IVF0023994 (gene) Melon (IVF77) v1

Overview


Name	IVF0023994
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	homeobox-leucine zipper protein HOX11
Location	chr04: 28775141 .. 28777519 (+)
RNA-Seq Expression	IVF0023994
Synteny	IVF0023994

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTCTTCAATCTTAAAAAGAAAAGAGAGAGATTCTTCTCTGAAATTGGTTTCTAGGAATAATAATGGTGGAGTTGGGTTTGAGCCTTGGTGATCATCCATCTTCCAATTCCAATAATAATACTAATAAGCCGTTTTCTAATTTTCTATCTAAACCAATTTCTTCTTCTTCTAATTCTTCTTCCTCTCTTATGGCTTTGGGGTTTTGTGTTGGTTTAATCGGACGTCATTCTGCTTCTGCTTCTGCTTCGGTTCAAGATGATGAAGAAGATGATGATGAGCTGGATGATGATGATGATCGGAAAACGGTTCTTGCCGGTTCAACTTCCGGTTTGGATCCACCGGTTCAGCTTGATCTTCTTCCTTTGGCTCCTGTTCCTCGTTCTTCTTCTTCTTCTTCTCCCCTGCTTCCTTTCCCATGGCTTTCTCATCACTGTATGTAAATACCGTTATTTATTATTCTTTTTTTATTTATTTTATGAGTTTTGCTAAAAATTACAACTTGGGAACTGGGTTCCTTTTCTTTTTTTCTTTCCTAAATTCAACAAATATCTCACATCATTTCATATCTCAATTTTTTTTTACGGAAATTCATTTCTTTTTTTCTTTTTTGTTGATGATTTGAGAATATATGAATGTTATTTTGTAGTGATGGGGGAAGTCGGGGGGAGTTCAGAGGGAGGAGAAAGGGTAGAGACATTGGATGTGAAGAGGGTGCTGGTGGAGGAGAGAGAAGATAGGGTGGCGGCGGTGGCAGTGGCGGCGTTGTCGTCTCCGAACAGTACGGTGTCATGTTTTGAAATGGAATTTGGAGGAGGAGGAGGAGGAGGGATTAGAAGGAAGAGATCATGGGATCATATGGAAATGGAAACGGAAAGAGGAGGAGGATCAGGAGGAGGTTGTTCAAGAATAATGAGTGATGATGAAGATAACAATGCTTCTGCTTCTGCTGCTGCTCGTAAAAGCTTCGACTTTCTAAACAACAATCCGCTTTTCTTGAAGAAAGCTTCAAAGAACACACCACTCTTAATCCTGTAAGTCTAAACACTTCCACAAAACTTAATCCAAGCATACCTTAAACTCCATATTCCATCTCTCTTAGCTTCTTTATTATACTTCTTCACTTGTCTTTCAAAAATAAGTTTTAAAATCTATTAATTGCTAAAACTAATTCAATTCCATATCTTAATTAGTTTGGATTACTTTGTGTTATTCTAATTTCCCTTGAGCTTAGCATTCCTTCACTAGGTTTTGGTTAATACTCATTTTGTTTTTAGTTTTCTGTTTTTCTATTTTATGTTTTACTTTCTTTTCTTATTCTCTCAATTATGATTTCATATTTTGTATATAAATTTTTGAATTCTTTTCAAAATTTAACTTCATTTTTTAGTAATATTTATAAGATTATTTTGTCTCTAAAAAAAAAAAAGACAAAGACAAAGTAGTCTTAATTGGCGGTGGTGGTTTTAAGAATGATATAAAGTCTATGAAATAAAATATTCATAAATTTTGTGTACTGAGTGTGTATATAAATGGAAAGAAAAAAAAACAAATAAATTTCAAATTTTTGGTATGGCCGAATAACAATAATCTTAATTTTTAATTTAATTTTCAGAAGCAGAAGCTAGCACTAGCAAAGCAGCTAAACCTCCGACCTAGGCAAGTGGAAGTATGGTTTCAAAACAGAAGAGCAAGGTACATAAATCTAATAAAAAGAAACAATCATTAATAATAATTGTACAATAAAAAAGATAGAGATGTAATTTATATATGTATTTAATTGTATGTGTATGTGTTTTTGTTTAGGACAAAGTTGAAGCAGACAGAAGTAGATTGTGAGTATTTAAGAAGATGCTGTGAGACATTGACAGAAGAGAACAGAAGATTACAAAAAGAACTTCAAGAATTAAGAGCTTTAAAAACTTCTCAGCCTTTTTATATGCAACTTCCAGCCACTACCCTCACCATGTGCCCCTCGTGTGAGCGTGTCGCTACCACCACCACCACTACCACCACCGCTCCCACCACCCCCGCCCCGTCCTCCGCTCTCTGTCTCGCTAACAAACCCAAGATCTTGCCATTTCCTCATCTGCATCAGGCTGCTTCATGAGCATTTTTATTCATCTCACATCATGAAATACAAAAAAGTTCTAGCGATGAGATAATTTTTGTACATATTTTTCCTTTTGATGGGGTTGGAGCTTTTGTGGGGAAAATTTTTCTTTTGTTTTTGGTTGTCTGTAGCTTTGAGATATATATATATATATGGACCTCTCCCTAGTTGTTCTTTTATCAGTTCTTTCGCTCTTGCATGCATGGTTATTTTTTAGGTTTTTTTCCTTTTGGGATATACAAAGTAATTTAAAAGAGTATAGGGAG

mRNA sequence

TTCTTCTTCAATCTTAAAAAGAAAAGAGAGAGATTCTTCTCTGAAATTGGTTTCTAGGAATAATAATGGTGGAGTTGGGTTTGAGCCTTGGTGATCATCCATCTTCCAATTCCAATAATAATACTAATAAGCCGTTTTCTAATTTTCTATCTAAACCAATTTCTTCTTCTTCTAATTCTTCTTCCTCTCTTATGGCTTTGGGGTTTTGTGTTGGTTTAATCGGACGTCATTCTGCTTCTGCTTCTGCTTCGGTTCAAGATGATGAAGAAGATGATGATGAGCTGGATGATGATGATGATCGGAAAACGGTTCTTGCCGGTTCAACTTCCGGTTTGGATCCACCGGTTCAGCTTGATCTTCTTCCTTTGGCTCCTGTTCCTCGTTCTTCTTCTTCTTCTTCTCCCCTGCTTCCTTTCCCATGGCTTTCTCATCACTTGATGGGGGAAGTCGGGGGGAGTTCAGAGGGAGGAGAAAGGGTAGAGACATTGGATGTGAAGAGGGTGCTGGTGGAGGAGAGAGAAGATAGGGTGGCGGCGGTGGCAGTGGCGGCGTTGTCGTCTCCGAACAGTACGGTGTCATGTTTTGAAATGGAATTTGGAGGAGGAGGAGGAGGAGGGATTAGAAGGAAGAGATCATGGGATCATATGGAAATGGAAACGGAAAGAGGAGGAGGATCAGGAGGAGGTTGTTCAAGAATAATGAGTGATGATGAAGATAACAATGCTTCTGCTTCTGCTGCTGCTCGTAAAAGCTTCGACTTTCTAAACAACAATCCGCTTTTCTTGAAGAAAGCTTCAAAGAACACACCACTCTTAATCCTAAGCAGAAGCTAGCACTAGCAAAGCAGCTAAACCTCCGACCTAGGCAAGTGGAAGTATGGTTTCAAAACAGAAGAGCAAGGACAAAGTTGAAGCAGACAGAAGTAGATTGTGAGTATTTAAGAAGATGCTGTGAGACATTGACAGAAGAGAACAGAAGATTACAAAAAGAACTTCAAGAATTAAGAGCTTTAAAAACTTCTCAGCCTTTTTATATGCAACTTCCAGCCACTACCCTCACCATGTGCCCCTCGTGTGAGCGTGTCGCTACCACCACCACCACTACCACCACCGCTCCCACCACCCCCGCCCCGTCCTCCGCTCTCTGTCTCGCTAACAAACCCAAGATCTTGCCATTTCCTCATCTGCATCAGGCTGCTTCATGAGCATTTTTATTCATCTCACATCATGAAATACAAAAAAGTTCTAGCGATGAGATAATTTTTGTACATATTTTTCCTTTTGATGGGGTTGGAGCTTTTGTGGGGAAAATTTTTCTTTTGTTTTTGGTTGTCTGTAGCTTTGAGATATATATATATATATGGACCTCTCCCTAGTTGTTCTTTTATCAGTTCTTTCGCTCTTGCATGCATGGTTATTTTTTAGGTTTTTTTCCTTTTGGGATATACAAAGTAATTTAAAAGAGTATAGGGAG

Coding sequence (CDS)

ATGGTGGAGTTGGGTTTGAGCCTTGGTGATCATCCATCTTCCAATTCCAATAATAATACTAATAAGCCGTTTTCTAATTTTCTATCTAAACCAATTTCTTCTTCTTCTAATTCTTCTTCCTCTCTTATGGCTTTGGGGTTTTGTGTTGGTTTAATCGGACGTCATTCTGCTTCTGCTTCTGCTTCGGTTCAAGATGATGAAGAAGATGATGATGAGCTGGATGATGATGATGATCGGAAAACGGTTCTTGCCGGTTCAACTTCCGGTTTGGATCCACCGGTTCAGCTTGATCTTCTTCCTTTGGCTCCTGTTCCTCGTTCTTCTTCTTCTTCTTCTCCCCTGCTTCCTTTCCCATGGCTTTCTCATCACTTGATGGGGGAAGTCGGGGGGAGTTCAGAGGGAGGAGAAAGGGTAGAGACATTGGATGTGAAGAGGGTGCTGGTGGAGGAGAGAGAAGATAGGGTGGCGGCGGTGGCAGTGGCGGCGTTGTCGTCTCCGAACAGTACGGTGTCATGTTTTGAAATGGAATTTGGAGGAGGAGGAGGAGGAGGGATTAGAAGGAAGAGATCATGGGATCATATGGAAATGGAAACGGAAAGAGGAGGAGGATCAGGAGGAGGTTGTTCAAGAATAATGAGTGATGATGAAGATAACAATGCTTCTGCTTCTGCTGCTGCTCGTAAAAGCTTCGACTTTCTAAACAACAATCCGCTTTTCTTGAAGAAAGCTTCAAAGAACACACCACTCTTAATCCTAAGCAGAAGCTAG

Protein sequence

MVELGLSLGDHPSSNSNNNTNKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRHSASASASVQDDEEDDDELDDDDDRKTVLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPLLPFPWLSHHLMGEVGGSSEGGERVETLDVKRVLVEEREDRVAAVAVAALSSPNSTVSCFEMEFGGGGGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNNASASAAARKSFDFLNNNPLFLKKASKNTPLLILSRS

Homology

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BLAST of IVF0023994 vs. ExPASy Swiss-Prot
Match: P46665 (Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana OX=3702 GN=HAT14 PE=2 SV=3)

HSP 1 Score: 49.3 bits (116), Expect = 7.5e-05
Identity = 75/241 (31.12%), Postives = 103/241 (42.74%), Query Frame = 0


Query: 2   VELGLSLGDHPSSNSNNNTNKPFSNFLSKPIS----SSSNSSSSLMALGFCVGL---IGR 61
           +EL LSLGD        NT K FS F+ K       S S++S+S   LGFC+ L    G 
Sbjct: 1   MELALSLGD--------NTKKQFS-FMEKNSKINNPSVSSTSTSEKDLGFCMALDVAFGG 60

Query: 62  H---SASASASVQDDEEDDDELDDDDDRKTVLAGSTSGLDPPVQLDLLPLAPVPRSSSSS 121
           H   S+S+S SV+D+++         D   V    +S +DPP+QL               
Sbjct: 61  HRSLSSSSSPSVEDEKKKPAPRAKKSDEFRV----SSSVDPPLQLQ-------------- 120

Query: 122 SPLLPFP-WLSHHLMGEVGGSSEGGERVETLDVKRVLVEEREDRVAAVAVAALSSPNSTV 181
              L FP WL  +  G  GG    G           +VEE E+   AV   ++S P+S  
Sbjct: 121 ---LHFPNWLPENSKGRQGGRMPLG--------AATVVEEEEEEEEAVPSMSVSPPDSVT 180

Query: 182 SCFEMEFGGGGGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNNASASAAARKSF 232
           S F+++FG    G  RR    D ++ E ER             D++D N S     R S 
Sbjct: 181 SSFQLDFGIKSYGYERRSNKRD-IDDEVERSASRASN-----EDNDDENGSTRKKLRLSK 197

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BLAST of IVF0023994 vs. ExPASy TrEMBL
Match: A0A1S3B7U4 (homeobox-leucine zipper protein HOX11 OS=Cucumis melo OX=3656 GN=LOC103486752 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.4e-118
Identity = 231/245 (94.29%), Postives = 234/245 (95.51%), Query Frame = 0


Query: 1   MVELGLSLGDHPSSNSNNNTNKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRHSASAS 60
           MVELGLSLGDHPSSNSNNNTNKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRHSASAS
Sbjct: 1   MVELGLSLGDHPSSNSNNNTNKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRHSASAS 60

Query: 61  ASVQDDEEDDDELDDDDDRKTVLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPLLPFPWL 120
           ASVQDDEEDDDELDDDDDRKTVLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPLLPFPWL
Sbjct: 61  ASVQDDEEDDDELDDDDDRKTVLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPLLPFPWL 120

Query: 121 SHHLMGEVGGSSEGGERVETLDVKRVLVEEREDRVAAVAVAALSSPNSTVSCFEMEFGGG 180
           SHHLMGEVGGSSEGGERVETLDVKRVLVEEREDRVAAVAVAALSSPNSTVSCFEMEFGGG
Sbjct: 121 SHHLMGEVGGSSEGGERVETLDVKRVLVEEREDRVAAVAVAALSSPNSTVSCFEMEFGGG 180

Query: 181 GGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNNASASAAARKSFDFLNNNPLFL 240
           GGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNNASASAAARK          FL
Sbjct: 181 GGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNNASASAAARKKLRLSKQQSAFL 240

Query: 241 KKASK 246
           +++ K
Sbjct: 241 EESFK 245

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BLAST of IVF0023994 vs. ExPASy TrEMBL
Match: A0A0A0LEE1 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G800720 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 3.0e-105
Identity = 223/254 (87.80%), Postives = 230/254 (90.55%), Query Frame = 0


Query: 1   MVELGLSLGDHPSSNSN-NNTNKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRH--SA 60
           MVELGLSLGDHPSSNSN NN  KPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRH  SA
Sbjct: 1   MVELGLSLGDHPSSNSNSNNKKKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRHSASA 60

Query: 61  SASASVQDDEEDD--DELDDDDDRKT-VLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPL 120
           SASASVQDDEED+  D+ DDDDDRKT VLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPL
Sbjct: 61  SASASVQDDEEDEEQDDEDDDDDRKTVVLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPL 120

Query: 121 LPFPWLSHHLMGEVGGSSEGGERVETLDVKRVLVEEREDRVAAVAVAALSSPNSTVSCFE 180
           LPFPWLSHHLMGEVGGSSEGGERVET+DVKRV+VEEREDRVAAVAVAALSSPNSTVSCFE
Sbjct: 121 LPFPWLSHHLMGEVGGSSEGGERVETVDVKRVVVEEREDRVAAVAVAALSSPNSTVSCFE 180

Query: 181 MEF---GGGGGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNNASASAAARKSFD 240
           MEF   GGGGGGGIRRKRSWDHMEMETERGGG GGGCSRIMSDDEDNNASASAAARK   
Sbjct: 181 MEFGGGGGGGGGGIRRKRSWDHMEMETERGGG-GGGCSRIMSDDEDNNASASAAARKKLR 240

Query: 241 FLNNNPLFLKKASK 246
                  FL+++ K
Sbjct: 241 LSKLQSAFLEESFK 253

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BLAST of IVF0023994 vs. ExPASy TrEMBL
Match: A0A5A7TK95 (Homeobox-leucine zipper protein HOX11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005300 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 2.5e-96
Identity = 189/203 (93.10%), Postives = 192/203 (94.58%), Query Frame = 0


Query: 43  MALGFCVGLIGRHSASASASVQDDEEDDDELDDDDDRKTVLAGSTSGLDPPVQLDLLPLA 102
           MALGFCVGLIGRHSASASASVQDDEEDDDELDDDDDRKTVLAGSTSGLDPPVQLDLLPLA
Sbjct: 1   MALGFCVGLIGRHSASASASVQDDEEDDDELDDDDDRKTVLAGSTSGLDPPVQLDLLPLA 60

Query: 103 PVPRSSSSSSPLLPFPWLSHHLMGEVGGSSEGGERVETLDVKRVLVEEREDRVAAVAVAA 162
           PVPRSSSSSSPLLPFPWLSHHLMGEVGGSSEGGERVETLDVKRVLVEEREDRVAAVAVAA
Sbjct: 61  PVPRSSSSSSPLLPFPWLSHHLMGEVGGSSEGGERVETLDVKRVLVEEREDRVAAVAVAA 120

Query: 163 LSSPNSTVSCFEMEFGGGGGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNNASA 222
           LSSPNSTVSCFEMEFGGGGGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNNASA
Sbjct: 121 LSSPNSTVSCFEMEFGGGGGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNNASA 180

Query: 223 SAAARKSFDFLNNNPLFLKKASK 246
           SAAARK          FL+++ K
Sbjct: 181 SAAARKKLRLSKQQSAFLEESFK 203

[Close]

BLAST of IVF0023994 vs. ExPASy TrEMBL
Match: A0A6J1DAZ1 (homeobox-leucine zipper protein HOX11 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019325 PE=3 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.5e-40
Identity = 141/266 (53.01%), Postives = 160/266 (60.15%), Query Frame = 0


Query: 2   VELGLSLGDHPSSNSNNNTNKPFSNFLSKPIS-SSSNSSSSLMALGFCVGLIGRHSASA- 61
           +EL LSLGD P++N     NKPF  FLSKP   SSS+S+S  MALGFCVGL  R SASA 
Sbjct: 1   MELALSLGDTPTNN-----NKPF-GFLSKPSKLSSSSSASPFMALGFCVGL-ARDSASAS 60

Query: 62  -------SASVQDD------EEDDDE---LDDDDDRKTVLAGSTSGLDPPVQLDLLPLAP 121
                  SAS+ DD      EEDDDE    +DDDD + +L GS SG DPPVQLDLLP AP
Sbjct: 61  ASGSGSGSASIHDDQGREVREEDDDEEEDEEDDDDERIILPGSGSGSDPPVQLDLLPPAP 120

Query: 122 VPRSSSSSSPLLPFPWLSHHLMGEVGGSSEGGERVETLDVKRV----LVEEREDRVAAVA 181
           VPRS  SSS  LPFPWLS HLM E G S  G ERV  LDV R+      EE +DR AA A
Sbjct: 121 VPRSHHSSSSHLPFPWLSDHLMAERGCSDGGAERV--LDVNRLPAVGPAEETDDR-AAAA 180

Query: 182 VAALSSPNSTVSCFEMEFGGGGGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNN 241
            A +SSPNS VS F+M+FG   GGG   KRS D  EMETER        SRI  DDE   
Sbjct: 181 AAGMSSPNSAVSSFQMDFGVRNGGG--SKRSSD-FEMETERAS------SRISDDDE--- 240

Query: 242 ASASAAARKSFDFLNNNPLFLKKASK 246
              + +ARK          FL+++ K
Sbjct: 241 ---NGSARKKLRLSKEQSAFLEESFK 241

[Close]

BLAST of IVF0023994 vs. ExPASy TrEMBL
Match: A0A6J1DDA9 (homeobox-leucine zipper protein HOX11 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019325 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 3.9e-36
Identity = 136/266 (51.13%), Postives = 155/266 (58.27%), Query Frame = 0


Query: 2   VELGLSLGDHPSSNSNNNTNKPFSNFLSKPIS-SSSNSSSSLMALGFCVGLIGRHSASA- 61
           +EL LSLGD P++N     NKPF  FLSKP   SSS+S+S  MALGFCVGL  R SASA 
Sbjct: 1   MELALSLGDTPTNN-----NKPF-GFLSKPSKLSSSSSASPFMALGFCVGL-ARDSASAS 60

Query: 62  -------SASVQDD------EEDDDE---LDDDDDRKTVLAGSTSGLDPPVQLDLLPLAP 121
                  SAS+ DD      EEDDDE    +DDDD + +L GS SG DPPVQLDLLP AP
Sbjct: 61  ASGSGSGSASIHDDQGREVREEDDDEEEDEEDDDDERIILPGSGSGSDPPVQLDLLPPAP 120

Query: 122 VPRSSSSSSPLLPFPWLSHHLMGEVGGSSEGGERVETLDVKRV----LVEEREDRVAAVA 181
           VPRS  SSS  LPFPWLS H          G ERV  LDV R+      EE +DR AA A
Sbjct: 121 VPRSHHSSSSHLPFPWLSDHY--------GGAERV--LDVNRLPAVGPAEETDDR-AAAA 180

Query: 182 VAALSSPNSTVSCFEMEFGGGGGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNN 241
            A +SSPNS VS F+M+FG   GGG   KRS D  EMETER        SRI  DDE   
Sbjct: 181 AAGMSSPNSAVSSFQMDFGVRNGGG--SKRSSD-FEMETERAS------SRISDDDE--- 233

Query: 242 ASASAAARKSFDFLNNNPLFLKKASK 246
              + +ARK          FL+++ K
Sbjct: 241 ---NGSARKKLRLSKEQSAFLEESFK 233

[Close]

BLAST of IVF0023994 vs. NCBI nr
Match: XP_008443033.1 (PREDICTED: homeobox-leucine zipper protein HOX11 [Cucumis melo])

HSP 1 Score: 431 bits (1109), Expect = 3.13e-149
Identity = 231/245 (94.29%), Postives = 234/245 (95.51%), Query Frame = 0


Query: 1   MVELGLSLGDHPSSNSNNNTNKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRHSASAS 60
           MVELGLSLGDHPSSNSNNNTNKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRHSASAS
Sbjct: 1   MVELGLSLGDHPSSNSNNNTNKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRHSASAS 60

Query: 61  ASVQDDEEDDDELDDDDDRKTVLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPLLPFPWL 120
           ASVQDDEEDDDELDDDDDRKTVLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPLLPFPWL
Sbjct: 61  ASVQDDEEDDDELDDDDDRKTVLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPLLPFPWL 120

Query: 121 SHHLMGEVGGSSEGGERVETLDVKRVLVEEREDRVAAVAVAALSSPNSTVSCFEMEFGGG 180
           SHHLMGEVGGSSEGGERVETLDVKRVLVEEREDRVAAVAVAALSSPNSTVSCFEMEFGGG
Sbjct: 121 SHHLMGEVGGSSEGGERVETLDVKRVLVEEREDRVAAVAVAALSSPNSTVSCFEMEFGGG 180

Query: 181 GGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNNASASAAARKSFDFLNNNPLFL 240
           GGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNNASASAAARK          FL
Sbjct: 181 GGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNNASASAAARKKLRLSKQQSAFL 240

Query: 241 KKASK 245
           +++ K
Sbjct: 241 EESFK 245

[Close]

BLAST of IVF0023994 vs. NCBI nr
Match: XP_004136729.2 (homeobox-leucine zipper protein HOX11 [Cucumis sativus] >KGN59289.1 hypothetical protein Csa_000905 [Cucumis sativus])

HSP 1 Score: 387 bits (995), Expect = 8.39e-132
Identity = 223/254 (87.80%), Postives = 230/254 (90.55%), Query Frame = 0


Query: 1   MVELGLSLGDHPSSNSN-NNTNKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRHSASA 60
           MVELGLSLGDHPSSNSN NN  KPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRHSASA
Sbjct: 1   MVELGLSLGDHPSSNSNSNNKKKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRHSASA 60

Query: 61  SAS--VQDDEEDD--DELDDDDDRKTV-LAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPL 120
           SAS  VQDDEED+  D+ DDDDDRKTV LAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPL
Sbjct: 61  SASASVQDDEEDEEQDDEDDDDDRKTVVLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPL 120

Query: 121 LPFPWLSHHLMGEVGGSSEGGERVETLDVKRVLVEEREDRVAAVAVAALSSPNSTVSCFE 180
           LPFPWLSHHLMGEVGGSSEGGERVET+DVKRV+VEEREDRVAAVAVAALSSPNSTVSCFE
Sbjct: 121 LPFPWLSHHLMGEVGGSSEGGERVETVDVKRVVVEEREDRVAAVAVAALSSPNSTVSCFE 180

Query: 181 MEFGGGGGGG---IRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNNASASAAARKSFD 240
           MEFGGGGGGG   IRRKRSWDHMEMETERGGG GGGCSRIMSDDEDNNASASAAARK   
Sbjct: 181 MEFGGGGGGGGGGIRRKRSWDHMEMETERGGG-GGGCSRIMSDDEDNNASASAAARKKLR 240

Query: 241 FLNNNPLFLKKASK 245
                  FL+++ K
Sbjct: 241 LSKLQSAFLEESFK 253

[Close]

BLAST of IVF0023994 vs. NCBI nr
Match: KAA0043744.1 (homeobox-leucine zipper protein HOX11 [Cucumis melo var. makuwa] >TYK25388.1 homeobox-leucine zipper protein HOX11 [Cucumis melo var. makuwa])

HSP 1 Score: 357 bits (917), Expect = 4.86e-122
Identity = 189/203 (93.10%), Postives = 192/203 (94.58%), Query Frame = 0


Query: 43  MALGFCVGLIGRHSASASASVQDDEEDDDELDDDDDRKTVLAGSTSGLDPPVQLDLLPLA 102
           MALGFCVGLIGRHSASASASVQDDEEDDDELDDDDDRKTVLAGSTSGLDPPVQLDLLPLA
Sbjct: 1   MALGFCVGLIGRHSASASASVQDDEEDDDELDDDDDRKTVLAGSTSGLDPPVQLDLLPLA 60

Query: 103 PVPRSSSSSSPLLPFPWLSHHLMGEVGGSSEGGERVETLDVKRVLVEEREDRVAAVAVAA 162
           PVPRSSSSSSPLLPFPWLSHHLMGEVGGSSEGGERVETLDVKRVLVEEREDRVAAVAVAA
Sbjct: 61  PVPRSSSSSSPLLPFPWLSHHLMGEVGGSSEGGERVETLDVKRVLVEEREDRVAAVAVAA 120

Query: 163 LSSPNSTVSCFEMEFGGGGGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNNASA 222
           LSSPNSTVSCFEMEFGGGGGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNNASA
Sbjct: 121 LSSPNSTVSCFEMEFGGGGGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNNASA 180

Query: 223 SAAARKSFDFLNNNPLFLKKASK 245
           SAAARK          FL+++ K
Sbjct: 181 SAAARKKLRLSKQQSAFLEESFK 203

[Close]

BLAST of IVF0023994 vs. NCBI nr
Match: XP_038905251.1 (homeobox-leucine zipper protein HOX11-like [Benincasa hispida])

HSP 1 Score: 262 bits (669), Expect = 1.29e-82
Identity = 181/252 (71.83%), Postives = 194/252 (76.98%), Query Frame = 0


Query: 2   VELGLSLGDHPSSNSNNNTNKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRHS--ASA 61
           +ELGLSLGDHP SNSN    KPF  FLSKP+SSSS  SSSLMALGFCVGLIG HS  ASA
Sbjct: 1   MELGLSLGDHPPSNSN----KPFG-FLSKPLSSSS--SSSLMALGFCVGLIGHHSTSASA 60

Query: 62  SASVQDDEEDDDELDDDD-DRKTVLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPLLPFP 121
           SASV DDEED+DE +DDD D+KTVL GSTSGLDPPVQLDLLPLAPVPRSSSSS   LPFP
Sbjct: 61  SASVHDDEEDEDEDEDDDNDQKTVLPGSTSGLDPPVQLDLLPLAPVPRSSSSS---LPFP 120

Query: 122 WLSHHLMGEVGGSSEGGERVETLDVKRVLV---EEREDRVAAVAVAALSSPNSTVSCFEM 181
           WLSHHLM EV  SSE GERVE LDV RV     EE ED+    AVAALSSPNSTVSCF+M
Sbjct: 121 WLSHHLMAEVE-SSERGERVE-LDVNRVAAAAAEETEDK----AVAALSSPNSTVSCFQM 180

Query: 182 EFGGGGGGGIRRKRSWDHMEME-TERGGGSGGGCSRIMSDDEDNNASASAAA-RKSFDFL 241
           EFG   GGGIRRKRSW+ MEME TER     GGCSR MSDD+DNNASA+AAA RK     
Sbjct: 181 EFGVRNGGGIRRKRSWE-MEMEITER-----GGCSR-MSDDDDNNASAAAAAARKKLRLS 229

Query: 242 NNNPLFLKKASK 245
                FL+++ K
Sbjct: 241 KQQSAFLEESFK 229

[Close]

BLAST of IVF0023994 vs. NCBI nr
Match: XP_022151365.1 (homeobox-leucine zipper protein HOX11 isoform X1 [Momordica charantia])

HSP 1 Score: 173 bits (438), Expect = 6.17e-48
Identity = 138/266 (51.88%), Postives = 159/266 (59.77%), Query Frame = 0


Query: 2   VELGLSLGDHPSSNSNNNTNKPFSNFLSKPIS-SSSNSSSSLMALGFCVGLIGRHSASAS 61
           +EL LSLGD P++N     NKPF  FLSKP   SSS+S+S  MALGFCVGL  R SASAS
Sbjct: 1   MELALSLGDTPTNN-----NKPFG-FLSKPSKLSSSSSASPFMALGFCVGL-ARDSASAS 60

Query: 62  AS--------VQDD------EEDDDELDD---DDDRKTVLAGSTSGLDPPVQLDLLPLAP 121
           AS        + DD      EEDDDE +D   DDD + +L GS SG DPPVQLDLLP AP
Sbjct: 61  ASGSGSGSASIHDDQGREVREEDDDEEEDEEDDDDERIILPGSGSGSDPPVQLDLLPPAP 120

Query: 122 VPRSSSSSSPLLPFPWLSHHLMGEVGGSSEGGERVETLDVKRVLV----EEREDRVAAVA 181
           VPRS  SSS  LPFPWLS HLM E G S  G ERV  LDV R+      EE +DR AA A
Sbjct: 121 VPRSHHSSSSHLPFPWLSDHLMAERGCSDGGAERV--LDVNRLPAVGPAEETDDRAAAAA 180

Query: 182 VAALSSPNSTVSCFEMEFGGGGGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNN 241
            A +SSPNS VS F+M+FG   GGG +R   +   EMETER        SRI  DDE+  
Sbjct: 181 -AGMSSPNSAVSSFQMDFGVRNGGGSKRSSDF---EMETER------ASSRISDDDEN-- 240

Query: 242 ASASAAARKSFDFLNNNPLFLKKASK 245
                +ARK          FL+++ K
Sbjct: 241 ----GSARKKLRLSKEQSAFLEESFK 241

[Close]

BLAST of IVF0023994 vs. TAIR 10
Match: AT5G06710.1 (homeobox from Arabidopsis thaliana )

HSP 1 Score: 49.3 bits (116), Expect = 5.4e-06
Identity = 75/241 (31.12%), Postives = 103/241 (42.74%), Query Frame = 0


Query: 2   VELGLSLGDHPSSNSNNNTNKPFSNFLSKPIS----SSSNSSSSLMALGFCVGL---IGR 61
           +EL LSLGD        NT K FS F+ K       S S++S+S   LGFC+ L    G 
Sbjct: 1   MELALSLGD--------NTKKQFS-FMEKNSKINNPSVSSTSTSEKDLGFCMALDVAFGG 60

Query: 62  H---SASASASVQDDEEDDDELDDDDDRKTVLAGSTSGLDPPVQLDLLPLAPVPRSSSSS 121
           H   S+S+S SV+D+++         D   V    +S +DPP+QL               
Sbjct: 61  HRSLSSSSSPSVEDEKKKPAPRAKKSDEFRV----SSSVDPPLQLQ-------------- 120

Query: 122 SPLLPFP-WLSHHLMGEVGGSSEGGERVETLDVKRVLVEEREDRVAAVAVAALSSPNSTV 181
              L FP WL  +  G  GG    G           +VEE E+   AV   ++S P+S  
Sbjct: 121 ---LHFPNWLPENSKGRQGGRMPLG--------AATVVEEEEEEEEAVPSMSVSPPDSVT 180

Query: 182 SCFEMEFGGGGGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNNASASAAARKSF 232
           S F+++FG    G  RR    D ++ E ER             D++D N S     R S 
Sbjct: 181 SSFQLDFGIKSYGYERRSNKRD-IDDEVERSASRASN-----EDNDDENGSTRKKLRLSK 197

[Close]

BLAST of IVF0023994 vs. TAIR 10
Match: AT5G06710.2 (homeobox from Arabidopsis thaliana )

HSP 1 Score: 49.3 bits (116), Expect = 5.4e-06
Identity = 75/241 (31.12%), Postives = 103/241 (42.74%), Query Frame = 0


Query: 2   VELGLSLGDHPSSNSNNNTNKPFSNFLSKPIS----SSSNSSSSLMALGFCVGL---IGR 61
           +EL LSLGD        NT K FS F+ K       S S++S+S   LGFC+ L    G 
Sbjct: 1   MELALSLGD--------NTKKQFS-FMEKNSKINNPSVSSTSTSEKDLGFCMALDVAFGG 60

Query: 62  H---SASASASVQDDEEDDDELDDDDDRKTVLAGSTSGLDPPVQLDLLPLAPVPRSSSSS 121
           H   S+S+S SV+D+++         D   V    +S +DPP+QL               
Sbjct: 61  HRSLSSSSSPSVEDEKKKPAPRAKKSDEFRV----SSSVDPPLQLQ-------------- 120

Query: 122 SPLLPFP-WLSHHLMGEVGGSSEGGERVETLDVKRVLVEEREDRVAAVAVAALSSPNSTV 181
              L FP WL  +  G  GG    G           +VEE E+   AV   ++S P+S  
Sbjct: 121 ---LHFPNWLPENSKGRQGGRMPLG--------AATVVEEEEEEEEAVPSMSVSPPDSVT 180

Query: 182 SCFEMEFGGGGGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNNASASAAARKSF 232
           S F+++FG    G  RR    D ++ E ER             D++D N S     R S 
Sbjct: 181 SSFQLDFGIKSYGYERRSNKRD-IDDEVERSASRASN-----EDNDDENGSTRKKLRLSK 197

The following BLAST results are available for this feature:

BLAST of IVF0023994 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46665	7.5e-05	31.12	Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana OX=3702 GN=HAT14 P...	[more]

BLAST of IVF0023994 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B7U4	1.4e-118	94.29	homeobox-leucine zipper protein HOX11 OS=Cucumis melo OX=3656 GN=LOC103486752 PE...	[more]
A0A0A0LEE1	3.0e-105	87.80	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G800720 PE...	[more]
A0A5A7TK95	2.5e-96	93.10	Homeobox-leucine zipper protein HOX11 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1DAZ1	1.5e-40	53.01	homeobox-leucine zipper protein HOX11 isoform X1 OS=Momordica charantia OX=3673 ...	[more]
A0A6J1DDA9	3.9e-36	51.13	homeobox-leucine zipper protein HOX11 isoform X2 OS=Momordica charantia OX=3673 ...	[more]

BLAST of IVF0023994 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443033.1	3.13e-149	94.29	PREDICTED: homeobox-leucine zipper protein HOX11 [Cucumis melo]	[more]
XP_004136729.2	8.39e-132	87.80	homeobox-leucine zipper protein HOX11 [Cucumis sativus] >KGN59289.1 hypothetical...	[more]
KAA0043744.1	4.86e-122	93.10	homeobox-leucine zipper protein HOX11 [Cucumis melo var. makuwa] >TYK25388.1 hom...	[more]
XP_038905251.1	1.29e-82	71.83	homeobox-leucine zipper protein HOX11-like [Benincasa hispida]	[more]
XP_022151365.1	6.17e-48	51.88	homeobox-leucine zipper protein HOX11 isoform X1 [Momordica charantia]	[more]

BLAST of IVF0023994 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06710.1	5.4e-06	31.12	homeobox from Arabidopsis thaliana	[more]
AT5G06710.2	5.4e-06	31.12	homeobox from Arabidopsis thaliana	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023994.2	IVF0023994.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000976	transcription cis-regulatory region binding