IVF0023995 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTGTTTCCAATCAAAGTAAAATTTCTAACCCAATCTGGGGGAATTCCAAACTTTCTGGACTTCCCTTGCCGTCGTTCTCAACTATCGTGAGCTGACCAACAACCTCCACCGCCGCCGCTTCCTCCTCATTCTTTTCAACTATTCCAAATCCCATCTATCTCTCTCCCCAAAATCCACAGAGAAATACATTTGAAAAAAGGAAAAAAAAAAAAAAACAGAGAGAGAGAGAGAGAATGGCTATGGCCACTACCTGCTGTGTTAACAACCTCAATCCGCCGCCGCGTTTGTATCAAAATTCCACCGCATCCACCAACAACCCACTGCTCCCACTGTAAGAAAATCCGTTCATTAATCGTTTCGTTCTTTTTGAAAATTTTGTTTACGAACACCGATCACACAATACAAGTTCCTTTGTTCTGTTTTTACGAGTTTCAAAGTCTTTCCACAGCTTTTAGATAAAAATGATATGGGTATTCATTTATATCCAAAGTTAATCCGAGGCAATTTTGAATTTTGGGTGGATTTGGGGTTAGATGATCCTTGGTTTAATTAATTGGATTCTAGGTTTTATTTAGGCTGCAGTAACGCTTACAATCTCTTGAAGTTTTGGTCTGTCTTCACACCTATGAGAGATTTTAGTTGTCTCACGTGAGGAAATTATATATTTTGGAAGTGTACACACATATATATATATATACCAAAGAGTTGCAAAAGTGGATAGCGTGCTAGTTTAAGTACCTCCCTACTCGTATATGTTGTGTCGTTCGATATTATCTTTTATTTCTTCCTTCAAAATTACTGCTGATTTCCATCCTATTTTAATCAGTACACATTTATGGTGGATCTTCTGTTAACTTTGAACCCAACAACCCTACATGATTCATATTGAGGCTGTATCAACTTTGTTATCAAAGTGGTAGTTAATATCTTCATTCAATTAGACCAAACAGTATACGACAAAGACAAGTGACATATTCAAAATCCATTGTATCAATCTTGTCTTTGATTTGATTTGTAATTAATCTTAGATTCCAAAGAAGTAAAAAAATGAAATGGCCATCATCCAAACAAAAAAATAAATCTTATCCTACAATTCGATCATTTTGAATAATTATGGTAATGCGTTTTGTATTGGACAGGAACGGAAGTGGAGATCAATGGTGGCGAAAACGGTGCGTTTTGGGAGTAGCCGGAGTGATGACGGCGCTGGTAATGAGCGGAGAAAGCGGAGGCGTAGAAATGGGAAATGTTAATAGTTTTGTTGATAATTCAAGAAAATGGAGCGAAGAAAGAATGTGCCCGCAATGGCGCCTCAATTCCCTCGAAACAATCGTGCCGGAGAATCTTCCGAGGCCGGCCGCTCGCCGGAGATGGGACCCCGCCGCCCTTCCTCACACGGCGCCGGCCCCTCAACTGCGAACCACAAATAGAGCCTCCCTTTCTACTCGCTGCTTCTCCATGTAAATAACGAAACAAACCAAATACACAATTTACCATTTCTTCAAATACCATTTTACAAAATATTAAATTTTTAAATATAAATATTACTTCAAACGTTCCCTCATTTTACTCAATTCTTCAATTCTAGTCTATAC ATTGTTTCCAATCAAAGTAAAATTTCTAACCCAATCTGGGGGAATTCCAAACTTTCTGGACTTCCCTTGCCGTCGTTCTCAACTATCGTGAGCTGACCAACAACCTCCACCGCCGCCGCTTCCTCCTCATTCTTTTCAACTATTCCAAATCCCATCTATCTCTCTCCCCAAAATCCACAGAGAAATACATTTGAAAAAAGGAAAAAAAAAAAAAAACAGAGAGAGAGAGAGAGAATGGCTATGGCCACTACCTGCTGTGTTAACAACCTCAATCCGCCGCCGCGTTTGTATCAAAATTCCACCGCATCCACCAACAACCCACTGCTCCCACTGAACGGAAGTGGAGATCAATGGTGGCGAAAACGGTGCGTTTTGGGAGTAGCCGGAGTGATGACGGCGCTGGTAATGAGCGGAGAAAGCGGAGGCGTAGAAATGGGAAATGTTAATAGTTTTGTTGATAATTCAAGAAAATGGAGCGAAGAAAGAATGTGCCCGCAATGGCGCCTCAATTCCCTCGAAACAATCGTGCCGGAGAATCTTCCGAGGCCGGCCGCTCGCCGGAGATGGGACCCCGCCGCCCTTCCTCACACGGCGCCGGCCCCTCAACTGCGAACCACAAATAGAGCCTCCCTTTCTACTCGCTGCTTCTCCATGTAAATAACGAAACAAACCAAATACACAATTTACCATTTCTTCAAATACCATTTTACAAAATATTAAATTTTTAAATATAAATATTACTTCAAACGTTCCCTCATTTTACTCAATTCTTCAATTCTAGTCTATAC ATGGCTATGGCCACTACCTGCTGTGTTAACAACCTCAATCCGCCGCCGCGTTTGTATCAAAATTCCACCGCATCCACCAACAACCCACTGCTCCCACTGAACGGAAGTGGAGATCAATGGTGGCGAAAACGGTGCGTTTTGGGAGTAGCCGGAGTGATGACGGCGCTGGTAATGAGCGGAGAAAGCGGAGGCGTAGAAATGGGAAATGTTAATAGTTTTGTTGATAATTCAAGAAAATGGAGCGAAGAAAGAATGTGCCCGCAATGGCGCCTCAATTCCCTCGAAACAATCGTGCCGGAGAATCTTCCGAGGCCGGCCGCTCGCCGGAGATGGGACCCCGCCGCCCTTCCTCACACGGCGCCGGCCCCTCAACTGCGAACCACAAATAGAGCCTCCCTTTCTACTCGCTGCTTCTCCATGTAA MAMATTCCVNNLNPPPRLYQNSTASTNNPLLPLNGSGDQWWRKRCVLGVAGVMTALVMSGESGGVEMGNVNSFVDNSRKWSEERMCPQWRLNSLETIVPENLPRPAARRRWDPAALPHTAPAPQLRTTNRASLSTRCFSM Homology
BLAST of IVF0023995 vs. ExPASy TrEMBL
Match: A0A5A7VGF0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002860 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 6.1e-76 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of IVF0023995 vs. ExPASy TrEMBL
Match: A0A1S3BBI5 (uncharacterized protein LOC103488267 OS=Cucumis melo OX=3656 GN=LOC103488267 PE=4 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 3.9e-75 Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0
BLAST of IVF0023995 vs. ExPASy TrEMBL
Match: A0A0A0LLU6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379360 PE=4 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 5.5e-61 Identity = 122/140 (87.14%), Postives = 127/140 (90.71%), Query Frame = 0
BLAST of IVF0023995 vs. ExPASy TrEMBL
Match: A0A6J1KBE7 (uncharacterized protein LOC111492380 OS=Cucurbita maxima OX=3661 GN=LOC111492380 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 4.0e-51 Identity = 109/140 (77.86%), Postives = 119/140 (85.00%), Query Frame = 0
BLAST of IVF0023995 vs. ExPASy TrEMBL
Match: A0A6J1EPL8 (uncharacterized protein LOC111436227 OS=Cucurbita moschata OX=3662 GN=LOC111436227 PE=4 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 2.2e-49 Identity = 108/141 (76.60%), Postives = 119/141 (84.40%), Query Frame = 0
BLAST of IVF0023995 vs. NCBI nr
Match: KAA0064965.1 (uncharacterized protein E6C27_scaffold82G002860 [Cucumis melo var. makuwa]) HSP 1 Score: 290 bits (742), Expect = 5.61e-99 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of IVF0023995 vs. NCBI nr
Match: XP_008445145.1 (PREDICTED: uncharacterized protein LOC103488267 [Cucumis melo]) HSP 1 Score: 287 bits (735), Expect = 6.56e-98 Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0
BLAST of IVF0023995 vs. NCBI nr
Match: XP_038884319.1 (uncharacterized protein LOC120075190 [Benincasa hispida]) HSP 1 Score: 224 bits (572), Expect = 4.55e-73 Identity = 110/140 (78.57%), Postives = 124/140 (88.57%), Query Frame = 0
BLAST of IVF0023995 vs. NCBI nr
Match: KAE8652190.1 (hypothetical protein Csa_022219 [Cucumis sativus]) HSP 1 Score: 226 bits (575), Expect = 1.51e-72 Identity = 115/133 (86.47%), Postives = 120/133 (90.23%), Query Frame = 0
BLAST of IVF0023995 vs. NCBI nr
Match: XP_022997474.1 (uncharacterized protein LOC111492380 [Cucurbita maxima]) HSP 1 Score: 207 bits (527), Expect = 2.87e-66 Identity = 109/140 (77.86%), Postives = 119/140 (85.00%), Query Frame = 0
BLAST of IVF0023995 vs. TAIR 10
Match: AT2G25625.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 62.8 bits (151), Expect = 2.6e-10 Identity = 51/133 (38.35%), Postives = 64/133 (48.12%), Query Frame = 0
BLAST of IVF0023995 vs. TAIR 10
Match: AT2G25625.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 62.4 bits (150), Expect = 3.4e-10 Identity = 51/132 (38.64%), Postives = 67/132 (50.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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