IVF0024086 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTGCCATCATGAGTCCTACTCTCATCATTGCTATGGAAAAAAACCCCTTTTTTCTCTCTCTTCTTTCTCAATTTCCCCTTCTATTTATACTCTCAATCCCCCATTCTCCCCCATTGCTAACAATTTCTCCACTTTCATACCTCCTCAATCATGTGCCATTCTTCCCGATTCATCCTCACTCCTTCCTATTTAGCCTGCCGCCACCATCGACGGCGGCGCCCCGTTCGAGTTTACAGCCTCTTGAGGTGATTGATTTTATTTTATTTCATTTTCATTTTTCTTCTGATTCTCTGGTATTTACAGAGTTCTTTTTTTCTTTTTTTTTTTATTATTATTATTAATCGTTTTCAGAAGGATGAGATTCACAACGGAAGAAGCGAATTCGGCCGGCGTTAAGGTAGAAATGGAGATCAAGAATTTGAAACTGTATATGGAGAATCAAAGCATTATTGAAGAGAACGAGAGATTGAGAAAGAAAGCGTTTCTTCTTCACAAAGAGAATCAGGTTTTGTTATCTCAGCTTCAGAATTTCTCCGACTATAAACCACCGCAGTCTAGCTCCGATTTGAGTGCCTGCAGTTGGGAAAGTAAACAAAATCATCTGTAGCGAATGAATCAAGTAGATGATTCTTCAATCTTTGATAAAATTTTCTTGCTAGTGATTTCTTTTTTTTTTATTTTCCTACGATTCCTTGGTTTGTAATCTGTTGTTTTGACAATAAATTAGGTTTTTTATTTTGAGGGGAAGGGAATAAAGGGTAGAATTTGGTTATTAGGGGATAGATTTTGAGAATATAGTTTATGTGATGAAATATTATGGAGCAAAACTCTGTTAGTAGTTTGTACCGTTAAATTCGATGTTATCTAAATTCTCCATTGATGAAACAAATTTCATCCATTGAAGAAGCTTTGGTTGGTTTGATCTTGAAGCTGGAGAATGATTTGGTATTTTATCCTACAACTTGAATCAAAT CTTGCCATCATGAGTCCTACTCTCATCATTGCTATGGAAAAAAACCCCTTTTTTCTCTCTCTTCTTTCTCAATTTCCCCTTCTATTTATACTCTCAATCCCCCATTCTCCCCCATTGCTAACAATTTCTCCACTTTCATACCTCCTCAATCATGTGCCATTCTTCCCGATTCATCCTCACTCCTTCCTATTTAGCCTGCCGCCACCATCGACGGCGGCGCCCCGTTCGAGTTTACAGCCTCTTGAGAAGGATGAGATTCACAACGGAAGAAGCGAATTCGGCCGGCGTTAAGGTAGAAATGGAGATCAAGAATTTGAAACTGTATATGGAGAATCAAAGCATTATTGAAGAGAACGAGAGATTGAGAAAGAAAGCGTTTCTTCTTCACAAAGAGAATCAGGTTTTGTTATCTCAGCTTCAGAATTTCTCCGACTATAAACCACCGCAGTCTAGCTCCGATTTGAGTGCCTGCAGTTGGGAAAGTAAACAAAATCATCTGTAGCGAATGAATCAAGTAGATGATTCTTCAATCTTTGATAAAATTTTCTTGCTAGTGATTTCTTTTTTTTTTATTTTCCTACGATTCCTTGGTTTGTAATCTGTTGTTTTGACAATAAATTAGGTTTTTTATTTTGAGGGGAAGGGAATAAAGGGTAGAATTTGGTTATTAGGGGATAGATTTTGAGAATATAGTTTATGTGATGAAATATTATGGAGCAAAACTCTGTTAGTAGTTTGTACCGTTAAATTCGATGTTATCTAAATTCTCCATTGATGAAACAAATTTCATCCATTGAAGAAGCTTTGGTTGGTTTGATCTTGAAGCTGGAGAATGATTTGGTATTTTATCCTACAACTTGAATCAAAT ATGTGCCATTCTTCCCGATTCATCCTCACTCCTTCCTATTTAGCCTGCCGCCACCATCGACGGCGGCGCCCCGTTCGAGTTTACAGCCTCTTGAGAAGGATGAGATTCACAACGGAAGAAGCGAATTCGGCCGGCGTTAAGGTAGAAATGGAGATCAAGAATTTGAAACTGTATATGGAGAATCAAAGCATTATTGAAGAGAACGAGAGATTGAGAAAGAAAGCGTTTCTTCTTCACAAAGAGAATCAGGTTTTGTTATCTCAGCTTCAGAATTTCTCCGACTATAAACCACCGCAGTCTAGCTCCGATTTGAGTGCCTGCAGTTGGGAAAGTAAACAAAATCATCTGTAG MCHSSRFILTPSYLACRHHRRRRPVRVYSLLRRMRFTTEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSSSDLSACSWESKQNHL Homology
BLAST of IVF0024086 vs. ExPASy Swiss-Prot
Match: F4IG60 (Protein LITTLE ZIPPER 1 OS=Arabidopsis thaliana OX=3702 GN=ZPR1 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 1.9e-08 Identity = 44/92 (47.83%), Postives = 57/92 (61.96%), Query Frame = 0
BLAST of IVF0024086 vs. ExPASy Swiss-Prot
Match: Q9LZX5 (Protein LITTLE ZIPPER 2 OS=Arabidopsis thaliana OX=3702 GN=ZPR2 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.3e-07 Identity = 39/97 (40.21%), Postives = 55/97 (56.70%), Query Frame = 0
BLAST of IVF0024086 vs. ExPASy Swiss-Prot
Match: Q56WL5 (Protein LITTLE ZIPPER 4 OS=Arabidopsis thaliana OX=3702 GN=ZPR4 PE=1 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 5.0e-04 Identity = 25/41 (60.98%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of IVF0024086 vs. ExPASy Swiss-Prot
Match: Q9LXI8 (Protein LITTLE ZIPPER 3 OS=Arabidopsis thaliana OX=3702 GN=ZPR3 PE=1 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 8.5e-04 Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 0
BLAST of IVF0024086 vs. ExPASy TrEMBL
Match: A0A0A0L3S0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G125520 PE=4 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 8.1e-50 Identity = 109/116 (93.97%), Postives = 109/116 (93.97%), Query Frame = 0
BLAST of IVF0024086 vs. ExPASy TrEMBL
Match: A0A5D3D1P7 (Protein LITTLE ZIPPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004090 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.8e-36 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of IVF0024086 vs. ExPASy TrEMBL
Match: A0A6J1E9A8 (protein LITTLE ZIPPER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431869 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 3.1e-33 Identity = 87/106 (82.08%), Postives = 91/106 (85.85%), Query Frame = 0
BLAST of IVF0024086 vs. ExPASy TrEMBL
Match: A0A6J1IWC5 (protein LITTLE ZIPPER 1-like OS=Cucurbita maxima OX=3661 GN=LOC111479815 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 9.0e-33 Identity = 86/106 (81.13%), Postives = 90/106 (84.91%), Query Frame = 0
BLAST of IVF0024086 vs. ExPASy TrEMBL
Match: A0A6J1CZF0 (protein LITTLE ZIPPER 2-like OS=Momordica charantia OX=3673 GN=LOC111015992 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 4.3e-27 Identity = 70/100 (70.00%), Postives = 80/100 (80.00%), Query Frame = 0
BLAST of IVF0024086 vs. NCBI nr
Match: KGN56585.1 (hypothetical protein Csa_011002 [Cucumis sativus]) HSP 1 Score: 203 bits (516), Expect = 2.70e-65 Identity = 109/116 (93.97%), Postives = 109/116 (93.97%), Query Frame = 0
BLAST of IVF0024086 vs. NCBI nr
Match: KAA0049024.1 (protein LITTLE ZIPPER 3-like [Cucumis melo var. makuwa] >TYK17540.1 protein LITTLE ZIPPER 3-like [Cucumis melo var. makuwa]) HSP 1 Score: 160 bits (405), Expect = 8.43e-49 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of IVF0024086 vs. NCBI nr
Match: XP_038901104.1 (protein LITTLE ZIPPER 1-like [Benincasa hispida]) HSP 1 Score: 160 bits (406), Expect = 1.31e-48 Identity = 92/116 (79.31%), Postives = 97/116 (83.62%), Query Frame = 0
BLAST of IVF0024086 vs. NCBI nr
Match: XP_022924351.1 (protein LITTLE ZIPPER 1-like [Cucurbita moschata] >KAG6582570.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018954.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 148 bits (373), Expect = 1.32e-43 Identity = 87/106 (82.08%), Postives = 91/106 (85.85%), Query Frame = 0
BLAST of IVF0024086 vs. NCBI nr
Match: XP_022980450.1 (protein LITTLE ZIPPER 1-like [Cucurbita maxima]) HSP 1 Score: 146 bits (369), Expect = 5.35e-43 Identity = 86/106 (81.13%), Postives = 90/106 (84.91%), Query Frame = 0
BLAST of IVF0024086 vs. TAIR 10
Match: AT2G45450.1 (protein binding ) HSP 1 Score: 60.1 bits (144), Expect = 1.4e-09 Identity = 44/92 (47.83%), Postives = 57/92 (61.96%), Query Frame = 0
BLAST of IVF0024086 vs. TAIR 10
Match: AT3G60890.1 (protein binding ) HSP 1 Score: 57.4 bits (137), Expect = 9.0e-09 Identity = 39/97 (40.21%), Postives = 55/97 (56.70%), Query Frame = 0
BLAST of IVF0024086 vs. TAIR 10
Match: AT3G60890.2 (protein binding ) HSP 1 Score: 55.8 bits (133), Expect = 2.6e-08 Identity = 36/92 (39.13%), Postives = 53/92 (57.61%), Query Frame = 0
BLAST of IVF0024086 vs. TAIR 10
Match: AT3G52770.1 (protein binding ) HSP 1 Score: 44.7 bits (104), Expect = 6.0e-05 Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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