IVF0026606 (gene) Melon (IVF77) v1

Overview
NameIVF0026606
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTaxadiene 5-alpha hydroxylase-like
Locationchr03: 3982050 .. 3982385 (-)
RNA-Seq ExpressionIVF0026606
SyntenyIVF0026606
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTTGAGCATATCTCTAGCCCTGACTCCCTTATAATGAAACCAATCCAAATCTCCCCAACAAAGTCTGAGATCATTGGAGACAGTCTGGCAACTTTGGTGGATAGTGAAGAAGAATAAGGACAATGGATTGGCAAAAAGGAAATCAGTGAAGAGCTTTTCAAAAAACAACTCATCTCTTGGCTCAAAGACAACAATCTCAAACTTACTCATACTTTTAACAACAATGTCAATACCTTCAAGACCAATATGGGAACTAAAAACAATGTTGAAATAGGTTATGAGCCCTTGGGATCGAATAGTTCCCCATGTAAATACTTTCCTATAATGTAA

mRNA sequence

ATGGAAGTTGAGCATATCTCTAGCCCTGACTCCCTTATAATGAAACCAATCCAAATCTCCCCAACAAAGTCTGAGATCATTGGAGACAGACAATGGATTGGCAAAAAGGAAATCAGTGAAGAGCTTTTCAAAAAACAACTCATCTCTTGGCTCAAAGACAACAATCTCAAACTTACTCATACTTTTAACAACAATGTCAATACCTTCAAGACCAATATGGGAACTAAAAACAATGTTGAAATAGGTTATGAGCCCTTGGGATCGAATAGTTCCCCATGTAAATACTTTCCTATAATGTAA

Coding sequence (CDS)

ATGGAAGTTGAGCATATCTCTAGCCCTGACTCCCTTATAATGAAACCAATCCAAATCTCCCCAACAAAGTCTGAGATCATTGGAGACAGACAATGGATTGGCAAAAAGGAAATCAGTGAAGAGCTTTTCAAAAAACAACTCATCTCTTGGCTCAAAGACAACAATCTCAAACTTACTCATACTTTTAACAACAATGTCAATACCTTCAAGACCAATATGGGAACTAAAAACAATGTTGAAATAGGTTATGAGCCCTTGGGATCGAATAGTTCCCCATGTAAATACTTTCCTATAATGTAA

Protein sequence

MEVEHISSPDSLIMKPIQISPTKSEIIGDRQWIGKKEISEELFKKQLISWLKDNNLKLTHTFNNNVNTFKTNMGTKNNVEIGYEPLGSNSSPCKYFPIM
Homology
BLAST of IVF0026606 vs. ExPASy TrEMBL
Match: A0A5D3BHT7 (Taxadiene 5-alpha hydroxylase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00510 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.7e-24
Identity = 67/107 (62.62%), Postives = 76/107 (71.03%), Query Frame = 0

Query: 1   MEVEHISSPDSLIMKPIQISPTKSEIIGD---------------RQWIGKKEISEELFKK 60
           ME+EHISSP+S IM PIQ+SPT+SEII D                 W  K+EISEELFKK
Sbjct: 374 MEMEHISSPNSPIMTPIQVSPTQSEIIRDSLVTLVDSEEEEEQNEGWTRKREISEELFKK 433

Query: 61  QLISWLKDNNLKLTHTFNNNVNTFKTNMGTKNNVEIGYEPLGSNSSP 93
           QLI+WLKDNNLKL   F+N  +T K NM  +NNVEIGYEPLGSNSSP
Sbjct: 434 QLINWLKDNNLKLASAFDNFASTPKINMENENNVEIGYEPLGSNSSP 480

BLAST of IVF0026606 vs. ExPASy TrEMBL
Match: A0A5D3CAI5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00620 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.4e-21
Identity = 63/106 (59.43%), Postives = 74/106 (69.81%), Query Frame = 0

Query: 1   MEVEHISSPDSLIMKPIQISPTKSEIIG-------DRQ--------WIGKKEISEELFKK 60
           MEVEHISSPDS +M PIQ SP++SEII        DR+        W GKKEIS++LFKK
Sbjct: 219 MEVEHISSPDSPVMTPIQTSPSQSEIIRNSLVSLVDREEEEEQIKGWTGKKEISKDLFKK 278

Query: 61  QLISWLKDNNLKLTHTFNNNVNTFKTNMGTKNNVEIGYEPLGSNSS 92
           Q I+WLKDNNLKL   F NN ++ K NM  +NNVEIGYEP  SN+S
Sbjct: 279 QPINWLKDNNLKLAPAFENNASSSKINMENENNVEIGYEPSRSNNS 324

BLAST of IVF0026606 vs. ExPASy TrEMBL
Match: A0A5A7V6K4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00420 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.3e-19
Identity = 55/92 (59.78%), Postives = 70/92 (76.09%), Query Frame = 0

Query: 1   MEVEHISSPDSLIMKPIQISPTKSEIIGDRQWIGKKEISEELFKKQLISWLKDNNLKLTH 60
           MEV+H+SSP+S IM PIQISP++S+II +        ++E+LFKKQLI+WLKDNNLKL  
Sbjct: 278 MEVKHVSSPNSPIMTPIQISPSQSKIIKNSM------VTEDLFKKQLINWLKDNNLKLAP 337

Query: 61  TFNNNVNTFKTNMGTKNNVEIGYEPLGSNSSP 93
            F NN N+ K NM  +NNVEIGY+  GSN+SP
Sbjct: 338 AFENNANSSKINMDNENNVEIGYKLSGSNNSP 363

BLAST of IVF0026606 vs. ExPASy TrEMBL
Match: A0A5A7V4L2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold321G00310 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 6.1e-14
Identity = 46/85 (54.12%), Postives = 58/85 (68.24%), Query Frame = 0

Query: 1   MEVEHISSPDSLIMKPIQISPTKSEIIGD---------------RQWIGKKEISEELFKK 60
           +EVEH+SSPDS IM PIQISP++SEII D                 WIGK+EI+EE+FKK
Sbjct: 266 LEVEHVSSPDSPIMTPIQISPSQSEIIRDSLVSLVDSEEEKEHNEGWIGKREINEEIFKK 325

Query: 61  QLISWLKDNNLKLTHTFNNNVNTFK 71
           QLI+WL DNNLKL   ++N  ++ K
Sbjct: 326 QLINWLNDNNLKLAPAYDNKASSTK 350

BLAST of IVF0026606 vs. ExPASy TrEMBL
Match: A0A5A7THF9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4170G00120 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 8.0e-14
Identity = 41/60 (68.33%), Postives = 51/60 (85.00%), Query Frame = 0

Query: 33  IGKKEISEELFKKQLISWLKDNNLKLTHTFNNNVNTFKTNMGTKNNVEIGYEPLGSNSSP 92
           +GKK+I+EE+FKKQLI+WLKDNNLKL   F+NNV++ K N+  +NNV I YEPLGSNSSP
Sbjct: 308 LGKKDINEEIFKKQLINWLKDNNLKLAPAFDNNVSSSKINLDNENNVGIDYEPLGSNSSP 367

BLAST of IVF0026606 vs. NCBI nr
Match: TYJ97748.1 (taxadiene 5-alpha hydroxylase-like [Cucumis melo var. makuwa])

HSP 1 Score: 122 bits (307), Expect = 1.92e-30
Identity = 67/107 (62.62%), Postives = 76/107 (71.03%), Query Frame = 0

Query: 1   MEVEHISSPDSLIMKPIQISPTKSEIIGD---------------RQWIGKKEISEELFKK 60
           ME+EHISSP+S IM PIQ+SPT+SEII D                 W  K+EISEELFKK
Sbjct: 374 MEMEHISSPNSPIMTPIQVSPTQSEIIRDSLVTLVDSEEEEEQNEGWTRKREISEELFKK 433

Query: 61  QLISWLKDNNLKLTHTFNNNVNTFKTNMGTKNNVEIGYEPLGSNSSP 92
           QLI+WLKDNNLKL   F+N  +T K NM  +NNVEIGYEPLGSNSSP
Sbjct: 434 QLINWLKDNNLKLASAFDNFASTPKINMENENNVEIGYEPLGSNSSP 480

BLAST of IVF0026606 vs. NCBI nr
Match: TYK07346.1 (hypothetical protein E5676_scaffold202G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 113 bits (282), Expect = 9.75e-28
Identity = 63/106 (59.43%), Postives = 74/106 (69.81%), Query Frame = 0

Query: 1   MEVEHISSPDSLIMKPIQISPTKSEIIG-------DRQ--------WIGKKEISEELFKK 60
           MEVEHISSPDS +M PIQ SP++SEII        DR+        W GKKEIS++LFKK
Sbjct: 219 MEVEHISSPDSPVMTPIQTSPSQSEIIRNSLVSLVDREEEEEQIKGWTGKKEISKDLFKK 278

Query: 61  QLISWLKDNNLKLTHTFNNNVNTFKTNMGTKNNVEIGYEPLGSNSS 91
           Q I+WLKDNNLKL   F NN ++ K NM  +NNVEIGYEP  SN+S
Sbjct: 279 QPINWLKDNNLKLAPAFENNASSSKINMENENNVEIGYEPSRSNNS 324

BLAST of IVF0026606 vs. NCBI nr
Match: KAA0063733.1 (hypothetical protein E6C27_scaffold1290G00140 [Cucumis melo var. makuwa] >TYK10959.1 hypothetical protein E5676_scaffold107G00420 [Cucumis melo var. makuwa])

HSP 1 Score: 106 bits (264), Expect = 7.50e-25
Identity = 55/92 (59.78%), Postives = 70/92 (76.09%), Query Frame = 0

Query: 1   MEVEHISSPDSLIMKPIQISPTKSEIIGDRQWIGKKEISEELFKKQLISWLKDNNLKLTH 60
           MEV+H+SSP+S IM PIQISP++S+II +        ++E+LFKKQLI+WLKDNNLKL  
Sbjct: 278 MEVKHVSSPNSPIMTPIQISPSQSKIIKNSM------VTEDLFKKQLINWLKDNNLKLAP 337

Query: 61  TFNNNVNTFKTNMGTKNNVEIGYEPLGSNSSP 92
            F NN N+ K NM  +NNVEIGY+  GSN+SP
Sbjct: 338 AFENNANSSKINMDNENNVEIGYKLSGSNNSP 363

BLAST of IVF0026606 vs. NCBI nr
Match: KAA0062230.1 (hypothetical protein E6C27_scaffold321G00310 [Cucumis melo var. makuwa])

HSP 1 Score: 88.2 bits (217), Expect = 4.04e-18
Identity = 46/85 (54.12%), Postives = 58/85 (68.24%), Query Frame = 0

Query: 1   MEVEHISSPDSLIMKPIQISPTKSEIIGD---------------RQWIGKKEISEELFKK 60
           +EVEH+SSPDS IM PIQISP++SEII D                 WIGK+EI+EE+FKK
Sbjct: 266 LEVEHVSSPDSPIMTPIQISPSQSEIIRDSLVSLVDSEEEKEHNEGWIGKREINEEIFKK 325

Query: 61  QLISWLKDNNLKLTHTFNNNVNTFK 70
           QLI+WL DNNLKL   ++N  ++ K
Sbjct: 326 QLINWLNDNNLKLAPAYDNKASSTK 350

BLAST of IVF0026606 vs. NCBI nr
Match: KAA0040709.1 (hypothetical protein E6C27_scaffold529G00290 [Cucumis melo var. makuwa] >TYK14278.1 hypothetical protein E5676_scaffold4170G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 86.7 bits (213), Expect = 1.59e-17
Identity = 41/60 (68.33%), Postives = 51/60 (85.00%), Query Frame = 0

Query: 33  IGKKEISEELFKKQLISWLKDNNLKLTHTFNNNVNTFKTNMGTKNNVEIGYEPLGSNSSP 92
           +GKK+I+EE+FKKQLI+WLKDNNLKL   F+NNV++ K N+  +NNV I YEPLGSNSSP
Sbjct: 308 LGKKDINEEIFKKQLINWLKDNNLKLAPAFDNNVSSSKINLDNENNVGIDYEPLGSNSSP 367

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BHT71.7e-2462.62Taxadiene 5-alpha hydroxylase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A5D3CAI51.4e-2159.43Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V6K41.3e-1959.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V4L26.1e-1454.12Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7THF98.0e-1468.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
TYJ97748.11.92e-3062.62taxadiene 5-alpha hydroxylase-like [Cucumis melo var. makuwa][more]
TYK07346.19.75e-2859.43hypothetical protein E5676_scaffold202G00620 [Cucumis melo var. makuwa][more]
KAA0063733.17.50e-2559.78hypothetical protein E6C27_scaffold1290G00140 [Cucumis melo var. makuwa] >TYK109... [more]
KAA0062230.14.04e-1854.12hypothetical protein E6C27_scaffold321G00310 [Cucumis melo var. makuwa][more]
KAA0040709.11.59e-1768.33hypothetical protein E6C27_scaffold529G00290 [Cucumis melo var. makuwa] >TYK1427... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0026606.1IVF0026606.1mRNA