IVF0026743 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATGGGAAGTGAGGGAGAAATTTACATTGGTGGAATTGGCGGAGAGGGAAGGAAAGATCGAAGAGTTTGTAGTGACGAAAGAGGAAATGGAGATGTACGTTGATCTTCATCCATTGACGAACACTACGTCGTATACAGTAATGGAAAGTATGTCGGTGGCAAAAGCTCTGGTTCTTTTTCGGCAAGTAGGGATTCGTCATTTATTGATCGTCCCCAAATATGAAGCAGCCAGAGTAAGCTCATCATCTTCTTCTTCTTCTTCTTCTTTTACTCACTCCATCAGAATTATTTTAGTTCATGGTTGTTTGTGCAGGTTCTGTTGGTGATTGGGATTTTGACGTGGCAAGATTTAAGGTCATACAATATTTTGAGTGCAATTCCTGATTTAGAAAGGACCAAAGGCAATGAGAAACATAATTGA ATGGAATGGGAAGTGAGGGAGAAATTTACATTGGTGGAATTGGCGGAGAGGGAAGGAAAGATCGAAGAGTTTGTAGTGACGAAAGAGGAAATGGAGATGTACGTTGATCTTCATCCATTGACGAACACTACGTCGTATACAGTAATGGAAAGTATGTCGGTGGCAAAAGCTCTGGTTCTTTTTCGGCAAGTAGGGATTCGTCATTTATTGATCGTCCCCAAATATGAAGCAGCCAGAGTTCTGTTGGTGATTGGGATTTTGACGTGGCAAGATTTAAGGTCATACAATATTTTGAGTGCAATTCCTGATTTAGAAAGGACCAAAGGCAATGAGAAACATAATTGA ATGGAATGGGAAGTGAGGGAGAAATTTACATTGGTGGAATTGGCGGAGAGGGAAGGAAAGATCGAAGAGTTTGTAGTGACGAAAGAGGAAATGGAGATGTACGTTGATCTTCATCCATTGACGAACACTACGTCGTATACAGTAATGGAAAGTATGTCGGTGGCAAAAGCTCTGGTTCTTTTTCGGCAAGTAGGGATTCGTCATTTATTGATCGTCCCCAAATATGAAGCAGCCAGAGTTCTGTTGGTGATTGGGATTTTGACGTGGCAAGATTTAAGGTCATACAATATTTTGAGTGCAATTCCTGATTTAGAAAGGACCAAAGGCAATGAGAAACATAATTGA MEWEVREKFTLVELAEREGKIEEFVVTKEEMEMYVDLHPLTNTTSYTVMESMSVAKALVLFRQVGIRHLLIVPKYEAARVLLVIGILTWQDLRSYNILSAIPDLERTKGNEKHN Homology
BLAST of IVF0026743 vs. ExPASy Swiss-Prot
Match: P92942 (Chloride channel protein CLC-b OS=Arabidopsis thaliana OX=3702 GN=CLC-B PE=1 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 1.1e-35 Identity = 78/112 (69.64%), Postives = 91/112 (81.25%), Query Frame = 0
BLAST of IVF0026743 vs. ExPASy Swiss-Prot
Match: P92941 (Chloride channel protein CLC-a OS=Arabidopsis thaliana OX=3702 GN=CLC-A PE=1 SV=2) HSP 1 Score: 143.3 bits (360), Expect = 1.7e-33 Identity = 73/110 (66.36%), Postives = 89/110 (80.91%), Query Frame = 0
BLAST of IVF0026743 vs. ExPASy Swiss-Prot
Match: Q96282 (Chloride channel protein CLC-c OS=Arabidopsis thaliana OX=3702 GN=CLC-C PE=1 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 6.6e-17 Identity = 44/89 (49.44%), Postives = 64/89 (71.91%), Query Frame = 0
BLAST of IVF0026743 vs. ExPASy Swiss-Prot
Match: P60300 (Putative chloride channel-like protein CLC-g OS=Arabidopsis thaliana OX=3702 GN=CLC-G PE=1 SV=2) HSP 1 Score: 88.2 bits (217), Expect = 6.6e-17 Identity = 46/92 (50.00%), Postives = 66/92 (71.74%), Query Frame = 0
BLAST of IVF0026743 vs. ExPASy Swiss-Prot
Match: P92943 (Chloride channel protein CLC-d OS=Arabidopsis thaliana OX=3702 GN=CLC-D PE=1 SV=2) HSP 1 Score: 60.1 bits (144), Expect = 1.9e-08 Identity = 33/72 (45.83%), Postives = 47/72 (65.28%), Query Frame = 0
BLAST of IVF0026743 vs. ExPASy TrEMBL
Match: A0A5D3DLW5 (Chloride channel protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00230 PE=3 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 2.2e-44 Identity = 101/113 (89.38%), Postives = 102/113 (90.27%), Query Frame = 0
BLAST of IVF0026743 vs. ExPASy TrEMBL
Match: A0A1S3B373 (Chloride channel protein OS=Cucumis melo OX=3656 GN=LOC103485488 PE=3 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 2.2e-44 Identity = 101/113 (89.38%), Postives = 102/113 (90.27%), Query Frame = 0
BLAST of IVF0026743 vs. ExPASy TrEMBL
Match: I1Z8C8 (Chloride channel protein OS=Cucumis sativus OX=3659 GN=ClCa PE=2 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 5.5e-43 Identity = 98/113 (86.73%), Postives = 101/113 (89.38%), Query Frame = 0
BLAST of IVF0026743 vs. ExPASy TrEMBL
Match: A0A5D3DL42 (Chloride channel protein CLC-b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00210 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 4.0e-41 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of IVF0026743 vs. ExPASy TrEMBL
Match: A0A6J1JZP1 (chloride channel protein CLC-b-like OS=Cucurbita maxima OX=3661 GN=LOC111488896 PE=3 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.5e-40 Identity = 94/113 (83.19%), Postives = 97/113 (85.84%), Query Frame = 0
BLAST of IVF0026743 vs. NCBI nr
Match: KAA0056576.1 (chloride channel protein CLC-b [Cucumis melo var. makuwa] >TYK24258.1 chloride channel protein CLC-b [Cucumis melo var. makuwa]) HSP 1 Score: 174 bits (442), Expect = 6.77e-54 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of IVF0026743 vs. NCBI nr
Match: XP_008441347.1 (PREDICTED: chloride channel protein CLC-b [Cucumis melo] >KAA0056578.1 chloride channel protein CLC-b [Cucumis melo var. makuwa] >TYK24260.1 chloride channel protein CLC-b [Cucumis melo var. makuwa]) HSP 1 Score: 185 bits (470), Expect = 4.21e-52 Identity = 101/113 (89.38%), Postives = 102/113 (90.27%), Query Frame = 0
BLAST of IVF0026743 vs. NCBI nr
Match: NP_001267676.1 (chloride channel protein CLC-b-like [Cucumis sativus] >AFJ15538.1 chloride channel a [Cucumis sativus] >KGN63173.1 hypothetical protein Csa_021818 [Cucumis sativus]) HSP 1 Score: 181 bits (458), Expect = 2.04e-50 Identity = 98/113 (86.73%), Postives = 101/113 (89.38%), Query Frame = 0
BLAST of IVF0026743 vs. NCBI nr
Match: XP_038885188.1 (chloride channel protein CLC-b isoform X2 [Benincasa hispida]) HSP 1 Score: 179 bits (455), Expect = 5.39e-50 Identity = 98/113 (86.73%), Postives = 100/113 (88.50%), Query Frame = 0
BLAST of IVF0026743 vs. NCBI nr
Match: KAG7033355.1 (Chloride channel protein CLC-b, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 171 bits (433), Expect = 4.90e-49 Identity = 94/113 (83.19%), Postives = 97/113 (85.84%), Query Frame = 0
BLAST of IVF0026743 vs. TAIR 10
Match: AT3G27170.1 (chloride channel B ) HSP 1 Score: 150.6 bits (379), Expect = 7.6e-37 Identity = 78/112 (69.64%), Postives = 91/112 (81.25%), Query Frame = 0
BLAST of IVF0026743 vs. TAIR 10
Match: AT5G40890.1 (chloride channel A ) HSP 1 Score: 143.3 bits (360), Expect = 1.2e-34 Identity = 73/110 (66.36%), Postives = 89/110 (80.91%), Query Frame = 0
BLAST of IVF0026743 vs. TAIR 10
Match: AT5G40890.2 (chloride channel A ) HSP 1 Score: 143.3 bits (360), Expect = 1.2e-34 Identity = 73/110 (66.36%), Postives = 89/110 (80.91%), Query Frame = 0
BLAST of IVF0026743 vs. TAIR 10
Match: AT5G49890.1 (chloride channel C ) HSP 1 Score: 88.2 bits (217), Expect = 4.7e-18 Identity = 44/89 (49.44%), Postives = 64/89 (71.91%), Query Frame = 0
BLAST of IVF0026743 vs. TAIR 10
Match: AT5G33280.1 (Voltage-gated chloride channel family protein ) HSP 1 Score: 88.2 bits (217), Expect = 4.7e-18 Identity = 46/92 (50.00%), Postives = 66/92 (71.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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