IVF0025413 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAACAGATGTTGGAAACCAGTACTGACTGGATGGGAATCACCCTCCATTAAAGATGCTGCTGGAAAAACTACTCTGAAGCCTGAGATCACCTGGACAAAGGAAGAAGATGAAGAATCACTAGAAAACTGGAGGTCTCTAAATGCATTGTTCAATGGTGTGGACTAG ATGGATAACAGATGTTGGAAACCAGTACTGACTGGATGGGAATCACCCTCCATTAAAGATGCTGCTGGAAAAACTACTCTGAAGCCTGAGATCACCTGGACAAAGGAAGAAGATGAAGAATCACTAGAAAACTGGAGGTCTCTAAATGCATTGTTCAATGGTGTGGACTAG ATGGATAACAGATGTTGGAAACCAGTACTGACTGGATGGGAATCACCCTCCATTAAAGATGCTGCTGGAAAAACTACTCTGAAGCCTGAGATCACCTGGACAAAGGAAGAAGATGAAGAATCACTAGAAAACTGGAGGTCTCTAAATGCATTGTTCAATGGTGTGGACTAG MDNRCWKPVLTGWESPSIKDAAGKTTLKPEITWTKEEDEESLENWRSLNALFNGVD Homology
BLAST of IVF0025413 vs. ExPASy TrEMBL
Match: A0A5D3D805 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00680 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.1e-25 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of IVF0025413 vs. ExPASy TrEMBL
Match: A0A5A7TDV3 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold93G00470 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.1e-25 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of IVF0025413 vs. ExPASy TrEMBL
Match: A0A5D3CDY8 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold404G00030 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.6e-17 Identity = 45/56 (80.36%), Postives = 50/56 (89.29%), Query Frame = 0
BLAST of IVF0025413 vs. ExPASy TrEMBL
Match: A0A5D3C137 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00680 PE=4 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 2.8e-16 Identity = 42/56 (75.00%), Postives = 48/56 (85.71%), Query Frame = 0
BLAST of IVF0025413 vs. ExPASy TrEMBL
Match: A0A5D3DVE7 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00330 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 4.1e-15 Identity = 41/53 (77.36%), Postives = 44/53 (83.02%), Query Frame = 0
BLAST of IVF0025413 vs. NCBI nr
Match: TYK19674.1 (gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 125 bits (313), Expect = 4.38e-36 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of IVF0025413 vs. NCBI nr
Match: KAA0041582.1 (gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 125 bits (313), Expect = 4.80e-35 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of IVF0025413 vs. NCBI nr
Match: KAA0038855.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK09428.1 gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 97.4 bits (241), Expect = 2.43e-23 Identity = 45/55 (81.82%), Postives = 49/55 (89.09%), Query Frame = 0
BLAST of IVF0025413 vs. NCBI nr
Match: KAA0047417.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK04126.1 gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 94.0 bits (232), Expect = 1.43e-21 Identity = 42/56 (75.00%), Postives = 48/56 (85.71%), Query Frame = 0
BLAST of IVF0025413 vs. NCBI nr
Match: TYK27701.1 (gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 90.9 bits (224), Expect = 3.46e-21 Identity = 41/55 (74.55%), Postives = 45/55 (81.82%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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