IVF0026574 (gene) Melon (IVF77) v1

Overview


Name	IVF0026574
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	LINE-1 retrotransposable element ORF2 protein
Location	chr05: 21491179 .. 21492138 (-)
RNA-Seq Expression	IVF0026574
Synteny	IVF0026574

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTACTTAAGCAGATTGCTGTCCCACCTGGAAACAAAAGGAGCTATCAAAGGGGTCTCTTTCAACAACTGCTGCAATATATCCCACCTCCTATTTGCGGACGATGTACTTATCTTTGTCGAAGACAATGAAAAGTACTTAAACAATTTACAGATGGCGCTCTACCTCTTTGAGAAAGCTTCTGGGCTGACTTTCAACCTTTTGAAGTCAACAATAAACCCCATTAACATATCTGCCGATAGAACGGATCAGATAGCTAGACTTTTCGGGTTTCAAACTAAATTCCTACCAGTCAACTACCTAGGAGTTCCGTTAGGAGGAAACCCAAGATCCAGATCTTTTTGGGGACAAACAATCGAATGTATCCACAAAAAACTAAACGGATGGAAATACTCACAAATTTTCAAAGGAGGAAGACTTACCCTTTTAAAAGCTTCTCTCTCGAGCCTCCCCACCTATCAGCTTTCTACTTTCAAAGCTCTTGTCTCTGTTTACAAAGAAATTGAAAAACATTGGAGAGATTTCTTGTGGGGAGGAAGTGAGGACAAACAAAATGCTCACCTGATCAATTGGAGAATTTGTACCTCCCCTAAGGAGTTGGAAGGCCTGGGAATTAGCAAGCTAAAGGACACAAACCAAGCCCTCCTATGCAAATGGCTATGGAGATACCACAATGAGTCAAACTCTCTTTGGAAAAAGTGTATAGATGCTAAATACACAAAAAACCATCAAGGCGACATACCAGTAGTAGGTAGAAATAGTAGTGCAAAATCTCCCTGGAATGCAATCAAAAAATGGAAAGACTGGTTTGAATCAAAAATCAGCTGGATTCCTAACGATGGCTCCTCCCTTTCCTTTTGGCACAGCAAATGGCAAAACAATATTCCTCTCTCCCACCAAATTCCTAGACTCTATGCTCTCTCAAATCTACAATCAGCTACTGTAAAGGAAGTTTAG

mRNA sequence

ATGGATTACTTAAGCAGATTGCTGTCCCACCTGGAAACAAAAGGAGCTATCAAAGGGGTCTCTTTCAACAACTGCTGCAATATATCCCACCTCCTATTTGCGGACGATGTACTTATCTTTGTCGAAGACAATGAAAAGTACTTAAACAATTTACAGATGGCGCTCTACCTCTTTGAGAAAGCTTCTGGGCTGACTTTCAACCTTTTGAAGTCAACAATAAACCCCATTAACATATCTGCCGATAGAACGGATCAGATAGCTAGACTTTTCGGGTTTCAAACTAAATTCCTACCAGTCAACTACCTAGGAGTTCCGTTAGGAGGAAACCCAAGATCCAGATCTTTTTGGGGACAAACAATCGAATGTATCCACAAAAAACTAAACGGATGGAAATACTCACAAATTTTCAAAGGAGGAAGACTTACCCTTTTAAAAGCTTCTCTCTCGAGCCTCCCCACCTATCAGCTTTCTACTTTCAAAGCTCTTGTCTCTGTTTACAAAGAAATTGAAAAACATTGGAGAGATTTCTTGTGGGGAGGAAGTGAGGACAAACAAAATGCTCACCTGATCAATTGGAGAATTTGTACCTCCCCTAAGGAGTTGGAAGGCCTGGGAATTAGCAAGCTAAAGGACACAAACCAAGCCCTCCTATGCAAATGGCTATGGAGATACCACAATGAGTCAAACTCTCTTTGGAAAAAGTGTATAGATGCTAAATACACAAAAAACCATCAAGGCGACATACCAGTAGTAGGTAGAAATAGTAGTGCAAAATCTCCCTGGAATGCAATCAAAAAATGGAAAGACTGGTTTGAATCAAAAATCAGCTGGATTCCTAACGATGGCTCCTCCCTTTCCTTTTGGCACAGCAAATGGCAAAACAATATTCCTCTCTCCCACCAAATTCCTAGACTCTATGCTCTCTCAAATCTACAATCAGCTACTGTAAAGGAAGTTTAG

Coding sequence (CDS)

ATGGATTACTTAAGCAGATTGCTGTCCCACCTGGAAACAAAAGGAGCTATCAAAGGGGTCTCTTTCAACAACTGCTGCAATATATCCCACCTCCTATTTGCGGACGATGTACTTATCTTTGTCGAAGACAATGAAAAGTACTTAAACAATTTACAGATGGCGCTCTACCTCTTTGAGAAAGCTTCTGGGCTGACTTTCAACCTTTTGAAGTCAACAATAAACCCCATTAACATATCTGCCGATAGAACGGATCAGATAGCTAGACTTTTCGGGTTTCAAACTAAATTCCTACCAGTCAACTACCTAGGAGTTCCGTTAGGAGGAAACCCAAGATCCAGATCTTTTTGGGGACAAACAATCGAATGTATCCACAAAAAACTAAACGGATGGAAATACTCACAAATTTTCAAAGGAGGAAGACTTACCCTTTTAAAAGCTTCTCTCTCGAGCCTCCCCACCTATCAGCTTTCTACTTTCAAAGCTCTTGTCTCTGTTTACAAAGAAATTGAAAAACATTGGAGAGATTTCTTGTGGGGAGGAAGTGAGGACAAACAAAATGCTCACCTGATCAATTGGAGAATTTGTACCTCCCCTAAGGAGTTGGAAGGCCTGGGAATTAGCAAGCTAAAGGACACAAACCAAGCCCTCCTATGCAAATGGCTATGGAGATACCACAATGAGTCAAACTCTCTTTGGAAAAAGTGTATAGATGCTAAATACACAAAAAACCATCAAGGCGACATACCAGTAGTAGGTAGAAATAGTAGTGCAAAATCTCCCTGGAATGCAATCAAAAAATGGAAAGACTGGTTTGAATCAAAAATCAGCTGGATTCCTAACGATGGCTCCTCCCTTTCCTTTTGGCACAGCAAATGGCAAAACAATATTCCTCTCTCCCACCAAATTCCTAGACTCTATGCTCTCTCAAATCTACAATCAGCTACTGTAAAGGAAGTTTAG

Protein sequence

MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVNYLGVPLGGNPRSRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKELEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSHQIPRLYALSNLQSATVKEV

Homology

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BLAST of IVF0026574 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.7e-28
Identity = 63/188 (33.51%), Postives = 97/188 (51.60%), Query Frame = 0


Query: 112 SRSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEK 171
           ++  +G+ +E +  +++GW+   +   GRLTL KA LSS+P + +ST     S+   +++
Sbjct: 9   NKDTFGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQ 68

Query: 172 HWRDFLWGGSEDKQNAHLINWRICTSPKELEGLGISKLKDTNQALLCKWLWRYHNESNSL 231
             R FLWG + +K+  HL+ W    SPK+  GLG+   K  N+AL+ K  WR   E NSL
Sbjct: 69  LSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSL 128

Query: 232 WKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIK-KWKDWFESKISWIPNDGSSLSFWHS 291
           W   +  KY      D   +    S  S W +I    +D     + WIP DG  + FW  
Sbjct: 129 WTLVLQKKYHVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTD 188

Query: 292 KWQNNIPL 299
           +W +  PL
Sbjct: 189 RWVSGKPL 196

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BLAST of IVF0026574 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.0e-07
Identity = 49/209 (23.44%), Postives = 86/209 (41.15%), Query Frame = 0


Query: 32  LFADDVLIFVEDNEKYLNNLQMALYLFEKASGLTFNLLKSTINPINISADRTDQIARLFG 91
           LFADD+++++E+      NL   +  F K SG   N+ KS     N +     QI     
Sbjct: 699 LFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYNNNRQTESQIMGELP 758

Query: 92  FQTKFLPVNYLGVPLGGNPRS--RSFWGQTIECIHKKLNGWKYSQIFKGGRLTLLKASLS 151
           F      + YLG+ L  + +   +  +   ++ I +  N WK       GR+ ++K ++ 
Sbjct: 759 FTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAIL 818

Query: 152 SLPTYQLST--FKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINWRICTSPKELEGLGIS 211
               Y+ +    K  ++ + E+EK    F+W      Q    I   I +   +  G+ + 
Sbjct: 819 PKVIYRFNAIPIKLPMTFFTELEKTTLKFIW-----NQKRARIAKSILSQKNKAGGITLP 878

Query: 212 KLKDTNQALLCK--WLWRYHNESNSLWKK 235
             K   +A + K  W W Y N     W +
Sbjct: 879 DFKLYYKATVTKTAWYW-YQNRDIDQWNR 901

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BLAST of IVF0026574 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.8e-06
Identity = 35/144 (24.31%), Postives = 64/144 (44.44%), Query Frame = 0


Query: 150 SLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINW-RICTSPKELEGLGISK 209
           +LP Y +S F+    + K++     +F W   E+K+    + W ++C S ++  GLG   
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 210 LKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWK 269
           L   NQALL K  +R  ++ ++L  + + ++Y  +       VG   S    W +I   +
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPS--YAWRSIIHGR 121

Query: 270 DWFESKISWIPNDGSSLSFWHSKW 293
           +     +     DG     W  +W
Sbjct: 122 ELLSRGLLRTIGDGIHTKVWLDRW 143

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BLAST of IVF0026574 vs. ExPASy TrEMBL
Match: A0A5D3CFY6 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00590 PE=4 SV=1)

HSP 1 Score: 674.1 bits (1738), Expect = 2.9e-190
Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 0


Query: 1   MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEK 60
           MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEK
Sbjct: 1   MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEK 60

Query: 61  ASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVNYLGVPLGGNPRSRSFWGQTI 120
           ASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVNYLGVPLGGNPRSRSFWGQTI
Sbjct: 61  ASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVNYLGVPLGGNPRSRSFWGQTI 120

Query: 121 ECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGG 180
           ECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGG
Sbjct: 121 ECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGG 180

Query: 181 SEDKQNAHLINWRICTSPKELEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY 240
           SEDKQNAHLINWRICTSPKELEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY
Sbjct: 181 SEDKQNAHLINWRICTSPKELEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY 240

Query: 241 TKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH 300
           TKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
Sbjct: 241 TKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH 300

Query: 301 QIPRLYALSNLQSATVKEV 320
           QIPRLYALSNLQSATVKEV
Sbjct: 301 QIPRLYALSNLQSATVKEV 319

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BLAST of IVF0026574 vs. ExPASy TrEMBL
Match: A0A5A7US62 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G003960 PE=4 SV=1)

HSP 1 Score: 630.2 bits (1624), Expect = 4.8e-177
Identity = 298/319 (93.42%), Postives = 305/319 (95.61%), Query Frame = 0


Query: 1    MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEK 60
            MDYLSRLLSHLE+KGAIKGVSFNNCCNISHLLFADDVLIFVEDNE+YLNNLQMAL LFEK
Sbjct: 1261 MDYLSRLLSHLESKGAIKGVSFNNCCNISHLLFADDVLIFVEDNERYLNNLQMALTLFEK 1320

Query: 61   ASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVNYLGVPLGGNPRSRSFWGQTI 120
            ASGLTFN  KSTI+PINISA RTDQIA  FGFQTKFLPVNYLGVPLGGNPRSRSFW QTI
Sbjct: 1321 ASGLTFNNSKSTISPINISAGRTDQIASFFGFQTKFLPVNYLGVPLGGNPRSRSFWDQTI 1380

Query: 121  ECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGG 180
            ECIHKKLNGWKYSQI KGGRLTLLKASLSSLPTYQLSTFKA VSVYKEIEKHWRDFLWGG
Sbjct: 1381 ECIHKKLNGWKYSQISKGGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGG 1440

Query: 181  SEDKQNAHLINWRICTSPKELEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY 240
            SEDKQNAHLINW ICTSPKEL GLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY
Sbjct: 1441 SEDKQNAHLINWNICTSPKELGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY 1500

Query: 241  TKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH 300
            TKNHQGDIPVVGRNSSA SPWNAIKKWKDW+ESKISW+PNDGSSLSFWHSKW NNIPLS 
Sbjct: 1501 TKNHQGDIPVVGRNSSANSPWNAIKKWKDWYESKISWLPNDGSSLSFWHSKWHNNIPLSL 1560

Query: 301  QIPRLYALSNLQSATVKEV 320
            QIPRLYALSN+QSATVKE+
Sbjct: 1561 QIPRLYALSNMQSATVKEI 1579

[Close]

BLAST of IVF0026574 vs. ExPASy TrEMBL
Match: A0A5A7TQA8 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G00190 PE=4 SV=1)

HSP 1 Score: 630.2 bits (1624), Expect = 4.8e-177
Identity = 298/319 (93.42%), Postives = 305/319 (95.61%), Query Frame = 0


Query: 1   MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEK 60
           MDYLSRLLSHLE+KGAIKGVSFNNCCNISHLLFADDVLIFVEDNE+YLNNLQMAL LFEK
Sbjct: 129 MDYLSRLLSHLESKGAIKGVSFNNCCNISHLLFADDVLIFVEDNERYLNNLQMALTLFEK 188

Query: 61  ASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVNYLGVPLGGNPRSRSFWGQTI 120
           ASGLTFN  KSTI+PINISA RTDQIA  FGFQTKFLPVNYLGVPLGGNPRSRSFW QTI
Sbjct: 189 ASGLTFNNSKSTISPINISAGRTDQIASFFGFQTKFLPVNYLGVPLGGNPRSRSFWDQTI 248

Query: 121 ECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGG 180
           ECIHKKLNGWKYSQI KGGRLTLLKASLSSLPTYQLSTFKA VSVYKEIEKHWRDFLWGG
Sbjct: 249 ECIHKKLNGWKYSQISKGGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGG 308

Query: 181 SEDKQNAHLINWRICTSPKELEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY 240
           SEDKQNAHLINW ICTSPKEL G+GISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY
Sbjct: 309 SEDKQNAHLINWNICTSPKELGGMGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY 368

Query: 241 TKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH 300
           TKNHQGDIPVVGRNSSA SPWNAIKKWKDW+ESKISWIPNDGSSLSFWHSKW NNIPLS 
Sbjct: 369 TKNHQGDIPVVGRNSSANSPWNAIKKWKDWYESKISWIPNDGSSLSFWHSKWHNNIPLSL 428

Query: 301 QIPRLYALSNLQSATVKEV 320
           QIPRLYALSN+QSATVKE+
Sbjct: 429 QIPRLYALSNMQSATVKEI 447

[Close]

BLAST of IVF0026574 vs. ExPASy TrEMBL
Match: A0A5D3CA17 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00050 PE=4 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 9.0e-176
Identity = 297/319 (93.10%), Postives = 304/319 (95.30%), Query Frame = 0


Query: 1    MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEK 60
            MDYLSRLLSHLE+KGAIKGVSFNN CNISHLLFADDVLIFVEDNE+YLNNLQMAL LFEK
Sbjct: 1261 MDYLSRLLSHLESKGAIKGVSFNNYCNISHLLFADDVLIFVEDNERYLNNLQMALTLFEK 1320

Query: 61   ASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVNYLGVPLGGNPRSRSFWGQTI 120
            ASGLTFN  KSTI+PINISA RTDQIA  FGFQTKFLPVNYLGVPLGGNPRSRSFW QTI
Sbjct: 1321 ASGLTFNNSKSTISPINISAGRTDQIASFFGFQTKFLPVNYLGVPLGGNPRSRSFWDQTI 1380

Query: 121  ECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGG 180
            ECIHKKLNGWKYSQI KGGRLTLLKASLSSLPTYQLSTFKA VSVYKEIEKHWRDFLWGG
Sbjct: 1381 ECIHKKLNGWKYSQISKGGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGG 1440

Query: 181  SEDKQNAHLINWRICTSPKELEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY 240
            SEDKQNAHLINW ICTSPKEL GLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY
Sbjct: 1441 SEDKQNAHLINWNICTSPKELGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY 1500

Query: 241  TKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH 300
            TKNHQGDIPVVGRNSSA SPWNAIKKWKDW+ESKISW+PNDGSSLSFWHSKW NNIPLS 
Sbjct: 1501 TKNHQGDIPVVGRNSSANSPWNAIKKWKDWYESKISWLPNDGSSLSFWHSKWHNNIPLSL 1560

Query: 301  QIPRLYALSNLQSATVKEV 320
            QIPRLYALSN+QSATVKE+
Sbjct: 1561 QIPRLYALSNMQSATVKEI 1579

[Close]

BLAST of IVF0026574 vs. ExPASy TrEMBL
Match: A0A5D3DZM5 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00720 PE=4 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 9.0e-176
Identity = 297/319 (93.10%), Postives = 304/319 (95.30%), Query Frame = 0


Query: 1   MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEK 60
           MDYLSRLLSHLE+KGAIKGVSFNN CNISHLLFADDVLIFVEDNE+YLNNLQMAL LFEK
Sbjct: 129 MDYLSRLLSHLESKGAIKGVSFNNYCNISHLLFADDVLIFVEDNERYLNNLQMALTLFEK 188

Query: 61  ASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVNYLGVPLGGNPRSRSFWGQTI 120
           ASGLTFN  KSTI+PINISA RTDQIA  FGFQTKFLPVNYLGVPLGGNPRSRSFW QTI
Sbjct: 189 ASGLTFNNSKSTISPINISAGRTDQIASFFGFQTKFLPVNYLGVPLGGNPRSRSFWDQTI 248

Query: 121 ECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGG 180
           ECIHKKLNGWKYSQI KGGRLTLLKASLSSLPTYQLSTFKA VSVYKEIEKHWRDFLWGG
Sbjct: 249 ECIHKKLNGWKYSQISKGGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGG 308

Query: 181 SEDKQNAHLINWRICTSPKELEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY 240
           SEDKQNAHLINW ICTSPKEL G+GISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY
Sbjct: 309 SEDKQNAHLINWNICTSPKELGGMGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY 368

Query: 241 TKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH 300
           TKNHQGDIPVVGRNSSA SPWNAIKKWKDW+ESKISWIPNDGSSLSFWHSKW NNIPLS 
Sbjct: 369 TKNHQGDIPVVGRNSSANSPWNAIKKWKDWYESKISWIPNDGSSLSFWHSKWHNNIPLSL 428

Query: 301 QIPRLYALSNLQSATVKEV 320
           QIPRLYALSN+QSATVKE+
Sbjct: 429 QIPRLYALSNMQSATVKEI 447

[Close]

BLAST of IVF0026574 vs. NCBI nr
Match: TYK10887.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 671 bits (1731), Expect = 8.42e-244
Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 0


Query: 1   MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEK 60
           MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEK
Sbjct: 1   MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEK 60

Query: 61  ASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVNYLGVPLGGNPRSRSFWGQTI 120
           ASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVNYLGVPLGGNPRSRSFWGQTI
Sbjct: 61  ASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVNYLGVPLGGNPRSRSFWGQTI 120

Query: 121 ECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGG 180
           ECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGG
Sbjct: 121 ECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGG 180

Query: 181 SEDKQNAHLINWRICTSPKELEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY 240
           SEDKQNAHLINWRICTSPKELEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY
Sbjct: 181 SEDKQNAHLINWRICTSPKELEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY 240

Query: 241 TKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH 300
           TKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH
Sbjct: 241 TKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH 300

Query: 301 QIPRLYALSNLQSATVKEV 319
           QIPRLYALSNLQSATVKEV
Sbjct: 301 QIPRLYALSNLQSATVKEV 319

[Close]

BLAST of IVF0026574 vs. NCBI nr
Match: KAA0045532.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 627 bits (1617), Expect = 6.42e-221
Identity = 298/319 (93.42%), Postives = 305/319 (95.61%), Query Frame = 0


Query: 1   MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEK 60
           MDYLSRLLSHLE+KGAIKGVSFNNCCNISHLLFADDVLIFVEDNE+YLNNLQMAL LFEK
Sbjct: 129 MDYLSRLLSHLESKGAIKGVSFNNCCNISHLLFADDVLIFVEDNERYLNNLQMALTLFEK 188

Query: 61  ASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVNYLGVPLGGNPRSRSFWGQTI 120
           ASGLTFN  KSTI+PINISA RTDQIA  FGFQTKFLPVNYLGVPLGGNPRSRSFW QTI
Sbjct: 189 ASGLTFNNSKSTISPINISAGRTDQIASFFGFQTKFLPVNYLGVPLGGNPRSRSFWDQTI 248

Query: 121 ECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGG 180
           ECIHKKLNGWKYSQI KGGRLTLLKASLSSLPTYQLSTFKA VSVYKEIEKHWRDFLWGG
Sbjct: 249 ECIHKKLNGWKYSQISKGGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGG 308

Query: 181 SEDKQNAHLINWRICTSPKELEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY 240
           SEDKQNAHLINW ICTSPKEL G+GISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY
Sbjct: 309 SEDKQNAHLINWNICTSPKELGGMGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY 368

Query: 241 TKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH 300
           TKNHQGDIPVVGRNSSA SPWNAIKKWKDW+ESKISWIPNDGSSLSFWHSKW NNIPLS 
Sbjct: 369 TKNHQGDIPVVGRNSSANSPWNAIKKWKDWYESKISWIPNDGSSLSFWHSKWHNNIPLSL 428

Query: 301 QIPRLYALSNLQSATVKEV 319
           QIPRLYALSN+QSATVKE+
Sbjct: 429 QIPRLYALSNMQSATVKEI 447

[Close]

BLAST of IVF0026574 vs. NCBI nr
Match: TYK28859.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 623 bits (1606), Expect = 3.00e-219
Identity = 297/319 (93.10%), Postives = 304/319 (95.30%), Query Frame = 0


Query: 1   MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEK 60
           MDYLSRLLSHLE+KGAIKGVSFNN CNISHLLFADDVLIFVEDNE+YLNNLQMAL LFEK
Sbjct: 129 MDYLSRLLSHLESKGAIKGVSFNNYCNISHLLFADDVLIFVEDNERYLNNLQMALTLFEK 188

Query: 61  ASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVNYLGVPLGGNPRSRSFWGQTI 120
           ASGLTFN  KSTI+PINISA RTDQIA  FGFQTKFLPVNYLGVPLGGNPRSRSFW QTI
Sbjct: 189 ASGLTFNNSKSTISPINISAGRTDQIASFFGFQTKFLPVNYLGVPLGGNPRSRSFWDQTI 248

Query: 121 ECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGG 180
           ECIHKKLNGWKYSQI KGGRLTLLKASLSSLPTYQLSTFKA VSVYKEIEKHWRDFLWGG
Sbjct: 249 ECIHKKLNGWKYSQISKGGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGG 308

Query: 181 SEDKQNAHLINWRICTSPKELEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY 240
           SEDKQNAHLINW ICTSPKEL G+GISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY
Sbjct: 309 SEDKQNAHLINWNICTSPKELGGMGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY 368

Query: 241 TKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH 300
           TKNHQGDIPVVGRNSSA SPWNAIKKWKDW+ESKISWIPNDGSSLSFWHSKW NNIPLS 
Sbjct: 369 TKNHQGDIPVVGRNSSANSPWNAIKKWKDWYESKISWIPNDGSSLSFWHSKWHNNIPLSL 428

Query: 301 QIPRLYALSNLQSATVKEV 319
           QIPRLYALSN+QSATVKE+
Sbjct: 429 QIPRLYALSNMQSATVKEI 447

[Close]

BLAST of IVF0026574 vs. NCBI nr
Match: KAA0056839.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYJ99342.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 617 bits (1591), Expect = 1.70e-215
Identity = 294/319 (92.16%), Postives = 302/319 (94.67%), Query Frame = 0


Query: 1   MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEK 60
           MDYLSRLLSHLE+KGAIKGVSFNN CNISHLLFADDVLIFVEDNE+YLNNLQMAL LFEK
Sbjct: 208 MDYLSRLLSHLESKGAIKGVSFNNYCNISHLLFADDVLIFVEDNERYLNNLQMALTLFEK 267

Query: 61  ASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVNYLGVPLGGNPRSRSFWGQTI 120
           ASGLTFN  KSTI+PINISA RTDQIA  FGFQTKFLPVNYLGVPLGGNPRSRSFW QTI
Sbjct: 268 ASGLTFNNSKSTISPINISAGRTDQIASFFGFQTKFLPVNYLGVPLGGNPRSRSFWSQTI 327

Query: 121 ECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGG 180
           ECIHKKLNGWKYSQI KGGRLTLLKASLSSLPTYQLSTFKA VSVYKEIEKHWRDFLWGG
Sbjct: 328 ECIHKKLNGWKYSQISKGGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGG 387

Query: 181 SEDKQNAHLINWRICTSPKELEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY 240
           SEDKQNAHLINW ICTSPKEL GLGISK+KDTNQALLCKWLWRYHNESNSLWKKCIDAKY
Sbjct: 388 SEDKQNAHLINWNICTSPKELGGLGISKVKDTNQALLCKWLWRYHNESNSLWKKCIDAKY 447

Query: 241 TKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH 300
           TKNHQGDIPVVGRNSSA SPWNAIKKWKDW+ESKISW+ NDGSSLSFWHSKW NNIPLS 
Sbjct: 448 TKNHQGDIPVVGRNSSANSPWNAIKKWKDWYESKISWMANDGSSLSFWHSKWHNNIPLSL 507

Query: 301 QIPRLYALSNLQSATVKEV 319
           Q PRLYALSN+QSATVKE+
Sbjct: 508 QFPRLYALSNMQSATVKEI 526

[Close]

BLAST of IVF0026574 vs. NCBI nr
Match: KAA0057507.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 627 bits (1617), Expect = 8.07e-208
Identity = 298/319 (93.42%), Postives = 305/319 (95.61%), Query Frame = 0


Query: 1    MDYLSRLLSHLETKGAIKGVSFNNCCNISHLLFADDVLIFVEDNEKYLNNLQMALYLFEK 60
            MDYLSRLLSHLE+KGAIKGVSFNNCCNISHLLFADDVLIFVEDNE+YLNNLQMAL LFEK
Sbjct: 1261 MDYLSRLLSHLESKGAIKGVSFNNCCNISHLLFADDVLIFVEDNERYLNNLQMALTLFEK 1320

Query: 61   ASGLTFNLLKSTINPINISADRTDQIARLFGFQTKFLPVNYLGVPLGGNPRSRSFWGQTI 120
            ASGLTFN  KSTI+PINISA RTDQIA  FGFQTKFLPVNYLGVPLGGNPRSRSFW QTI
Sbjct: 1321 ASGLTFNNSKSTISPINISAGRTDQIASFFGFQTKFLPVNYLGVPLGGNPRSRSFWDQTI 1380

Query: 121  ECIHKKLNGWKYSQIFKGGRLTLLKASLSSLPTYQLSTFKALVSVYKEIEKHWRDFLWGG 180
            ECIHKKLNGWKYSQI KGGRLTLLKASLSSLPTYQLSTFKA VSVYKEIEKHWRDFLWGG
Sbjct: 1381 ECIHKKLNGWKYSQISKGGRLTLLKASLSSLPTYQLSTFKAPVSVYKEIEKHWRDFLWGG 1440

Query: 181  SEDKQNAHLINWRICTSPKELEGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY 240
            SEDKQNAHLINW ICTSPKEL GLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY
Sbjct: 1441 SEDKQNAHLINWNICTSPKELGGLGISKLKDTNQALLCKWLWRYHNESNSLWKKCIDAKY 1500

Query: 241  TKNHQGDIPVVGRNSSAKSPWNAIKKWKDWFESKISWIPNDGSSLSFWHSKWQNNIPLSH 300
            TKNHQGDIPVVGRNSSA SPWNAIKKWKDW+ESKISW+PNDGSSLSFWHSKW NNIPLS 
Sbjct: 1501 TKNHQGDIPVVGRNSSANSPWNAIKKWKDWYESKISWLPNDGSSLSFWHSKWHNNIPLSL 1560

Query: 301  QIPRLYALSNLQSATVKEV 319
            QIPRLYALSN+QSATVKE+
Sbjct: 1561 QIPRLYALSNMQSATVKEI 1579

[Close]

BLAST of IVF0026574 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 53.9 bits (128), Expect = 2.7e-07
Identity = 35/144 (24.31%), Postives = 64/144 (44.44%), Query Frame = 0


Query: 150 SLPTYQLSTFKALVSVYKEIEKHWRDFLWGGSEDKQNAHLINW-RICTSPKELEGLGISK 209
           +LP Y +S F+    + K++     +F W   E+K+    + W ++C S ++  GLG   
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRD 61

Query: 210 LKDTNQALLCKWLWRYHNESNSLWKKCIDAKYTKNHQGDIPVVGRNSSAKSPWNAIKKWK 269
           L   NQALL K  +R  ++ ++L  + + ++Y  +       VG   S    W +I   +
Sbjct: 62  LGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPS--YAWRSIIHGR 121

Query: 270 DWFESKISWIPNDGSSLSFWHSKW 293
           +     +     DG     W  +W
Sbjct: 122 ELLSRGLLRTIGDGIHTKVWLDRW 143

The following BLAST results are available for this feature:

BLAST of IVF0026574 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C2F6	2.7e-28	33.51	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
O00370	2.0e-07	23.44	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1	[more]
P93295	3.8e-06	24.31	Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of IVF0026574 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CFY6	2.9e-190	100.00	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7US62	4.8e-177	93.42	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7TQA8	4.8e-177	93.42	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5D3CA17	9.0e-176	93.10	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5D3DZM5	9.0e-176	93.10	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of IVF0026574 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK10887.1	8.42e-244	100.00	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
KAA0045532.1	6.42e-221	93.42	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
TYK28859.1	3.00e-219	93.10	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
KAA0056839.1	1.70e-215	92.16	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYJ993...	[more]
KAA0057507.1	8.07e-208	93.42	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]

BLAST of IVF0026574 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00310.1	2.7e-07	24.31	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33116:SF33	OS01G0885550 PROTEIN	coord: 13..297
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 13..297

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0026574.2	IVF0026574.2	mRNA