IVF0024775 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCCTCTAGCCTCCACTACCTTCATCATTCAAAATCTCAATCCCAAACCCCATTTTCCCCTCTCTCTCTATTTCTCTAGTTTCTTAACCAAAAGTGAAAAAGAAGGGAAAAAAATACCACAAAACCAAATGGGAGTTTCCCAAGAAACCCTTTTGCAAATTCAACTCAACATGGAAGATCATAAAACAACACAAGATCGCATCATCATCATCAAAGAGATCAGGAACGACAGCTCAAATGATCAATCCATATGGAAGAAAAAATCAATGAAAGAAGAAGTAGGAGAAGAGGAAGATCAAGAAATTAATAGCAAAGGCAAAGACAAAAGTACTTGCAATAATATTAACACAAGAAGAACGACAAGAAGAAGATCAAGAAGCAATTCATTGATATTGAAGAAGAGATCGAGAAGATCATCATCATCATCATCATCAACAAGTAGAATAGAGCAAAGGGTCAACATTTTGAGAAATCTTGTACCAAACAACGACAACCACCAGGACGATGACGAAAGCTGTACTGCCGGATCATTAGAACAGCTTTTCACTCAAACAGCTGATTACATATTGTCATTACAAACAAGAGTCAGATTGATGAAGACTTTGGTTGATGTCTTGTCTGATCCTTCTTCTTCTATTGATGAGTGAGAGAATTTGAAAAAAAAAAGAAAGTTTCATTTTATTTTTTATTTTTATATATATATTTGTGTTTAATTTGTGTAAAACTTATATCATTATCTCTCTTCTGTAAAGATTGATATATGTGATTTTATATATATCATTCTTTTGCTTTTCTTTTTTTTTTTGTTGGTTCTTTTTCTCTTACTTTTGCTTTATTGATCATTTGTCTTTGAAATGTCTCTGTAGTTTTAGAGAGAGAATTTTAACTCTTTTTTCTTTGGGTGTGTGGAAAAGATTTGACTTTTGATTATAAGAAGTTATTTAGGGACATTGGGG CCCCTCTAGCCTCCACTACCTTCATCATTCAAAATCTCAATCCCAAACCCCATTTTCCCCTCTCTCTCTATTTCTCTAGTTTCTTAACCAAAAGTGAAAAAGAAGGGAAAAAAATACCACAAAACCAAATGGGAGTTTCCCAAGAAACCCTTTTGCAAATTCAACTCAACATGGAAGATCATAAAACAACACAAGATCGCATCATCATCATCAAAGAGATCAGGAACGACAGCTCAAATGATCAATCCATATGGAAGAAAAAATCAATGAAAGAAGAAGTAGGAGAAGAGGAAGATCAAGAAATTAATAGCAAAGGCAAAGACAAAAGTACTTGCAATAATATTAACACAAGAAGAACGACAAGAAGAAGATCAAGAAGCAATTCATTGATATTGAAGAAGAGATCGAGAAGATCATCATCATCATCATCATCAACAAGTAGAATAGAGCAAAGGGTCAACATTTTGAGAAATCTTGTACCAAACAACGACAACCACCAGGACGATGACGAAAGCTGTACTGCCGGATCATTAGAACAGCTTTTCACTCAAACAGCTGATTACATATTGTCATTACAAACAAGAGTCAGATTGATGAAGACTTTGGTTGATGTCTTGTCTGATCCTTCTTCTTCTATTGATGAGTGAGAGAATTTGAAAAAAAAAAGAAAGTTTCATTTTATTTTTTATTTTTATATATATATTTGTGTTTAATTTGTGTAAAACTTATATCATTATCTCTCTTCTGTAAAGATTGATATATGTGATTTTATATATATCATTCTTTTGCTTTTCTTTTTTTTTTTGTTGGTTCTTTTTCTCTTACTTTTGCTTTATTGATCATTTGTCTTTGAAATGTCTCTGTAGTTTTAGAGAGAGAATTTTAACTCTTTTTTCTTTGGGTGTGTGGAAAAGATTTGACTTTTGATTATAAGAAGTTATTTAGGGACATTGGGG ATGGGAGTTTCCCAAGAAACCCTTTTGCAAATTCAACTCAACATGGAAGATCATAAAACAACACAAGATCGCATCATCATCATCAAAGAGATCAGGAACGACAGCTCAAATGATCAATCCATATGGAAGAAAAAATCAATGAAAGAAGAAGTAGGAGAAGAGGAAGATCAAGAAATTAATAGCAAAGGCAAAGACAAAAGTACTTGCAATAATATTAACACAAGAAGAACGACAAGAAGAAGATCAAGAAGCAATTCATTGATATTGAAGAAGAGATCGAGAAGATCATCATCATCATCATCATCAACAAGTAGAATAGAGCAAAGGGTCAACATTTTGAGAAATCTTGTACCAAACAACGACAACCACCAGGACGATGACGAAAGCTGTACTGCCGGATCATTAGAACAGCTTTTCACTCAAACAGCTGATTACATATTGTCATTACAAACAAGAGTCAGATTGATGAAGACTTTGGTTGATGTCTTGTCTGATCCTTCTTCTTCTATTGATGAGTGA MGVSQETLLQIQLNMEDHKTTQDRIIIIKEIRNDSSNDQSIWKKKSMKEEVGEEEDQEINSKGKDKSTCNNINTRRTTRRRSRSNSLILKKRSRRSSSSSSSTSRIEQRVNILRNLVPNNDNHQDDDESCTAGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE Homology
BLAST of IVF0024775 vs. ExPASy Swiss-Prot
Match: O22901 (Transcription factor UPBEAT1 OS=Arabidopsis thaliana OX=3702 GN=UPB1 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 5.6e-04 Identity = 36/90 (40.00%), Postives = 54/90 (60.00%), Query Frame = 0
BLAST of IVF0024775 vs. ExPASy TrEMBL
Match: A0A5A7TXU1 (Transcription factor UPBEAT1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001830 PE=4 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 1.0e-80 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of IVF0024775 vs. ExPASy TrEMBL
Match: A0A0A0K6D9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G407810 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 2.6e-60 Identity = 152/175 (86.86%), Postives = 156/175 (89.14%), Query Frame = 0
BLAST of IVF0024775 vs. ExPASy TrEMBL
Match: A0A314ZKL5 (Transcription factor UPBEAT1 OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_38350 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 4.5e-04 Identity = 48/118 (40.68%), Postives = 69/118 (58.47%), Query Frame = 0
BLAST of IVF0024775 vs. ExPASy TrEMBL
Match: A0A314YEL7 (Transcription factor UPBEAT1 OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_40501 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.0e-03 Identity = 45/116 (38.79%), Postives = 68/116 (58.62%), Query Frame = 0
BLAST of IVF0024775 vs. NCBI nr
Match: KAA0046707.1 (transcription factor UPBEAT1 [Cucumis melo var. makuwa] >TYK18243.1 transcription factor UPBEAT1 [Cucumis melo var. makuwa]) HSP 1 Score: 313 bits (801), Expect = 6.30e-107 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of IVF0024775 vs. NCBI nr
Match: XP_031744332.1 (transcription factor UPBEAT1 [Cucumis sativus] >KGN45028.1 hypothetical protein Csa_016025 [Cucumis sativus]) HSP 1 Score: 244 bits (624), Expect = 4.96e-80 Identity = 152/175 (86.86%), Postives = 156/175 (89.14%), Query Frame = 0
BLAST of IVF0024775 vs. NCBI nr
Match: KAG6593250.1 (Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 102 bits (255), Expect = 1.59e-24 Identity = 80/168 (47.62%), Postives = 102/168 (60.71%), Query Frame = 0
BLAST of IVF0024775 vs. NCBI nr
Match: KAG7025601.1 (Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 100 bits (248), Expect = 1.56e-23 Identity = 80/168 (47.62%), Postives = 99/168 (58.93%), Query Frame = 0
BLAST of IVF0024775 vs. NCBI nr
Match: KAG6575752.1 (Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 96.7 bits (239), Expect = 3.61e-22 Identity = 82/170 (48.24%), Postives = 95/170 (55.88%), Query Frame = 0
BLAST of IVF0024775 vs. TAIR 10
Match: AT2G47270.1 (sequence-specific DNA binding transcription factors;transcription regulators ) HSP 1 Score: 45.8 bits (107), Expect = 4.0e-05 Identity = 36/90 (40.00%), Postives = 54/90 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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