IVF0026330 (gene) Melon (IVF77) v1

Overview
NameIVF0026330
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr05: 21216311 .. 21216595 (+)
RNA-Seq ExpressionIVF0026330
SyntenyIVF0026330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTGGCGAACCGGCTCGGACAAGAACCCACTCGATGGCTGACGACTGACGGCGACTGTCGGACAGAGGAGATCGGTGAGTTCCGAGCGACGGGGACGACGAAGGCTGACGGAGACTTCAACAGTGCGGAGAAAGATGCGACGAGGAGGACGACTAACGTGGCTTGGGTAGGGTTGAGGCAGCCGACGGTGAGAAACGAGGTGGCGGTGGTGGAGCAAGGGTTAGGGTTTGTTGATGGAGAGGAAAATGAGGGCTTTTGTGAAGAAGAAAGTGGTGAATAA

mRNA sequence

ATGGGTTTGGCGAACCGGCTCGGACAAGAACCCACTCGATGGCTGACGACTGACGGCGACTGTCGGACAGAGGAGATCGGTGAGTTCCGAGCGACGGGGACGACGAAGGCTGACGGAGACTTCAACAGTGCGGAGAAAGATGCGACGAGGAGGACGACTAACGTGGCTTGGGTAGGGTTGAGGCAGCCGACGGTGAGAAACGAGGTGGCGGTGGTGGAGCAAGGGTTAGGGTTTGTTGATGGAGAGGAAAATGAGGGCTTTTGTGAAGAAGAAAGTGGTGAATAA

Coding sequence (CDS)

ATGGGTTTGGCGAACCGGCTCGGACAAGAACCCACTCGATGGCTGACGACTGACGGCGACTGTCGGACAGAGGAGATCGGTGAGTTCCGAGCGACGGGGACGACGAAGGCTGACGGAGACTTCAACAGTGCGGAGAAAGATGCGACGAGGAGGACGACTAACGTGGCTTGGGTAGGGTTGAGGCAGCCGACGGTGAGAAACGAGGTGGCGGTGGTGGAGCAAGGGTTAGGGTTTGTTGATGGAGAGGAAAATGAGGGCTTTTGTGAAGAAGAAAGTGGTGAATAA

Protein sequence

MGLANRLGQEPTRWLTTDGDCRTEEIGEFRATGTTKADGDFNSAEKDATRRTTNVAWVGLRQPTVRNEVAVVEQGLGFVDGEENEGFCEEESGE
Homology
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BLAST of IVF0026330 vs. NCBI nr
Match: KAA0032866.1 (hypothetical protein E6C27_scaffold81G00310 [Cucumis melo var. makuwa] >TYK09409.1 hypothetical protein E5676_scaffold504G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 48.9 bits (115), Expect = 1.48e-04
Identity = 26/53 (49.06%), Postives = 30/53 (56.60%), Query Frame = 0 

Query: 8   GQEPTRWLTTDGDCRTEEIGEFRATGTTKADGDFNSAEKDATRRTTNVAWVGL 60
           G  P  WL         EIG+FRATGTT AD DFN A KDAT+     AW+ +
Sbjct: 76  GSTPRGWL---------EIGDFRATGTTDADRDFNGAGKDATKSKAYAAWMSV 119

The following BLAST results are available for this feature:
BLAST of IVF0026330 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0026330 vs.
Match NameE-valueIdentityDescription
BLAST of IVF0026330 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0032866.11.48e-0449.06hypothetical protein E6C27_scaffold81G00310 [Cucumis melo var. makuwa] >TYK09409... [more]
BLAST of IVF0026330 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0026330.1IVF0026330.1mRNA