IVF0026178 (gene) Melon (IVF77) v1

Overview


Name	IVF0026178
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Transmembrane protein, putative
Location	chr11: 25685513 .. 25685800 (-)
RNA-Seq Expression	IVF0026178
Synteny	IVF0026178

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACGGCGTCGGAATTTGATTGTTGCCGTTGGGCTGATAGCCTTTGCATCTGCTGGATTAGCATTTCCCTTTTACATGGCGTAAGTAAATGACAGTTTCATTCCTTTAATGAATGGATGAATTTGGAGAAGTTAACATTGAAAAGGATTACGATTCAGGTCTTCAAAAAAACCAGTTATAGATCCGACAAAGCCGCTTCCACCACAGGCCACTTTTCGAGGTCCTTATATCAACACTGGCTCCCGAGACGTTGGACCCGACCATCAAACTTACACCAAGAAGTGA

mRNA sequence

ATGACACGGCGTCGGAATTTGATTGTTGCCGTTGGGCTGATAGCCTTTGCATCTGCTGGATTAGCATTTCCCTTTTACATGGCGTCTTCAAAAAAACCAGTTATAGATCCGACAAAGCCGCTTCCACCACAGGCCACTTTTCGAGGTCCTTATATCAACACTGGCTCCCGAGACGTTGGACCCGACCATCAAACTTACACCAAGAAGTGA

Coding sequence (CDS)

ATGACACGGCGTCGGAATTTGATTGTTGCCGTTGGGCTGATAGCCTTTGCATCTGCTGGATTAGCATTTCCCTTTTACATGGCGTCTTCAAAAAAACCAGTTATAGATCCGACAAAGCCGCTTCCACCACAGGCCACTTTTCGAGGTCCTTATATCAACACTGGCTCCCGAGACGTTGGACCCGACCATCAAACTTACACCAAGAAGTGA

Protein sequence

MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLPPQATFRGPYINTGSRDVGPDHQTYTKK

Homology

[Close]

BLAST of IVF0026178 vs. ExPASy TrEMBL
Match: A0A1S3CQB9 (uncharacterized protein LOC103503042 OS=Cucumis melo OX=3656 GN=LOC103503042 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 8.5e-31
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLPPQATFRGPYINTGSRDVG 60
          MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLPPQATFRGPYINTGSRDVG
Sbjct: 1  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLPPQATFRGPYINTGSRDVG 60

Query: 61 PDHQTYTKK 70
          PDHQTYTKK
Sbjct: 61 PDHQTYTKK 69

[Close]

BLAST of IVF0026178 vs. ExPASy TrEMBL
Match: A0A6J1CHR8 (uncharacterized protein LOC111011024 OS=Momordica charantia OX=3673 GN=LOC111011024 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.0e-29
Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLPPQATFRGPYINTGSRDVG 60
          MTRRRN+IVA GLIAFASAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVG
Sbjct: 1  MTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVG 60

Query: 61 PDHQTYTKK 70
          PDHQTY+KK
Sbjct: 61 PDHQTYSKK 69

[Close]

BLAST of IVF0026178 vs. ExPASy TrEMBL
Match: A0A6J1FTX8 (uncharacterized protein LOC111448766 OS=Cucurbita moschata OX=3662 GN=LOC111448766 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 8.8e-28
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = 0


Query: 4  RRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLPPQATFRGPYINTGSRDVGPDH 63
          RRN+IVA GLIAFASAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDH
Sbjct: 3  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDH 62

Query: 64 QTYTKK 70
          QTYTKK
Sbjct: 63 QTYTKK 68

[Close]

BLAST of IVF0026178 vs. ExPASy TrEMBL
Match: A0A6J1JB19 (uncharacterized protein LOC111484157 OS=Cucurbita maxima OX=3661 GN=LOC111484157 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.6e-27
Identity = 62/66 (93.94%), Postives = 64/66 (96.97%), Query Frame = 0


Query: 4  RRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLPPQATFRGPYINTGSRDVGPDH 63
          R+N+IVA GLIAFASAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDH
Sbjct: 3  RQNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDH 62

Query: 64 QTYTKK 70
          QTYTKK
Sbjct: 63 QTYTKK 68

[Close]

BLAST of IVF0026178 vs. ExPASy TrEMBL
Match: G7JM87 (Transmembrane protein, putative OS=Medicago truncatula OX=3880 GN=MTR_4g057190 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.4e-27
Identity = 60/69 (86.96%), Postives = 66/69 (95.65%), Query Frame = 0


Query: 1  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLPPQATFRGPYINTGSRDVG 60
          M+RRRNL+VA GL+AFASAG+AFPFYMASSKKPVIDPTKPL PQATFRGPYINTGSRD+G
Sbjct: 1  MSRRRNLVVAAGLLAFASAGMAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDIG 60

Query: 61 PDHQTYTKK 70
          PDH+TY KK
Sbjct: 61 PDHETYKKK 69

[Close]

BLAST of IVF0026178 vs. NCBI nr
Match: XP_008465426.1 (PREDICTED: uncharacterized protein LOC103503042 [Cucumis melo] >XP_016903386.1 PREDICTED: uncharacterized protein LOC103503042 [Cucumis melo])

HSP 1 Score: 140 bits (354), Expect = 4.94e-42
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLPPQATFRGPYINTGSRDVG 60
          MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLPPQATFRGPYINTGSRDVG
Sbjct: 1  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLPPQATFRGPYINTGSRDVG 60

Query: 61 PDHQTYTKK 69
          PDHQTYTKK
Sbjct: 61 PDHQTYTKK 69

[Close]

BLAST of IVF0026178 vs. NCBI nr
Match: XP_004145769.1 (uncharacterized protein LOC101222012 [Cucumis sativus])

HSP 1 Score: 137 bits (346), Expect = 8.22e-41
Identity = 68/69 (98.55%), Postives = 68/69 (98.55%), Query Frame = 0


Query: 1  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLPPQATFRGPYINTGSRDVG 60
          MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPL PQATFRGPYINTGSRDVG
Sbjct: 1  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLSPQATFRGPYINTGSRDVG 60

Query: 61 PDHQTYTKK 69
          PDHQTYTKK
Sbjct: 61 PDHQTYTKK 69

[Close]

BLAST of IVF0026178 vs. NCBI nr
Match: XP_022140323.1 (uncharacterized protein LOC111011024 [Momordica charantia])

HSP 1 Score: 134 bits (337), Expect = 1.94e-39
Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLPPQATFRGPYINTGSRDVG 60
          MTRRRN+IVA GLIAFASAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVG
Sbjct: 1  MTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPGKPLPPQATFRGPYINTGSRDVG 60

Query: 61 PDHQTYTKK 69
          PDHQTY+KK
Sbjct: 61 PDHQTYSKK 69

[Close]

BLAST of IVF0026178 vs. NCBI nr
Match: XP_038900698.1 (uncharacterized protein LOC120087838 [Benincasa hispida])

HSP 1 Score: 134 bits (336), Expect = 2.76e-39
Identity = 65/69 (94.20%), Postives = 67/69 (97.10%), Query Frame = 0


Query: 1  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLPPQATFRGPYINTGSRDVG 60
          MTRRRNLIVA+GLIAFASAGLAFPFYMASSKKPVID  KPLPPQATFRGPYINTGSRDVG
Sbjct: 1  MTRRRNLIVAIGLIAFASAGLAFPFYMASSKKPVIDSAKPLPPQATFRGPYINTGSRDVG 60

Query: 61 PDHQTYTKK 69
          PDHQTY+KK
Sbjct: 61 PDHQTYSKK 69

[Close]

BLAST of IVF0026178 vs. NCBI nr
Match: XP_022944261.1 (uncharacterized protein LOC111448766 [Cucurbita moschata] >XP_022944262.1 uncharacterized protein LOC111448766 [Cucurbita moschata] >XP_022944263.1 uncharacterized protein LOC111448766 [Cucurbita moschata] >XP_022944264.1 uncharacterized protein LOC111448766 [Cucurbita moschata] >XP_022944266.1 uncharacterized protein LOC111448766 [Cucurbita moschata])

HSP 1 Score: 130 bits (328), Expect = 4.47e-38
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = 0


Query: 4  RRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLPPQATFRGPYINTGSRDVGPDH 63
          RRN+IVA GLIAFASAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDH
Sbjct: 3  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDH 62

Query: 64 QTYTKK 69
          QTYTKK
Sbjct: 63 QTYTKK 68

[Close]

BLAST of IVF0026178 vs. TAIR 10
Match: AT5G22875.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 124.8 bits (312), Expect = 2.7e-29
Identity = 58/69 (84.06%), Postives = 63/69 (91.30%), Query Frame = 0


Query: 1  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLPPQATFRGPYINTGSRDVG 60
          M   RN++VA GL+ FASAGLAFPFYMASSK+PVIDPTKPLPPQATFRGPYINTGSRDVG
Sbjct: 1  MAPSRNIVVATGLVLFASAGLAFPFYMASSKQPVIDPTKPLPPQATFRGPYINTGSRDVG 60

Query: 61 PDHQTYTKK 70
          PDH+TY KK
Sbjct: 61 PDHRTYPKK 69

[Close]

BLAST of IVF0026178 vs. TAIR 10
Match: AT5G22875.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 32 Blast hits to 32 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 124.8 bits (312), Expect = 2.7e-29
Identity = 58/69 (84.06%), Postives = 63/69 (91.30%), Query Frame = 0


Query: 1  MTRRRNLIVAVGLIAFASAGLAFPFYMASSKKPVIDPTKPLPPQATFRGPYINTGSRDVG 60
          M   RN++VA GL+ FASAGLAFPFYMASSK+PVIDPTKPLPPQATFRGPYINTGSRDVG
Sbjct: 1  MAPSRNIVVATGLVLFASAGLAFPFYMASSKQPVIDPTKPLPPQATFRGPYINTGSRDVG 60

Query: 61 PDHQTYTKK 70
          PDH+TY KK
Sbjct: 61 PDHRTYPKK 69

The following BLAST results are available for this feature:

BLAST of IVF0026178 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0026178 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CQB9	8.5e-31	100.00	uncharacterized protein LOC103503042 OS=Cucumis melo OX=3656 GN=LOC103503042 PE=...	[more]
A0A6J1CHR8	8.0e-29	94.20	uncharacterized protein LOC111011024 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A6J1FTX8	8.8e-28	95.45	uncharacterized protein LOC111448766 OS=Cucurbita moschata OX=3662 GN=LOC1114487...	[more]
A0A6J1JB19	2.6e-27	93.94	uncharacterized protein LOC111484157 OS=Cucurbita maxima OX=3661 GN=LOC111484157...	[more]
G7JM87	3.4e-27	86.96	Transmembrane protein, putative OS=Medicago truncatula OX=3880 GN=MTR_4g057190 P...	[more]

BLAST of IVF0026178 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465426.1	4.94e-42	100.00	PREDICTED: uncharacterized protein LOC103503042 [Cucumis melo] >XP_016903386.1 P...	[more]
XP_004145769.1	8.22e-41	98.55	uncharacterized protein LOC101222012 [Cucumis sativus]	[more]
XP_022140323.1	1.94e-39	94.20	uncharacterized protein LOC111011024 [Momordica charantia]	[more]
XP_038900698.1	2.76e-39	94.20	uncharacterized protein LOC120087838 [Benincasa hispida]	[more]
XP_022944261.1	4.47e-38	95.45	uncharacterized protein LOC111448766 [Cucurbita moschata] >XP_022944262.1 unchar...	[more]

BLAST of IVF0026178 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G22875.1	2.7e-29	84.06	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G22875.2	2.7e-29	84.06	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..69
None	No IPR available	PANTHER	PTHR36070	OSJNBA0019G23.7 PROTEIN	coord: 1..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0026178.1	IVF0026178.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane