IVF0024447 (gene) Melon (IVF77) v1

Overview


Name	IVF0024447
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	chr04: 13904297 .. 13905589 (+)
RNA-Seq Expression	IVF0024447
Synteny	IVF0024447

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCTGTGAATATTTTCTTGGTGTCACCTTGAGGACCACTATAGATTAGTTATTATTCACAAGATTAATATTCTAATCAGTTAGAAGAAATCTCTAATGGTTCCTTGATTGGTTGAGTGAGATAATGAAGATTGTGGAGTTTTAGATATCTTCTCATCAACCAATTAGAAGAGGATGAAGTTCCACAAAGGATAGACTTTGTGGGACTCACCAGACACTATATAAGTAGATTCCATACTTTCATGGATTTTCATCAATAACTCAGCACTTACGAGGACTTACTTCCTTTGAGTTGAAGTTGGTAGGCAATGGCAGCCATGGCTCTTTCATCTACATTCACAGGAAAAGTTGTTCCTTTGAATGCACCTACCGAGCTCTCATCCTCGGTTCGAAGCAACGGTAGAATCTCAATGAGGAAATCCGGAAAGCCAGCAGCTTCCTCAGGCAGCCCATGGTATGGTCCCGACCGTGTCAAGTACCTTGGACCGTTCTCTGGTGAGCCTCCATCTTACCTCAAAGGTGAATTCCCTGGTGACTATGGTTGGGACACTGCAGGTCTATCAGCTGACCCAGAGACATTTGCCAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGGGCTCTAGGATGTGTATTCCCTGAGCTTCTTTCAAGAAATGGAGTCAACTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAAATCTTTAGTGAGGGTGGCCTAGACTATCTTGGAAACCCAAGTCTTATTCATGCACAGAGCATTTTGGCAATTTGGGCATCTCAAGTAGTGTTAATGGGTGCTGTTGAAGGTTACCGTATTGCCGGAGGACCACTTGGAGAGATTACCGATCCCATCTACCCAGGTGGTAGCTTTGATCCCCTTGGGTTGGCTGATGATCCAGAGGCATTTGCAGAACTTAAGGTGAAAGAACTTAAGAATGGTCGTCTTGCAATGTTTTCCATGTTTGGGTTTTTCGTACAGGCCATTGTAACAGGAAAAGGTCCTTTGGAGAACCTTGCAGACCATCTTGCTGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTACCTGGAAAGTGAAATTACTATGTAATGTTCAAACAAGCTTTCAATTTCACTACGGTGTTAGCTTGTAAAATGTAAAATGTACAATCAAAATGTTGAAAATCAACAATCAATGTTATAATCACTGAAACTATCTCGAGCAAGTTAGTGTTTGATTGATCCATTAAAAGAACAGAAAATATATATATAAACCATTGACAGAC

mRNA sequence

GCCTGTGAATATTTTCTTGGTGTCACCTTGAGGACCACTATAGATTAGTTATTATTCACAAGATTAATATTCTAATCAGTTAGAAGAAATCTCTAATGGTTCCTTGATTGGTTGAGTGAGATAATGAAGATTGTGGAGTTTTAGATATCTTCTCATCAACCAATTAGAAGAGGATGAAGTTCCACAAAGGATAGACTTTGTGGGACTCACCAGACACTATATAAGTAGATTCCATACTTTCATGGATTTTCATCAATAACTCAGCACTTACGAGGACTTACTTCCTTTGAGTTGAAGTTGGTAGGCAATGGCAGCCATGGCTCTTTCATCTACATTCACAGGAAAAGTTGTTCCTTTGAATGCACCTACCGAGCTCTCATCCTCGGTTCGAAGCAACGGTAGAATCTCAATGAGGAAATCCGGAAAGCCAGCAGCTTCCTCAGGCAGCCCATGGTATGGTCCCGACCGTGTCAAGTACCTTGGACCGTTCTCTGGTGAGCCTCCATCTTACCTCAAAGGTGAATTCCCTGGTGACTATGGTTGGGACACTGCAGGTCTATCAGCTGACCCAGAGACATTTGCCAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGGGCTCTAGGATGTGTATTCCCTGAGCTTCTTTCAAGAAATGGAGTCAACTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAAATCTTTAGTGAGGGTGGCCTAGACTATCTTGGAAACCCAAGTCTTATTCATGCACAGAGCATTTTGGCAATTTGGGCATCTCAAGTAGTGTTAATGGGTGCTGTTGAAGGTTACCGTATTGCCGGAGGACCACTTGGAGAGATTACCGATCCCATCTACCCAGGTGGTAGCTTTGATCCCCTTGGGTTGGCTGATGATCCAGAGGCATTTGCAGAACTTAAGGTGAAAGAACTTAAGAATGGTCGTCTTGCAATGTTTTCCATGTTTGGGTTTTTCGTACAGGCCATTGTAACAGGAAAAGGTCCTTTGGAGAACCTTGCAGACCATCTTGCTGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTACCTGGAAAGTGAAATTACTATGTAATGTTCAAACAAGCTTTCAATTTCACTACGGTGTTAGCTTGTAAAATGTAAAATGTACAATCAAAATGTTGAAAATCAACAATCAATGTTATAATCACTGAAACTATCTCGAGCAAGTTAGTGTTTGATTGATCCATTAAAAGAACAGAAAATATATATATAAACCATTGACAGAC

Coding sequence (CDS)

ATGGCAGCCATGGCTCTTTCATCTACATTCACAGGAAAAGTTGTTCCTTTGAATGCACCTACCGAGCTCTCATCCTCGGTTCGAAGCAACGGTAGAATCTCAATGAGGAAATCCGGAAAGCCAGCAGCTTCCTCAGGCAGCCCATGGTATGGTCCCGACCGTGTCAAGTACCTTGGACCGTTCTCTGGTGAGCCTCCATCTTACCTCAAAGGTGAATTCCCTGGTGACTATGGTTGGGACACTGCAGGTCTATCAGCTGACCCAGAGACATTTGCCAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGGGCTCTAGGATGTGTATTCCCTGAGCTTCTTTCAAGAAATGGAGTCAACTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAAATCTTTAGTGAGGGTGGCCTAGACTATCTTGGAAACCCAAGTCTTATTCATGCACAGAGCATTTTGGCAATTTGGGCATCTCAAGTAGTGTTAATGGGTGCTGTTGAAGGTTACCGTATTGCCGGAGGACCACTTGGAGAGATTACCGATCCCATCTACCCAGGTGGTAGCTTTGATCCCCTTGGGTTGGCTGATGATCCAGAGGCATTTGCAGAACTTAAGGTGAAAGAACTTAAGAATGGTCGTCTTGCAATGTTTTCCATGTTTGGGTTTTTCGTACAGGCCATTGTAACAGGAAAAGGTCCTTTGGAGAACCTTGCAGACCATCTTGCTGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTACCTGGAAAGTGA

Protein sequence

MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

Homology

[Close]

BLAST of IVF0024447 vs. ExPASy Swiss-Prot
Match: P08221 (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 3.7e-132
Identity = 228/259 (88.03%), Postives = 237/259 (91.51%), Query Frame = 0


Query: 9   TFTGKVVPL--NAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGPFSGEPP 68
           T  G+ V L  NAP      ++ N + +MRK+   + SSGSPWYGPDRVKYLGPFSGEPP
Sbjct: 2   TLAGQAVKLSPNAP-----EIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPP 61

Query: 69  SYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVNFG 128
           SYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGV FG
Sbjct: 62  SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG 121

Query: 129 EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEITD 188
           EAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGPLGE+TD
Sbjct: 122 EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTD 181

Query: 189 PIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 248
           PIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL
Sbjct: 182 PIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHL 241

Query: 249 ADPVNNNAWAYATNFVPGK 266
           ADPVNNNAWAYATNFVPGK
Sbjct: 242 ADPVNNNAWAYATNFVPGK 255

[Close]

BLAST of IVF0024447 vs. ExPASy Swiss-Prot
Match: P09756 (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 PE=3 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 1.1e-131
Identity = 232/265 (87.55%), Postives = 241/265 (90.94%), Query Frame = 0


Query: 2   AAMALSS-TFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 61
           ++MALSS +  GK V      +L  S    GR+SMRK+     SSGSPWYGPDRVKYLGP
Sbjct: 5   SSMALSSPSLAGKAV------KLGPSAPEVGRVSMRKTVTKQVSSGSPWYGPDRVKYLGP 64

Query: 62  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 121
           FSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 65  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 124

Query: 122 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 181
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA+QV+LMGAVEGYRIAGGP
Sbjct: 125 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGP 184

Query: 182 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 241
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 185 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 244

Query: 242 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLA PVNNNAWAYATNFVPGK
Sbjct: 245 NLADHLAGPVNNNAWAYATNFVPGK 263

[Close]

BLAST of IVF0024447 vs. ExPASy Swiss-Prot
Match: P07369 (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB3C PE=3 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 1.9e-131
Identity = 231/267 (86.52%), Postives = 243/267 (91.01%), Query Frame = 0


Query: 2   AAMAL-SSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPA--ASSGSPWYGPDRVKYL 61
           + MAL SSTF GK V L+     SS +  NGR++MRK+   A  ASSGSPWYGPDRVKYL
Sbjct: 4   STMALSSSTFAGKAVKLSPS---SSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 63

Query: 62  GPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 121
           GPFSGE PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 64  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 123

Query: 122 SRNGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 181
           +RNGV FGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAG
Sbjct: 124 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 183

Query: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241
           GPLGE+ DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 242 LENLADHLADPVNNNAWAYATNFVPGK 266
           LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 LENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of IVF0024447 vs. ExPASy Swiss-Prot
Match: P27492 (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB16 PE=2 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 1.2e-130
Identity = 226/263 (85.93%), Postives = 239/263 (90.87%), Query Frame = 0


Query: 5   ALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPA--ASSGSPWYGPDRVKYLGPFS 64
           ALSS F GK V L+     SS V  NG+++MRK+   A   SSGSPWYGPDRVKYLGPFS
Sbjct: 7   ALSSPFAGKAVKLSPS---SSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFS 66

Query: 65  GEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNG 124
           GE PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNG
Sbjct: 67  GESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 126

Query: 125 VNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLG 184
           V FGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYR+AGGPLG
Sbjct: 127 VKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLG 186

Query: 185 EITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENL 244
           E+ DP+YPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENL
Sbjct: 187 EVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL 246

Query: 245 ADHLADPVNNNAWAYATNFVPGK 266
           ADHLADPVNNNAW+YATNFVPGK
Sbjct: 247 ADHLADPVNNNAWSYATNFVPGK 266

[Close]

BLAST of IVF0024447 vs. ExPASy Swiss-Prot
Match: P27497 (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays OX=4577 GN=CAB-M9 PE=2 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 2.1e-130
Identity = 230/268 (85.82%), Postives = 243/268 (90.67%), Query Frame = 0


Query: 2   AAMALSST-FTGKVVPLNAPTELSSSVRSNGRISMRKS---GKPAASSGSPWYGPDRVKY 61
           + MALSST F GK V  N P    SS+    R++MRK+    KPAASSGSPWYGPDRV Y
Sbjct: 4   STMALSSTAFAGKAV--NVP----SSLFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLY 63

Query: 62  LGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 121
           LGP SGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL
Sbjct: 64  LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 123

Query: 122 LSRNGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIA 181
           L+RNGV FGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGA+EGYR+A
Sbjct: 124 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVA 183

Query: 182 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 241
           GGPLGE+ DP+YPGG+FDPLGLADDPEAFA++KVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 184 GGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKG 243

Query: 242 PLENLADHLADPVNNNAWAYATNFVPGK 266
           PLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 244 PLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of IVF0024447 vs. ExPASy TrEMBL
Match: A0A5D3DAB9 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00790 PE=3 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 6.4e-151
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60
           MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of IVF0024447 vs. ExPASy TrEMBL
Match: A0A1S3BHH5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489893 PE=3 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 6.4e-151
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60
           MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of IVF0024447 vs. ExPASy TrEMBL
Match: A0A0A0LCY3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_3G664560 PE=3 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 3.9e-148
Identity = 260/265 (98.11%), Postives = 263/265 (99.25%), Query Frame = 0


Query: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60
           MAAMALSSTFTGKVVPLNA TELSSSVRSNGR++MRKSGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAFTELSSSVRSNGRVTMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of IVF0024447 vs. ExPASy TrEMBL
Match: A0A6J1KEF6 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493100 PE=3 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 4.3e-147
Identity = 256/265 (96.60%), Postives = 260/265 (98.11%), Query Frame = 0


Query: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60
           MAAMALSSTFTGK VPLNAPTEL SSVRSNGR+SMRKSGKPA+SSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA Q+VLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQIVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of IVF0024447 vs. ExPASy TrEMBL
Match: A0A6J1J722 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481846 PE=3 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 7.3e-147
Identity = 255/265 (96.23%), Postives = 260/265 (98.11%), Query Frame = 0


Query: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60
           MA MALSSTFTGK +PLNAPTELSSSVRSN R+SMR+SGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MATMALSSTFTGKAIPLNAPTELSSSVRSNSRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
            SGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  LSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG+FVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of IVF0024447 vs. NCBI nr
Match: XP_008447450.1 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >KAA0038103.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa] >TYK20505.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 538 bits (1385), Expect = 7.14e-193
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60
           MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of IVF0024447 vs. NCBI nr
Match: XP_038903667.1 (chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida])

HSP 1 Score: 530 bits (1364), Expect = 1.14e-189
Identity = 259/265 (97.74%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60
           MAAMALSSTFTGK VPLNAPTELSSSVRSNGR+SMR+SGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELSSSVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of IVF0024447 vs. NCBI nr
Match: XP_004148579.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus] >KGN58532.1 hypothetical protein Csa_001702 [Cucumis sativus])

HSP 1 Score: 528 bits (1361), Expect = 3.26e-189
Identity = 260/265 (98.11%), Postives = 263/265 (99.25%), Query Frame = 0


Query: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60
           MAAMALSSTFTGKVVPLNA TELSSSVRSNGR++MRKSGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAFTELSSSVRSNGRVTMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of IVF0024447 vs. NCBI nr
Match: XP_022998479.1 (chlorophyll a-b binding protein of LHCII type 1 [Cucurbita maxima])

HSP 1 Score: 525 bits (1352), Expect = 7.67e-188
Identity = 256/265 (96.60%), Postives = 260/265 (98.11%), Query Frame = 0


Query: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60
           MAAMALSSTFTGK VPLNAPTEL SSVRSNGR+SMRKSGKPA+SSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELFSSVRSNGRVSMRKSGKPASSSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA Q+VLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQIVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of IVF0024447 vs. NCBI nr
Match: XP_022983188.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima])

HSP 1 Score: 524 bits (1350), Expect = 1.55e-187
Identity = 255/265 (96.23%), Postives = 260/265 (98.11%), Query Frame = 0


Query: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60
           MA MALSSTFTGK +PLNAPTELSSSVRSN R+SMR+SGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MATMALSSTFTGKAIPLNAPTELSSSVRSNSRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
            SGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  LSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG+FVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of IVF0024447 vs. TAIR 10
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1 )

HSP 1 Score: 457.2 bits (1175), Expect = 8.9e-129
Identity = 225/266 (84.59%), Postives = 239/266 (89.85%), Query Frame = 0


Query: 2   AAMALSS-TFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 61
           + MALSS   TGK V L   +  +S V   GRI+MRK+ KP   SGSPWYG DRVKYLGP
Sbjct: 4   STMALSSPALTGKAVKL---SPAASEVFGTGRITMRKASKPTGPSGSPWYGSDRVKYLGP 63

Query: 62  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 121
           FSGEPPSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+R
Sbjct: 64  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 123

Query: 122 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-G 181
           NGV FGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG G
Sbjct: 124 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 183

Query: 182 PLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 241
           PLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 184 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 243

Query: 242 ENLADHLADPVNNNAWAYATNFVPGK 266
           ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 ENLADHLADPVNNNAWAFATNFVPGK 266

[Close]

BLAST of IVF0024447 vs. TAIR 10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2 )

HSP 1 Score: 450.3 bits (1157), Expect = 1.1e-126
Identity = 223/267 (83.52%), Postives = 238/267 (89.14%), Query Frame = 0


Query: 2   AAMALSS-TFTGKVVPLNAPTELSSSVRSNGRISMRKS-GKPAASSGSPWYGPDRVKYLG 61
           + MALSS  F GK V        +S V  +GR++MRK+  KP   SGSPWYG DRVKYLG
Sbjct: 4   STMALSSPAFAGKAV-----KPAASDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 63

Query: 62  PFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 121
           PFSGEPPSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 64  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 123

Query: 122 RNGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 181
           RNGV FGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 124 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 183

Query: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 242 LENLADHLADPVNNNAWAYATNFVPGK 266
           LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 LENLADHLADPVNNNAWAFATNFVPGK 265

[Close]

BLAST of IVF0024447 vs. TAIR 10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1 )

HSP 1 Score: 449.1 bits (1154), Expect = 2.4e-126
Identity = 222/267 (83.15%), Postives = 239/267 (89.51%), Query Frame = 0


Query: 2   AAMALSS-TFTGKVVPLNAPTELSSSVRSNGRISMRKS-GKPAASSGSPWYGPDRVKYLG 61
           + MALSS  F GK V L   +  +S V  +GR++MRK+  KP   SGSPWYG DRVKYLG
Sbjct: 4   STMALSSPAFAGKAVKL---SPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 63

Query: 62  PFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 121
           PFSGE PSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 64  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 123

Query: 122 RNGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 181
           RNGV FGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 124 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 183

Query: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 242 LENLADHLADPVNNNAWAYATNFVPGK 266
           +ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of IVF0024447 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 448.7 bits (1153), Expect = 3.2e-126
Identity = 222/267 (83.15%), Postives = 239/267 (89.51%), Query Frame = 0


Query: 2   AAMALSS-TFTGKVVPLNAPTELSSSVRSNGRISMRKS-GKPAASSGSPWYGPDRVKYLG 61
           + MALSS  F GK V L   +  +S V  +GR++MRK+  KP   SGSPWYG DRVKYLG
Sbjct: 4   STMALSSPAFAGKAVNL---SPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 63

Query: 62  PFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 121
           PFSGE PSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 64  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 123

Query: 122 RNGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 181
           RNGV FGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 124 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 183

Query: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 242 LENLADHLADPVNNNAWAYATNFVPGK 266
           +ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of IVF0024447 vs. TAIR 10
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2 )

HSP 1 Score: 448.7 bits (1153), Expect = 3.2e-126
Identity = 222/267 (83.15%), Postives = 239/267 (89.51%), Query Frame = 0


Query: 2   AAMALSS-TFTGKVVPLNAPTELSSSVRSNGRISMRKS-GKPAASSGSPWYGPDRVKYLG 61
           + MALSS  F GK V L   +  +S V  +GR++MRK+  KP   SGSPWYG DRVKYLG
Sbjct: 4   STMALSSPAFAGKAVNL---SPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 63

Query: 62  PFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 121
           PFSGE PSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 64  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 123

Query: 122 RNGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 181
           RNGV FGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 124 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 183

Query: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 242 LENLADHLADPVNNNAWAYATNFVPGK 266
           +ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 IENLADHLADPVNNNAWAFATNFVPGK 267

The following BLAST results are available for this feature:

BLAST of IVF0024447 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P08221	3.7e-132	88.03	Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cuc...	[more]
P09756	1.1e-131	87.55	Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 ...	[more]
P07369	1.9e-131	86.52	Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=408...	[more]
P27492	1.2e-130	85.93	Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
P27497	2.1e-130	85.82	Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays OX=4577 GN=CAB-M9 ...	[more]

BLAST of IVF0024447 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DAB9	6.4e-151	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BHH5	6.4e-151	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0LCY3	3.9e-148	98.11	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A6J1KEF6	4.3e-147	96.60	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1J722	7.3e-147	96.23	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of IVF0024447 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447450.1	7.14e-193	100.00	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >...	[more]
XP_038903667.1	1.14e-189	97.74	chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida]	[more]
XP_004148579.1	3.26e-189	98.11	chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus] >KGN58532...	[more]
XP_022998479.1	7.67e-188	96.60	chlorophyll a-b binding protein of LHCII type 1 [Cucurbita maxima]	[more]
XP_022983188.1	1.55e-187	96.23	chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima]	[more]

BLAST of IVF0024447 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34430.1	8.9e-129	84.59	light-harvesting chlorophyll-protein complex II subunit B1	[more]
AT2G34420.1	1.1e-126	83.52	photosystem II light harvesting complex gene B1B2	[more]
AT1G29930.1	2.4e-126	83.15	chlorophyll A/B binding protein 1	[more]
AT1G29910.1	3.2e-126	83.15	chlorophyll A/B binding protein 3	[more]
AT1G29920.1	3.2e-126	83.15	chlorophyll A/B-binding protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 65..231 e-value: 3.2E-49 score: 167.6
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 56..258 e-value: 2.9E-90 score: 303.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..47
None	No IPR available	PANTHER	PTHR21649:SF97	CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC	coord: 2..265
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 48..262
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 2..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0024447.1	IVF0024447.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding