IVF0024307 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAATGCTTCCAACGAGTGGGAAGGCTCGTCTGGTGTCAAAAATCACTGGAAACAAACTTGCAACGAAGGAATCGGGCTAAGCTCGATGATATCTGATGTTCGTCCCAAGAAAATGATAGCAAGAGATGCCTGGACTCAGTTATCTCGTCCTGGGGTAAAAAGAGGTCCCACGACGGTTTCTTCCCTTTGCTTCGTATTGGTCAGAAGTCTTTCGATCTTTGGGGCTCGAACTTGA ATGGCTAATGCTTCCAACGAGTGGGAAGGCTCGTCTGGTGTCAAAAATCACTGGAAACAAACTTGCAACGAAGGAATCGGGCTAAGCTCGATGATATCTGATGTTCGTCCCAAGAAAATGATAGCAAGAGATGCCTGGACTCAGTTATCTCGTCCTGGGGTAAAAAGAGGTCCCACGACGGTTTCTTCCCTTTGCTTCGTATTGGTCAGAAGTCTTTCGATCTTTGGGGCTCGAACTTGA ATGGCTAATGCTTCCAACGAGTGGGAAGGCTCGTCTGGTGTCAAAAATCACTGGAAACAAACTTGCAACGAAGGAATCGGGCTAAGCTCGATGATATCTGATGTTCGTCCCAAGAAAATGATAGCAAGAGATGCCTGGACTCAGTTATCTCGTCCTGGGGTAAAAAGAGGTCCCACGACGGTTTCTTCCCTTTGCTTCGTATTGGTCAGAAGTCTTTCGATCTTTGGGGCTCGAACTTGA MANASNEWEGSSGVKNHWKQTCNEGIGLSSMISDVRPKKMIARDAWTQLSRPGVKRGPTTVSSLCFVLVRSLSIFGART Homology
BLAST of IVF0024307 vs. ExPASy TrEMBL
Match: A0A5D3DFP2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00220 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 2.2e-14 Identity = 48/71 (67.61%), Postives = 50/71 (70.42%), Query Frame = 0
BLAST of IVF0024307 vs. ExPASy TrEMBL
Match: A0A5D3DIK9 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold605G00040 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.1e-13 Identity = 46/71 (64.79%), Postives = 50/71 (70.42%), Query Frame = 0
BLAST of IVF0024307 vs. ExPASy TrEMBL
Match: A0A5D3CQ36 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00910 PE=3 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 5.4e-13 Identity = 44/66 (66.67%), Postives = 46/66 (69.70%), Query Frame = 0
BLAST of IVF0024307 vs. ExPASy TrEMBL
Match: A0A5A7V5J2 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00210 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.0e-12 Identity = 44/71 (61.97%), Postives = 49/71 (69.01%), Query Frame = 0
BLAST of IVF0024307 vs. ExPASy TrEMBL
Match: A0A5A7UVV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43054G00020 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.5e-10 Identity = 38/65 (58.46%), Postives = 43/65 (66.15%), Query Frame = 0
BLAST of IVF0024307 vs. NCBI nr
Match: TYK22521.1 (uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]) HSP 1 Score: 87.8 bits (216), Expect = 5.34e-18 Identity = 48/71 (67.61%), Postives = 50/71 (70.42%), Query Frame = 0
BLAST of IVF0024307 vs. NCBI nr
Match: TYK23423.1 (DUF4283 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 85.9 bits (211), Expect = 2.16e-17 Identity = 45/68 (66.18%), Postives = 49/68 (72.06%), Query Frame = 0
BLAST of IVF0024307 vs. NCBI nr
Match: KAA0037172.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK13901.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 83.6 bits (205), Expect = 2.38e-17 Identity = 44/66 (66.67%), Postives = 46/66 (69.70%), Query Frame = 0
BLAST of IVF0024307 vs. NCBI nr
Match: KAA0062888.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK22520.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 81.3 bits (199), Expect = 1.10e-15 Identity = 44/71 (61.97%), Postives = 49/71 (69.01%), Query Frame = 0
BLAST of IVF0024307 vs. NCBI nr
Match: KAA0057641.1 (hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa]) HSP 1 Score: 74.3 bits (181), Expect = 2.94e-13 Identity = 38/65 (58.46%), Postives = 43/65 (66.15%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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