Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTTAACTCAACCTTCTACTGATGACGAGGAGAATGAAGGAGAAGCTCTTCATTTGAGAGAGAAAGAGATTAGGGAAACATCACCTCTTCCTGACCCACTTCCTGAGGAAGCTACTACTCCACTTCCATCTTCACATGTTAATGCAACCATTCATCCACAGTCTAAAAGACCACCAAATAGGCCGTTAGACTCACCTGCTGGTCGTACTAGATCAGCTGTTCGTAAATTACCCGTTGAAGAGGTTGAATCTCAGTTGGAAGAAAATGAAAATGTGGATTGTGAGGAAGTTCATACGAAGGAACCAAGTCCCAAAAAGACTAGAGGTCGTACGAAGATGCAAACAATAGCTATGGAGCCAGAAATGAAACTAGATATAAGGTACAATGGATATGGACAACCTATTGGAGAAACATCAGTTGGGTTGTCCTCATTCTTGGGTACATTAGTCAGAGAAGTGGTGCCAGTGAATGTTGAAACTTGGAAGAAAATTTCAACGAGACAAAAAGAAATATTGTGGCATTCTATTCAAGTATGTAATTTATAG
mRNA sequence
ATGGACTTAACTCAACCTTCTACTGATGACGAGGAGAATGAAGGAGAAGCTCTTCATTTGAGAGAGAAAGAGATTAGGGAAACATCACCTCTTCCTGACCCACTTCCTGAGGAAGCTACTACTCCACTTCCATCTTCACATGTTAATGCAACCATTCATCCACAGTCTAAAAGACCACCAAATAGGCCGTTAGACTCACCTGCTGGTCGTACTAGATCAGCTGTTCGTAAATTACCCGTTGAAGAGGTTGAATCTCAGTTGGAAGAAAATGAAAATGTGGATTGTGAGGAAGTTCATACGAAGGAACCAAGTCCCAAAAAGACTAGAGGTCGTACGAAGATGCAAACAATAGCTATGGAGCCAGAAATGAAACTAGATATAAGGTACAATGGATATGGACAACCTATTGGAGAAACATCAGTTGGGTTGTCCTCATTCTTGGGTACATTAGTCAGAGAAGTGGTGCCAGTGAATGTTGAAACTTGGAAGAAAATTTCAACGAGACAAAAAGAAATATTGTGGCATTCTATTCAAGTATGTAATTTATAG
Coding sequence (CDS)
ATGGACTTAACTCAACCTTCTACTGATGACGAGGAGAATGAAGGAGAAGCTCTTCATTTGAGAGAGAAAGAGATTAGGGAAACATCACCTCTTCCTGACCCACTTCCTGAGGAAGCTACTACTCCACTTCCATCTTCACATGTTAATGCAACCATTCATCCACAGTCTAAAAGACCACCAAATAGGCCGTTAGACTCACCTGCTGGTCGTACTAGATCAGCTGTTCGTAAATTACCCGTTGAAGAGGTTGAATCTCAGTTGGAAGAAAATGAAAATGTGGATTGTGAGGAAGTTCATACGAAGGAACCAAGTCCCAAAAAGACTAGAGGTCGTACGAAGATGCAAACAATAGCTATGGAGCCAGAAATGAAACTAGATATAAGGTACAATGGATATGGACAACCTATTGGAGAAACATCAGTTGGGTTGTCCTCATTCTTGGGTACATTAGTCAGAGAAGTGGTGCCAGTGAATGTTGAAACTTGGAAGAAAATTTCAACGAGACAAAAAGAAATATTGTGGCATTCTATTCAAGTATGTAATTTATAG
Protein sequence
MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQVCNL
Homology
BLAST of IVF0024821 vs. ExPASy TrEMBL
Match:
A0A5A7UBP2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G00210 PE=4 SV=1)
HSP 1 Score: 350.1 bits (897), Expect = 5.4e-93
Identity = 177/178 (99.44%), Postives = 178/178 (100.00%), Query Frame = 0
Query: 1 MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60
MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQS+RPP
Sbjct: 1 MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSRRPP 60
Query: 61 NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME
Sbjct: 61 NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
Query: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 179
PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ
Sbjct: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178
BLAST of IVF0024821 vs. ExPASy TrEMBL
Match:
A0A5A7SRN7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00120 PE=4 SV=1)
HSP 1 Score: 350.1 bits (897), Expect = 5.4e-93
Identity = 177/178 (99.44%), Postives = 178/178 (100.00%), Query Frame = 0
Query: 1 MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60
MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQS+RPP
Sbjct: 1 MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSRRPP 60
Query: 61 NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME
Sbjct: 61 NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
Query: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 179
PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ
Sbjct: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178
BLAST of IVF0024821 vs. ExPASy TrEMBL
Match:
A0A5A7TIU1 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002550 PE=4 SV=1)
HSP 1 Score: 347.8 bits (891), Expect = 2.7e-92
Identity = 176/178 (98.88%), Postives = 177/178 (99.44%), Query Frame = 0
Query: 1 MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60
MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP
Sbjct: 1 MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60
Query: 61 NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
NRPLDSPAG TRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME
Sbjct: 61 NRPLDSPAGCTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
Query: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 179
PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVN+ETWKKISTRQKEILWHSIQ
Sbjct: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNIETWKKISTRQKEILWHSIQ 178
BLAST of IVF0024821 vs. ExPASy TrEMBL
Match:
A0A5A7TLJ2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003690 PE=4 SV=1)
HSP 1 Score: 345.1 bits (884), Expect = 1.8e-91
Identity = 174/178 (97.75%), Postives = 176/178 (98.88%), Query Frame = 0
Query: 1 MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60
MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQS++PP
Sbjct: 1 MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSRKPP 60
Query: 61 NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
NRPLDSPAGRTR VRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME
Sbjct: 61 NRPLDSPAGRTRLVVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
Query: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 179
PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ
Sbjct: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178
BLAST of IVF0024821 vs. ExPASy TrEMBL
Match:
A0A5A7UNU1 (Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00350 PE=4 SV=1)
HSP 1 Score: 339.3 bits (869), Expect = 9.6e-90
Identity = 174/182 (95.60%), Postives = 176/182 (96.70%), Query Frame = 0
Query: 1 MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60
MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPL EEATTPLPSSHVNATIHPQS+RPP
Sbjct: 1 MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLLEEATTPLPSSHVNATIHPQSRRPP 60
Query: 61 NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
NRPLDSPAGRTRSAVRKL VEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME
Sbjct: 61 NRPLDSPAGRTRSAVRKLLVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
Query: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQVC 180
PEMKLDIRYNGYGQPIGETSVGLSSFLGTL REVVPVNV TWKKISTRQKEILWHSIQ+
Sbjct: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLFREVVPVNVATWKKISTRQKEILWHSIQMG 180
Query: 181 NL 183
L
Sbjct: 181 GL 182
BLAST of IVF0024821 vs. NCBI nr
Match:
KAA0041269.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 350 bits (897), Expect = 8.66e-120
Identity = 176/178 (98.88%), Postives = 177/178 (99.44%), Query Frame = 0
Query: 1 MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60
MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP
Sbjct: 1 MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60
Query: 61 NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
NRPLDSPAG TRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME
Sbjct: 61 NRPLDSPAGCTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
Query: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178
PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVN+ETWKKISTRQKEILWHSIQ
Sbjct: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNIETWKKISTRQKEILWHSIQ 178
BLAST of IVF0024821 vs. NCBI nr
Match:
KAA0051001.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 352 bits (903), Expect = 8.19e-118
Identity = 177/178 (99.44%), Postives = 178/178 (100.00%), Query Frame = 0
Query: 1 MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60
MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQS+RPP
Sbjct: 1 MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSRRPP 60
Query: 61 NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME
Sbjct: 61 NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
Query: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178
PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ
Sbjct: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178
BLAST of IVF0024821 vs. NCBI nr
Match:
KAA0032201.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 352 bits (903), Expect = 2.32e-117
Identity = 177/178 (99.44%), Postives = 178/178 (100.00%), Query Frame = 0
Query: 1 MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60
MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQS+RPP
Sbjct: 1 MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSRRPP 60
Query: 61 NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME
Sbjct: 61 NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
Query: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178
PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ
Sbjct: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178
BLAST of IVF0024821 vs. NCBI nr
Match:
KAA0042856.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 347 bits (890), Expect = 2.45e-114
Identity = 174/178 (97.75%), Postives = 176/178 (98.88%), Query Frame = 0
Query: 1 MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60
MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQS++PP
Sbjct: 1 MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSRKPP 60
Query: 61 NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
NRPLDSPAGRTR VRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME
Sbjct: 61 NRPLDSPAGRTRLVVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
Query: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178
PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ
Sbjct: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQ 178
BLAST of IVF0024821 vs. NCBI nr
Match:
KAA0056267.1 (uncharacterized protein E6C27_scaffold226G00350 [Cucumis melo var. makuwa])
HSP 1 Score: 341 bits (874), Expect = 3.18e-114
Identity = 174/182 (95.60%), Postives = 176/182 (96.70%), Query Frame = 0
Query: 1 MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLPEEATTPLPSSHVNATIHPQSKRPP 60
MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPL EEATTPLPSSHVNATIHPQS+RPP
Sbjct: 1 MDLTQPSTDDEENEGEALHLREKEIRETSPLPDPLLEEATTPLPSSHVNATIHPQSRRPP 60
Query: 61 NRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
NRPLDSPAGRTRSAVRKL VEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME
Sbjct: 61 NRPLDSPAGRTRSAVRKLLVEEVESQLEENENVDCEEVHTKEPSPKKTRGRTKMQTIAME 120
Query: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVVPVNVETWKKISTRQKEILWHSIQVC 180
PEMKLDIRYNGYGQPIGETSVGLSSFLGTL REVVPVNV TWKKISTRQKEILWHSIQ+
Sbjct: 121 PEMKLDIRYNGYGQPIGETSVGLSSFLGTLFREVVPVNVATWKKISTRQKEILWHSIQMG 180
Query: 181 NL 182
L
Sbjct: 181 GL 182
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7UBP2 | 5.4e-93 | 99.44 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G0... | [more] |
A0A5A7SRN7 | 5.4e-93 | 99.44 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00... | [more] |
A0A5A7TIU1 | 2.7e-92 | 98.88 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00... | [more] |
A0A5A7TLJ2 | 1.8e-91 | 97.75 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003... | [more] |
A0A5A7UNU1 | 9.6e-90 | 95.60 | Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
Match Name | E-value | Identity | Description | |
KAA0041269.1 | 8.66e-120 | 98.88 | Plant transposase [Cucumis melo var. makuwa] | [more] |
KAA0051001.1 | 8.19e-118 | 99.44 | Plant transposase [Cucumis melo var. makuwa] | [more] |
KAA0032201.1 | 2.32e-117 | 99.44 | Plant transposase [Cucumis melo var. makuwa] | [more] |
KAA0042856.1 | 2.45e-114 | 97.75 | Plant transposase [Cucumis melo var. makuwa] | [more] |
KAA0056267.1 | 3.18e-114 | 95.60 | uncharacterized protein E6C27_scaffold226G00350 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |