IVF0025739 (gene) Melon (IVF77) v1

Overview


Name	IVF0025739
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr05: 20709570 .. 20710990 (-)
RNA-Seq Expression	IVF0025739
Synteny	IVF0025739

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTTACCTGCATTTGCTGGATTTTGGCAGGTTTTGGCGCTTAAATTGATCATACCTCAGAAGAATGGTCTGTAAATATTCTACAAAATATTTGAATATTTGTATAGGCTCATTTTTGTAAATCTCAGCAAATGCAGAAAGCTGAATTAGTTATAATAGACGGCACACGGATAGGAGTTCTCCCGGATGTAGTGACTTACAATACATTGATTGATGGCTATTTTCGATTTAGTGGCATGGATGCTGCTTATTCTGTTCTTTATAGAATGAGGGAAGCTGGTATAAGCCCAGATGTTATTACTTATAATTCTTTGATAGCTGGTGCAACTAGGAATTTCTCATTAGAACAATCCCTCGATCTGTTTGAAGAGATGATTCAATCGGGTATAACTCCTGATATATGGAGTTACAACACTTTGATGCACTGTTTCTTCATATTAGGAAAGCCAGACGAAGCCTATAGAGTTTTCAAGGACATTATACTCAAAGACCTTTCTCCTCACCCGGTTACATTTAATACAATGATTAATGGCCTTTGTAAACATGGATATACAAGTAATGCTATTATGTTATTCAGAAATTTACGACGCCATGGATTCATCCCTCAATTAGTTACATATAATATTCTTATTAATGGTCTTTGCAAGGTGAGTAGGTTGAGGGCTGCTATAAGGATGCTCAATGAGGCCATAGATTCGGGTCTTGAGCCTAATGCTGTAACATACACAACCTTAATGAAAAGCTGCTTTAGATCTAGGCAATATGAACATGAATTTGAGATTTTTTCTAAGATGACAAAGGATATGCTTTCGATGGCTTTGCTTACTGCACAATTATTGGTGCTTTTCTTAAGTTAGGCAGGTTTGAAGAGGCAAATTTTTATATGGAACAGATGATAAAGAATGATGTAGGAATTGATATGACTTTTTATAACACATTTATTAATTTCTACTGTAAAGAAGGTAAGTTAGAGGCTGCATATAAGTTGCTTGATGAGATAGAGTCACGGGGACTAGAATGCGACGACTGCACACATTCTATAATAACTAATGGGCTGTGCAGGGTTTGTAATATTGAGGGGGCCATGTGACATTTGAATTGTGTGTATACAACAGGTTTTGCGTCAAACGTAGCCTTAAATTGTTTAATTGACAGGTTGTGCAAGGCTGGACAGATTAATCGTGCAATTAGATTGTTTGAATCGATGGAAGCAAAGGATTCTTTTACCTAATACCTCCTTGGTGCACAATCTTTGCAAGGCAAGGAGGTTCCGCCGTGCGTCAAAGTTATTGATTTCACGTTCAAGAGGTGGCATAAAGATTCTTAAGGCTACACAACGTGCAGTTATTGACGATCTTTGTTCTTCAGGATTTACAAGTGAAGCGAGGAAGCTCAAATGCAAATTACGTTTGATTTGA

mRNA sequence

ATGTTTTTACCTGCATTTGCTGGATTTTGGCAGCAAATGCAGAAAGCTGAATTAGTTATAATAGACGGCACACGGATAGGAGTTCTCCCGGATGTAGTGACTTACAATACATTGATTGATGGCTATTTTCGATTTAGTGGCATGGATGCTGCTTATTCTGTTCTTTATAGAATGAGGGAAGCTGGTATAAGCCCAGATGTTATTACTTATAATTCTTTGATAGCTGGTGCAACTAGGAATTTCTCATTAGAACAATCCCTCGATCTGTTTGAAGAGATGATTCAATCGGGTATAACTCCTGATATATGGAGTTACAACACTTTGATGCACTGTTTCTTCATATTAGGAAAGCCAGACGAAGCCTATAGAGTTTTCAAGGACATTATACTCAAAGACCTTTCTCCTCACCCGGTTACATTTAATACAATGATTAATGGCCTTTGTAAACATGGATATACAAGTAATGCTATTATGTTATTCAGAAATTTACGACGCCATGGATTCATCCCTCAATTAGTTACATATAATATTCTTATTAATGGTCTTTGCAAGGTGAGTAGGTTGAGGGCTGCTATAAGGATGCTCAATGAGGCCATAGATTCGGGTCTTGAGCCTAATGCTGTAACATACACAACCTTAATGAAAAGCTGCTTTAGATCTAGGCAATATGAACATGAATTTGAGATTTTTTCTAAGATGACAAAGGATATGCTTTCGATGGCTTTGCTTACTGCACAATTATTGGCAAATTTTTATATGGAACAGATGATAAAGAATGATGTAGGAATTGATATGACTTTTTATAACACATTTATTAATTTCTACTGTAAAGAAGGTAAGTTAGAGGCTGCATATAAGTTGCTTGATGAGATAGAGTCACGGGGACTAGAATGCGACGACTGCACACATTCTATAATAACTAATGGGCTGTGCAGGGTTTGTAATATTGAGGGGGCCATGCTGGACAGATTAATCGTGCAATTAGATTGTTTGAATCGATGGAAGCAAAGGATTCTTTTACCTAATACCTCCTTGGTGCACAATCTTTGCAAGGCAAGGAGGTTCCGCCGTGCGTCAAAGTTATTGATTTCACGTTCAAGAGGTGGCATAAAGATTCTTAAGGCTACACAACGTGCAGTTATTGACGATCTTTGTTCTTCAGGATTTACAAGTGAAGCGAGGAAGCTCAAATGCAAATTACGTTTGATTTGA

Coding sequence (CDS)

ATGTTTTTACCTGCATTTGCTGGATTTTGGCAGCAAATGCAGAAAGCTGAATTAGTTATAATAGACGGCACACGGATAGGAGTTCTCCCGGATGTAGTGACTTACAATACATTGATTGATGGCTATTTTCGATTTAGTGGCATGGATGCTGCTTATTCTGTTCTTTATAGAATGAGGGAAGCTGGTATAAGCCCAGATGTTATTACTTATAATTCTTTGATAGCTGGTGCAACTAGGAATTTCTCATTAGAACAATCCCTCGATCTGTTTGAAGAGATGATTCAATCGGGTATAACTCCTGATATATGGAGTTACAACACTTTGATGCACTGTTTCTTCATATTAGGAAAGCCAGACGAAGCCTATAGAGTTTTCAAGGACATTATACTCAAAGACCTTTCTCCTCACCCGGTTACATTTAATACAATGATTAATGGCCTTTGTAAACATGGATATACAAGTAATGCTATTATGTTATTCAGAAATTTACGACGCCATGGATTCATCCCTCAATTAGTTACATATAATATTCTTATTAATGGTCTTTGCAAGGTGAGTAGGTTGAGGGCTGCTATAAGGATGCTCAATGAGGCCATAGATTCGGGTCTTGAGCCTAATGCTGTAACATACACAACCTTAATGAAAAGCTGCTTTAGATCTAGGCAATATGAACATGAATTTGAGATTTTTTCTAAGATGACAAAGGATATGCTTTCGATGGCTTTGCTTACTGCACAATTATTGGCAAATTTTTATATGGAACAGATGATAAAGAATGATGTAGGAATTGATATGACTTTTTATAACACATTTATTAATTTCTACTGTAAAGAAGGTAAGTTAGAGGCTGCATATAAGTTGCTTGATGAGATAGAGTCACGGGGACTAGAATGCGACGACTGCACACATTCTATAATAACTAATGGGCTGTGCAGGGTTTGTAATATTGAGGGGGCCATGCTGGACAGATTAATCGTGCAATTAGATTGTTTGAATCGATGGAAGCAAAGGATTCTTTTACCTAATACCTCCTTGGTGCACAATCTTTGCAAGGCAAGGAGGTTCCGCCGTGCGTCAAAGTTATTGATTTCACGTTCAAGAGGTGGCATAAAGATTCTTAAGGCTACACAACGTGCAGTTATTGACGATCTTTGTTCTTCAGGATTTACAAGTGAAGCGAGGAAGCTCAAATGCAAATTACGTTTGATTTGA

Protein sequence

MFLPAFAGFWQQMQKAELVIIDGTRIGVLPDVVTYNTLIDGYFRFSGMDAAYSVLYRMREAGISPDVITYNSLIAGATRNFSLEQSLDLFEEMIQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLRRHGFIPQLVTYNILINGLCKVSRLRAAIRMLNEAIDSGLEPNAVTYTTLMKSCFRSRQYEHEFEIFSKMTKDMLSMALLTAQLLANFYMEQMIKNDVGIDMTFYNTFINFYCKEGKLEAAYKLLDEIESRGLECDDCTHSIITNGLCRVCNIEGAMLDRLIVQLDCLNRWKQRILLPNTSLVHNLCKARRFRRASKLLISRSRGGIKILKATQRAVIDDLCSSGFTSEARKLKCKLRLI

Homology

[Close]

BLAST of IVF0025739 vs. ExPASy Swiss-Prot
Match: P0C043 (Putative pentatricopeptide repeat-containing protein At4g17915 OS=Arabidopsis thaliana OX=3702 GN=At4g17915 PE=3 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 2.3e-88
Identity = 191/433 (44.11%), Postives = 268/433 (61.89%), Query Frame = 0


Query: 10  WQQMQKAELVIIDGTRIGVLPDVVTYNTLIDGYFRFSGMDAAYSVLYRMREAGISPDVIT 69
           +++++KAE +IIDG R+GV PDVVTYNTLI GY RF G++ AY+V  RMR+AGI PDV T
Sbjct: 26  FRKLEKAESLIIDGIRLGVDPDVVTYNTLISGYCRFVGIEEAYAVTRRMRDAGIRPDVAT 85

Query: 70  YNSLIAGATRNFSLEQSLDLFEEMIQSGITPDIWSYNTLMHCFFILGKPDEAYRV-FKDI 129
           YNSLIAGA R   L+  L LF+EM++ GI PD+WSYNTLM C+F LGK +EA+RV +KD+
Sbjct: 86  YNSLIAGAARRLMLDHVLYLFDEMLEWGIYPDLWSYNTLMCCYFKLGKHEEAFRVLYKDL 145

Query: 130 ILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLRRHGFIPQLVTYNILINGLCKVSRL 189
            L  L+P P T+N +++ LCK GY  NA+ LF+ ++   F P+L+TYNILINGLCK  R+
Sbjct: 146 QLAGLNPGPDTYNVLLDALCKCGYIDNALELFKEMQSR-FKPELMTYNILINGLCKSRRV 205

Query: 190 RAAIRMLNEAIDSGLEPNAVTYTTLMKSCFRSRQYEHEFEIFSKMTKD-----------M 249
             A  ML E   SG  PNAVTYTT++K  F++R+     ++F +M ++           +
Sbjct: 206 GTAKWMLTELKKSGYTPNAVTYTTILKLYFKTRRIRRGLQLFLEMKREGYTYDGYAYFAV 265

Query: 250 LSMALLTAQLLANF-YMEQMIKNDVGIDMTFYNTFINFYCKEGKLEAAYKLLDEIESRGL 309
           +S  + T +    + YM+++++     D+  YNT +N Y K+G L+A   LL EIE RG+
Sbjct: 266 VSALIKTGRTKEAYEYMQELVRKGRRHDIVSYNTLLNLYFKDGNLDAVDDLLGEIERRGM 325

Query: 310 ECDDCTHSIITNGLCRVCNIEGAM----------LDRLIVQLDCL-------------NR 369
           + D+ TH+II NGL R      A           +   +V  +CL              R
Sbjct: 326 KADEYTHTIIVNGLLRTGQTRRAEEHFVSMGEMGIGLNLVTCNCLVDGLCKAGHVDRAMR 385

Query: 370 WKQRILLPN----TSLVHNLCKARRFRRASKLLISRSRGGIKILKATQRAVIDDLCSSGF 403
           + + + + +    TS+VHNLCK  RF  ASKLL+S    GIKI  + +RAV+  L  SG 
Sbjct: 386 YFESMEVKDEYTYTSVVHNLCKDMRFVCASKLLLSCYNKGIKIPTSARRAVLSGLRMSGC 445

[Close]

BLAST of IVF0025739 vs. ExPASy Swiss-Prot
Match: Q56XR6 (Pentatricopeptide repeat-containing protein At5g46680 OS=Arabidopsis thaliana OX=3702 GN=At5g46680 PE=2 SV=2)

HSP 1 Score: 311.6 bits (797), Expect = 1.3e-83
Identity = 182/433 (42.03%), Postives = 262/433 (60.51%), Query Frame = 0


Query: 10  WQQMQKAELVIIDGTRIGVLPDVVTYNTLIDGYFRFSGMDAAYSVLYRMREAGISPDVIT 69
           ++ +++AE ++IDG R+GVLPDV+TYNTLI GY RF G+D AY+V  RMREAGI PDV T
Sbjct: 26  FRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTT 85

Query: 70  YNSLIAGATRNFSLEQSLDLFEEMIQSGITPDIWSYNTLMHCFFILGKPDEAYRVF-KDI 129
           YNSLI+GA +N  L + L LF+EM+ SG++PD+WSYNTLM C+F LG+  EA+++  +DI
Sbjct: 86  YNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDI 145

Query: 130 ILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLRRHGFIPQLVTYNILINGLCKVSRL 189
            L  L P   T+N +++ LCK G+T NAI LF++L+     P+L+TYNILINGLCK  R+
Sbjct: 146 HLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRV 205

Query: 190 RAAIRMLNEAIDSGLEPNAVTYTTLMKSCFRSRQYEHEFEIFSKMTKD------MLSMAL 249
            +   M+ E   SG  PNAVTYTT++K  F++++ E   ++F KM K+        + A+
Sbjct: 206 GSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAV 265

Query: 250 LTAQLL------ANFYMEQMIKNDV-GIDMTFYNTFINFYCKEGKLEAAYKLLDEIESRG 309
           ++A +       A   M +++++     D+  YNT +N Y K+G L+A   LL+EIE +G
Sbjct: 266 VSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKG 325

Query: 310 LECDDCTHSIITNGLCRVCNIEGAM----------LDRLIVQLDCL-------------- 369
           L+ DD TH+II NGL  + N  GA           +   +V  +CL              
Sbjct: 326 LKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAM 385

Query: 370 ---NRWKQRILLPNTSLVHNLCKARRFRRASKLLISRSRGGIKILKATQRAVIDDLCSSG 402
                 + R     TS+VHNLCK  R   ASKLL+S    G+KI  + +RAV+  +  + 
Sbjct: 386 RLFASMEVRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSGIRETV 445

[Close]

BLAST of IVF0025739 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 5.0e-43
Identity = 109/371 (29.38%), Postives = 183/371 (49.33%), Query Frame = 0


Query: 30  PDVVTYNTLIDGYFRFSGMDAAYSVLYRMREAGISPDVITYNSLIAGATRNFSLEQSLDL 89
           PDV+TY  LI+   R SG+  A  +L  MR+ G +PDV+TYN L+ G  +   L++++  
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296

Query: 90  FEEMIQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIILKDLSPHPVTFNTMINGLCK 149
             +M  SG  P++ ++N ++      G+  +A ++  D++ K  SP  VTFN +IN LC+
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356

Query: 150 HGYTSNAIMLFRNLRRHGFIPQLVTYNILINGLCKVSRLRAAIRMLNEAIDSGLEPNAVT 209
            G    AI +   + +HG  P  ++YN L++G CK  ++  AI  L   +  G  P+ VT
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416

Query: 210 YTTLMKSCFRSRQYEHEFEIFSKMTKDMLSMALLTAQLLANFYMEQMIKNDVGIDMTFYN 269
           Y T++ +  +  + E   EI ++++    S  L+T                       YN
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT-----------------------YN 476

Query: 270 TFINFYCKEGKLEAAYKLLDEIESRGLECDDCTHSIITNGLCRVCNIEGAMLDRLIVQLD 329
           T I+   K GK   A KLLDE+ ++ L+ D  T+S +  GL R   ++ A        + 
Sbjct: 477 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA--------IK 536

Query: 330 CLNRWKQRILLPN----TSLVHNLCKARRFRRASKLLISRSRGGIKILKATQRAVIDDLC 389
             + +++  + PN     S++  LCK+R+  RA   L+     G K  + +   +I+ L 
Sbjct: 537 FFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLA 576

Query: 390 SSGFTSEARKL 397
             G   EA +L
Sbjct: 597 YEGMAKEALEL 576

[Close]

BLAST of IVF0025739 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.5e-42
Identity = 98/320 (30.63%), Postives = 167/320 (52.19%), Query Frame = 0


Query: 12  QMQKAELVIIDGTRIGVLPDVVTYNTLIDGYFRFSGMDAAYSVLYRMREAGISPDVITYN 71
           ++ +AE    +  R G+LPD V Y TLIDG+ +   + AA    Y M    I+PDV+TY 
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390

Query: 72  SLIAGATRNFSLEQSLDLFEEMIQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIILK 131
           ++I+G  +   + ++  LF EM   G+ PD  ++  L++ +   G   +A+RV   +I  
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450

Query: 132 DLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLRRHGFIPQLVTYNILINGLCKVSRLRAA 191
             SP+ VT+ T+I+GLCK G   +A  L   + + G  P + TYN ++NGLCK   +  A
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510

Query: 192 IRMLNEAIDSGLEPNAVTYTTLMKSCFRSRQYEHEFEIFSKMTKDMLSMALLTAQLLANF 251
           ++++ E   +GL  + VTYTTLM +  +S + +   EI  +M    L   ++T  +L N 
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570

Query: 252 Y------------MEQMIKNDVGIDMTFYNTFINFYCKEGKLEAAYKLLDEIESRGLECD 311
           +            +  M+   +  + T +N+ +  YC    L+AA  +  ++ SRG+  D
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630

Query: 312 DCTHSIITNGLCRVCNIEGA 320
             T+  +  G C+  N++ A
Sbjct: 631 GKTYENLVKGHCKARNMKEA 650

[Close]

BLAST of IVF0025739 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.2e-42
Identity = 109/383 (28.46%), Postives = 190/383 (49.61%), Query Frame = 0


Query: 27  GVLPDVVTYNTLIDGYFRFS-GMDAAYSVLYRMREAGISPDVITYNSLIAGATRNFSLEQ 86
           G +P V++YN ++D   R    +  A +V   M E+ +SP+V TYN LI G     +++ 
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223

Query: 87  SLDLFEEMIQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIILKDLSPHPVTFNTMIN 146
           +L LF++M   G  P++ +YNTL+  +  L K D+ +++ + + LK L P+ +++N +IN
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283

Query: 147 GLCKHGYTSNAIMLFRNLRRHGFIPQLVTYNILINGLCKVSRLRAAIRMLNEAIDSGLEP 206
           GLC+ G       +   + R G+    VTYN LI G CK      A+ M  E +  GL P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343

Query: 207 NAVTYTTLMKSCFRSRQYEHEFEIFSKMTKDMLSMALLTAQLLANFY------------M 266
           + +TYT+L+ S  ++       E   +M    L     T   L + +            +
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403

Query: 267 EQMIKNDVGIDMTFYNTFINFYCKEGKLEAAYKLLDEIESRGLECDDCTHSIITNGLCRV 326
            +M  N     +  YN  IN +C  GK+E A  +L++++ +GL  D  ++S + +G CR 
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463

Query: 327 CNIEGAMLDRLIVQLDCLNRWKQRILLPNTSLVHNLCKARRFRRASKLLISRSRGGIKIL 386
            +++ A    L V+ + + +  +   +  +SL+   C+ RR + A  L     R G+   
Sbjct: 464 YDVDEA----LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 523

Query: 387 KATQRAVIDDLCSSGFTSEARKL 397
           + T  A+I+  C  G   +A +L
Sbjct: 524 EFTYTALINAYCMEGDLEKALQL 542

[Close]

BLAST of IVF0025739 vs. ExPASy TrEMBL
Match: A0A0A0KYL3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G481190 PE=4 SV=1)

HSP 1 Score: 649.0 bits (1673), Expect = 1.3e-182
Identity = 345/441 (78.23%), Postives = 358/441 (81.18%), Query Frame = 0


Query: 1   MFLPAFAGFWQQMQKAELVIIDGTRIGVLPDVVTYNTLIDGYFRFSGMDAAYSVLYRMRE 60
           MFLP FAGFWQQMQKAE VIIDG RIGVLPDVVTYNTLIDGY RFSGMDAAYSVLYRMRE
Sbjct: 1   MFLPVFAGFWQQMQKAEAVIIDGIRIGVLPDVVTYNTLIDGYCRFSGMDAAYSVLYRMRE 60

Query: 61  AGISPDVITYNSLIAGATRNFSLEQSLDLFEEMIQSGITPDIWSYNTLMHCFFILGKPDE 120
           AGISPDVITYNSLIAGATRNFSLEQSLDLFEEM+QSGITPDIWSYNTLMHCFFILGKPDE
Sbjct: 61  AGISPDVITYNSLIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTLMHCFFILGKPDE 120

Query: 121 AYRVFKDIILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLRRHGFIPQLVTYNILIN 180
           AYRVFKDIILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNL+RHGFIPQLVTYNILIN
Sbjct: 121 AYRVFKDIILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLQRHGFIPQLVTYNILIN 180

Query: 181 GLCKVSRLRAAIRMLNEAIDSGLEPNAVTYTTLMKSCFRSRQYEHEFEIFSKMTK----- 240
           GLCKV RLRAAIRMLNEA+DSGLEPNAVTYTTLMKSCFRSRQYE  FEIFSKM       
Sbjct: 181 GLCKVDRLRAAIRMLNEAMDSGLEPNAVTYTTLMKSCFRSRQYERGFEIFSKMKNKGYAF 240

Query: 241 DMLSMALLTAQLL-------ANFYMEQMIKNDVGIDMTFYNTFINFYCKEGKLEAAYKLL 300
           D  +   ++   L       A F MEQMIKNDVGID+TFYNTFIN YCKEGKLEAAYKL 
Sbjct: 241 DGFAYCTVSGAFLKLGRFEEAKFCMEQMIKNDVGIDITFYNTFINLYCKEGKLEAAYKLF 300

Query: 301 DEIESRGLECDDCTHSIITNGLCRVCNIEGAM----------LDRLIVQLDCL------- 360
           DEIE RGLECD  THSIITNGLCRV NIEGAM              +V L+CL       
Sbjct: 301 DEIEPRGLECDVYTHSIITNGLCRVGNIEGAMQHLNCVYTTGFASNLVALNCLIDRLCKA 360

Query: 361 ----------NRWKQRILLPNTSLVHNLCKARRFRRASKLLISRSRGGIKILKATQRAVI 403
                        + R     TSLVHNLCKARRFR ASKLLIS SR G+K+LKAT+RAVI
Sbjct: 361 GQIDRAIRLFESMETRDSFTYTSLVHNLCKARRFRCASKLLISCSRDGMKVLKATRRAVI 420

[Close]

BLAST of IVF0025739 vs. ExPASy TrEMBL
Match: A0A1S3B4M5 (putative pentatricopeptide repeat-containing protein At4g17915 OS=Cucumis melo OX=3656 GN=LOC103486102 PE=4 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 1.0e-176
Identity = 337/431 (78.19%), Postives = 350/431 (81.21%), Query Frame = 0


Query: 11  QQMQKAELVIIDGTRIGVLPDVVTYNTLIDGYFRFSGMDAAYSVLYRMREAGISPDVITY 70
           QQMQKAE VIIDG RIGVLP+VVTYNTLIDGY RFSGMDAAYSVLYRMREAGISPDVITY
Sbjct: 21  QQMQKAEAVIIDGIRIGVLPNVVTYNTLIDGYCRFSGMDAAYSVLYRMREAGISPDVITY 80

Query: 71  NSLIAGATRNFSLEQSLDLFEEMIQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIIL 130
           NSLIAGATRNFSLEQSLDLFEEM+QSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIIL
Sbjct: 81  NSLIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIIL 140

Query: 131 KDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLRRHGFIPQLVTYNILINGLCKVSRLRA 190
           KDLSPHPVTFNTMINGLCKHGYTSNA+MLFRNL+RHGFIPQLVTYNILINGLCKVSRLRA
Sbjct: 141 KDLSPHPVTFNTMINGLCKHGYTSNAVMLFRNLQRHGFIPQLVTYNILINGLCKVSRLRA 200

Query: 191 AIRMLNEAIDSGLEPNAVTYTTLMKSCFRSRQYEHEFEIFSKMTK-----DMLSMALLTA 250
           AIRMLNEA+DSGLEPNAVTYTTLMKSCFRSRQYEH FEIFSKM       D  +   +  
Sbjct: 201 AIRMLNEAVDSGLEPNAVTYTTLMKSCFRSRQYEHGFEIFSKMKSKGYAFDGFAYCTVIG 260

Query: 251 QLL-------ANFYMEQMIKNDVGIDMTFYNTFINFYCKEGKLEAAYKLLDEIESRGLEC 310
             L       AN   EQMIKNDVGIDMTFYNT IN YCKEGKLEAAYKLLD+IESRGLEC
Sbjct: 261 AFLKLGRFEEANSCTEQMIKNDVGIDMTFYNTLINLYCKEGKLEAAYKLLDQIESRGLEC 320

Query: 311 DDCTHSIITNGLCRVCNIEGAM----------LDRLIVQLDCL----------------- 370
           DD THSIITNGLCRV NIEGAM              +V L+CL                 
Sbjct: 321 DDYTHSIITNGLCRVGNIEGAMQHLNCVYTTGFASNLVALNCLIDRLCKAGQIDRAIRLF 380

Query: 371 NRWKQRILLPNTSLVHNLCKARRFRRASKLLISRSRGGIKILKATQRAVIDDLCSSGFTS 403
              + R     TSLVHNLCKARRFR ASKLLIS SRGGIKIL+AT+RAVID L SSGFTS
Sbjct: 381 ESMETRDSFTYTSLVHNLCKARRFRCASKLLISCSRGGIKILRATRRAVIDGLYSSGFTS 440

[Close]

BLAST of IVF0025739 vs. ExPASy TrEMBL
Match: A0A5A7TEA6 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00980 PE=4 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 1.9e-175
Identity = 335/429 (78.09%), Postives = 348/429 (81.12%), Query Frame = 0


Query: 13  MQKAELVIIDGTRIGVLPDVVTYNTLIDGYFRFSGMDAAYSVLYRMREAGISPDVITYNS 72
           MQKAE VIIDG RIGVLP+VVTYNTLIDGY RFSGMDAAYSVLYRMREAGISPDVITYNS
Sbjct: 1   MQKAEAVIIDGIRIGVLPNVVTYNTLIDGYCRFSGMDAAYSVLYRMREAGISPDVITYNS 60

Query: 73  LIAGATRNFSLEQSLDLFEEMIQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIILKD 132
           LIAGATRNFSLEQSLDLFEEM+QSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIILKD
Sbjct: 61  LIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIILKD 120

Query: 133 LSPHPVTFNTMINGLCKHGYTSNAIMLFRNLRRHGFIPQLVTYNILINGLCKVSRLRAAI 192
           LSPHPVTFNTMINGLCKHGYTSNA+MLFRNL+RHGFIPQLVTYNILINGLCKVSRLRAAI
Sbjct: 121 LSPHPVTFNTMINGLCKHGYTSNAVMLFRNLQRHGFIPQLVTYNILINGLCKVSRLRAAI 180

Query: 193 RMLNEAIDSGLEPNAVTYTTLMKSCFRSRQYEHEFEIFSKMTK-----DMLSMALLTAQL 252
           RMLNEA+DSGLEPNAVTYTTLMKSCFRSRQYEH FEIFSKM       D  +   +    
Sbjct: 181 RMLNEAVDSGLEPNAVTYTTLMKSCFRSRQYEHGFEIFSKMKSKGYAFDGFAYCTVIGAF 240

Query: 253 L-------ANFYMEQMIKNDVGIDMTFYNTFINFYCKEGKLEAAYKLLDEIESRGLECDD 312
           L       AN   EQMIKNDVGIDMTFYNT IN YCKEGKLEAAYKLLD+IESRGLECDD
Sbjct: 241 LKLGRFEEANSCTEQMIKNDVGIDMTFYNTLINLYCKEGKLEAAYKLLDQIESRGLECDD 300

Query: 313 CTHSIITNGLCRVCNIEGAM----------LDRLIVQLDCL-----------------NR 372
            THSIITNGLCRV NIEGAM              +V L+CL                   
Sbjct: 301 YTHSIITNGLCRVGNIEGAMQHLNCVYTTGFASNLVALNCLIDRLCKAGQIDRAIRLFES 360

Query: 373 WKQRILLPNTSLVHNLCKARRFRRASKLLISRSRGGIKILKATQRAVIDDLCSSGFTSEA 403
            + R     TSLVHNLCKARRFR ASKLLIS SRGGIKIL+AT+RAVID L SSGFTSEA
Sbjct: 361 METRDSFTYTSLVHNLCKARRFRCASKLLISCSRGGIKILRATRRAVIDGLYSSGFTSEA 420

[Close]

BLAST of IVF0025739 vs. ExPASy TrEMBL
Match: A0A6J1D2P0 (putative pentatricopeptide repeat-containing protein At4g17915 OS=Momordica charantia OX=3673 GN=LOC111016743 PE=4 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 1.2e-161
Identity = 308/431 (71.46%), Postives = 339/431 (78.65%), Query Frame = 0


Query: 11  QQMQKAELVIIDGTRIGVLPDVVTYNTLIDGYFRFSGMDAAYSVLYRMREAGISPDVITY 70
           +QMQKAE VIIDG R+GVLPDVVTYNTL+DGY RF GMDAAYSV+YRMREAGISPDVITY
Sbjct: 21  RQMQKAEAVIIDGIRLGVLPDVVTYNTLLDGYCRFIGMDAAYSVIYRMREAGISPDVITY 80

Query: 71  NSLIAGATRNFSLEQSLDLFEEMIQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIIL 130
           NSLIAGATRN SLEQSLDLFEEM+QSGITPDIWSYNTLMHCFF LGKPDEA RVFKDIIL
Sbjct: 81  NSLIAGATRNCSLEQSLDLFEEMLQSGITPDIWSYNTLMHCFFRLGKPDEANRVFKDIIL 140

Query: 131 KDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLRRHGFIPQLVTYNILINGLCKVSRLRA 190
           KDLSPHPVTFNTMINGLCK+GYTSNAIMLFRNL+RHGF+PQLVTYNILINGLCKV RL+A
Sbjct: 141 KDLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVPQLVTYNILINGLCKVGRLKA 200

Query: 191 AIRMLNEAIDSGLEPNAVTYTTLMKSCFRSRQYEHEFEIFSKMTK-----DMLSMALLTA 250
           A RMLNEA DSGLEP+A+TYTTLMKSC RSRQY+H FEIF +M       D  +   +  
Sbjct: 201 ARRMLNEARDSGLEPDAITYTTLMKSCLRSRQYKHGFEIFFEMKNKGYAFDGFAYCTVIG 260

Query: 251 QLL-------ANFYMEQMIKNDVGIDMTFYNTFINFYCKEGKLEAAYKLLDEIESRGLEC 310
             L       AN  MEQMI+N +GID+ FYNTFI+ YCKEGKL+AAYKLLDEIESRGLE 
Sbjct: 261 AFLKLGRFEEANVCMEQMIRNRMGIDLVFYNTFIHLYCKEGKLDAAYKLLDEIESRGLEF 320

Query: 311 DDCTHSIITNGLCRVCNIEGAM----------LDRLIVQLDCL----------------- 370
           D+ TH+IIT+GLCR  NI+GA           L   +V L+CL                 
Sbjct: 321 DNYTHTIITDGLCRAGNIDGARRHLNYMYTTGLASNLVPLNCLIDRLCKAGQIDHAMKLF 380

Query: 371 NRWKQRILLPNTSLVHNLCKARRFRRASKLLISRSRGGIKILKATQRAVIDDLCSSGFTS 403
              + R     TSLVHNLCKARRFR ASKLL+S  RGG+K+LK+TQRAVID LCSSGFTS
Sbjct: 381 ESMETRDSFTYTSLVHNLCKARRFRCASKLLLSCIRGGMKVLKSTQRAVIDGLCSSGFTS 440

[Close]

BLAST of IVF0025739 vs. ExPASy TrEMBL
Match: A0A6J1IFW8 (putative pentatricopeptide repeat-containing protein At4g17915 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472462 PE=4 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 1.3e-158
Identity = 305/431 (70.77%), Postives = 335/431 (77.73%), Query Frame = 0


Query: 11  QQMQKAELVIIDGTRIGVLPDVVTYNTLIDGYFRFSGMDAAYSVLYRMREAGISPDVITY 70
           QQMQKAE VIIDG R+GVLPDVVTYNTLIDGY RFSGMDAAYSVLYRMREAGISPDVITY
Sbjct: 21  QQMQKAEDVIIDGIRLGVLPDVVTYNTLIDGYCRFSGMDAAYSVLYRMREAGISPDVITY 80

Query: 71  NSLIAGATRNFSLEQSLDLFEEMIQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIIL 130
           NSLIAGA+RN SLEQSLDLFEEM+QSGITPDIWSYNTLMHC F LGKPDEA R+FKDIIL
Sbjct: 81  NSLIAGASRNRSLEQSLDLFEEMLQSGITPDIWSYNTLMHCLFRLGKPDEANRIFKDIIL 140

Query: 131 KDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLRRHGFIPQLVTYNILINGLCKVSRLRA 190
           K LSPHPVTFNTMINGLCK+GYTSNAIMLFRNL+RHGF+PQLVTYNILINGLCKV R++A
Sbjct: 141 KGLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVPQLVTYNILINGLCKVGRMKA 200

Query: 191 AIRMLNEAIDSGLEPNAVTYTTLMKSCFRSRQYEHEFEIFSKMTK-----DMLSMALLTA 250
           A RMLNEA+DSGLEP AVTYTTLMKSCFR RQY+H FEIF +M       D  +   +  
Sbjct: 201 AWRMLNEAMDSGLEPGAVTYTTLMKSCFRCRQYKHGFEIFFEMKNKGYAFDGFAYCTVIG 260

Query: 251 QLL-------ANFYMEQMIKNDVGIDMTFYNTFINFYCKEGKLEAAYKLLDEIESRGLEC 310
             L       AN  MEQMI+N +GID+ FYNT IN YCKEGKLEAAYKLLDE+ES GLE 
Sbjct: 261 AFLKLGRFEEANVCMEQMIRNGLGIDLVFYNTLINLYCKEGKLEAAYKLLDELESLGLEY 320

Query: 311 DDCTHSIITNGLCRVCNIEGAM----------LDRLIVQLDCL----------------- 370
           DD THSIIT+GLCR  NIEGA               +V L+CL                 
Sbjct: 321 DDYTHSIITDGLCRNGNIEGAWRHLNYMYTTGFTSNLVALNCLIDRLGKAGQIDHAMKLF 380

Query: 371 NRWKQRILLPNTSLVHNLCKARRFRRASKLLISRSRGGIKILKATQRAVIDDLCSSGFTS 403
              + R  +  TSLVHNLCKARRFR ASKLLIS  +GG+K+LK+TQR VID L SSGFTS
Sbjct: 381 ESMEIRDSITYTSLVHNLCKARRFRCASKLLISCIKGGMKVLKSTQRTVIDGLRSSGFTS 440

[Close]

BLAST of IVF0025739 vs. NCBI nr
Match: XP_008442168.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At4g17915 [Cucumis melo] >XP_008442169.1 PREDICTED: putative pentatricopeptide repeat-containing protein At4g17915 [Cucumis melo] >XP_008442170.1 PREDICTED: putative pentatricopeptide repeat-containing protein At4g17915 [Cucumis melo])

HSP 1 Score: 624 bits (1608), Expect = 2.10e-221
Identity = 337/431 (78.19%), Postives = 350/431 (81.21%), Query Frame = 0


Query: 11  QQMQKAELVIIDGTRIGVLPDVVTYNTLIDGYFRFSGMDAAYSVLYRMREAGISPDVITY 70
           QQMQKAE VIIDG RIGVLP+VVTYNTLIDGY RFSGMDAAYSVLYRMREAGISPDVITY
Sbjct: 21  QQMQKAEAVIIDGIRIGVLPNVVTYNTLIDGYCRFSGMDAAYSVLYRMREAGISPDVITY 80

Query: 71  NSLIAGATRNFSLEQSLDLFEEMIQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIIL 130
           NSLIAGATRNFSLEQSLDLFEEM+QSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIIL
Sbjct: 81  NSLIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIIL 140

Query: 131 KDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLRRHGFIPQLVTYNILINGLCKVSRLRA 190
           KDLSPHPVTFNTMINGLCKHGYTSNA+MLFRNL+RHGFIPQLVTYNILINGLCKVSRLRA
Sbjct: 141 KDLSPHPVTFNTMINGLCKHGYTSNAVMLFRNLQRHGFIPQLVTYNILINGLCKVSRLRA 200

Query: 191 AIRMLNEAIDSGLEPNAVTYTTLMKSCFRSRQYEHEFEIFSKMTK-----DMLSMALLTA 250
           AIRMLNEA+DSGLEPNAVTYTTLMKSCFRSRQYEH FEIFSKM       D  +   +  
Sbjct: 201 AIRMLNEAVDSGLEPNAVTYTTLMKSCFRSRQYEHGFEIFSKMKSKGYAFDGFAYCTVIG 260

Query: 251 QLL-------ANFYMEQMIKNDVGIDMTFYNTFINFYCKEGKLEAAYKLLDEIESRGLEC 310
             L       AN   EQMIKNDVGIDMTFYNT IN YCKEGKLEAAYKLLD+IESRGLEC
Sbjct: 261 AFLKLGRFEEANSCTEQMIKNDVGIDMTFYNTLINLYCKEGKLEAAYKLLDQIESRGLEC 320

Query: 311 DDCTHSIITNGLCRVCNIEGAM----------LDRLIVQLDCL----------------- 370
           DD THSIITNGLCRV NIEGAM              +V L+CL                 
Sbjct: 321 DDYTHSIITNGLCRVGNIEGAMQHLNCVYTTGFASNLVALNCLIDRLCKAGQIDRAIRLF 380

Query: 371 NRWKQRILLPNTSLVHNLCKARRFRRASKLLISRSRGGIKILKATQRAVIDDLCSSGFTS 402
              + R     TSLVHNLCKARRFR ASKLLIS SRGGIKIL+AT+RAVID L SSGFTS
Sbjct: 381 ESMETRDSFTYTSLVHNLCKARRFRCASKLLISCSRGGIKILRATRRAVIDGLYSSGFTS 440

[Close]

BLAST of IVF0025739 vs. NCBI nr
Match: XP_031740560.1 (putative pentatricopeptide repeat-containing protein At4g17915 [Cucumis sativus] >KAE8649736.1 hypothetical protein Csa_012878 [Cucumis sativus])

HSP 1 Score: 622 bits (1605), Expect = 6.01e-221
Identity = 336/431 (77.96%), Postives = 349/431 (80.97%), Query Frame = 0


Query: 11  QQMQKAELVIIDGTRIGVLPDVVTYNTLIDGYFRFSGMDAAYSVLYRMREAGISPDVITY 70
           QQMQKAE VIIDG RIGVLPDVVTYNTLIDGY RFSGMDAAYSVLYRMREAGISPDVITY
Sbjct: 21  QQMQKAEAVIIDGIRIGVLPDVVTYNTLIDGYCRFSGMDAAYSVLYRMREAGISPDVITY 80

Query: 71  NSLIAGATRNFSLEQSLDLFEEMIQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIIL 130
           NSLIAGATRNFSLEQSLDLFEEM+QSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIIL
Sbjct: 81  NSLIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIIL 140

Query: 131 KDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLRRHGFIPQLVTYNILINGLCKVSRLRA 190
           KDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNL+RHGFIPQLVTYNILINGLCKV RLRA
Sbjct: 141 KDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLQRHGFIPQLVTYNILINGLCKVDRLRA 200

Query: 191 AIRMLNEAIDSGLEPNAVTYTTLMKSCFRSRQYEHEFEIFSKMTK-----DMLSMALLTA 250
           AIRMLNEA+DSGLEPNAVTYTTLMKSCFRSRQYE  FEIFSKM       D  +   ++ 
Sbjct: 201 AIRMLNEAMDSGLEPNAVTYTTLMKSCFRSRQYERGFEIFSKMKNKGYAFDGFAYCTVSG 260

Query: 251 QLL-------ANFYMEQMIKNDVGIDMTFYNTFINFYCKEGKLEAAYKLLDEIESRGLEC 310
             L       A F MEQMIKNDVGID+TFYNTFIN YCKEGKLEAAYKL DEIE RGLEC
Sbjct: 261 AFLKLGRFEEAKFCMEQMIKNDVGIDITFYNTFINLYCKEGKLEAAYKLFDEIEPRGLEC 320

Query: 311 DDCTHSIITNGLCRVCNIEGAM----------LDRLIVQLDCL----------------- 370
           D  THSIITNGLCRV NIEGAM              +V L+CL                 
Sbjct: 321 DVYTHSIITNGLCRVGNIEGAMQHLNCVYTTGFASNLVALNCLIDRLCKAGQIDRAIRLF 380

Query: 371 NRWKQRILLPNTSLVHNLCKARRFRRASKLLISRSRGGIKILKATQRAVIDDLCSSGFTS 402
              + R     TSLVHNLCKARRFR ASKLLIS SR G+K+LKAT+RAVID LCSSGFTS
Sbjct: 381 ESMETRDSFTYTSLVHNLCKARRFRCASKLLISCSRDGMKVLKATRRAVIDGLCSSGFTS 440

[Close]

BLAST of IVF0025739 vs. NCBI nr
Match: KAA0041278.1 (putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK16076.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 620 bits (1598), Expect = 3.14e-220
Identity = 335/429 (78.09%), Postives = 348/429 (81.12%), Query Frame = 0


Query: 13  MQKAELVIIDGTRIGVLPDVVTYNTLIDGYFRFSGMDAAYSVLYRMREAGISPDVITYNS 72
           MQKAE VIIDG RIGVLP+VVTYNTLIDGY RFSGMDAAYSVLYRMREAGISPDVITYNS
Sbjct: 1   MQKAEAVIIDGIRIGVLPNVVTYNTLIDGYCRFSGMDAAYSVLYRMREAGISPDVITYNS 60

Query: 73  LIAGATRNFSLEQSLDLFEEMIQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIILKD 132
           LIAGATRNFSLEQSLDLFEEM+QSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIILKD
Sbjct: 61  LIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIILKD 120

Query: 133 LSPHPVTFNTMINGLCKHGYTSNAIMLFRNLRRHGFIPQLVTYNILINGLCKVSRLRAAI 192
           LSPHPVTFNTMINGLCKHGYTSNA+MLFRNL+RHGFIPQLVTYNILINGLCKVSRLRAAI
Sbjct: 121 LSPHPVTFNTMINGLCKHGYTSNAVMLFRNLQRHGFIPQLVTYNILINGLCKVSRLRAAI 180

Query: 193 RMLNEAIDSGLEPNAVTYTTLMKSCFRSRQYEHEFEIFSKMTK-----DMLSMALLTAQL 252
           RMLNEA+DSGLEPNAVTYTTLMKSCFRSRQYEH FEIFSKM       D  +   +    
Sbjct: 181 RMLNEAVDSGLEPNAVTYTTLMKSCFRSRQYEHGFEIFSKMKSKGYAFDGFAYCTVIGAF 240

Query: 253 L-------ANFYMEQMIKNDVGIDMTFYNTFINFYCKEGKLEAAYKLLDEIESRGLECDD 312
           L       AN   EQMIKNDVGIDMTFYNT IN YCKEGKLEAAYKLLD+IESRGLECDD
Sbjct: 241 LKLGRFEEANSCTEQMIKNDVGIDMTFYNTLINLYCKEGKLEAAYKLLDQIESRGLECDD 300

Query: 313 CTHSIITNGLCRVCNIEGAM----------LDRLIVQLDCL-----------------NR 372
            THSIITNGLCRV NIEGAM              +V L+CL                   
Sbjct: 301 YTHSIITNGLCRVGNIEGAMQHLNCVYTTGFASNLVALNCLIDRLCKAGQIDRAIRLFES 360

Query: 373 WKQRILLPNTSLVHNLCKARRFRRASKLLISRSRGGIKILKATQRAVIDDLCSSGFTSEA 402
            + R     TSLVHNLCKARRFR ASKLLIS SRGGIKIL+AT+RAVID L SSGFTSEA
Sbjct: 361 METRDSFTYTSLVHNLCKARRFRCASKLLISCSRGGIKILRATRRAVIDGLYSSGFTSEA 420

[Close]

BLAST of IVF0025739 vs. NCBI nr
Match: XP_022147934.1 (putative pentatricopeptide repeat-containing protein At4g17915 [Momordica charantia] >XP_022147935.1 putative pentatricopeptide repeat-containing protein At4g17915 [Momordica charantia] >XP_022147936.1 putative pentatricopeptide repeat-containing protein At4g17915 [Momordica charantia] >XP_022147937.1 putative pentatricopeptide repeat-containing protein At4g17915 [Momordica charantia] >XP_022147938.1 putative pentatricopeptide repeat-containing protein At4g17915 [Momordica charantia])

HSP 1 Score: 573 bits (1478), Expect = 1.24e-201
Identity = 308/431 (71.46%), Postives = 339/431 (78.65%), Query Frame = 0


Query: 11  QQMQKAELVIIDGTRIGVLPDVVTYNTLIDGYFRFSGMDAAYSVLYRMREAGISPDVITY 70
           +QMQKAE VIIDG R+GVLPDVVTYNTL+DGY RF GMDAAYSV+YRMREAGISPDVITY
Sbjct: 21  RQMQKAEAVIIDGIRLGVLPDVVTYNTLLDGYCRFIGMDAAYSVIYRMREAGISPDVITY 80

Query: 71  NSLIAGATRNFSLEQSLDLFEEMIQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIIL 130
           NSLIAGATRN SLEQSLDLFEEM+QSGITPDIWSYNTLMHCFF LGKPDEA RVFKDIIL
Sbjct: 81  NSLIAGATRNCSLEQSLDLFEEMLQSGITPDIWSYNTLMHCFFRLGKPDEANRVFKDIIL 140

Query: 131 KDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLRRHGFIPQLVTYNILINGLCKVSRLRA 190
           KDLSPHPVTFNTMINGLCK+GYTSNAIMLFRNL+RHGF+PQLVTYNILINGLCKV RL+A
Sbjct: 141 KDLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVPQLVTYNILINGLCKVGRLKA 200

Query: 191 AIRMLNEAIDSGLEPNAVTYTTLMKSCFRSRQYEHEFEIFSKMTK-----DMLSMALLTA 250
           A RMLNEA DSGLEP+A+TYTTLMKSC RSRQY+H FEIF +M       D  +   +  
Sbjct: 201 ARRMLNEARDSGLEPDAITYTTLMKSCLRSRQYKHGFEIFFEMKNKGYAFDGFAYCTVIG 260

Query: 251 QLL-------ANFYMEQMIKNDVGIDMTFYNTFINFYCKEGKLEAAYKLLDEIESRGLEC 310
             L       AN  MEQMI+N +GID+ FYNTFI+ YCKEGKL+AAYKLLDEIESRGLE 
Sbjct: 261 AFLKLGRFEEANVCMEQMIRNRMGIDLVFYNTFIHLYCKEGKLDAAYKLLDEIESRGLEF 320

Query: 311 DDCTHSIITNGLCRVCNIEGAM----------LDRLIVQLDCL----------------- 370
           D+ TH+IIT+GLCR  NI+GA           L   +V L+CL                 
Sbjct: 321 DNYTHTIITDGLCRAGNIDGARRHLNYMYTTGLASNLVPLNCLIDRLCKAGQIDHAMKLF 380

Query: 371 NRWKQRILLPNTSLVHNLCKARRFRRASKLLISRSRGGIKILKATQRAVIDDLCSSGFTS 402
              + R     TSLVHNLCKARRFR ASKLL+S  RGG+K+LK+TQRAVID LCSSGFTS
Sbjct: 381 ESMETRDSFTYTSLVHNLCKARRFRCASKLLLSCIRGGMKVLKSTQRAVIDGLCSSGFTS 440

[Close]

BLAST of IVF0025739 vs. NCBI nr
Match: XP_022973869.1 (putative pentatricopeptide repeat-containing protein At4g17915 isoform X1 [Cucurbita maxima])

HSP 1 Score: 563 bits (1452), Expect = 1.11e-197
Identity = 305/431 (70.77%), Postives = 335/431 (77.73%), Query Frame = 0


Query: 11  QQMQKAELVIIDGTRIGVLPDVVTYNTLIDGYFRFSGMDAAYSVLYRMREAGISPDVITY 70
           QQMQKAE VIIDG R+GVLPDVVTYNTLIDGY RFSGMDAAYSVLYRMREAGISPDVITY
Sbjct: 21  QQMQKAEDVIIDGIRLGVLPDVVTYNTLIDGYCRFSGMDAAYSVLYRMREAGISPDVITY 80

Query: 71  NSLIAGATRNFSLEQSLDLFEEMIQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIIL 130
           NSLIAGA+RN SLEQSLDLFEEM+QSGITPDIWSYNTLMHC F LGKPDEA R+FKDIIL
Sbjct: 81  NSLIAGASRNRSLEQSLDLFEEMLQSGITPDIWSYNTLMHCLFRLGKPDEANRIFKDIIL 140

Query: 131 KDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLRRHGFIPQLVTYNILINGLCKVSRLRA 190
           K LSPHPVTFNTMINGLCK+GYTSNAIMLFRNL+RHGF+PQLVTYNILINGLCKV R++A
Sbjct: 141 KGLSPHPVTFNTMINGLCKYGYTSNAIMLFRNLQRHGFVPQLVTYNILINGLCKVGRMKA 200

Query: 191 AIRMLNEAIDSGLEPNAVTYTTLMKSCFRSRQYEHEFEIFSKMTK-----DMLSMALLTA 250
           A RMLNEA+DSGLEP AVTYTTLMKSCFR RQY+H FEIF +M       D  +   +  
Sbjct: 201 AWRMLNEAMDSGLEPGAVTYTTLMKSCFRCRQYKHGFEIFFEMKNKGYAFDGFAYCTVIG 260

Query: 251 QLL-------ANFYMEQMIKNDVGIDMTFYNTFINFYCKEGKLEAAYKLLDEIESRGLEC 310
             L       AN  MEQMI+N +GID+ FYNT IN YCKEGKLEAAYKLLDE+ES GLE 
Sbjct: 261 AFLKLGRFEEANVCMEQMIRNGLGIDLVFYNTLINLYCKEGKLEAAYKLLDELESLGLEY 320

Query: 311 DDCTHSIITNGLCRVCNIEGAM----------LDRLIVQLDCL----------------- 370
           DD THSIIT+GLCR  NIEGA               +V L+CL                 
Sbjct: 321 DDYTHSIITDGLCRNGNIEGAWRHLNYMYTTGFTSNLVALNCLIDRLGKAGQIDHAMKLF 380

Query: 371 NRWKQRILLPNTSLVHNLCKARRFRRASKLLISRSRGGIKILKATQRAVIDDLCSSGFTS 402
              + R  +  TSLVHNLCKARRFR ASKLLIS  +GG+K+LK+TQR VID L SSGFTS
Sbjct: 381 ESMEIRDSITYTSLVHNLCKARRFRCASKLLISCIKGGMKVLKSTQRTVIDGLRSSGFTS 440

[Close]

BLAST of IVF0025739 vs. TAIR 10
Match: AT5G46680.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 311.6 bits (797), Expect = 9.2e-85
Identity = 182/433 (42.03%), Postives = 262/433 (60.51%), Query Frame = 0


Query: 10  WQQMQKAELVIIDGTRIGVLPDVVTYNTLIDGYFRFSGMDAAYSVLYRMREAGISPDVIT 69
           ++ +++AE ++IDG R+GVLPDV+TYNTLI GY RF G+D AY+V  RMREAGI PDV T
Sbjct: 26  FRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTT 85

Query: 70  YNSLIAGATRNFSLEQSLDLFEEMIQSGITPDIWSYNTLMHCFFILGKPDEAYRVF-KDI 129
           YNSLI+GA +N  L + L LF+EM+ SG++PD+WSYNTLM C+F LG+  EA+++  +DI
Sbjct: 86  YNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDI 145

Query: 130 ILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLRRHGFIPQLVTYNILINGLCKVSRL 189
            L  L P   T+N +++ LCK G+T NAI LF++L+     P+L+TYNILINGLCK  R+
Sbjct: 146 HLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRV 205

Query: 190 RAAIRMLNEAIDSGLEPNAVTYTTLMKSCFRSRQYEHEFEIFSKMTKD------MLSMAL 249
            +   M+ E   SG  PNAVTYTT++K  F++++ E   ++F KM K+        + A+
Sbjct: 206 GSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAV 265

Query: 250 LTAQLL------ANFYMEQMIKNDV-GIDMTFYNTFINFYCKEGKLEAAYKLLDEIESRG 309
           ++A +       A   M +++++     D+  YNT +N Y K+G L+A   LL+EIE +G
Sbjct: 266 VSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKG 325

Query: 310 LECDDCTHSIITNGLCRVCNIEGAM----------LDRLIVQLDCL-------------- 369
           L+ DD TH+II NGL  + N  GA           +   +V  +CL              
Sbjct: 326 LKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAM 385

Query: 370 ---NRWKQRILLPNTSLVHNLCKARRFRRASKLLISRSRGGIKILKATQRAVIDDLCSSG 402
                 + R     TS+VHNLCK  R   ASKLL+S    G+KI  + +RAV+  +  + 
Sbjct: 386 RLFASMEVRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSGIRETV 445

[Close]

BLAST of IVF0025739 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 176.8 bits (447), Expect = 3.5e-44
Identity = 109/371 (29.38%), Postives = 183/371 (49.33%), Query Frame = 0


Query: 30  PDVVTYNTLIDGYFRFSGMDAAYSVLYRMREAGISPDVITYNSLIAGATRNFSLEQSLDL 89
           PDV+TY  LI+   R SG+  A  +L  MR+ G +PDV+TYN L+ G  +   L++++  
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296

Query: 90  FEEMIQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIILKDLSPHPVTFNTMINGLCK 149
             +M  SG  P++ ++N ++      G+  +A ++  D++ K  SP  VTFN +IN LC+
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356

Query: 150 HGYTSNAIMLFRNLRRHGFIPQLVTYNILINGLCKVSRLRAAIRMLNEAIDSGLEPNAVT 209
            G    AI +   + +HG  P  ++YN L++G CK  ++  AI  L   +  G  P+ VT
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416

Query: 210 YTTLMKSCFRSRQYEHEFEIFSKMTKDMLSMALLTAQLLANFYMEQMIKNDVGIDMTFYN 269
           Y T++ +  +  + E   EI ++++    S  L+T                       YN
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT-----------------------YN 476

Query: 270 TFINFYCKEGKLEAAYKLLDEIESRGLECDDCTHSIITNGLCRVCNIEGAMLDRLIVQLD 329
           T I+   K GK   A KLLDE+ ++ L+ D  T+S +  GL R   ++ A        + 
Sbjct: 477 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA--------IK 536

Query: 330 CLNRWKQRILLPN----TSLVHNLCKARRFRRASKLLISRSRGGIKILKATQRAVIDDLC 389
             + +++  + PN     S++  LCK+R+  RA   L+     G K  + +   +I+ L 
Sbjct: 537 FFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLA 576

Query: 390 SSGFTSEARKL 397
             G   EA +L
Sbjct: 597 YEGMAKEALEL 576

[Close]

BLAST of IVF0025739 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 174.5 bits (441), Expect = 1.7e-43
Identity = 98/320 (30.63%), Postives = 167/320 (52.19%), Query Frame = 0


Query: 12  QMQKAELVIIDGTRIGVLPDVVTYNTLIDGYFRFSGMDAAYSVLYRMREAGISPDVITYN 71
           ++ +AE    +  R G+LPD V Y TLIDG+ +   + AA    Y M    I+PDV+TY 
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390

Query: 72  SLIAGATRNFSLEQSLDLFEEMIQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIILK 131
           ++I+G  +   + ++  LF EM   G+ PD  ++  L++ +   G   +A+RV   +I  
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450

Query: 132 DLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLRRHGFIPQLVTYNILINGLCKVSRLRAA 191
             SP+ VT+ T+I+GLCK G   +A  L   + + G  P + TYN ++NGLCK   +  A
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510

Query: 192 IRMLNEAIDSGLEPNAVTYTTLMKSCFRSRQYEHEFEIFSKMTKDMLSMALLTAQLLANF 251
           ++++ E   +GL  + VTYTTLM +  +S + +   EI  +M    L   ++T  +L N 
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570

Query: 252 Y------------MEQMIKNDVGIDMTFYNTFINFYCKEGKLEAAYKLLDEIESRGLECD 311
           +            +  M+   +  + T +N+ +  YC    L+AA  +  ++ SRG+  D
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630

Query: 312 DCTHSIITNGLCRVCNIEGA 320
             T+  +  G C+  N++ A
Sbjct: 631 GKTYENLVKGHCKARNMKEA 650

[Close]

BLAST of IVF0025739 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 174.5 bits (441), Expect = 1.7e-43
Identity = 98/320 (30.63%), Postives = 167/320 (52.19%), Query Frame = 0


Query: 12  QMQKAELVIIDGTRIGVLPDVVTYNTLIDGYFRFSGMDAAYSVLYRMREAGISPDVITYN 71
           ++ +AE    +  R G+LPD V Y TLIDG+ +   + AA    Y M    I+PDV+TY 
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390

Query: 72  SLIAGATRNFSLEQSLDLFEEMIQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIILK 131
           ++I+G  +   + ++  LF EM   G+ PD  ++  L++ +   G   +A+RV   +I  
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450

Query: 132 DLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLRRHGFIPQLVTYNILINGLCKVSRLRAA 191
             SP+ VT+ T+I+GLCK G   +A  L   + + G  P + TYN ++NGLCK   +  A
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510

Query: 192 IRMLNEAIDSGLEPNAVTYTTLMKSCFRSRQYEHEFEIFSKMTKDMLSMALLTAQLLANF 251
           ++++ E   +GL  + VTYTTLM +  +S + +   EI  +M    L   ++T  +L N 
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570

Query: 252 Y------------MEQMIKNDVGIDMTFYNTFINFYCKEGKLEAAYKLLDEIESRGLECD 311
           +            +  M+   +  + T +N+ +  YC    L+AA  +  ++ SRG+  D
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630

Query: 312 DCTHSIITNGLCRVCNIEGA 320
             T+  +  G C+  N++ A
Sbjct: 631 GKTYENLVKGHCKARNMKEA 650

[Close]

BLAST of IVF0025739 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 174.1 bits (440), Expect = 2.3e-43
Identity = 109/383 (28.46%), Postives = 190/383 (49.61%), Query Frame = 0


Query: 27  GVLPDVVTYNTLIDGYFRFS-GMDAAYSVLYRMREAGISPDVITYNSLIAGATRNFSLEQ 86
           G +P V++YN ++D   R    +  A +V   M E+ +SP+V TYN LI G     +++ 
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223

Query: 87  SLDLFEEMIQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIILKDLSPHPVTFNTMIN 146
           +L LF++M   G  P++ +YNTL+  +  L K D+ +++ + + LK L P+ +++N +IN
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283

Query: 147 GLCKHGYTSNAIMLFRNLRRHGFIPQLVTYNILINGLCKVSRLRAAIRMLNEAIDSGLEP 206
           GLC+ G       +   + R G+    VTYN LI G CK      A+ M  E +  GL P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343

Query: 207 NAVTYTTLMKSCFRSRQYEHEFEIFSKMTKDMLSMALLTAQLLANFY------------M 266
           + +TYT+L+ S  ++       E   +M    L     T   L + +            +
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403

Query: 267 EQMIKNDVGIDMTFYNTFINFYCKEGKLEAAYKLLDEIESRGLECDDCTHSIITNGLCRV 326
            +M  N     +  YN  IN +C  GK+E A  +L++++ +GL  D  ++S + +G CR 
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463

Query: 327 CNIEGAMLDRLIVQLDCLNRWKQRILLPNTSLVHNLCKARRFRRASKLLISRSRGGIKIL 386
            +++ A    L V+ + + +  +   +  +SL+   C+ RR + A  L     R G+   
Sbjct: 464 YDVDEA----LRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPD 523

Query: 387 KATQRAVIDDLCSSGFTSEARKL 397
           + T  A+I+  C  G   +A +L
Sbjct: 524 EFTYTALINAYCMEGDLEKALQL 542

The following BLAST results are available for this feature:

BLAST of IVF0025739 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C043	2.3e-88	44.11	Putative pentatricopeptide repeat-containing protein At4g17915 OS=Arabidopsis th...	[more]
Q56XR6	1.3e-83	42.03	Pentatricopeptide repeat-containing protein At5g46680 OS=Arabidopsis thaliana OX...	[more]
Q3EDF8	5.0e-43	29.38	Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX...	[more]
Q0WVK7	2.5e-42	30.63	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]
Q9FIX3	3.2e-42	28.46	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]

BLAST of IVF0025739 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYL3	1.3e-182	78.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G481190 PE=4 SV=1	[more]
A0A1S3B4M5	1.0e-176	78.19	putative pentatricopeptide repeat-containing protein At4g17915 OS=Cucumis melo O...	[more]
A0A5A7TEA6	1.9e-175	78.09	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A6J1D2P0	1.2e-161	71.46	putative pentatricopeptide repeat-containing protein At4g17915 OS=Momordica char...	[more]
A0A6J1IFW8	1.3e-158	70.77	putative pentatricopeptide repeat-containing protein At4g17915 isoform X1 OS=Cuc...	[more]

BLAST of IVF0025739 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442168.1	2.10e-221	78.19	PREDICTED: putative pentatricopeptide repeat-containing protein At4g17915 [Cucum...	[more]
XP_031740560.1	6.01e-221	77.96	putative pentatricopeptide repeat-containing protein At4g17915 [Cucumis sativus]...	[more]
KAA0041278.1	3.14e-220	78.09	putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] ...	[more]
XP_022147934.1	1.24e-201	71.46	putative pentatricopeptide repeat-containing protein At4g17915 [Momordica charan...	[more]
XP_022973869.1	1.11e-197	70.77	putative pentatricopeptide repeat-containing protein At4g17915 isoform X1 [Cucur...	[more]

BLAST of IVF0025739 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46680.1	9.2e-85	42.03	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G09900.1	3.5e-44	29.38	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G05670.1	1.7e-43	30.63	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G05670.2	1.7e-43	30.63	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT5G39710.1	2.3e-43	28.46	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 253..402 e-value: 7.7E-14 score: 53.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 7..114 e-value: 1.1E-27 score: 98.6 coord: 116..252 e-value: 2.0E-30 score: 107.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 138..184 e-value: 6.7E-15 score: 55.0 coord: 30..76 e-value: 1.5E-13 score: 50.7 coord: 267..312 e-value: 1.3E-13 score: 50.9
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 97..127 e-value: 1.0E-5 score: 25.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 194..238 e-value: 4.6E-6 score: 26.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 33..67 e-value: 1.8E-7 score: 28.9 coord: 268..299 e-value: 4.3E-8 score: 30.9 coord: 138..170 e-value: 1.2E-7 score: 29.5 coord: 208..235 e-value: 0.0018 score: 16.3 coord: 104..135 e-value: 5.0E-6 score: 24.4 coord: 68..102 e-value: 1.1E-6 score: 26.4 coord: 173..207 e-value: 3.6E-9 score: 34.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 206..240 score: 9.251395
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 101..135 score: 10.884628
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 264..298 score: 11.388848
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 136..170 score: 12.046526
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 31..65 score: 12.254791
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 66..100 score: 11.91499
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 171..205 score: 11.597113
None	No IPR available	PANTHER	PTHR47932:SF33	OS02G0793200 PROTEIN	coord: 11..320
None	No IPR available	PANTHER	PTHR47932	ATPASE EXPRESSION PROTEIN 3	coord: 342..402
None	No IPR available	PANTHER	PTHR47932:SF33	OS02G0793200 PROTEIN	coord: 342..402
None	No IPR available	PANTHER	PTHR47932	ATPASE EXPRESSION PROTEIN 3	coord: 11..320

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0025739.1	IVF0025739.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding