IVF0026148 (gene) Melon (IVF77) v1

Overview
NameIVF0026148
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Locationchr08: 28093797 .. 28096060 (-)
RNA-Seq ExpressionIVF0026148
SyntenyIVF0026148
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGTAAAAAATTCCTTGCCCATATTTGAGATCTTCTCTGTCATGGAGATCGTCAACTTTATGACAACTATGTTCTTCCTCTTTCTCCTTGCTACCCCTTCAATGGCTTCTTCTGAAGGTATTATATATTCATGACGATATTTTAAATTAGAATAATGAATTTGAAATATATTGAATTTTGTTGTGTAGGTGGATCATCTGAATATAATAATGGTGGGATAGATGATGATGATTCATCGTCATCATCAAGAAGATATGATAGTGTTTATGAAATAGATTATAGAGGACCAGAAACTCATTCGTCTCATCATATTTCTCCACCTGATCACTCCCATGGAAGAAGGCCTTGGATCATTCATCATCATCATCATCAACTTCTTCAACCCAAACAGCAAACTAATTCTCTCAATCCTACTCCTCCATAACCCACACAATAAATAAAGGTTCTTTCTTTTTTTCTTTTTTTCTTTTTTTTTTCCCCTTCCCAGCTTGGTTTTTTTCCTCCATTTATTAGCTTAGCTAGGAATGGTTTCTCAATTTAAAATAATAATAATAATAACAAATAATAATAATAATGTTTTGGTTTTGAAAAAGTATTAAGAGTTTGGTGAATTCTTGTGCCTTTCTTTTTTTTGTTATTAAAAATAATTGCAAAAGTGGTATAACCCATTTGACCTATGGATGTGTTACTACGGTTGGATAGGAATGAACATGATAGACCGAAGTCAATCGAACCAAAGATAAAAAAAATGTTTGGTTGGTGTCGGTTTAATAATCTAAACTGGTAACTTTTAAAAAAAAAAGTTTAAGGATTTATTCAATCTAAATCGACTGCTCGGCTGAAGATCAACGATATTTTGTATTTTTCGTGATCAGGATCGATTTGAAAATTTGGAAACATGCAATAAAATCAAAGCTTTTTTCTTTCCATTGTAAGTGTTATTATTTTATTAGTTTCAAATATACCTATAGAATCATTTTTAAAGACAGCAAAATGAATCAAACCGACATTTGTAGAATATAACAAAATACCATTTATATCAATGATAAATATTGATACGCTTCTTTCAGTTGCTATCATAATGCATTGATAGATATTTATAGAAGATTATCGCATCTTTACTATCTATAATTAATATTTGATATAATCTGAATTTTTTTTATTATATTTTTAAATATTTTCGATAGTTTTTTCGTTTACAATAATTTTTCGAATATATATTATATTAAAAACATACTTTCATGTAAAAAAAATTAAGAAAATAAAGAGGAAGTTAAACAAACAAACATTTTCTTACTTTCTAAATAAAAAGGAAAAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAATGTAAAGGTTAGTAAATCTTTAAATATAAATCTAACCATAATATTATGGGTCGAGAAATATGTCTTTATCAAAATTTAATTAAGGTTTCCTTCTGAGATCAACAATGCATCGGAAGATTTTCAACCTCAAGTCTTAAAAGATGCAATAAAATATGTCATTTCAATGTAATTAATTGATGAAGTTATTACGTAGCAATAGAATAATTATTTTAAACCACAAAACTTTAAAAAGAAAAAAAAATTATTTGTTTGTATAACAATTATGTGAATAGAGGAATGAAAGGTTGATAATATCATTATTATTTTCCACACAAAAATATGTGACCATAGATAGATAATTACCACATCAACAACAATTAGCAAGAAGTAGATAAGACAAAATAGTTAGTCATCAACTTAATTTTTTTTTTTCTAAAAATGAAAAATGAAATTATATATGATATATTTTATTAGTTGTTAAATTTTACAGATCATCCAGCTTAATCAGTCTATAATCTTGGATAAAATTGATTAGTAAGGATTAAGTTTTTCTTAAAAAAAATTGTTTAATTTAATGAGTATTTACTTCACACTGCATAATAAAATAAAAGATGATGTTTATATTTAGTTTTCCAATTATTGTGTTTACTTGTGCAGGGAATCAAAGTGGGTGAATGGTTAAAGAAGTCTGGGAATTAAAGCAATGTTTCAATCTGTTTAAAAATTAAATCAAATTTAATGAACTTAGAGATATATCTTCTTTGTGTTTTCTTAATTATAATTTTGTACATCACTCACAATAAAATGTATGTCGTGTGTGCAACTCAATGTTGTTAAGTTTATAAGCACTTTAGAGAAATCGACTTATTCTGTCACGTAATACATTATTTTAATTCGTGGTGTTTTTATGCCAAGTTAGAATTGAGATGC

mRNA sequence

CTTGTAAAAAATTCCTTGCCCATATTTGAGATCTTCTCTGTCATGGAGATCGTCAACTTTATGACAACTATGTTCTTCCTCTTTCTCCTTGCTACCCCTTCAATGGCTTCTTCTGAAGGTGGATCATCTGAATATAATAATGGTGGGATAGATGATGATGATTCATCGTCATCATCAAGAAGATATGATAGTGTTTATGAAATAGATTATAGAGGACCAGAAACTCATTCGTCTCATCATATTTCTCCACCTGATCACTCCCATGGAAGAAGGCCTTGGATCATTCATCATCATCATCATCAACTTCTTCAACCCAAACAGCAAACTAATTCTCTCAATCCTACTCCTCCATAACCCACACAATAAATAAAGGGAATCAAAGTGGGTGAATGGTTAAAGAAGTCTGGGAATTAAAGCAATGTTTCAATCTGTTTAAAAATTAAATCAAATTTAATGAACTTAGAGATATATCTTCTTTGTGTTTTCTTAATTATAATTTTGTACATCACTCACAATAAAATGTATGTCGTGTGTGCAACTCAATGTTGTTAAGTTTATAAGCACTTTAGAGAAATCGACTTATTCTGTCACGTAATACATTATTTTAATTCGTGGTGTTTTTATGCCAAGTTAGAATTGAGATGC

Coding sequence (CDS)

ATGGAGATCGTCAACTTTATGACAACTATGTTCTTCCTCTTTCTCCTTGCTACCCCTTCAATGGCTTCTTCTGAAGGTGGATCATCTGAATATAATAATGGTGGGATAGATGATGATGATTCATCGTCATCATCAAGAAGATATGATAGTGTTTATGAAATAGATTATAGAGGACCAGAAACTCATTCGTCTCATCATATTTCTCCACCTGATCACTCCCATGGAAGAAGGCCTTGGATCATTCATCATCATCATCATCAACTTCTTCAACCCAAACAGCAAACTAATTCTCTCAATCCTACTCCTCCATAA

Protein sequence

MEIVNFMTTMFFLFLLATPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGPETHSSHHISPPDHSHGRRPWIIHHHHHQLLQPKQQTNSLNPTPP
Homology
BLAST of IVF0026148 vs. ExPASy TrEMBL
Match: A0A5A7U1B9 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00720 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.4e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query: 1   MEIVNFMTTMFFLFLLATPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGPE 60
           MEIVNFMTTMFFLFLLATPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGPE
Sbjct: 1   MEIVNFMTTMFFLFLLATPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGPE 60

Query: 61  THSSHHISPPDHSHGRRPWIIHHHHHQLLQPKQQTNSLNPTPP 104
           THSSHHISPPDHSHGRRPWIIHHHHHQLLQPKQQTNSLNPTPP
Sbjct: 61  THSSHHISPPDHSHGRRPWIIHHHHHQLLQPKQQTNSLNPTPP 103

BLAST of IVF0026148 vs. ExPASy TrEMBL
Match: A0A0A0KIB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G444970 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.5e-31
Identity = 79/103 (76.70%), Postives = 85/103 (82.52%), Query Frame = 0

Query: 1   MEIVNFMTTMFFLFLL-ATPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGP 60
           MEIVNFMTTMFFLFLL ATPS++SS+G +SE +NGGID           D VYEIDYRGP
Sbjct: 1   MEIVNFMTTMFFLFLLAATPSLSSSKGRASENSNGGID-----------DIVYEIDYRGP 60

Query: 61  ETHSSHHISPPDHSHGRRPWIIHHHHHQLLQPKQQTNSLNPTP 103
           ETHSSHHISPPDHSHGRRPWIIHHH HQLLQPK Q NSL+PTP
Sbjct: 61  ETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPK-QPNSLDPTP 91

BLAST of IVF0026148 vs. ExPASy TrEMBL
Match: A0A6J1IQ06 (uncharacterized protein LOC111478885 OS=Cucurbita maxima OX=3661 GN=LOC111478885 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.5e-12
Identity = 51/85 (60.00%), Postives = 57/85 (67.06%), Query Frame = 0

Query: 4  VNFMTTMFFLFLLATPSM---ASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGPE 63
          ++F TT+FFLFLL TPS    +SSEGGS    NGG+              VYEIDYRGPE
Sbjct: 3  MSFTTTVFFLFLLLTPSFCCCSSSEGGS---ENGGLGS----------SQVYEIDYRGPE 62

Query: 64 THSSHHISPPDHSHGRRPWIIHHHH 86
          THSS HISPP  SHG RPWI+HHHH
Sbjct: 63 THSS-HISPPHPSHG-RPWIVHHHH 72

BLAST of IVF0026148 vs. ExPASy TrEMBL
Match: A0A6J1EDR4 (uncharacterized protein LOC111433241 OS=Cucurbita moschata OX=3662 GN=LOC111433241 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.0e-11
Identity = 52/85 (61.18%), Postives = 59/85 (69.41%), Query Frame = 0

Query: 4  VNFMTTMFFLFLLATPSM---ASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGPE 63
          ++F TT+FF+FLL TPS    +S EGGS    NGG+      SSS     VYEIDYRGPE
Sbjct: 3  MSFTTTVFFIFLLLTPSFCCCSSYEGGS---ENGGM-----GSSS----EVYEIDYRGPE 62

Query: 64 THSSHHISPPDHSHGRRPWIIHHHH 86
          THSS HISPP HSHG RPWI+HH H
Sbjct: 63 THSS-HISPPHHSHG-RPWIVHHRH 73

BLAST of IVF0026148 vs. ExPASy TrEMBL
Match: A0A6J1CPX6 (uncharacterized protein LOC111013652 OS=Momordica charantia OX=3673 GN=LOC111013652 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 5.0e-11
Identity = 56/104 (53.85%), Postives = 65/104 (62.50%), Query Frame = 0

Query: 1   MEIVN-FMTTMFFLFL-LATPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRG 60
           MEI +  + T FFLFL LATPS++SS+GGS    NG ++             VYEIDYRG
Sbjct: 1   MEITSPIIITFFFLFLILATPSISSSKGGS---ENGAMEIS---------SEVYEIDYRG 60

Query: 61  PETHSSHHISPPDHSHGRRPWIIHHHHHQLLQPKQQTNSLNPTP 103
           PETHSSH   P  HSHG RPWIIHH      QPK   +SLNP+P
Sbjct: 61  PETHSSHFSPPDHHSHG-RPWIIHH------QPK--LHSLNPSP 83

BLAST of IVF0026148 vs. NCBI nr
Match: KAA0047279.1 (putative transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 207 bits (528), Expect = 1.59e-67
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query: 1   MEIVNFMTTMFFLFLLATPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGPE 60
           MEIVNFMTTMFFLFLLATPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGPE
Sbjct: 1   MEIVNFMTTMFFLFLLATPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGPE 60

Query: 61  THSSHHISPPDHSHGRRPWIIHHHHHQLLQPKQQTNSLNPTPP 103
           THSSHHISPPDHSHGRRPWIIHHHHHQLLQPKQQTNSLNPTPP
Sbjct: 61  THSSHHISPPDHSHGRRPWIIHHHHHQLLQPKQQTNSLNPTPP 103

BLAST of IVF0026148 vs. NCBI nr
Match: KGN48132.1 (hypothetical protein Csa_003970 [Cucumis sativus])

HSP 1 Score: 144 bits (364), Expect = 1.21e-42
Identity = 79/103 (76.70%), Postives = 85/103 (82.52%), Query Frame = 0

Query: 1   MEIVNFMTTMFFLFLLA-TPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGP 60
           MEIVNFMTTMFFLFLLA TPS++SS+G +SE +NGGIDD            VYEIDYRGP
Sbjct: 1   MEIVNFMTTMFFLFLLAATPSLSSSKGRASENSNGGIDD-----------IVYEIDYRGP 60

Query: 61  ETHSSHHISPPDHSHGRRPWIIHHHHHQLLQPKQQTNSLNPTP 102
           ETHSSHHISPPDHSHGRRPWIIHHH HQLLQPKQ  NSL+PTP
Sbjct: 61  ETHSSHHISPPDHSHGRRPWIIHHHRHQLLQPKQP-NSLDPTP 91

BLAST of IVF0026148 vs. NCBI nr
Match: XP_038881428.1 (uncharacterized protein LOC120072958 [Benincasa hispida])

HSP 1 Score: 102 bits (254), Expect = 8.58e-26
Identity = 67/102 (65.69%), Postives = 75/102 (73.53%), Query Frame = 0

Query: 1   MEIVNFMTTMFFLFLLATPSMASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGPE 60
           ME+++FMT MFFLFLLATPS++S +GGS    NG +D   SSSSS     VYEIDYRGPE
Sbjct: 1   MEMISFMT-MFFLFLLATPSLSSPKGGS---ENGEMDFSSSSSSSE----VYEIDYRGPE 60

Query: 61  THSSHHISPPDHSHGRRPWIIHHHHHQLLQPKQQTNSLNPTP 102
           THSSH ISPPDHSHGR PWI HH  HQL QPKQ     +P P
Sbjct: 61  THSSH-ISPPDHSHGR-PWINHHDQHQL-QPKQPPFKPDPYP 91

BLAST of IVF0026148 vs. NCBI nr
Match: XP_022979166.1 (uncharacterized protein LOC111478885 [Cucurbita maxima])

HSP 1 Score: 80.9 bits (198), Expect = 1.92e-17
Identity = 53/84 (63.10%), Postives = 59/84 (70.24%), Query Frame = 0

Query: 5  NFMTTMFFLFLLATPSM---ASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGPET 64
          +F TT+FFLFLL TPS    +SSEGGS    NGG+       SS+    VYEIDYRGPET
Sbjct: 4  SFTTTVFFLFLLLTPSFCCCSSSEGGS---ENGGL------GSSQ----VYEIDYRGPET 63

Query: 65 HSSHHISPPDHSHGRRPWIIHHHH 85
          HSSH ISPP  SHGR PWI+HHHH
Sbjct: 64 HSSH-ISPPHPSHGR-PWIVHHHH 72

BLAST of IVF0026148 vs. NCBI nr
Match: XP_022925989.1 (uncharacterized protein LOC111433241 [Cucurbita moschata] >KAG7034582.1 hypothetical protein SDJN02_04312 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 79.3 bits (194), Expect = 7.97e-17
Identity = 52/84 (61.90%), Postives = 58/84 (69.05%), Query Frame = 0

Query: 5  NFMTTMFFLFLLATPSM---ASSEGGSSEYNNGGIDDDDSSSSSRRYDSVYEIDYRGPET 64
          +F TT+FF+FLL TPS    +S EGGS    NGG+      SSS     VYEIDYRGPET
Sbjct: 4  SFTTTVFFIFLLLTPSFCCCSSYEGGS---ENGGM-----GSSSE----VYEIDYRGPET 63

Query: 65 HSSHHISPPDHSHGRRPWIIHHHH 85
          HSSH ISPP HSHGR PWI+HH H
Sbjct: 64 HSSH-ISPPHHSHGR-PWIVHHRH 73

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7U1B91.4e-50100.00Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A0A0KIB61.5e-3176.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G444970 PE=4 SV=1[more]
A0A6J1IQ063.5e-1260.00uncharacterized protein LOC111478885 OS=Cucurbita maxima OX=3661 GN=LOC111478885... [more]
A0A6J1EDR41.0e-1161.18uncharacterized protein LOC111433241 OS=Cucurbita moschata OX=3662 GN=LOC1114332... [more]
A0A6J1CPX65.0e-1153.85uncharacterized protein LOC111013652 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
Match NameE-valueIdentityDescription
KAA0047279.11.59e-67100.00putative transmembrane protein [Cucumis melo var. makuwa][more]
KGN48132.11.21e-4276.70hypothetical protein Csa_003970 [Cucumis sativus][more]
XP_038881428.18.58e-2665.69uncharacterized protein LOC120072958 [Benincasa hispida][more]
XP_022979166.11.92e-1763.10uncharacterized protein LOC111478885 [Cucurbita maxima][more]
XP_022925989.17.97e-1761.90uncharacterized protein LOC111433241 [Cucurbita moschata] >KAG7034582.1 hypothet... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..39

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0026148.1IVF0026148.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane