IVF0024796 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGACTGAGATTTTAAGACCTCAGGATTGTTTGATCGAAAGGATCAGAGTTCCACCGGCAGCGTTTTGTCGTCGGAGGAGTTCTTATGGAAACTATGATTCCAATATTTGTAACAACTATAATCCTAGATCTAACAGGAAGTCGGTGGCTCGTTCGGAGCGTTCGGAGCGGCCGGAGCAGCGGAAGAGATTTGTTCCGAATCATTCAGAGCCGTCGGTCTCAAAGAGATCGAGTTCCGACGATTTGAAGGCGATGAAAAATAGTTTGGTGATGGAAAAGGTTACGATCTTGAGGCGAGGTGAATCTCTTGATTCGAAGATCAAGAGCGAAGCACTGAAGAAGGAAGGTGATAATATTGTCGTGTGTGGAACCGATAGGTTGGGACCGGCGCCGGAAACGGTTGCGAAGCAAATCCGGATCGTCGACGTGAGGTGTCCGATAGCCGGAAAAGCCGATGTGTACGCCGGATCGGCGTTTTCGATGTCGCCGTCTCCTAGTTCTCTTCCATTACCATCGTTTTCGAAGAAGAAACACGTATCCACCATCGTTGACGACTCGGCTACCAGAGATCTGAGGCGTTTGCTTCGGCTCGACGCATGA ATGGGGACTGAGATTTTAAGACCTCAGGATTGTTTGATCGAAAGGATCAGAGTTCCACCGGCAGCGTTTTGTCGTCGGAGGAGTTCTTATGGAAACTATGATTCCAATATTTGTAACAACTATAATCCTAGATCTAACAGGAAGTCGGTGGCTCGTTCGGAGCGTTCGGAGCGGCCGGAGCAGCGGAAGAGATTTGTTCCGAATCATTCAGAGCCGTCGGTCTCAAAGAGATCGAGTTCCGACGATTTGAAGGCGATGAAAAATAGTTTGGTGATGGAAAAGGTTACGATCTTGAGGCGAGGTGAATCTCTTGATTCGAAGATCAAGAGCGAAGCACTGAAGAAGGAAGGTGATAATATTGTCGTGTGTGGAACCGATAGGTTGGGACCGGCGCCGGAAACGGTTGCGAAGCAAATCCGGATCGTCGACGTGAGGTGTCCGATAGCCGGAAAAGCCGATGTGTACGCCGGATCGGCGTTTTCGATGTCGCCGTCTCCTAGTTCTCTTCCATTACCATCGTTTTCGAAGAAGAAACACGTATCCACCATCGTTGACGACTCGGCTACCAGAGATCTGAGGCGTTTGCTTCGGCTCGACGCATGA ATGGGGACTGAGATTTTAAGACCTCAGGATTGTTTGATCGAAAGGATCAGAGTTCCACCGGCAGCGTTTTGTCGTCGGAGGAGTTCTTATGGAAACTATGATTCCAATATTTGTAACAACTATAATCCTAGATCTAACAGGAAGTCGGTGGCTCGTTCGGAGCGTTCGGAGCGGCCGGAGCAGCGGAAGAGATTTGTTCCGAATCATTCAGAGCCGTCGGTCTCAAAGAGATCGAGTTCCGACGATTTGAAGGCGATGAAAAATAGTTTGGTGATGGAAAAGGTTACGATCTTGAGGCGAGGTGAATCTCTTGATTCGAAGATCAAGAGCGAAGCACTGAAGAAGGAAGGTGATAATATTGTCGTGTGTGGAACCGATAGGTTGGGACCGGCGCCGGAAACGGTTGCGAAGCAAATCCGGATCGTCGACGTGAGGTGTCCGATAGCCGGAAAAGCCGATGTGTACGCCGGATCGGCGTTTTCGATGTCGCCGTCTCCTAGTTCTCTTCCATTACCATCGTTTTCGAAGAAGAAACACGTATCCACCATCGTTGACGACTCGGCTACCAGAGATCTGAGGCGTTTGCTTCGGCTCGACGCATGA MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNICNNYNPRSNRKSVARSERSERPEQRKRFVPNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNIVVCGTDRLGPAPETVAKQIRIVDVRCPIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHVSTIVDDSATRDLRRLLRLDA Homology
BLAST of IVF0024796 vs. ExPASy TrEMBL
Match: A0A5A7SWA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G001050 PE=4 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 5.8e-104 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of IVF0024796 vs. ExPASy TrEMBL
Match: A0A1S3C7J3 (uncharacterized protein LOC103497904 OS=Cucumis melo OX=3656 GN=LOC103497904 PE=4 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 5.8e-104 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of IVF0024796 vs. ExPASy TrEMBL
Match: A0A0A0KCP9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G062315 PE=4 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 1.2e-101 Identity = 197/200 (98.50%), Postives = 197/200 (98.50%), Query Frame = 0
BLAST of IVF0024796 vs. ExPASy TrEMBL
Match: A0A6J1CCP9 (uncharacterized protein LOC111009532 OS=Momordica charantia OX=3673 GN=LOC111009532 PE=4 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 4.2e-86 Identity = 176/200 (88.00%), Postives = 183/200 (91.50%), Query Frame = 0
BLAST of IVF0024796 vs. ExPASy TrEMBL
Match: A0A6J1EX01 (uncharacterized protein LOC111436920 OS=Cucurbita moschata OX=3662 GN=LOC111436920 PE=4 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 5.3e-81 Identity = 168/200 (84.00%), Postives = 173/200 (86.50%), Query Frame = 0
BLAST of IVF0024796 vs. NCBI nr
Match: XP_008458522.1 (PREDICTED: uncharacterized protein LOC103497904 [Cucumis melo] >KAA0033445.1 uncharacterized protein E6C27_scaffold111G001050 [Cucumis melo var. makuwa]) HSP 1 Score: 385 bits (988), Expect = 1.62e-134 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of IVF0024796 vs. NCBI nr
Match: XP_004144965.1 (uncharacterized protein LOC101217755 [Cucumis sativus] >KGN46172.1 hypothetical protein Csa_005412 [Cucumis sativus]) HSP 1 Score: 377 bits (968), Expect = 1.82e-131 Identity = 197/200 (98.50%), Postives = 197/200 (98.50%), Query Frame = 0
BLAST of IVF0024796 vs. NCBI nr
Match: KAG6575030.1 (hypothetical protein SDJN03_25669, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013605.1 hypothetical protein SDJN02_23772, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 347 bits (890), Expect = 1.23e-119 Identity = 183/200 (91.50%), Postives = 189/200 (94.50%), Query Frame = 0
BLAST of IVF0024796 vs. NCBI nr
Match: XP_022138318.1 (uncharacterized protein LOC111009532 [Momordica charantia]) HSP 1 Score: 325 bits (833), Expect = 5.96e-111 Identity = 176/200 (88.00%), Postives = 183/200 (91.50%), Query Frame = 0
BLAST of IVF0024796 vs. NCBI nr
Match: XP_022930480.1 (uncharacterized protein LOC111436920 [Cucurbita moschata]) HSP 1 Score: 308 bits (790), Expect = 2.12e-104 Identity = 168/200 (84.00%), Postives = 173/200 (86.50%), Query Frame = 0
BLAST of IVF0024796 vs. TAIR 10
Match: AT3G21570.1 (unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 78.6 bits (192), Expect = 6.5e-15 Identity = 71/203 (34.98%), Postives = 96/203 (47.29%), Query Frame = 0
BLAST of IVF0024796 vs. TAIR 10
Match: AT4G32020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25250.1); Has 65 Blast hits to 65 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09 Identity = 65/205 (31.71%), Postives = 97/205 (47.32%), Query Frame = 0
BLAST of IVF0024796 vs. TAIR 10
Match: AT2G25250.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32020.1); Has 30 Blast hits to 30 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 46.2 bits (108), Expect = 3.6e-05 Identity = 44/147 (29.93%), Postives = 65/147 (44.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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