IVF0025048 (gene) Melon (IVF77) v1

Overview
NameIVF0025048
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSerine/threonine-protein phosphatase 7 long form-like protein isoform X1
Locationchr12: 15546104 .. 15546283 (+)
RNA-Seq ExpressionIVF0025048
SyntenyIVF0025048
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGTTGATTCCATCCAATCCAACACCCACACTATTGGCCTGAGTTATCATTCACTAAAGTTTGCCCAAATGCGGACTTACTTAAAGGACTCGGTCGATCAACAGCTACCAGGATCCATAATGAAATGGATTGAAAAGAGTTTGGTCAATCACTTAGATGCACTCTCTATAAAGTAG

mRNA sequence

ATGTTGGTTGATTCCATCCAATCCAACACCCACACTATTGGCCTGAGTTATCATTCACTAAAGTTTGCCCAAATGCGGACTTACTTAAAGGACTCGGTCGATCAACAGCTACCAGGATCCATAATGAAATGGATTGAAAAGAGTTTGGTCAATCACTTAGATGCACTCTCTATAAAGTAG

Coding sequence (CDS)

ATGTTGGTTGATTCCATCCAATCCAACACCCACACTATTGGCCTGAGTTATCATTCACTAAAGTTTGCCCAAATGCGGACTTACTTAAAGGACTCGGTCGATCAACAGCTACCAGGATCCATAATGAAATGGATTGAAAAGAGTTTGGTCAATCACTTAGATGCACTCTCTATAAAGTAG

Protein sequence

MLVDSIQSNTHTIGLSYHSLKFAQMRTYLKDSVDQQLPGSIMKWIEKSLVNHLDALSIK
Homology
BLAST of IVF0025048 vs. ExPASy TrEMBL
Match: A0A5A7T0Q1 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002710 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.2e-18
Identity = 49/57 (85.96%), Postives = 51/57 (89.47%), Query Frame = 0

Query: 1   MLVDSIQSNTHTIGLSYHSLKFAQMRTYLKDSVDQQLPGSIMKWIEKSLVNHLDALS 58
           M VD IQSNT TIGLSYHSLKFAQMRTYLKD +DQ+LPGSIMKWI KSLVNH DALS
Sbjct: 64  MSVDYIQSNTQTIGLSYHSLKFAQMRTYLKDLIDQELPGSIMKWIGKSLVNHSDALS 120

BLAST of IVF0025048 vs. ExPASy TrEMBL
Match: A0A5D3CWN0 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00530 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.7e-16
Identity = 47/59 (79.66%), Postives = 51/59 (86.44%), Query Frame = 0

Query: 1  MLVDSIQSNTHTIGLSYHSLKFAQMRTYLKDSVDQQLPGSIMKWIEKSLVNHLDALSIK 60
          M VDSIQSNT TIGLSYHS KFA+MRTYLKD VDQ+LP SIMKWI KS++NH DALS K
Sbjct: 1  MPVDSIQSNTQTIGLSYHSPKFARMRTYLKDPVDQELPESIMKWIGKSMINHSDALSGK 59

BLAST of IVF0025048 vs. ExPASy TrEMBL
Match: A0A5D3BUF5 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001440 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 9.6e-15
Identity = 45/59 (76.27%), Postives = 49/59 (83.05%), Query Frame = 0

Query: 1  MLVDSIQSNTHTIGLSYHSLKFAQMRTYLKDSVDQQLPGSIMKWIEKSLVNHLDALSIK 60
          M VDSIQSNT  IGLS HS KFAQM+TYLKD VD++  GSIMKWI KSLVNH DALS+K
Sbjct: 1  MPVDSIQSNTQIIGLSCHSPKFAQMQTYLKDPVDREQQGSIMKWIGKSLVNHSDALSVK 59

BLAST of IVF0025048 vs. ExPASy TrEMBL
Match: A0A5A7TI34 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G00540 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 9.6e-15
Identity = 45/59 (76.27%), Postives = 49/59 (83.05%), Query Frame = 0

Query: 1   MLVDSIQSNTHTIGLSYHSLKFAQMRTYLKDSVDQQLPGSIMKWIEKSLVNHLDALSIK 60
           M VDSIQSNT  IGLS HS KFAQM+TYLKD VD++  GSIMKWI KSLVNH DALS+K
Sbjct: 354 MPVDSIQSNTQIIGLSCHSPKFAQMQTYLKDPVDREQQGSIMKWIGKSLVNHSDALSVK 412

BLAST of IVF0025048 vs. ExPASy TrEMBL
Match: A0A5A7SNK7 (Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00830 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 9.6e-15
Identity = 45/59 (76.27%), Postives = 49/59 (83.05%), Query Frame = 0

Query: 1   MLVDSIQSNTHTIGLSYHSLKFAQMRTYLKDSVDQQLPGSIMKWIEKSLVNHLDALSIK 60
           M VDSIQSNT  IGLS HS KFAQM+TYLKD VD++  GSIMKWI KSLVNH DALS+K
Sbjct: 117 MPVDSIQSNTQIIGLSCHSPKFAQMQTYLKDPVDREQQGSIMKWIGKSLVNHSDALSVK 175

BLAST of IVF0025048 vs. NCBI nr
Match: KAA0035171.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 100 bits (249), Expect = 2.29e-23
Identity = 49/57 (85.96%), Postives = 51/57 (89.47%), Query Frame = 0

Query: 1   MLVDSIQSNTHTIGLSYHSLKFAQMRTYLKDSVDQQLPGSIMKWIEKSLVNHLDALS 57
           M VD IQSNT TIGLSYHSLKFAQMRTYLKD +DQ+LPGSIMKWI KSLVNH DALS
Sbjct: 64  MSVDYIQSNTQTIGLSYHSLKFAQMRTYLKDLIDQELPGSIMKWIGKSLVNHSDALS 120

BLAST of IVF0025048 vs. NCBI nr
Match: TYK15875.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 95.1 bits (235), Expect = 3.73e-22
Identity = 47/59 (79.66%), Postives = 51/59 (86.44%), Query Frame = 0

Query: 1  MLVDSIQSNTHTIGLSYHSLKFAQMRTYLKDSVDQQLPGSIMKWIEKSLVNHLDALSIK 59
          M VDSIQSNT TIGLSYHS KFA+MRTYLKD VDQ+LP SIMKWI KS++NH DALS K
Sbjct: 1  MPVDSIQSNTQTIGLSYHSPKFARMRTYLKDPVDQELPESIMKWIGKSMINHSDALSGK 59

BLAST of IVF0025048 vs. NCBI nr
Match: TYK03303.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa] >TYK12342.1 serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 89.4 bits (220), Expect = 6.58e-19
Identity = 45/59 (76.27%), Postives = 49/59 (83.05%), Query Frame = 0

Query: 1  MLVDSIQSNTHTIGLSYHSLKFAQMRTYLKDSVDQQLPGSIMKWIEKSLVNHLDALSIK 59
          M VDSIQSNT  IGLS HS KFAQM+TYLKD VD++  GSIMKWI KSLVNH DALS+K
Sbjct: 1  MPVDSIQSNTQIIGLSCHSPKFAQMQTYLKDPVDREQQGSIMKWIGKSLVNHSDALSVK 59

BLAST of IVF0025048 vs. NCBI nr
Match: KAA0031833.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 89.4 bits (220), Expect = 6.66e-19
Identity = 45/59 (76.27%), Postives = 49/59 (83.05%), Query Frame = 0

Query: 1   MLVDSIQSNTHTIGLSYHSLKFAQMRTYLKDSVDQQLPGSIMKWIEKSLVNHLDALSIK 59
           M VDSIQSNT  IGLS HS KFAQM+TYLKD VD++  GSIMKWI KSLVNH DALS+K
Sbjct: 117 MPVDSIQSNTQIIGLSCHSPKFAQMQTYLKDPVDREQQGSIMKWIGKSLVNHSDALSVK 175

BLAST of IVF0025048 vs. NCBI nr
Match: KAA0042980.1 (serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 89.4 bits (220), Expect = 6.70e-19
Identity = 45/59 (76.27%), Postives = 49/59 (83.05%), Query Frame = 0

Query: 1   MLVDSIQSNTHTIGLSYHSLKFAQMRTYLKDSVDQQLPGSIMKWIEKSLVNHLDALSIK 59
           M VDSIQSNT  IGLS HS KFAQM+TYLKD VD++  GSIMKWI KSLVNH DALS+K
Sbjct: 354 MPVDSIQSNTQIIGLSCHSPKFAQMQTYLKDPVDREQQGSIMKWIGKSLVNHSDALSVK 412

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7T0Q13.2e-1885.96Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5D3CWN01.7e-1679.66Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... [more]
A0A5D3BUF59.6e-1576.27Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu... [more]
A0A5A7TI349.6e-1576.27Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu... [more]
A0A5A7SNK79.6e-1576.27Serine/threonine-protein phosphatase 7 long form-like protein isoform X1 OS=Cucu... [more]
Match NameE-valueIdentityDescription
KAA0035171.12.29e-2385.96serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
TYK15875.13.73e-2279.66serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... [more]
TYK03303.16.58e-1976.27serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi... [more]
KAA0031833.16.66e-1976.27serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi... [more]
KAA0042980.16.70e-1976.27serine/threonine-protein phosphatase 7 long form-like protein isoform X1 [Cucumi... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0025048.1IVF0025048.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010073 meristem maintenance