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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCCGAGGCCTTGGAGTACAAAGCACGGCCATGGGCGCGTGCGGCGTGCATCAATGAGCGTGTGTGTGGAGCTCGTTGTATGCCCATGCATCTGCGGGGGGCGTGCCCCCTGGGTGCCGCGCACGCCATGCGTCTGGGGGCGTGTGTGGGGCGTGCATCGCAAGCCCATGCGACTGCAGTGGGGCGTGCGCGTAGGGTGCCGCGCACGCCATGCTTGTGCGAGCGTGGGGATCCGTCTAAGGGGCGTGCATTCTTGGCTTGTAAGTTGCAGATGAGCCTTATTGCCATGATCCACCGAGATTCAGCTCGACCTTACCCACACACAACTTATATATTTATTCCAATTGCCATGGAGGTTATAGCTTATGTAAAAGGACGAAAAACATAA mRNA sequence ATGGCCGAGGCCTTGGAGTACAAAGCACGGCCATGGGCGCGTGCGGCGTGCATCAATGAGCGTGTGTGTGGAGCTCGTTGTATGCCCATGCATCTGCGGGGGGCGTGCCCCCTGGGTGCCGCGCACGCCATGCGTCTGGGGGCGTGTGTGGGGCGTGCATCGCAAGCCCATGCGACTGCAGTGGGGCGTGCGCGTAGGGTGCCGCGCACGCCATGCTTGTGCGAGCGTGGGGATCCGTCTAAGGGGCGTGCATTCTTGGCTTGTAAGTTGCAGATGAGCCTTATTGCCATGATCCACCGAGATTCAGCTCGACCTTACCCACACACAACTTATATATTTATTCCAATTGCCATGGAGGTTATAGCTTATGTAAAAGGACGAAAAACATAA Coding sequence (CDS) ATGGCCGAGGCCTTGGAGTACAAAGCACGGCCATGGGCGCGTGCGGCGTGCATCAATGAGCGTGTGTGTGGAGCTCGTTGTATGCCCATGCATCTGCGGGGGGCGTGCCCCCTGGGTGCCGCGCACGCCATGCGTCTGGGGGCGTGTGTGGGGCGTGCATCGCAAGCCCATGCGACTGCAGTGGGGCGTGCGCGTAGGGTGCCGCGCACGCCATGCTTGTGCGAGCGTGGGGATCCGTCTAAGGGGCGTGCATTCTTGGCTTGTAAGTTGCAGATGAGCCTTATTGCCATGATCCACCGAGATTCAGCTCGACCTTACCCACACACAACTTATATATTTATTCCAATTGCCATGGAGGTTATAGCTTATGTAAAAGGACGAAAAACATAA Protein sequence MAEALEYKARPWARAACINERVCGARCMPMHLRGACPLGAAHAMRLGACVGRASQAHATAVGRARRVPRTPCLCERGDPSKGRAFLACKLQMSLIAMIHRDSARPYPHTTYIFIPIAMEVIAYVKGRKT
Homology
BLAST of IVF0026032 vs. ExPASy TrEMBL
Match: A0A5A7UI67 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1775G00050 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 1.3e-08 Identity = 45/88 (51.14%), Postives = 51/88 (57.95%), Query Frame = 0
Query: 2 AEALEYKARPWARAACINERVCGARCMPMHLRGACPLGAAHAMRLGACVGRASQAHATAV 61
AEALEYKARPWA A C++ R AR MP+ LR GAC RA QAHATAV
Sbjct: 39 AEALEYKARPWACAPCVSGRQWVARSMPVRLR-------------GACAWRAPQAHATAV 98
Query: 62 GRARRVPRTPCLC--ERGDPSKGRAFLA 88
G ARRVPR + ERG + A L+
Sbjct: 99 GHARRVPRVKGIIVQERGGRLRHTASLS 113
BLAST of IVF0026032 vs. NCBI nr
Match: KAA0053169.1 (uncharacterized protein E6C27_scaffold1121G00060 [Cucumis melo var. makuwa] >TYK21291.1 uncharacterized protein E5676_scaffold1775G00050 [Cucumis melo var. makuwa]) HSP 1 Score: 68.2 bits (165), Expect = 2.69e-10 Identity = 45/88 (51.14%), Postives = 51/88 (57.95%), Query Frame = 0
Query: 2 AEALEYKARPWARAACINERVCGARCMPMHLRGACPLGAAHAMRLGACVGRASQAHATAV 61
AEALEYKARPWA A C++ R AR MP+ LRGA C RA QAHATAV
Sbjct: 39 AEALEYKARPWACAPCVSGRQWVARSMPVRLRGA-------------CAWRAPQAHATAV 98
Query: 62 GRARRVPRTPCLC--ERGDPSKGRAFLA 87
G ARRVPR + ERG + A L+
Sbjct: 99 GHARRVPRVKGIIVQERGGRLRHTASLS 113
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| A0A5A7UI67 | 1.3e-08 | 51.14 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
| Match Name | E-value | Identity | Description | |
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| KAA0053169.1 | 2.69e-10 | 51.14 | uncharacterized protein E6C27_scaffold1121G00060 [Cucumis melo var. makuwa] >TYK... | [more] |
| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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