IVF0025553 (gene) Melon (IVF77) v1

Overview


Name	IVF0025553
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	protein transport protein yos1-like
Location	chr04: 31553428 .. 31553661 (-)
RNA-Seq Expression	IVF0025553
Synteny	IVF0025553

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGTTCTGGACCTTCTTTCAAGGGATTCTGCTGTTTACAAATGCCTTCGCAATTCTGAACGAAGATCGTTTTCTAGCTCGAAGAGGATGGACATTAGCAGAGATGTCGAGAGAAAGAAGAAGCACGCTCAAAGGCCAGGTAGTTGGGCTCATCCATGCATGTCAATTCTTGAGACTTCCACTCATTCTTTTCAATATCATCACCATCATCGTCAAGCTCTTCTCTGGTTGA

mRNA sequence

ATGTGGTTCTGGACCTTCTTTCAAGGGATTCTGCTGTTTACAAATGCCTTCGCAATTCTGAACGAAGATCGTTTTCTAGCTCGAAGAGGATGGACATTAGCAGAGATGTCGAGAGAAAGAAGAAGCACGCTCAAAGGCCAGGTAGTTGGGCTCATCCATGCATGTCAATTCTTGAGACTTCCACTCATTCTTTTCAATATCATCACCATCATCGTCAAGCTCTTCTCTGGTTGA

Coding sequence (CDS)

ATGTGGTTCTGGACCTTCTTTCAAGGGATTCTGCTGTTTACAAATGCCTTCGCAATTCTGAACGAAGATCGTTTTCTAGCTCGAAGAGGATGGACATTAGCAGAGATGTCGAGAGAAAGAAGAAGCACGCTCAAAGGCCAGGTAGTTGGGCTCATCCATGCATGTCAATTCTTGAGACTTCCACTCATTCTTTTCAATATCATCACCATCATCGTCAAGCTCTTCTCTGGTTGA

Protein sequence

MWFWTFFQGILLFTNAFAILNEDRFLARRGWTLAEMSRERRSTLKGQVVGLIHACQFLRLPLILFNIITIIVKLFSG

Homology

[Close]

BLAST of IVF0025553 vs. ExPASy Swiss-Prot
Match: O13825 (Protein transport protein yos1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=yos1 PE=3 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 3.3e-04
Identity = 30/70 (42.86%), Postives = 41/70 (58.57%), Query Frame = 0


Query: 11 LLFTNAFAILNEDRFLARRGW--TLAEMSRERRSTLKGQVVGLIHACQ-FLRLPLILFNI 70
          LL  NA AIL+EDRFL R GW  + A    +R+ T+K +++ LI A +  +  PLI  N 
Sbjct: 12 LLLLNAVAILSEDRFLGRIGWSQSAALGFGDRQDTIKSRILHLIRAIRTVMTFPLIAINT 71

Query: 71 ITIIVKLFSG 78
          I I+  L  G
Sbjct: 72 IVIVYNLVLG 81

[Close]

BLAST of IVF0025553 vs. ExPASy TrEMBL
Match: A0A1S3B5S0 (protein transport protein yos1-like OS=Cucumis melo OX=3656 GN=LOC103486333 PE=3 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.4e-34
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MWFWTFFQGILLFTNAFAILNEDRFLARRGWTLAEMSRERRSTLKGQVVGLIHACQFLRL 60
          MWFWTFFQGILLFTNAFAILNEDRFLARRGWTLAEMSRERRSTLKGQVVGLIHACQFLRL
Sbjct: 1  MWFWTFFQGILLFTNAFAILNEDRFLARRGWTLAEMSRERRSTLKGQVVGLIHACQFLRL 60

Query: 61 PLILFNIITIIVKLFSG 78
          PLILFNIITIIVKLFSG
Sbjct: 61 PLILFNIITIIVKLFSG 77

[Close]

BLAST of IVF0025553 vs. ExPASy TrEMBL
Match: A0A6J1J7W2 (protein transport protein yos1-like OS=Cucurbita maxima OX=3661 GN=LOC111482074 PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.4e-28
Identity = 65/77 (84.42%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 1  MWFWTFFQGILLFTNAFAILNEDRFLARRGWTLAEMSRERRSTLKGQVVGLIHACQFLRL 60
          M FWTF +G+LLF NAFAILNEDRFL+RRGWTLAEMSR RR+TLKGQV+GLIHACQFLRL
Sbjct: 1  MGFWTFLEGLLLFANAFAILNEDRFLSRRGWTLAEMSRGRRNTLKGQVIGLIHACQFLRL 60

Query: 61 PLILFNIITIIVKLFSG 78
          PLILFNII I++KLFSG
Sbjct: 61 PLILFNIIIIVIKLFSG 77

[Close]

BLAST of IVF0025553 vs. ExPASy TrEMBL
Match: A0A6J1F388 (protein transport protein yos1-like OS=Cucurbita moschata OX=3662 GN=LOC111441969 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.3e-27
Identity = 64/77 (83.12%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 1  MWFWTFFQGILLFTNAFAILNEDRFLARRGWTLAEMSRERRSTLKGQVVGLIHACQFLRL 60
          M FWTF +G+LLF NAFAILNEDRFL+RRGWTL EMSR RR+TLKGQV+GLIHACQFLRL
Sbjct: 1  MGFWTFLEGLLLFANAFAILNEDRFLSRRGWTLGEMSRGRRNTLKGQVIGLIHACQFLRL 60

Query: 61 PLILFNIITIIVKLFSG 78
          PLILFNII I++KLFSG
Sbjct: 61 PLILFNIIIIVIKLFSG 77

[Close]

BLAST of IVF0025553 vs. ExPASy TrEMBL
Match: A0A6J1CWU4 (protein transport protein yos1-like OS=Momordica charantia OX=3673 GN=LOC111015136 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-26
Identity = 62/77 (80.52%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 1  MWFWTFFQGILLFTNAFAILNEDRFLARRGWTLAEMSRERRSTLKGQVVGLIHACQFLRL 60
          M FW+  +G+LLF NA AILNEDRFL RRGWTLAEMSR+RR+TLKGQV+GLIHACQFLRL
Sbjct: 1  MGFWSLLEGLLLFANALAILNEDRFLGRRGWTLAEMSRDRRNTLKGQVIGLIHACQFLRL 60

Query: 61 PLILFNIITIIVKLFSG 78
          PLILFNII I++KLFSG
Sbjct: 61 PLILFNIIIIVIKLFSG 77

[Close]

BLAST of IVF0025553 vs. ExPASy TrEMBL
Match: A0A6J1FBJ2 (immediate early response 3-interacting protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111442599 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.9e-26
Identity = 63/77 (81.82%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 1  MWFWTFFQGILLFTNAFAILNEDRFLARRGWTLAEMSRERRSTLKGQVVGLIHACQFLRL 60
          M FWTF +G+LLF NAFAILNEDRFLARRGWTLA+M RE R++LK QV+GLIHACQFLRL
Sbjct: 1  MLFWTFLEGLLLFANAFAILNEDRFLARRGWTLADMPREGRNSLKAQVIGLIHACQFLRL 60

Query: 61 PLILFNIITIIVKLFSG 78
          PLILFNIITII+KL SG
Sbjct: 61 PLILFNIITIIIKLLSG 77

[Close]

BLAST of IVF0025553 vs. NCBI nr
Match: XP_008442479.1 (PREDICTED: protein transport protein yos1-like [Cucumis melo])

HSP 1 Score: 153 bits (386), Expect = 1.13e-46
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MWFWTFFQGILLFTNAFAILNEDRFLARRGWTLAEMSRERRSTLKGQVVGLIHACQFLRL 60
          MWFWTFFQGILLFTNAFAILNEDRFLARRGWTLAEMSRERRSTLKGQVVGLIHACQFLRL
Sbjct: 1  MWFWTFFQGILLFTNAFAILNEDRFLARRGWTLAEMSRERRSTLKGQVVGLIHACQFLRL 60

Query: 61 PLILFNIITIIVKLFSG 77
          PLILFNIITIIVKLFSG
Sbjct: 61 PLILFNIITIIVKLFSG 77

[Close]

BLAST of IVF0025553 vs. NCBI nr
Match: XP_004137742.1 (protein transport protein yos1-like [Cucumis sativus])

HSP 1 Score: 148 bits (374), Expect = 7.69e-45
Identity = 74/77 (96.10%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MWFWTFFQGILLFTNAFAILNEDRFLARRGWTLAEMSRERRSTLKGQVVGLIHACQFLRL 60
          MWFWTFFQGILLF NAFAILNEDRFLARRGWTLAEMSRERRSTLKGQV+GLIHACQFLRL
Sbjct: 1  MWFWTFFQGILLFANAFAILNEDRFLARRGWTLAEMSRERRSTLKGQVIGLIHACQFLRL 60

Query: 61 PLILFNIITIIVKLFSG 77
          PLIL NIITIIVKLFSG
Sbjct: 61 PLILLNIITIIVKLFSG 77

[Close]

BLAST of IVF0025553 vs. NCBI nr
Match: XP_038906232.1 (protein transport protein yos1-like [Benincasa hispida] >XP_038906233.1 protein transport protein yos1-like [Benincasa hispida])

HSP 1 Score: 137 bits (346), Expect = 1.44e-40
Identity = 68/77 (88.31%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 1  MWFWTFFQGILLFTNAFAILNEDRFLARRGWTLAEMSRERRSTLKGQVVGLIHACQFLRL 60
          M FWTF +G+LLF NAFAILNEDRFLARRGWTLAEMSRERR+TLKGQV+GLIHACQFLRL
Sbjct: 1  MGFWTFLEGLLLFANAFAILNEDRFLARRGWTLAEMSRERRNTLKGQVIGLIHACQFLRL 60

Query: 61 PLILFNIITIIVKLFSG 77
          PLILFNII II+KLFSG
Sbjct: 61 PLILFNIIIIIIKLFSG 77

[Close]

BLAST of IVF0025553 vs. NCBI nr
Match: XP_022983483.1 (protein transport protein yos1-like [Cucurbita maxima] >XP_022983485.1 protein transport protein yos1-like [Cucurbita maxima])

HSP 1 Score: 133 bits (335), Expect = 6.88e-39
Identity = 65/77 (84.42%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 1  MWFWTFFQGILLFTNAFAILNEDRFLARRGWTLAEMSRERRSTLKGQVVGLIHACQFLRL 60
          M FWTF +G+LLF NAFAILNEDRFL+RRGWTLAEMSR RR+TLKGQV+GLIHACQFLRL
Sbjct: 1  MGFWTFLEGLLLFANAFAILNEDRFLSRRGWTLAEMSRGRRNTLKGQVIGLIHACQFLRL 60

Query: 61 PLILFNIITIIVKLFSG 77
          PLILFNII I++KLFSG
Sbjct: 61 PLILFNIIIIVIKLFSG 77

[Close]

BLAST of IVF0025553 vs. NCBI nr
Match: XP_022934956.1 (protein transport protein yos1-like [Cucurbita moschata] >XP_023527548.1 protein transport protein yos1-like [Cucurbita pepo subsp. pepo] >XP_023527549.1 protein transport protein yos1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 132 bits (331), Expect = 2.81e-38
Identity = 64/77 (83.12%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 1  MWFWTFFQGILLFTNAFAILNEDRFLARRGWTLAEMSRERRSTLKGQVVGLIHACQFLRL 60
          M FWTF +G+LLF NAFAILNEDRFL+RRGWTL EMSR RR+TLKGQV+GLIHACQFLRL
Sbjct: 1  MGFWTFLEGLLLFANAFAILNEDRFLSRRGWTLGEMSRGRRNTLKGQVIGLIHACQFLRL 60

Query: 61 PLILFNIITIIVKLFSG 77
          PLILFNII I++KLFSG
Sbjct: 61 PLILFNIIIIVIKLFSG 77

[Close]

BLAST of IVF0025553 vs. TAIR 10
Match: AT2G37975.1 (Yos1-like protein )

HSP 1 Score: 107.1 bits (266), Expect = 6.5e-24
Identity = 51/78 (65.38%), Postives = 66/78 (84.62%), Query Frame = 0


Query: 1  MWFWTFFQGILLFTNAFAILNEDRFLARRGWTLAEMSRE-RRSTLKGQVVGLIHACQFLR 60
          M FWT  +G+LLF NA AILNEDRFLA +GWTLAE+ +  +R++LKGQ++GLIHAC ++R
Sbjct: 1  MGFWTLMEGLLLFANALAILNEDRFLAPKGWTLAELHQTGKRNSLKGQIIGLIHACHYMR 60

Query: 61 LPLILFNIITIIVKLFSG 78
          LPL+LFN+I I+ KLFSG
Sbjct: 61 LPLMLFNLIVIVFKLFSG 78

[Close]

BLAST of IVF0025553 vs. TAIR 10
Match: AT3G54085.1 (Yos1-like protein )

HSP 1 Score: 99.4 bits (246), Expect = 1.4e-21
Identity = 48/78 (61.54%), Postives = 62/78 (79.49%), Query Frame = 0


Query: 1  MWFWTFFQGILLFTNAFAILNEDRFLARRGWTLAEMSR-ERRSTLKGQVVGLIHACQFLR 60
          M FWT  +G+LLF NA AILNEDRFL  RGWTL E+ + +RR++ KGQ++GLIHACQ++R
Sbjct: 1  MGFWTLLKGLLLFANALAILNEDRFLVPRGWTLGELHQTDRRNSPKGQIIGLIHACQYMR 60

Query: 61 LPLILFNIITIIVKLFSG 78
          LPL+L N   I++KL SG
Sbjct: 61 LPLMLINTAVIVLKLISG 78

[Close]

BLAST of IVF0025553 vs. TAIR 10
Match: AT3G54085.2 (Yos1-like protein )

HSP 1 Score: 99.4 bits (246), Expect = 1.4e-21
Identity = 48/78 (61.54%), Postives = 62/78 (79.49%), Query Frame = 0


Query: 1  MWFWTFFQGILLFTNAFAILNEDRFLARRGWTLAEMSR-ERRSTLKGQVVGLIHACQFLR 60
          M FWT  +G+LLF NA AILNEDRFL  RGWTL E+ + +RR++ KGQ++GLIHACQ++R
Sbjct: 1  MGFWTLLKGLLLFANALAILNEDRFLVPRGWTLGELHQTDRRNSPKGQIIGLIHACQYMR 60

Query: 61 LPLILFNIITIIVKLFSG 78
          LPL+L N   I++KL SG
Sbjct: 61 LPLMLINTAVIVLKLISG 78

The following BLAST results are available for this feature:

BLAST of IVF0025553 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O13825	3.3e-04	42.86	Protein transport protein yos1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2...	[more]

BLAST of IVF0025553 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B5S0	5.4e-34	100.00	protein transport protein yos1-like OS=Cucumis melo OX=3656 GN=LOC103486333 PE=3...	[more]
A0A6J1J7W2	4.4e-28	84.42	protein transport protein yos1-like OS=Cucurbita maxima OX=3661 GN=LOC111482074 ...	[more]
A0A6J1F388	1.3e-27	83.12	protein transport protein yos1-like OS=Cucurbita moschata OX=3662 GN=LOC11144196...	[more]
A0A6J1CWU4	1.4e-26	80.52	protein transport protein yos1-like OS=Momordica charantia OX=3673 GN=LOC1110151...	[more]
A0A6J1FBJ2	1.9e-26	81.82	immediate early response 3-interacting protein 1-like OS=Cucurbita moschata OX=3...	[more]

BLAST of IVF0025553 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442479.1	1.13e-46	100.00	PREDICTED: protein transport protein yos1-like [Cucumis melo]	[more]
XP_004137742.1	7.69e-45	96.10	protein transport protein yos1-like [Cucumis sativus]	[more]
XP_038906232.1	1.44e-40	88.31	protein transport protein yos1-like [Benincasa hispida] >XP_038906233.1 protein ...	[more]
XP_022983483.1	6.88e-39	84.42	protein transport protein yos1-like [Cucurbita maxima] >XP_022983485.1 protein t...	[more]
XP_022934956.1	2.81e-38	83.12	protein transport protein yos1-like [Cucurbita moschata] >XP_023527548.1 protein...	[more]

BLAST of IVF0025553 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37975.1	6.5e-24	65.38	Yos1-like protein	[more]
AT3G54085.1	1.4e-21	61.54	Yos1-like protein	[more]
AT3G54085.2	1.4e-21	61.54	Yos1-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013880	Yos1-like	PFAM	PF08571	Yos1	coord: 3..77 e-value: 7.1E-23 score: 80.7
IPR013880	Yos1-like	PANTHER	PTHR15858	UNCHARACTERIZED	coord: 1..77
None	No IPR available	PANTHER	PTHR15858:SF2	YOS1-LIKE PROTEIN	coord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0025553.2	IVF0025553.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0015031	protein transport
cellular_component	GO:0030134	COPII-coated ER to Golgi transport vesicle
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0030173	integral component of Golgi membrane