDFLD+FVIVFIDDIL+YSKTE +HEEHLHQVL
Sbjct: 595  GHYEFIVVSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLHQVL 654

Query: 241  ETLRANKLYAKFSKCVFWLNKND-------------DAAVLKLQPQW------SQLSNFF 300
            ETL+AN+LYAKFSKC FWLNK               +   ++    W      S++ +F 
Sbjct: 655  ETLQANRLYAKFSKCEFWLNKVTFLGHVVSSEGVFVNPTKIEAVTNWPRPSTVSEICSFL 714

Query: 301  ELH--------------------------------CEALWSLINQQFHPNSEHCAADDEN 360
             L                                 CE+ +  + Q+          D   
Sbjct: 715  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSG 774

Query: 361  ALKEFVPSSSSS--CHERKQGQKALDVDNGQIRKGMILEWFNTKSA-----YRQEEID-- 420
            +   +  +S     C   +QG KA  V +   RK        TK A     + + EI   
Sbjct: 775  SFVIYSDASIKGLGCVLMQQG-KANVVADALSRKVAHSAALITKQAPLLRDFERAEIAVS 834

Query: 421  ------------------------EIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQL 480
                                    ++   +   K RL E GQ E+FS SS+DGL FE +L
Sbjct: 835  VGEVTSQLAHLSVQPTLRKRIIVAQLNDPYLVEKHRLVETGQGEDFSISSDDGLTFEGRL 894

Query: 481  YVSAYNIVKIELLTKAHSSPFSMHHGSTKMYQNLKRVYWWQNMKREVADFVSRCLVYQQV 540
             V   + VK ELLT+AHSSPF+MH  STK+YQ+L+ VYWW+NMKREV DFVSRCLV QQV
Sbjct: 895  CVPEDSAVKTELLTEAHSSPFTMHPRSTKIYQDLRSVYWWRNMKREVEDFVSRCLVCQQV 954

Query: 541  ------------------------------------------------------------ 568
                                                                        
Sbjct: 955  KAPRQQPAGLLQPLSVPGWKWESVSMDFITGLPKILKGYTVIWVVVDRLTKSAHFVPGKS 1014

[Close]

BLAST of IVF0026882 vs. NCBI nr
Match: TYJ97514.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 573 bits (1476), Expect = 3.63e-188
Identity = 374/823 (45.44%), Postives = 436/823 (52.98%), Query Frame = 0


Query: 1    MKASKLPNQGSWGILASVVDTREPEVFLSFESMVRVFPDDFSNELLEFPPHKEIDFAIDL 60
            MKASKL +QG+WGILASVVDTREPEV LS E +VR +PD F +EL   PP +EIDF I+L
Sbjct: 415  MKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDELPGLPPPREIDFTIEL 474

Query: 61   EPGTVPISRAPYRMA---LAELKVQLQKLQDKGFIRSSVSPWGAPILFAKKKDGAMRLYI 120
            EPGT PISR  YRMA   L ELKVQL+KL DKGFIR SVSPWGAP+LF KKKDG+MRL I
Sbjct: 475  EPGTAPISRVSYRMAPAELKELKVQLEKLLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 534

Query: 121  DYRELNKVTVKNRYPLLRIDNLFDQLQGATVLSKIDLRTSYHQLRIRDNGIPKAAFRYTY 180
            DYRELNKVTVKNRYPL RID+LFDQLQGATV SKIDLR+ YHQLRIRD+ IPK AFR  Y
Sbjct: 535  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRY 594

Query: 181  GHYEFIIM-----------------VFKDFLDTFVIVFIDDILVYSKTEVEHEEHLHQVL 240
            GHYEFI++                 VFKDFLD+FVIVFIDDIL+YSKTE +HEEHLHQVL
Sbjct: 595  GHYEFIVVSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAKHEEHLHQVL 654

Query: 241  ETLRANKLYAKFSKCVFWLNKND-------------DAAVLKLQPQW------SQLSNFF 300
            ETL+AN+LYAKFSKC FWLNK               +   ++    W      S++ +F 
Sbjct: 655  ETLQANRLYAKFSKCEFWLNKVTFLGHVVSSEGVFVNPTKIEAVTNWPRPSTVSEICSFL 714

Query: 301  ELH--------------------------------CEALWSLINQQFHPNSEHCAADDEN 360
             L                                 CE+ +  + Q+          D   
Sbjct: 715  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSG 774

Query: 361  ALKEFVPSSSSS--CHERKQGQKALDVDNGQIRKGMILEWFNTKSA-----YRQEEID-- 420
            +   +  +S     C   +QG KA  V +   RK        TK A     + + EI   
Sbjct: 775  SFVIYSDASIKGLGCVLMQQG-KANVVADALSRKVAHSAALITKQAPLLRDFERAEIAVS 834

Query: 421  ------------------------EIRTKWAAFKRRLKEAGQTEEFSTSSNDGLMFERQL 480
                                    ++   +   K RL E GQ E+FS SS+DGL FE +L
Sbjct: 835  VGEVTSQLAHLSVQPTLRKRIIVAQLNDPYLVEKHRLVETGQGEDFSISSDDGLTFEGRL 894

Query: 481  YVSAYNIVKIELLTKAHSSPFSMHHGSTKMYQNLKRVYWWQNMKREVADFVSRCLVYQQV 540
             V   + VK ELLT+AHSSPF+MH  STK+YQ+L+ VYWW+NMKREV DFVSRCLV QQV
Sbjct: 895  CVPEDSAVKTELLTEAHSSPFTMHPRSTKIYQDLRSVYWWRNMKREVEDFVSRCLVCQQV 954

Query: 541  ------------------------------------------------------------ 568
                                                                        
Sbjct: 955  KAPRQQPAGLLQPLSVPGWKWESVSMDFITGLPKILKGYTVIWVVVDRLTKSAHFVPGKS 1014

The following BLAST results are available for this feature:

BLAST of IVF0026882 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	1.6e-26	29.77	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	2.0e-26	36.87	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P0CT41	1.5e-24	32.21	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.5e-24	32.21	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.5e-24	32.21	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of IVF0026882 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BWB9	5.9e-162	45.19	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001850 P...	[more]
A0A5A7V2M6	6.6e-161	44.69	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold348G00430 PE...	[more]
A0A5D3BEN0	2.1e-159	45.44	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7T758	2.1e-159	45.44	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7UTC6	1.1e-155	91.88	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of IVF0026882 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK03797.1	1.36e-196	45.19	pol protein [Cucumis melo var. makuwa]	[more]
KAA0056751.1	1.18e-195	91.88	Retrotransposon protein [Cucumis melo var. makuwa] >TYK21015.1 Retrotransposon p...	[more]
KAA0061127.1	4.08e-195	44.69	pol protein [Cucumis melo var. makuwa]	[more]
KAA0037397.1	3.63e-188	45.44	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYJ97514.1	3.63e-188	45.44	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of IVF0026882 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 55..185 e-value: 6.8E-58 score: 197.4
None	No IPR available	GENE3D	1.10.340.70		coord: 351..436 e-value: 2.1E-13 score: 52.3
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 66..239
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 66..239
None	No IPR available	CDD	cd01647	RT_LTR	coord: 90..241 e-value: 4.08827E-60 score: 195.122
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 387..437 e-value: 2.7E-13 score: 49.8
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 188..241 e-value: 1.3E-7 score: 31.4
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 131..240 e-value: 6.8E-58 score: 197.4
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 34..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0026882.2	IVF0026882.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity