IVF0023942 (gene) Melon (IVF77) v1

Overview


Name	IVF0023942
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	KH domain-containing protein At4g18375-like
Location	chr08: 923976 .. 931862 (-)
RNA-Seq Expression	IVF0023942
Synteny	IVF0023942

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAAACCCTCGTAGTCCATATCTCCTACCATCGCAGTATTGGCGGCCTTCTGTCTGTGGTGGTGCCGCTACTTCGTTTCTTCGCCGAGGTACTTTTCTTCTATGTTCTTTTTCTCTTTCTCCGTGATGTTCACGGTGCTTTTAGCTGTTTCTATGAATTAGGGTTTTCTTTTTGCATTCCCTTCACACCAAGAATGCAAGTTTAGGAACATTCTAATGTGTTTCATTATTTAGTCCCTATTTAACCAGTGTCCTACTGCTACACGATTCATTCAACTTTCTTGGTTCTGGTGGAAACCCTAATTTTTCTTTCAAACTGGGAATGAGTTGAAATGCCTCGACTGGGTTGTGGTTGTGACTCGGTCGAAGACTTTCACGTTTTCGTAAGTTTCCATAAAACAAGGGTTTTTTTCCTCGCCAATTTTTGTACTCCGTGCTTACGTTCCATTATACAATCGAGTTTCATATTGTCTTGCTCTTTGCATATCTCGCTCTCTCGCTCTCTCTTTTTGGTGTGTGTGTGTGGGGGGGGGGGGGGGGGTAGGTTGCTTGAGGAACTAGACTGGTGATTAGGATCGAACATGATGTTTTTTGTATTATTTTTTTCATATAATAAGTGGTAGAAATCTCCATTGAGTGTATTTTCAGAATATTGTTCATTTTATTTTTTGCGGATGCAGATAAATTAAATTTTCAAAATGGTGAGTGGGAAGCGACCTTATGGTCAGAGGGACTATAATGGAGACAATAAGGGGTACAAGAGAAGGATTACTGAACAAGATGACTGGGTTAGTGATGAACTTGTTGTTTACCGAATACTTTGCCCTGATGAGGTCATTGGAAGTGTTATTGGTAAGAGCGGGAAAGTGATAAACTCAATAAGGCAAGAAACGAGGGCAAAGATTAAGGTGGTTGATCCGTTTCCTGGTGCTAAGGACCGTGTTATAAATATTCTGCTTCGTTAAGGATAAGGAGGATGTGGAAGTTGATGATGAGTTCAATGATAGGCAAACATTATGTGCAGCCCAAGATGCTCTTCTTAAAGTTCATGCTGCCATTGCTAATGCACTGGCTTCTGCTGGAGATTTAGACCGGAAACAGAGGGATAAGGAACAATGCCAATTCTTATCCCTTCAAGCCAATCTGCTAACGTCATTGGTAAAGCAGGATCGACTATAAAAAAGCTTAGAAGCAAGACGAGGACCAGTATAAAAATCAGCCCCAAGGATGCCACTGATCCAATTCATTCGTGTGCCATGGAATTTGACAATTTTGCTGTGGTATGTATATATGGCTCCCATTCAAACTTTATTTAGTATCACTGTTCACTGTTGATATCATGCACCTCCAATCCACGTGATATATTTGTTTTTTTTCCATGTGTATCAATTAACTATCAGCATGGAATCTCCATGTTTCTTGTTTCAAAATAAAATAAATAAGGACAGAAAGTTAAACAAACCAAATCCTATTATTGTCTACTATAAAAAAGCCTATTATTGGCATCATGCTTTACATGGTATCAGCATTGTCTACAATCGGGAGCCTGAGAACTTAACTGAGCTTTATAACTACATCTTTTTGGTGTGTGCTTGTGTGTAAATAAAAAACCATTCATTAGTATTTAAAATTATACCAAAAATGGTGATATTATGTAAATATCCATATTTTCTAAGCTCATAAAGTTGCAGAAGACTGGGTTTATTGCACATCTTTCTTTACCTCTCAATGTTTTGAGGTGAAAATACTGGGTATTTCTGTGTTTGGTTTATCTTTTGAAGACTACATGCCTAAGGAGTTCTTCAACCCATCAATAGACCTTGTACTCTACTTGGTATCTAGGTGGGTAGTTAGTCATCGGTTTTCACTGTAAAATGGAAATAATCACAAGTGCTTCCAATGATCTAGAGATATGTGACTTGGCAGATTTAAAATGTCTCTGTTACTTGAAATCAAGTAATTCATGTTGATGGTTTGACTGCCAAAAGTCCATCGTGCATTTGTCTTCTAGTTCTTATTATCCGTCTCTCTATCAACTTATAGATTCTTAACTTTCTGAGAAACAGGTCTCAAAGAACCAATGTTTTTTGTTAACTTTCCCATCTAACTCGCACTTTAAGAGGCTATAATGAGAAATATCAAATCCTGAATGAGAGTTGACTCTCTATTTCTGTTTCTTCTCAACAACTTTGTGGTGTTGTTTGCTGACCAACAACACCAAATTTCTTTTGTTTCTTTTGAGTAGATATCTGGAGAACCTGAGGGAGTAAGACGGGCATTGTTTGCAATATCTTCTATTATGTATAAGTTCCCTCCCAGAGAAGAGATTCCTCTTGATACAAATGTAAGCGAAGCCCCTCCTAATATAATTATCCCATCCGATGTCCCTCTGTATTCAGCAGGAGGACTATATCCAAGTGCAGATCCTATTCTTCCTCCCAGATCTATTCCACCGATGCTTGGTGCTCAACATGTTCAGGATCTTCATGATTACCCTGATAGTGGGAATGCATGGCCTCTTTATTCATCTGCTCTTCCTGTGGTTCCTGGTGGTATTAGTGGTCATCCTCCATCGGAGGAGTTGGTGGTTAGAGTATTATGCCCCTTTGATAACATTGGCCGTGTCATTGGTAAAGGTGGGGGTACCATTAAAAGCATAAGGCAAGCAAGTGGTGCTCGTGTGGAGGTGGATGACACCAAGCGTGATTGTGATGAATGCATTATTACTATCTCGTCATTTGAGGTACTATTCTTCTCTCACAAAATGCAAGAAGAGTTCTGCTCATCCAGTGCCTTCGATTTCTTTTTGGTTCTTTATATCATTTTGAAGGAGGTTTTATTTGCAAATTTTGGAATTAAATCAAAAAATGAATTTGTGCGTTGTAAATGGTTGGAATTTTAGAAGTGTTCTTCGTAATCTAAAAAATGAACATGGAAACTGGCTTTCTATGTATCCAAAGTAGTAGAGTTTCGATAATACATTTCTATTGCAAAAAAAAGAAAAAAAAAAGATTGAACTCCTGCTTACTTTGTAGTGTACCCTTTATTTTATTTGAAATATTGGCTTCGAGCCATCCGACAATCTGTAACATGATATTTAACTTGCTTAATGTATGTGAAGATTTACTTGGCGTTTTGTTCTTTTAGTTGCATTTCTTATTCATGCTTGAGCTGATTATTTATTTTAACTAATACATTTGCGCTGCTGTTTTTTTAATGTATTTTTCCAGTCCTTGGATGATCTGAAGTCAATGGCTGTTGAAACTGTGTTATTGCTGCAAGAGAAGATTAATGATGATGAAGGTGGTATGGTGATTATGAGACTACTTATTCCATCTAAAGTTATTGGTTGTATTATAGGAAAAAGTGGTTCAATCATCAATGAGATTCGGAAGTCAACTAGAGCTGATATCCGTATTTCTAAGGGTGACAAACTTAAGTGTGCTTCTTCCAGTGATGAACTTGTTGAGGTTTGCTTTATGAATCTTAATTAGTGCTTAATGCTGAATGCAGTATTGCTTGCACCACACTTCTGATTTTGAATGATTTTTTGCAGGTAACTGGTAAAGTTGGCTGTGTGAGAGATGCATTGGTCCAGATTGTGTTAAGGCTTCGTGATGATGCTTTGAAAGAGAGGGATGTTGGTCATAACTCTGCTATCGTTACTGATTCAATGTACACATCAGGTTCCAGTTTTTCAATGCCATCTGTCTTGCCTTCTGTTTCTCCTGGGGCTCCACCAATGGGCTATGATCAGAGGGCTGAAAGTGGTAGTGGATTAAGTGTTCTCTCTTCAAGTGGCCTATATGGATATGGATCACTGTCGGTAGGTGTCGTAAGCAAACTTTTGATATTGTGGGACATAAGTACTTTTCTTTTTTGCAAACAGTTATATAATTGCTGCTCAGGCCTTTTTGGAAAAACAAATTTGTTTTGTACCAAAGAGATGATGAGGTCAGCATTTGTCATATTGTGATGTTTGAGGGAGGCAGACAGCTTCAGCATTTTTTTTCCTTATAAGAGATAGCTTCAACTTTTATTTCGGTATCTGTGTGTTTTTCTTTTTTTCTTTCTTTTTTTTTTTGGGGGGGGGGGGGGGGGTGTGTTAGATAATTTAGTATGGTTATCTTTAATGGATATCTTTCTGGTGATAATGAAGGGAATTTCTTTCTTATTTTTCTGTTATTTTCTTGCATATTAAAACCTCTTTCTGTACTTTTATCAGATGGGAGACAATGGCTATGGATCCATGTCCTCATATTCATCCAAGTTGTATGGAGGGTATGTGCCACCTTATTTTATTTTGGAATGCAAATTGTATGTTTTATTTATTTCATTCACGTATCAATTGGTAACCATCGTTTTTACGTTTATTGTTTTCATTACAGGCTGCCTCCTCCATCTTCTCTCGAGATGTTGATCCCAGCAAATGCAGCTGGTAAAGTAATTGGAAAGGAGGGGCTAATATTGCCAACATTAGGAAGGTTGGTTTGTTGTTGTCTACATTTCATTATTATTGATTACTTTTCTATGACTTTTTTTTATGTGGACGTGTTAGGATGTTCAAGTTTAATTTTTTTCTAATAGCATAATTCCTACTCTGGTCAATTGGAGAACAGTTCTAACATCACACCAGGTATATGTTCATGTATGATGAAAAAGTAAAAGAATTCCGAGTCTACTTGGATAGTGTTCATTCTCTATTTTTCATTTTTAGGTTTAGATCTTCATAGGGTGTATATGTGAACTTTTTCCCCTCCCCTTTGTAAGGGTGTGTTTGGCCCAATGGTTTTGGAATAGGGAAGTATCGGTCTAAAACTTTTTAAGATATTGACAATTATCTGTACTGATGTTTATTCTTGTTACAAGGCTTTTTTGAGTAGTGAGAATATAACACTCTTACTTGTTCGTTGTTCAGATATCTGGAGCGTTGATAGAGATCTCAGACTCTAAGTCATCTCGAGGTGATCGCATTGCTCTTATATCTGGTACATCTGAACAGAAGCGCACGGCTGAAAACTTGATTCAGGCATTTATAATGGCTACATGAGAAGAAAGATGACTTTTTTGGAAGTTACTAGATGAAAATCTTCCATATCTGATCGTCCTCTGTAGATCTCCCTAGGTTCAGTTCTGGAGAAGGGTTCCTCTTTTAGCCTTCAAATTCTTCAGTTTTTTTCCCCATTAAATGCGCAACAAGATGAAATGGGAGGATCTACAGCAGGTTCATATCTAGGGTTCCTAGAGCTTTTGTTTCTTAATCTATTCTTCTGTGGATTCTTAGAACTTTTAGGATCTTTCCTTTCATACTTGTATGTCTGGCCTTATCTTTTATCAGTTGGGAGTTCTCATTTCCTATGCTGTCATACTCGCATTATATGATGATTATGCCAGATGAGTTCCAGGATGGTCGTTATTCTCAATCTTATAACTGTGTACAATATTTTTCTGTCCATTCTGTCTCCTACTCGTTTTCTTGGTGGACGAAGTTTTCAATCATTGATCATTAATCTCAATGCATTTGGTGTTGCTCTTGCCTATGATAGAGCTTTATAACTATGACAGTGCACCTCAAGAGAAGAGATCGTTTCCAGAACTTAACTAAAGTGATCATCATAGAAGTTTCTCATTTGATTCCTTGTTCTGTACTTCATGTCACGACTCCTAATTTGTTGGTAGGTTGGTGCCAAATAGCATCATAAATTCTGTGTTTTTTTGCCTCTGATATTAATGCCTTCTCTGATGCCCTTTATTAATAGTCAACAGTGAAATTTTCCAAAATACATGAACTATAGAGCTGGGCCTGAAATTCCTTGGACATATAAGATTAGGTTCAGAGTGTGAGAAAGATCATTCCCCGAATTCTGATTCCCTCATAATATGCTCACTCCATTTTCTTGAGAGGAATTTTGAGAGAATTCTCATTTGGAGGAGCATGGGGGTTTGTTGCTCTTCACTTCTGGTTGCAAGTTTCTTTCATTGTCTTAGGTGATTCAACAGAGAGGTCTGTCATAAGTTCTATTTTCTTCATTAATTTCATGCAATTACCTGGGTTTTTTTATTACTCCTTATACAGAAAATAAGGGCTTTTTTGGTGTGGAGGATTTTTTTTAAGAAAGTGTTCTTCATAATGTTCTTAAAGTTATATTTTGGAAGGATCTCTTCTTTGCTTTTATCAATTTTTATAACTCGAAAACTAAAAAACTTTTTATAGTTTTTTCAAGAAGTGTCAAAAATACATTTCAAACAGAAAAACAATCTATTGATGATGTTTTACACACATACAAGCACGTGTATTTCTGATTTTCACCTTTCAAAAAGATAACTTTTTATCTTCAACCATTGATTAGTTATAATTATTGAGCGATGTTATAGCTACTTGTGAAACTTGAGAGTTCTTTCAAAGGAGAAAAAAATAATCATCAAGGGGTTTAGAATGATGATACTTCTCTGCCCTTGTTTTCAATTCCTTCTGTAATCACTCTACTGTGTGGTCGTGTAGTGTTTTCTTGTGTCAATTTCTCTCTCCCACTCTCTCATGTCTACTTTATTCTCATAACAATAATAACTTCTAATTTCTAAAAGGGATTTTGTGAAGAACGGGTGGTTAGGCTTACTCCGTTGGTGTTATTCTGTAAGATGTTCCCACAGCCTAATCATCTTCTGTTTATTCTGTAATCCCTTCTGAGGAATTTGTCCTCTGAGGAGGTTGTTTAGCATTCATATTGATGTCATGCAAATAAATTATATGAATACATGTGAGTAAGCCTAACCATTTTAAGATTAAAGTATCTCCCTCGTTTATCAAAGGTCATGACTTGATTTTAAGAAATGATCCGATCAATGATAAGCTAATGTGTTCCAAACCATGTATCATTAGAGCAACGAAGTCCTATTTTAATGTTAACTTCCATTTTTCCCTAGACTGCTCACTATCACTGTGACTTAAAACGATGGGATGTTCCCACACTCTCATATGTTTTCCTAGTGCATGATCCACTATTTTTGTACATTCCTGAAGTTGATAGTAATTCTTGCACAGATCTTGCTCCATGTTAAAATTAGGATGTCTGCTATTTTGCCCTAGACTATTGGGATATTCCAGTGCTTTGAACAGACAATTGTGCTCTATGCCACATTCTTTTCTGTTCGGTATCTTAGCTCTTCATTCAATTATTTTCCTGTACCAATCCAACATAAATATAAACTTCGGGAACTTGGCAAAATTGTCTAATTACAATGATATCGTTTGCCAATCTGCTTCCCTTTGATGTTAGTGTTAGTTTTCTTTTACAAGTCAATTAGTAGCCTCACAAGTATAGATGGCCTCGTAGCAGTCAACTAGTAGCCTCACAAGTATAGTTGGCCTGGTAACGGTCAACTAGTAGCCTCACAAGTGTAACTGGCCTTTGTTACAATTATCTTTTAGCCTTCTACTGGACGGAATTATCCGTAGCATGATGGCTTATAGTGGCATGTGTGGGCTAGGTATGCGTTTTGGTTTTCATTATCAAATCTCTTTTATGTATACCAAGGTTGGCTCTACTCTTATTGTGCCTTTCTAATGTTAAGGAAATAGGAAGTTCTGTGAAATAGGATGACATTGGATGAAAGTGACGTTAGGACTAGAATTAGAAAAACTTATGTAGCAAAATATAGTCATGAATAACCTTAAGGCAGTTAGATCCGTAGCGAACACTTGGTTTTGATCTCATCATCAAAGATAATTTGTTGTGGGGTTTTCTGTTTTTTTTGTTCTTTTTTCTTTAAATTATGAAGTTAATGTAATCATTATTTTTTAAGGCTGAAATTGCCCACTTTTTATTTGATTCAAGGATAAAAAAAAAGTAATTATTATCTTTGAATCTGTTCTTTGGTAGTTTGGAGG

mRNA sequence

GTAAACCCTCGTAGTCCATATCTCCTACCATCGCAGTATTGGCGGCCTTCTGTCTGTGGTGGTGCCGCTACTTCGTTTCTTCGCCGAGATAAATTAAATTTTCAAAATGGTGAGTGGGAAGCGACCTTATGGTCAGAGGGACTATAATGGAGACAATAAGGGGTACAAGAGAAGGATTACTGAACAAGATGACTGGGTTAGTGATGAACTTGTTGTTTACCGAATACTTTGCCCTGATGAGGTCATTGGAAGTGTTATTGGTAAGAGCGGGAAAGTGATAAACTCAATAAGGCAAGAAACGAGGGCAAAGATTAAGGTGGTTGATCCGTTTCCTGGTGCTAAGGACCGTGTTATAAATATTCTGCTTCGTTAAGGATAAGGAGGATGTGGAAGTTGATGATGAGTTCAATGATAGGCAAACATTATGTGCAGCCCAAGATGCTCTTCTTAAAGTTCATGCTGCCATTGCTAATGCACTGGCTTCTGCTGGAGATTTAGACCGGAAACAGAGGGATAAGGAACAATGCCAATTCTTATCCCTTCAAGCCAATCTGCTAACGTCATTGGTAAAGCAGGATCGACTATAAAAAAGCTTAGAAGCAAGACGAGGACCAGTATAAAAATCAGCCCCAAGGATGCCACTGATCCAATTCATTCGTGTGCCATGGAATTTGACAATTTTGCTGTGATATCTGGAGAACCTGAGGGAGTAAGACGGGCATTGTTTGCAATATCTTCTATTATGTATAAGTTCCCTCCCAGAGAAGAGATTCCTCTTGATACAAATGTAAGCGAAGCCCCTCCTAATATAATTATCCCATCCGATGTCCCTCTGTATTCAGCAGGAGGACTATATCCAAGTGCAGATCCTATTCTTCCTCCCAGATCTATTCCACCGATGCTTGGTGCTCAACATGTTCAGGATCTTCATGATTACCCTGATAGTGGGAATGCATGGCCTCTTTATTCATCTGCTCTTCCTGTGGTTCCTGGTGGTATTAGTGGTCATCCTCCATCGGAGGAGTTGGTGGTTAGAGTATTATGCCCCTTTGATAACATTGGCCGTGTCATTGGTAAAGGTGGGGGTACCATTAAAAGCATAAGGCAAGCAAGTGGTGCTCGTGTGGAGGTGGATGACACCAAGCGTGATTGTGATGAATGCATTATTACTATCTCGTCATTTGAGTCCTTGGATGATCTGAAGTCAATGGCTGTTGAAACTGTGTTATTGCTGCAAGAGAAGATTAATGATGATGAAGGTGGTATGGTGATTATGAGACTACTTATTCCATCTAAAGTTATTGGTTGTATTATAGGAAAAAGTGGTTCAATCATCAATGAGATTCGGAAGTCAACTAGAGCTGATATCCGTATTTCTAAGGGTGACAAACTTAAGTGTGCTTCTTCCAGTGATGAACTTGTTGAGGTAACTGGTAAAGTTGGCTGTGTGAGAGATGCATTGGTCCAGATTGTGTTAAGGCTTCGTGATGATGCTTTGAAAGAGAGGGATGTTGGTCATAACTCTGCTATCGTTACTGATTCAATGTACACATCAGGTTCCAGTTTTTCAATGCCATCTGTCTTGCCTTCTGTTTCTCCTGGGGCTCCACCAATGGGCTATGATCAGAGGGCTGAAAGTGGTAGTGGATTAAGTGTTCTCTCTTCAAGTGGCCTATATGGATATGGATCACTGTCGATGGGAGACAATGGCTATGGATCCATGTCCTCATATTCATCCAAGTTGTATGGAGGGCTGCCTCCTCCATCTTCTCTCGAGATGTTGATCCCAGCAAATGCAGCTGGTAAAGTAATTGGAAAGGAGGGGCTAATATTGCCAACATTAGGAAGATATCTGGAGCGTTGATAGAGATCTCAGACTCTAAGTCATCTCGAGGTGATCGCATTGCTCTTATATCTGGTACATCTGAACAGAAGCGCACGGCTGAAAACTTGATTCAGGCATTTATAATGGCTACATGAGAAGAAAGATGACTTTTTTGGAAGTTACTAGATGAAAATCTTCCATATCTGATCGTCCTCTGTAGATCTCCCTAGGTTCAGTTCTGGAGAAGGGTTCCTCTTTTAGCCTTCAAATTCTTCAGTTTTTTTCCCCATTAAATGCGCAACAAGATGAAATGGGAGGATCTACAGCAGGTTCATATCTAGGGTTCCTAGAGCTTTTGTTTCTTAATCTATTCTTCTGTGGATTCTTAGAACTTTTAGGATCTTTCCTTTCATACTTGTATGTCTGGCCTTATCTTTTATCAGTTGGGAGTTCTCATTTCCTATGCTGTCATACTCGCATTATATGATGATTATGCCAGATGAGTTCCAGGATGGTCGTTATTCTCAATCTTATAACTGTGTACAATATTTTTCTGTCCATTCTGTCTCCTACTCGTTTTCTTGGTGGACGAAGTTTTCAATCATTGATCATTAATCTCAATGCATTTGGTGTTGCTCTTGCCTATGATAGAGCTTTATAACTATGACAGTGCACCTCAAGAGAAGAGATCGTTTCCAGAACTTAACTAAAGTGATCATCATAGAAGTTTCTCATTTGATTCCTTGTTCTGTACTTCATGTCACGACTCCTAATTTGTTGGTAGGTTGGTGCCAAATAGCATCATAAATTCTGTGTTTTTTTGCCTCTGATATTAATGCCTTCTCTGATGCCCTTTATTAATAGTCAACAGTGAAATTTTCCAAAATACATGAACTATAGAGCTGGGCCTGAAATTCCTTGGACATATAAGATTAGGTTCAGAGTGTGAGAAAGATCATTCCCCGAATTCTGATTCCCTCATAATATGCTCACTCCATTTTCTTGAGAGGAATTTTGAGAGAATTCTCATTTGGAGGAGCATGGGGGTTTGTTGCTCTTCACTTCTGGTTGCAAGTTTCTTTCATTGTCTTAGGTGATTCAACAGAGAGGTCTGTCATAAGTTCTATTTTCTTCATTAATTTCATGCAATTACCTGGGTTTTTTTATTACTCCTTATACAGAAAATAAGGGCTTTTTTGGTGTGGAGGATTTTTTTTAAGAAAGTGTTCTTCATAATGTTCTTAAAGTTATATTTTGGAAGGATCTCTTCTTTGCTTTTATCAATTTTTATAACTCGAAAACTAAAAAACTTTTTATAGTTTTTTCAAGAAGTGTCAAAAATACATTTCAAACAGAAAAACAATCTATTGATGATGTTTTACACACATACAAGCACGTGTATTTCTGATTTTCACCTTTCAAAAAGATAACTTTTTATCTTCAACCATTGATTAGTTATAATTATTGAGCGATGTTATAGCTACTTGTGAAACTTGAGAGTTCTTTCAAAGGAGAAAAAAATAATCATCAAGGGGTTTAGAATGATGATACTTCTCTGCCCTTGTTTTCAATTCCTTCTGTAATCACTCTACTGTGTGGTCGTGTAGTGTTTTCTTGTGTCAATTTCTCTCTCCCACTCTCTCATGTCTACTTTATTCTCATAACAATAATAACTTCTAATTTCTAAAAGGGATTTTGTGAAGAACGGGTGGTTAGGCTTACTCCGTTGGTGTTATTCTGTAAGATGTTCCCACAGCCTAATCATCTTCTGTTTATTCTGTAATCCCTTCTGAGGAATTTGTCCTCTGAGGAGGTTGTTTAGCATTCATATTGATGTCATGCAAATAAATTATATGAATACATGTGAGTAAGCCTAACCATTTTAAGATTAAAGTATCTCCCTCGTTTATCAAAGGTCATGACTTGATTTTAAGAAATGATCCGATCAATGATAAGCTAATGTGTTCCAAACCATGTATCATTAGAGCAACGAAGTCCTATTTTAATGTTAACTTCCATTTTTCCCTAGACTGCTCACTATCACTGTGACTTAAAACGATGGGATGTTCCCACACTCTCATATGTTTTCCTAGTGCATGATCCACTATTTTTGTACATTCCTGAAGTTGATAGTAATTCTTGCACAGATCTTGCTCCATGTTAAAATTAGGATGTCTGCTATTTTGCCCTAGACTATTGGGATATTCCAGTGCTTTGAACAGACAATTGTGCTCTATGCCACATTCTTTTCTGTTCGGTATCTTAGCTCTTCATTCAATTATTTTCCTGTACCAATCCAACATAAATATAAACTTCGGGAACTTGGCAAAATTGTCTAATTACAATGATATCGTTTGCCAATCTGCTTCCCTTTGATGTTAGTGTTAGTTTTCTTTTACAAGTCAATTAGTAGCCTCACAAGTATAGATGGCCTCGTAGCAGTCAACTAGTAGCCTCACAAGTATAGTTGGCCTGGTAACGGTCAACTAGTAGCCTCACAAGTGTAACTGGCCTTTGTTACAATTATCTTTTAGCCTTCTACTGGACGGAATTATCCGTAGCATGATGGCTTATAGTGGCATGTGTGGGCTAGGTATGCGTTTTGGTTTTCATTATCAAATCTCTTTTATGTATACCAAGGTTGGCTCTACTCTTATTGTGCCTTTCTAATGTTAAGGAAATAGGAAGTTCTGTGAAATAGGATGACATTGGATGAAAGTGACGTTAGGACTAGAATTAGAAAAACTTATGTAGCAAAATATAGTCATGAATAACCTTAAGGCAGTTAGATCCGTAGCGAACACTTGGTTTTGATCTCATCATCAAAGATAATTTGTTGTGGGGTTTTCTGTTTTTTTTGTTCTTTTTTCTTTAAATTATGAAGTTAATGTAATCATTATTTTTTAAGGCTGAAATTGCCCACTTTTTATTTGATTCAAGGATAAAAAAAAAGTAATTATTATCTTTGAATCTGTTCTTTGGTAGTTTGGAGG

Coding sequence (CDS)

ATGCCAATTCTTATCCCTTCAAGCCAATCTGCTAACGTCATTGGTAAAGCAGGATCGACTATAAAAAAGCTTAGAAGCAAGACGAGGACCAGTATAAAAATCAGCCCCAAGGATGCCACTGATCCAATTCATTCGTGTGCCATGGAATTTGACAATTTTGCTGTGATATCTGGAGAACCTGAGGGAGTAAGACGGGCATTGTTTGCAATATCTTCTATTATGTATAAGTTCCCTCCCAGAGAAGAGATTCCTCTTGATACAAATGTAAGCGAAGCCCCTCCTAATATAATTATCCCATCCGATGTCCCTCTGTATTCAGCAGGAGGACTATATCCAAGTGCAGATCCTATTCTTCCTCCCAGATCTATTCCACCGATGCTTGGTGCTCAACATGTTCAGGATCTTCATGATTACCCTGATAGTGGGAATGCATGGCCTCTTTATTCATCTGCTCTTCCTGTGGTTCCTGGTGGTATTAGTGGTCATCCTCCATCGGAGGAGTTGGTGGTTAGAGTATTATGCCCCTTTGATAACATTGGCCGTGTCATTGGTAAAGGTGGGGGTACCATTAAAAGCATAAGGCAAGCAAGTGGTGCTCGTGTGGAGGTGGATGACACCAAGCGTGATTGTGATGAATGCATTATTACTATCTCGTCATTTGAGTCCTTGGATGATCTGAAGTCAATGGCTGTTGAAACTGTGTTATTGCTGCAAGAGAAGATTAATGATGATGAAGGTGGTATGGTGATTATGAGACTACTTATTCCATCTAAAGTTATTGGTTGTATTATAGGAAAAAGTGGTTCAATCATCAATGAGATTCGGAAGTCAACTAGAGCTGATATCCGTATTTCTAAGGGTGACAAACTTAAGTGTGCTTCTTCCAGTGATGAACTTGTTGAGGTAACTGGTAAAGTTGGCTGTGTGAGAGATGCATTGGTCCAGATTGTGTTAAGGCTTCGTGATGATGCTTTGAAAGAGAGGGATGTTGGTCATAACTCTGCTATCGTTACTGATTCAATGTACACATCAGGTTCCAGTTTTTCAATGCCATCTGTCTTGCCTTCTGTTTCTCCTGGGGCTCCACCAATGGGCTATGATCAGAGGGCTGAAAGTGGTAGTGGATTAAGTGTTCTCTCTTCAAGTGGCCTATATGGATATGGATCACTGTCGATGGGAGACAATGGCTATGGATCCATGTCCTCATATTCATCCAAGTTGTATGGAGGGCTGCCTCCTCCATCTTCTCTCGAGATGTTGATCCCAGCAAATGCAGCTGGTAAAGTAATTGGAAAGGAGGGGCTAATATTGCCAACATTAGGAAGATATCTGGAGCGTTGA

Protein sequence

MPILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEGVRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIIIPSDVPLYSAGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKINDDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDELVEVTGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMYTSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYGSMSSYSSKLYGGLPPPSSLEMLIPANAAGKVIGKEGLILPTLGRYLER

Homology

[Close]

BLAST of IVF0023942 vs. ExPASy Swiss-Prot
Match: P58223 (KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18375 PE=2 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.1e-99
Identity = 222/453 (49.01%), Postives = 294/453 (64.90%), Query Frame = 0


Query: 3   ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEG 62
           +L+P SQS+++IGKAG  IK++R +TR S+K+  KD +DP H CAME+DN  VISGEPE 
Sbjct: 143 LLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPES 202

Query: 63  VRRALFAISSIMYKFPPREEIPLDTNVSEAP-PNIIIPSDV--PLYSAGGLYPSADPILP 122
           V++ALFA+S+IMYK  PRE IPLD+   + P  ++I+PSD+   +Y   G Y + D IL 
Sbjct: 203 VKQALFAVSAIMYKINPRENIPLDSTSQDVPAASVIVPSDLSNSVYPQTGFYSNQDHILQ 262

Query: 123 P-RSIPPMLGAQHVQDLHDYPD-SGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFD 182
               +P    A  V D   Y + + N  P+++S+LPV   G  G   SEELV +VLCP  
Sbjct: 263 QGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPVT-HGFGGSSRSEELVFKVLCPLC 322

Query: 183 NIGRVIGKGGGTIKSIRQASGARVEVDDTKRDC--DECIITISSFESLDDLKSMAVETVL 242
           NI RVIGKGG TIK IR+ASG+ +EV+D++  C  DEC+I +++ ES DD+KSMAVE VL
Sbjct: 323 NIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVL 382

Query: 243 LLQEKINDDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASS 302
           LLQE IND++   V M+LL+ SKVIGC+IGKSGS+INEIRK T A+I ISKG K      
Sbjct: 383 LLQEYINDEDAENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKGKK------ 442

Query: 303 SDELVEVTGKVGCVRDALVQIVLRLRDDALKERD---VGHNSAIVTDSMYTSGSS---FS 362
            D+LVEV+G+V  VRDAL+QIVLRLR+D L ++D        A   +  + SGSS   ++
Sbjct: 443 -DDLVEVSGEVSSVRDALIQIVLRLREDVLGDKDSVATRKPPARTDNCSFLSGSSNAGYT 502

Query: 363 MPSVLPSVSPGAPPMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYGSMSSYSSKLYG 422
           +PS + S++                     S+SG +GYGS   GDN  GS   YS   YG
Sbjct: 503 LPSFMSSMA---------------------STSGFHGYGSFPAGDNVLGSTGPYS---YG 562

Query: 423 GLPPPSSLEMLIPANAAGKVIGKEGLILPTLGR 443
            LP  S+LE+LIPA+A  KV+GK G  L  + R
Sbjct: 563 RLPSSSALEILIPAHAMSKVMGKGGGNLENIRR 563

[Close]

BLAST of IVF0023942 vs. ExPASy Swiss-Prot
Match: Q8W4B1 (RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN=RCF3 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 6.7e-25
Identity = 120/431 (27.84%), Postives = 206/431 (47.80%), Query Frame = 0


Query: 13  VIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEGVRRALFAISS 72
           ++GK G  I+++R +T+T I+I P+++  P   C    +    I GE   V+ AL  +SS
Sbjct: 190 LLGKGGKIIEQMRIETKTHIRILPRESNLP--RCVSLSEEIVQIVGELNAVKNALAIVSS 249

Query: 73  IMYKFPPREEIPLDTNVSEAPPNIIIPSDVPLYSAGGLYPSADPILPP--RSIPPMLGAQ 132
            + +   R+        S +P           ++A G     D  +P   R         
Sbjct: 250 RLRESQHRDRSNFQGR-SHSPER--------SFAAAG-----DDYMPQLRRQSSDRFPRG 309

Query: 133 HVQDLHDYPDSGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFDNIGRVIGKGGGTI 192
           + ++ +      N    Y+   P VP G + +  SEELV ++LCP D I RV+G+  G I
Sbjct: 310 NFRNNNFSSRQSN----YAEEAPAVPVGENVY--SEELVFQILCPADKIVRVVGESQGII 369

Query: 193 KSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIND---DEGG 252
             ++   G  V V D     DE IITISS E+ DD    A E +L +Q +I D   D+  
Sbjct: 370 DLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDLIPDKDN 429

Query: 253 MVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKL-KCASSSDELVEVTGKV 312
           ++  RLL+PS+   C+ GK+GS ++EI + T   ++I   +++ +CAS +D ++++TG++
Sbjct: 430 LITTRLLVPSRDSICLEGKAGS-VSEISRLTGTSVQILAREEIPRCASINDVVIQITGEI 489

Query: 313 GCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMYTSGSSFSMPSVLPSVSPGAPPMGY 372
              R+ALV++ L LR    KE          T    T+G    +  V+   S        
Sbjct: 490 RAAREALVELTLLLRSHMFKELSQKETPPASTS---TTGPLEGVAGVMEVASSNNTIQSR 549

Query: 373 DQRAESGSGLSVLSS---SGLYGYGSLS-MGDNGY-GSMSSYSSKLYGGLPPPSSLEMLI 432
           +    S   L  +S+       G+GS++  G++ +   +   +S++   L   S+LE+++
Sbjct: 550 EGPTSSNLNLQQVSTILPQFKEGFGSVAKAGESEHREEVPVTTSRMAVPLVTRSTLEVVL 594

[Close]

BLAST of IVF0023942 vs. ExPASy Swiss-Prot
Match: F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 9.1e-22
Identity = 80/257 (31.13%), Postives = 139/257 (54.09%), Query Frame = 0


Query: 163 PPSE------ELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIIT 222
           PPSE      ++V ++LC  +N G VIG GG  ++ +   +GA + V +T  DC+E +I 
Sbjct: 441 PPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIA 500

Query: 223 ISSFESLDDLKSMAVETVLLLQEKIND-------DEG--GMVIMRLLIPSKVIGCIIGKS 282
           +++ E+ +   S A + ++L+  ++ +       D G    +  RL++P+  IGC++GK 
Sbjct: 501 VTASENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKG 560

Query: 283 GSIINEIRKSTRADIRISKGDK-LKCASSSDELVEVTGKVGCVRDALVQIVLRLRD---- 342
           G I++E+RK+T A I+I K ++  KC S +D++V++TG+   VR+A+  I  RLRD    
Sbjct: 561 GVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFS 620

Query: 343 DALKERDVGHNSAIVTDSMY--TSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLSVLS 398
           +++K      +SA+ T+  Y   S +  S+ S     +P        +R+E     S LS
Sbjct: 621 NSMKNSLAKSSSALTTERFYDRQSDNPLSIGSHQSVSNPATNSSSLHRRSED----SFLS 680

[Close]

BLAST of IVF0023942 vs. ExPASy Swiss-Prot
Match: P57722 (Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3)

HSP 1 Score: 75.9 bits (185), Expect = 1.3e-12
Identity = 83/331 (25.08%), Postives = 147/331 (44.41%), Query Frame = 0


Query: 124 PPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFDNIGRVI 183
           PP+L    +  L  +P+      + S    V  GG+     +  L +R+L     +G +I
Sbjct: 10  PPILPHSTLGTLSHHPELHFGGKMESK---VSEGGL-----NVTLTIRLLMHGKEVGSII 69

Query: 184 GKGGGTIKSIRQASGARVEVDDTKRDCDECIITISS-----FESLDDLKSMAVETVLLLQ 243
           GK G T+K +R+ SGAR+ +  ++ +C E I+TI+      F++   +     E ++   
Sbjct: 70  GKKGETVKKMREESGARINI--SEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSM 129

Query: 244 EKINDDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDE 303
                     V +RL++P+   G +IGK GS I EIR+ST A ++++ GD L   +S++ 
Sbjct: 130 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDML--PNSTER 189

Query: 304 LVEVTGKVGCVRDALVQIVLRLRDDALKERDVGHN-SAIVTDSMYTSGSSFSM------- 363
            V ++G    +   + QI + + +   K   + +      T  ++  G ++++       
Sbjct: 190 AVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIP 249

Query: 364 -PSVLPSVSPGA------PPMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYGSMSSY 423
            P  L  +   A      PP+G    A  G  L + SS             N  G  S  
Sbjct: 250 HPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSS---------EEAQNLMGQSSGL 309

Query: 424 SSKLYGGLPPPSSLEMLIPANAAGKVIGKEG 435
            +      PP S+ E+ IP +  G +IG++G
Sbjct: 310 DAS-----PPASTHELTIPNDLIGCIIGRQG 313

[Close]

BLAST of IVF0023942 vs. ExPASy Swiss-Prot
Match: P57721 (Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2)

HSP 1 Score: 74.7 bits (182), Expect = 2.9e-12
Identity = 74/287 (25.78%), Postives = 131/287 (45.64%), Query Frame = 0


Query: 168 LVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISS-----FES 227
           L +R+L     +G +IGK G T+K +R+ SGAR+ +  ++ +C E I+TI+      F++
Sbjct: 46  LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI--SEGNCPERIVTITGPTDAIFKA 105

Query: 228 LDDLKSMAVETVLLLQEKINDDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADI 287
              +     E ++             V +RL++P+   G +IGK GS I EIR+ST A +
Sbjct: 106 FAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQV 165

Query: 288 RISKGDKLKCASSSDELVEVTGKVGCVRDALVQIVLRLRDDALKERDVGHN-SAIVTDSM 347
           +++ GD L   +S++  V ++G    +   + QI + + +   K   + +      T  +
Sbjct: 166 QVA-GDML--PNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVI 225

Query: 348 YTSGSSFSM--------PSVLPSVSPGA------PPMGYDQRAESGSGLSVLSSSGLYGY 407
           +  G ++++        P  L  +   A      PP+G    A  G  L + SS      
Sbjct: 226 FAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSS------ 285

Query: 408 GSLSMGDNGYGSMSSYSSKLYGGLPPPSSLEMLIPANAAGKVIGKEG 435
                  N  G  S   +      PP S+ E+ IP +  G +IG++G
Sbjct: 286 ---EEAQNLMGQSSGLDAS-----PPASTHELTIPNDLIGCIIGRQG 313

[Close]

BLAST of IVF0023942 vs. ExPASy TrEMBL
Match: A0A1S3AZT7 (KH domain-containing protein At4g18375-like OS=Cucumis melo OX=3656 GN=LOC103484357 PE=4 SV=1)

HSP 1 Score: 836.6 bits (2160), Expect = 4.7e-239
Identity = 431/432 (99.77%), Postives = 431/432 (99.77%), Query Frame = 0


Query: 3   ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEG 62
           ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEG
Sbjct: 143 ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEG 202

Query: 63  VRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIIIPSDVPLYSAGGLYPSADPILPPRS 122
           VRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIIIPSDVPLYSAGGLYPSADPILPPRS
Sbjct: 203 VRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIIIPSDVPLYSAGGLYPSADPILPPRS 262

Query: 123 IPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFDNIGRV 182
           IPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFDNIGRV
Sbjct: 263 IPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFDNIGRV 322

Query: 183 IGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIN 242
           IGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIN
Sbjct: 323 IGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIN 382

Query: 243 DDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDELVEV 302
           DDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDELVEV
Sbjct: 383 DDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDELVEV 442

Query: 303 TGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMYTSGSSFSMPSVLPSVSPGAP 362
           TGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMYTSGSSFSMPSVLPSVSPGAP
Sbjct: 443 TGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMYTSGSSFSMPSVLPSVSPGAP 502

Query: 363 PMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYGSMSSYSSKLYGGLPPPSSLEMLIP 422
           PMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYGSMSSYSSKLYGGLPPPSSLEMLIP
Sbjct: 503 PMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYGSMSSYSSKLYGGLPPPSSLEMLIP 562

Query: 423 ANAAGKVIGKEG 435
           ANAAGKVIGK G
Sbjct: 563 ANAAGKVIGKGG 574

[Close]

BLAST of IVF0023942 vs. ExPASy TrEMBL
Match: A0A5D3CPJ5 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009130 PE=4 SV=1)

HSP 1 Score: 836.6 bits (2160), Expect = 4.7e-239
Identity = 431/432 (99.77%), Postives = 431/432 (99.77%), Query Frame = 0


Query: 3   ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEG 62
           ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEG
Sbjct: 143 ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEG 202

Query: 63  VRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIIIPSDVPLYSAGGLYPSADPILPPRS 122
           VRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIIIPSDVPLYSAGGLYPSADPILPPRS
Sbjct: 203 VRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIIIPSDVPLYSAGGLYPSADPILPPRS 262

Query: 123 IPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFDNIGRV 182
           IPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFDNIGRV
Sbjct: 263 IPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFDNIGRV 322

Query: 183 IGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIN 242
           IGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIN
Sbjct: 323 IGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIN 382

Query: 243 DDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDELVEV 302
           DDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDELVEV
Sbjct: 383 DDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDELVEV 442

Query: 303 TGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMYTSGSSFSMPSVLPSVSPGAP 362
           TGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMYTSGSSFSMPSVLPSVSPGAP
Sbjct: 443 TGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMYTSGSSFSMPSVLPSVSPGAP 502

Query: 363 PMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYGSMSSYSSKLYGGLPPPSSLEMLIP 422
           PMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYGSMSSYSSKLYGGLPPPSSLEMLIP
Sbjct: 503 PMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYGSMSSYSSKLYGGLPPPSSLEMLIP 562

Query: 423 ANAAGKVIGKEG 435
           ANAAGKVIGK G
Sbjct: 563 ANAAGKVIGKGG 574

[Close]

BLAST of IVF0023942 vs. ExPASy TrEMBL
Match: A0A0A0KIM3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G523980 PE=4 SV=1)

HSP 1 Score: 819.3 bits (2115), Expect = 7.8e-234
Identity = 421/432 (97.45%), Postives = 427/432 (98.84%), Query Frame = 0


Query: 3   ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEG 62
           ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAM+FDNFAVI+GEPEG
Sbjct: 143 ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAGEPEG 202

Query: 63  VRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIIIPSDVPLYSAGGLYPSADPILPPRS 122
           VRRALFAISSIMYKFPPREEIPLDTNV+EAPPNIIIPSDVPLYSAGGLYPSADPILPPRS
Sbjct: 203 VRRALFAISSIMYKFPPREEIPLDTNVNEAPPNIIIPSDVPLYSAGGLYPSADPILPPRS 262

Query: 123 IPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFDNIGRV 182
           IPPMLGAQHVQDLHDYP+SGNAWPLYSS+LPVVPGGISGHPPSEELVVRVLCPFDNIGRV
Sbjct: 263 IPPMLGAQHVQDLHDYPESGNAWPLYSSSLPVVPGGISGHPPSEELVVRVLCPFDNIGRV 322

Query: 183 IGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIN 242
           IGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIN
Sbjct: 323 IGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIN 382

Query: 243 DDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDELVEV 302
           DDEGG VIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDELVEV
Sbjct: 383 DDEGGTVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDELVEV 442

Query: 303 TGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMYTSGSSFSMPSVLPSVSPGAP 362
           TGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMY+SGSSFSMPSVLPSVSPGAP
Sbjct: 443 TGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMYSSGSSFSMPSVLPSVSPGAP 502

Query: 363 PMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYGSMSSYSSKLYGGLPPPSSLEMLIP 422
           PMGYDQRAESGSGL VLSSSGLYG GSLSMGDNGYG MSSYSSKLYGGLPPPSSLEMLIP
Sbjct: 503 PMGYDQRAESGSGLGVLSSSGLYGSGSLSMGDNGYGYMSSYSSKLYGGLPPPSSLEMLIP 562

Query: 423 ANAAGKVIGKEG 435
           ANAAGKVIGK G
Sbjct: 563 ANAAGKVIGKGG 574

[Close]

BLAST of IVF0023942 vs. ExPASy TrEMBL
Match: A0A6J1EJK7 (KH domain-containing protein At4g18375-like OS=Cucurbita moschata OX=3662 GN=LOC111433193 PE=4 SV=1)

HSP 1 Score: 768.8 bits (1984), Expect = 1.2e-218
Identity = 391/432 (90.51%), Postives = 414/432 (95.83%), Query Frame = 0


Query: 3   ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEG 62
           +LIPSSQSANVIGKAGSTIKKLRSKTRTSI+I PKDA+DPIHSCAMEFDNF +I+GEP+G
Sbjct: 143 VLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDASDPIHSCAMEFDNFVMIAGEPDG 202

Query: 63  VRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIIIPSDVPLYSAGGLYPSADPILPPRS 122
           VRRALFAISSIMYKFPPREEIPLDTNV+EAPP+IIIPSDVPLYS GGLYPSADPILPPRS
Sbjct: 203 VRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPSDVPLYSTGGLYPSADPILPPRS 262

Query: 123 IPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFDNIGRV 182
           IPPMLGAQHVQDLHDYPD+GNAWPLYSSALP+V   IS HPPSEELV+R+LCP DNIGRV
Sbjct: 263 IPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMV-SSISSHPPSEELVIRLLCPLDNIGRV 322

Query: 183 IGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIN 242
           IGKGGGTIKSIRQASGA VEVDD+KRDCDEC+ITISSFESLDDLKSMAVETVLLLQEKIN
Sbjct: 323 IGKGGGTIKSIRQASGACVEVDDSKRDCDECLITISSFESLDDLKSMAVETVLLLQEKIN 382

Query: 243 DDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDELVEV 302
           DDEGGMVIMRLL+PSKVIGCIIGKSGSIINEIRKS+RADIRISKGDK+KCA+++DELVEV
Sbjct: 383 DDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRADIRISKGDKIKCAAANDELVEV 442

Query: 303 TGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMYTSGSSFSMPSVLPSVSPGAP 362
           TG VG VRDALVQIVLRLRDDALKERDVGHN A+ TDSMY+SGSSFSMPSVLPSVSPGAP
Sbjct: 443 TGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSMYSSGSSFSMPSVLPSVSPGAP 502

Query: 363 PMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYGSMSSYSSKLYGGLPPPSSLEMLIP 422
           PMGYDQRAESGSGL  LSSS +YGYGSLSMGDNGYGSM SYSSKLYGGLPPPSSLEMLIP
Sbjct: 503 PMGYDQRAESGSGLGALSSSSIYGYGSLSMGDNGYGSMPSYSSKLYGGLPPPSSLEMLIP 562

Query: 423 ANAAGKVIGKEG 435
           ANAAGKVIGK G
Sbjct: 563 ANAAGKVIGKGG 573

[Close]

BLAST of IVF0023942 vs. ExPASy TrEMBL
Match: A0A6J1IP47 (KH domain-containing protein At4g18375-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478672 PE=4 SV=1)

HSP 1 Score: 765.8 bits (1976), Expect = 1.0e-217
Identity = 390/432 (90.28%), Postives = 413/432 (95.60%), Query Frame = 0


Query: 3   ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEG 62
           +LIPSSQSANVIGKAGSTIKKLRSKTRTSI+I PKDA+DPIHSCAMEFDNF +I+G+P+G
Sbjct: 143 VLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDASDPIHSCAMEFDNFVMIAGDPDG 202

Query: 63  VRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIIIPSDVPLYSAGGLYPSADPILPPRS 122
           VRRALFAISSIMYKFPPREEIPLDTNV+EAPP+IIIPSDVPLYS GGLYPSADPILPPRS
Sbjct: 203 VRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPSDVPLYSTGGLYPSADPILPPRS 262

Query: 123 IPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFDNIGRV 182
           IPPMLGAQHVQDLHDYPD+GNAWPLYSSALP+V   IS HPPSEELVVR+LCP DNIGRV
Sbjct: 263 IPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMV-SSISSHPPSEELVVRLLCPLDNIGRV 322

Query: 183 IGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIN 242
           IGKGGGTIKSIRQASGA VEVDD+KRDCDEC+ITISSFE LDDLKSMAVETVLLLQEKIN
Sbjct: 323 IGKGGGTIKSIRQASGACVEVDDSKRDCDECLITISSFEYLDDLKSMAVETVLLLQEKIN 382

Query: 243 DDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDELVEV 302
           DDEGGMVIMRLL+PSKVIGCIIGKSGSIINEIRKS+RADIRISKGDK+KCA+++DELVEV
Sbjct: 383 DDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRADIRISKGDKIKCAAANDELVEV 442

Query: 303 TGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMYTSGSSFSMPSVLPSVSPGAP 362
           TG VG VRDALVQIVLRLRDDALKERDVGHN A+ TDSMY+SGSSFSMPSVLPSVSPGAP
Sbjct: 443 TGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSMYSSGSSFSMPSVLPSVSPGAP 502

Query: 363 PMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYGSMSSYSSKLYGGLPPPSSLEMLIP 422
           PMGYDQRAESGSGL  LSSS +YGYGSLSMGDNGYGSM SYSSKLYGGLPPPSSLEMLIP
Sbjct: 503 PMGYDQRAESGSGLGALSSSSIYGYGSLSMGDNGYGSMPSYSSKLYGGLPPPSSLEMLIP 562

Query: 423 ANAAGKVIGKEG 435
           ANAAGKVIGK G
Sbjct: 563 ANAAGKVIGKGG 573

[Close]

BLAST of IVF0023942 vs. NCBI nr
Match: XP_008439619.1 (PREDICTED: KH domain-containing protein At4g18375-like [Cucumis melo] >XP_016899275.1 PREDICTED: KH domain-containing protein At4g18375-like [Cucumis melo] >KAA0052534.1 KH domain-containing protein [Cucumis melo var. makuwa] >TYK13292.1 KH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 829 bits (2141), Expect = 4.29e-299
Identity = 431/432 (99.77%), Postives = 431/432 (99.77%), Query Frame = 0


Query: 3   ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEG 62
           ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEG
Sbjct: 143 ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEG 202

Query: 63  VRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIIIPSDVPLYSAGGLYPSADPILPPRS 122
           VRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIIIPSDVPLYSAGGLYPSADPILPPRS
Sbjct: 203 VRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIIIPSDVPLYSAGGLYPSADPILPPRS 262

Query: 123 IPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFDNIGRV 182
           IPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFDNIGRV
Sbjct: 263 IPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFDNIGRV 322

Query: 183 IGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIN 242
           IGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIN
Sbjct: 323 IGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIN 382

Query: 243 DDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDELVEV 302
           DDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDELVEV
Sbjct: 383 DDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDELVEV 442

Query: 303 TGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMYTSGSSFSMPSVLPSVSPGAP 362
           TGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMYTSGSSFSMPSVLPSVSPGAP
Sbjct: 443 TGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMYTSGSSFSMPSVLPSVSPGAP 502

Query: 363 PMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYGSMSSYSSKLYGGLPPPSSLEMLIP 422
           PMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYGSMSSYSSKLYGGLPPPSSLEMLIP
Sbjct: 503 PMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYGSMSSYSSKLYGGLPPPSSLEMLIP 562

Query: 423 ANAAGKVIGKEG 434
           ANAAGKVIGK G
Sbjct: 563 ANAAGKVIGKGG 574

[Close]

BLAST of IVF0023942 vs. NCBI nr
Match: XP_004134572.1 (KH domain-containing protein At4g18375 [Cucumis sativus] >XP_011658295.1 KH domain-containing protein At4g18375 [Cucumis sativus] >KGN49408.1 hypothetical protein Csa_003700 [Cucumis sativus])

HSP 1 Score: 811 bits (2096), Expect = 3.02e-292
Identity = 421/432 (97.45%), Postives = 427/432 (98.84%), Query Frame = 0


Query: 3   ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEG 62
           ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAM+FDNFAVI+GEPEG
Sbjct: 143 ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAGEPEG 202

Query: 63  VRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIIIPSDVPLYSAGGLYPSADPILPPRS 122
           VRRALFAISSIMYKFPPREEIPLDTNV+EAPPNIIIPSDVPLYSAGGLYPSADPILPPRS
Sbjct: 203 VRRALFAISSIMYKFPPREEIPLDTNVNEAPPNIIIPSDVPLYSAGGLYPSADPILPPRS 262

Query: 123 IPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFDNIGRV 182
           IPPMLGAQHVQDLHDYP+SGNAWPLYSS+LPVVPGGISGHPPSEELVVRVLCPFDNIGRV
Sbjct: 263 IPPMLGAQHVQDLHDYPESGNAWPLYSSSLPVVPGGISGHPPSEELVVRVLCPFDNIGRV 322

Query: 183 IGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIN 242
           IGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIN
Sbjct: 323 IGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIN 382

Query: 243 DDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDELVEV 302
           DDEGG VIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDELVEV
Sbjct: 383 DDEGGTVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDELVEV 442

Query: 303 TGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMYTSGSSFSMPSVLPSVSPGAP 362
           TGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMY+SGSSFSMPSVLPSVSPGAP
Sbjct: 443 TGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMYSSGSSFSMPSVLPSVSPGAP 502

Query: 363 PMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYGSMSSYSSKLYGGLPPPSSLEMLIP 422
           PMGYDQRAESGSGL VLSSSGLYG GSLSMGDNGYG MSSYSSKLYGGLPPPSSLEMLIP
Sbjct: 503 PMGYDQRAESGSGLGVLSSSGLYGSGSLSMGDNGYGYMSSYSSKLYGGLPPPSSLEMLIP 562

Query: 423 ANAAGKVIGKEG 434
           ANAAGKVIGK G
Sbjct: 563 ANAAGKVIGKGG 574

[Close]

BLAST of IVF0023942 vs. NCBI nr
Match: XP_038883624.1 (KH domain-containing protein At4g18375-like [Benincasa hispida])

HSP 1 Score: 776 bits (2005), Expect = 2.11e-278
Identity = 405/433 (93.53%), Postives = 419/433 (96.77%), Query Frame = 0


Query: 3   ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEG 62
           ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKI+PKDATDPIHSCAMEFDNFAVI+GEPEG
Sbjct: 143 ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKITPKDATDPIHSCAMEFDNFAVIAGEPEG 202

Query: 63  VRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIIIPSDVPLYSAGGLYPSADPILPPRS 122
           VRRALFAISSIMYKFPPREEIPLDTNV+EAP NIIIPSDVPLYSAGGLYPSADPILPPRS
Sbjct: 203 VRRALFAISSIMYKFPPREEIPLDTNVNEAPSNIIIPSDVPLYSAGGLYPSADPILPPRS 262

Query: 123 IPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFDNIGRV 182
           IPPMLGAQHVQDLHDYPD+G+AWPLYSS LPVVPG ISGHPPSEELV+RVLCPFDNIGRV
Sbjct: 263 IPPMLGAQHVQDLHDYPDTGSAWPLYSSTLPVVPG-ISGHPPSEELVIRVLCPFDNIGRV 322

Query: 183 IGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIN 242
           IGKGGGTIKSIRQA+GARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIN
Sbjct: 323 IGKGGGTIKSIRQATGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIN 382

Query: 243 DDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDELVEV 302
           DDEGG VI+RLLIPSKVIGCIIGKSGSIINEIRK TRADIRISKGDK+KCA++SDELVEV
Sbjct: 383 DDEGGTVIIRLLIPSKVIGCIIGKSGSIINEIRKYTRADIRISKGDKIKCATASDELVEV 442

Query: 303 TGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMYTSGSSFSMPSVLPSVSPGAP 362
           TGKVG VRDALVQIVLRLRDDALKERDV HN A+VTDSMY+SGSSFSMPSVLPSVSPGAP
Sbjct: 443 TGKVGSVRDALVQIVLRLRDDALKERDVSHNPAVVTDSMYSSGSSFSMPSVLPSVSPGAP 502

Query: 363 PMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYGSM-SSYSSKLYGGLPPPSSLEMLI 422
           PMGYDQR ESGSGL VLSSS LYGYGSLS+GDNGYGSM SSY SKLYGGLPPPSSLEMLI
Sbjct: 503 PMGYDQRVESGSGLGVLSSSSLYGYGSLSIGDNGYGSMMSSYPSKLYGGLPPPSSLEMLI 562

Query: 423 PANAAGKVIGKEG 434
           PANAAGKVIGK G
Sbjct: 563 PANAAGKVIGKGG 574

[Close]

BLAST of IVF0023942 vs. NCBI nr
Match: XP_022925920.1 (KH domain-containing protein At4g18375-like [Cucurbita moschata])

HSP 1 Score: 761 bits (1966), Expect = 1.74e-272
Identity = 391/432 (90.51%), Postives = 414/432 (95.83%), Query Frame = 0


Query: 3   ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEG 62
           +LIPSSQSANVIGKAGSTIKKLRSKTRTSI+I PKDA+DPIHSCAMEFDNF +I+GEP+G
Sbjct: 143 VLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDASDPIHSCAMEFDNFVMIAGEPDG 202

Query: 63  VRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIIIPSDVPLYSAGGLYPSADPILPPRS 122
           VRRALFAISSIMYKFPPREEIPLDTNV+EAPP+IIIPSDVPLYS GGLYPSADPILPPRS
Sbjct: 203 VRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPSDVPLYSTGGLYPSADPILPPRS 262

Query: 123 IPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFDNIGRV 182
           IPPMLGAQHVQDLHDYPD+GNAWPLYSSALP+V   IS HPPSEELV+R+LCP DNIGRV
Sbjct: 263 IPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMV-SSISSHPPSEELVIRLLCPLDNIGRV 322

Query: 183 IGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIN 242
           IGKGGGTIKSIRQASGA VEVDD+KRDCDEC+ITISSFESLDDLKSMAVETVLLLQEKIN
Sbjct: 323 IGKGGGTIKSIRQASGACVEVDDSKRDCDECLITISSFESLDDLKSMAVETVLLLQEKIN 382

Query: 243 DDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDELVEV 302
           DDEGGMVIMRLL+PSKVIGCIIGKSGSIINEIRKS+RADIRISKGDK+KCA+++DELVEV
Sbjct: 383 DDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRADIRISKGDKIKCAAANDELVEV 442

Query: 303 TGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMYTSGSSFSMPSVLPSVSPGAP 362
           TG VG VRDALVQIVLRLRDDALKERDVGHN A+ TDSMY+SGSSFSMPSVLPSVSPGAP
Sbjct: 443 TGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSMYSSGSSFSMPSVLPSVSPGAP 502

Query: 363 PMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYGSMSSYSSKLYGGLPPPSSLEMLIP 422
           PMGYDQRAESGSGL  LSSS +YGYGSLSMGDNGYGSM SYSSKLYGGLPPPSSLEMLIP
Sbjct: 503 PMGYDQRAESGSGLGALSSSSIYGYGSLSMGDNGYGSMPSYSSKLYGGLPPPSSLEMLIP 562

Query: 423 ANAAGKVIGKEG 434
           ANAAGKVIGK G
Sbjct: 563 ANAAGKVIGKGG 573

[Close]

BLAST of IVF0023942 vs. NCBI nr
Match: KAG6581437.1 (KH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 761 bits (1966), Expect = 1.74e-272
Identity = 391/432 (90.51%), Postives = 414/432 (95.83%), Query Frame = 0


Query: 3   ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEG 62
           +LIPSSQSANVIGKAGSTIKKLRSKTRTSI+I PKDA+DPIHSCAMEFDNF +I+GEP+G
Sbjct: 143 VLIPSSQSANVIGKAGSTIKKLRSKTRTSIRIIPKDASDPIHSCAMEFDNFVMIAGEPDG 202

Query: 63  VRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIIIPSDVPLYSAGGLYPSADPILPPRS 122
           VRRALFAISSIMYKFPPREEIPLDTNV+EAPP+IIIPSDVPLYS GGLYPSADPILPPRS
Sbjct: 203 VRRALFAISSIMYKFPPREEIPLDTNVNEAPPSIIIPSDVPLYSTGGLYPSADPILPPRS 262

Query: 123 IPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFDNIGRV 182
           IPPMLGAQHVQDLHDYPD+GNAWPLYSSALP+V   IS HPPSEELV+R+LCP DNIGRV
Sbjct: 263 IPPMLGAQHVQDLHDYPDTGNAWPLYSSALPMV-SSISSHPPSEELVIRLLCPLDNIGRV 322

Query: 183 IGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEKIN 242
           IGKGGGTIKSIRQASGA VEVDD+KRDCDEC+ITISSFESLDDLKSMAVETVLLLQEKIN
Sbjct: 323 IGKGGGTIKSIRQASGACVEVDDSKRDCDECLITISSFESLDDLKSMAVETVLLLQEKIN 382

Query: 243 DDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASSSDELVEV 302
           DDEGGMVIMRLL+PSKVIGCIIGKSGSIINEIRKS+RADIRISKGDK+KCA+++DELVEV
Sbjct: 383 DDEGGMVIMRLLVPSKVIGCIIGKSGSIINEIRKSSRADIRISKGDKIKCAAANDELVEV 442

Query: 303 TGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMYTSGSSFSMPSVLPSVSPGAP 362
           TG VG VRDALVQIVLRLRDDALKERDVGHN A+ TDSMY+SGSSFSMPSVLPSVSPGAP
Sbjct: 443 TGNVGSVRDALVQIVLRLRDDALKERDVGHNLAVGTDSMYSSGSSFSMPSVLPSVSPGAP 502

Query: 363 PMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYGSMSSYSSKLYGGLPPPSSLEMLIP 422
           PMGYDQRAESGSGL  LSSS +YGYGSLSMGDNGYGSM SYSSKLYGGLPPPSSLEMLIP
Sbjct: 503 PMGYDQRAESGSGLGALSSSSIYGYGSLSMGDNGYGSMPSYSSKLYGGLPPPSSLEMLIP 562

Query: 423 ANAAGKVIGKEG 434
           ANAAGKVIGK G
Sbjct: 563 ANAAGKVIGKGG 573

[Close]

BLAST of IVF0023942 vs. TAIR 10
Match: AT5G46190.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 417.5 bits (1072), Expect = 1.3e-116
Identity = 238/460 (51.74%), Postives = 320/460 (69.57%), Query Frame = 0


Query: 3   ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEG 62
           +L+PSSQ + VIGK+GS IK +R +TR ++K+  KD +DP H+CAM+FDN  +ISGE E 
Sbjct: 154 LLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGETES 213

Query: 63  VRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIIIPSDVPLYSAGGLYPSADPILPPRS 122
           V++ALFA+S+IMYK  PRE+IPLDT V E P +IIIPSD+ +Y   GLYPS D I     
Sbjct: 214 VKKALFAVSAIMYKVSPREQIPLDTTVQEVPASIIIPSDLSIYPQAGLYPSQDSIF---- 273

Query: 123 IPPMLGAQHVQDLHDY---------PDSGNAWPLYS-SALPVVPGGISGHPPSEELVVRV 182
                  QH  ++  +          ++ N  P++S SALPVV  G  G   SE+L ++V
Sbjct: 274 -------QHGANVSSFIGTLPQGYGENAANPVPVFSASALPVV-HGFGGSSRSEKLAIKV 333

Query: 183 LCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRD-CDECIITISSFESLDDLKSMAV 242
           +C    IGRVIGKGG TIK IRQASG+ +EV+D++ +  D+C+IT+++ ES DDLKSMAV
Sbjct: 334 ICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSMAV 393

Query: 243 ETVLLLQEKINDDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKL- 302
           E VLLLQEKIND++   V M+LL+ SKVIGCIIGKSGSII+EIRK T+ADI ISKG+   
Sbjct: 394 EAVLLLQEKINDEDEDKVKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNNTP 453

Query: 303 KCASSSDELVEVTGKVGCVRDALVQIVLRLRDDALKERDVGHN----SAIVTDSMYTSGS 362
           KCA  +DELVE++G+V  VRDAL+QIVLRLRDD L++R+ G      +    ++ ++S S
Sbjct: 454 KCADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRETGSRNQPPARSENNNFFSSSS 513

Query: 363 S---FSMPSVLPSVSPGAPPMGYDQRAESGSGLSVL-SSSGLYGYGSLSMGDNGYGSMSS 422
           S    ++P    S  P    + +++R E+GS +S+L SS G+YGYGS  +G+  YGS SS
Sbjct: 514 SNTGLALPQSFMSSVPQVASVDFNRRPETGSSMSMLPSSGGIYGYGSFPVGNTSYGSNSS 573

Query: 423 YSSKLYGGLPPPSSLEMLIPANAAGKVIGKEGLILPTLGR 443
           YSS LYGGLP  +++E+ IPANA GKV+G+ G  L  + R
Sbjct: 574 YSSNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDNIRR 601

[Close]

BLAST of IVF0023942 vs. TAIR 10
Match: AT4G18375.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 365.2 bits (936), Expect = 7.7e-101
Identity = 222/453 (49.01%), Postives = 294/453 (64.90%), Query Frame = 0


Query: 3   ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEG 62
           +L+P SQS+++IGKAG  IK++R +TR S+K+  KD +DP H CAME+DN  VISGEPE 
Sbjct: 143 LLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPES 202

Query: 63  VRRALFAISSIMYKFPPREEIPLDTNVSEAP-PNIIIPSDV--PLYSAGGLYPSADPILP 122
           V++ALFA+S+IMYK  PRE IPLD+   + P  ++I+PSD+   +Y   G Y + D IL 
Sbjct: 203 VKQALFAVSAIMYKINPRENIPLDSTSQDVPAASVIVPSDLSNSVYPQTGFYSNQDHILQ 262

Query: 123 P-RSIPPMLGAQHVQDLHDYPD-SGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFD 182
               +P    A  V D   Y + + N  P+++S+LPV   G  G   SEELV +VLCP  
Sbjct: 263 QGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPVT-HGFGGSSRSEELVFKVLCPLC 322

Query: 183 NIGRVIGKGGGTIKSIRQASGARVEVDDTKRDC--DECIITISSFESLDDLKSMAVETVL 242
           NI RVIGKGG TIK IR+ASG+ +EV+D++  C  DEC+I +++ ES DD+KSMAVE VL
Sbjct: 323 NIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVL 382

Query: 243 LLQEKINDDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASS 302
           LLQE IND++   V M+LL+ SKVIGC+IGKSGS+INEIRK T A+I ISKG K      
Sbjct: 383 LLQEYINDEDAENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKGKK------ 442

Query: 303 SDELVEVTGKVGCVRDALVQIVLRLRDDALKERD---VGHNSAIVTDSMYTSGSS---FS 362
            D+LVEV+G+V  VRDAL+QIVLRLR+D L ++D        A   +  + SGSS   ++
Sbjct: 443 -DDLVEVSGEVSSVRDALIQIVLRLREDVLGDKDSVATRKPPARTDNCSFLSGSSNAGYT 502

Query: 363 MPSVLPSVSPGAPPMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYGSMSSYSSKLYG 422
           +PS + S++                     S+SG +GYGS   GDN  GS   YS   YG
Sbjct: 503 LPSFMSSMA---------------------STSGFHGYGSFPAGDNVLGSTGPYS---YG 562

Query: 423 GLPPPSSLEMLIPANAAGKVIGKEGLILPTLGR 443
            LP  S+LE+LIPA+A  KV+GK G  L  + R
Sbjct: 563 RLPSSSALEILIPAHAMSKVMGKGGGNLENIRR 563

[Close]

BLAST of IVF0023942 vs. TAIR 10
Match: AT4G18375.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 338.6 bits (867), Expect = 7.7e-93
Identity = 203/415 (48.92%), Postives = 270/415 (65.06%), Query Frame = 0


Query: 3   ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEG 62
           +L+P SQS+++IGKAG  IK++R +TR S+K+  KD +DP H CAME+DN  VISGEPE 
Sbjct: 143 LLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPES 202

Query: 63  VRRALFAISSIMYKFPPREEIPLDTNVSEAP-PNIIIPSDV--PLYSAGGLYPSADPILP 122
           V++ALFA+S+IMYK  PRE IPLD+   + P  ++I+PSD+   +Y   G Y + D IL 
Sbjct: 203 VKQALFAVSAIMYKINPRENIPLDSTSQDVPAASVIVPSDLSNSVYPQTGFYSNQDHILQ 262

Query: 123 P-RSIPPMLGAQHVQDLHDYPD-SGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFD 182
               +P    A  V D   Y + + N  P+++S+LPV   G  G   SEELV +VLCP  
Sbjct: 263 QGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPVT-HGFGGSSRSEELVFKVLCPLC 322

Query: 183 NIGRVIGKGGGTIKSIRQASGARVEVDDTKRDC--DECIITISSFESLDDLKSMAVETVL 242
           NI RVIGKGG TIK IR+ASG+ +EV+D++  C  DEC+I +++ ES DD+KSMAVE VL
Sbjct: 323 NIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVL 382

Query: 243 LLQEKINDDEGGMVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKLKCASS 302
           LLQE IND++   V M+LL+ SKVIGC+IGKSGS+INEIRK T A+I ISKG K      
Sbjct: 383 LLQEYINDEDAENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKGKK------ 442

Query: 303 SDELVEVTGKVGCVRDALVQIVLRLRDDALKERD---VGHNSAIVTDSMYTSGSS---FS 362
            D+LVEV+G+V  VRDAL+QIVLRLR+D L ++D        A   +  + SGSS   ++
Sbjct: 443 -DDLVEVSGEVSSVRDALIQIVLRLREDVLGDKDSVATRKPPARTDNCSFLSGSSNAGYT 502

Query: 363 MPSVLPSVSPGAPPMGYDQRAESGSGLSVLSSSGLYGYGSLSMGDNGYGSMSSYS 405
           +PS + S++                     S+SG +GYGS   GDN  GS   YS
Sbjct: 503 LPSFMSSMA---------------------STSGFHGYGSFPAGDNVLGSTGPYS 528

[Close]

BLAST of IVF0023942 vs. TAIR 10
Match: AT5G15270.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 165.6 bits (418), Expect = 9.0e-41
Identity = 141/425 (33.18%), Postives = 218/425 (51.29%), Query Frame = 0


Query: 3   ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEG 62
           +L+PS Q   ++G+ G  ++ +RS+T   I+I  KD   P+  CA+  D    ISGE   
Sbjct: 151 LLVPSDQIGCILGRGGQIVQNIRSETGAQIRI-VKDRNMPL--CALNSDELIQISGEVLI 210

Query: 63  VRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIIIPSDVPLYSAGGLYPSADPILPPR- 122
           V++AL  I+S +++ P R +  L ++                Y AG L   A     PR 
Sbjct: 211 VKKALLQIASRLHENPSRSQNLLSSSGG--------------YPAGSLMSHAG---GPRL 270

Query: 123 -SIPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFDNIG 182
             + P++G+ + +D  D+     + PLY              PP+ E  +R++ P +NI 
Sbjct: 271 VGLAPLMGS-YGRDAGDW-----SRPLYQPP--------RNDPPATEFFIRLVSPVENIA 330

Query: 183 RVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEK 242
            VIGKGG  I  +RQ + A ++VD ++ + ++C+ITIS+ E  +D  S  +E V+ LQ K
Sbjct: 331 SVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPK 390

Query: 243 INDD---EGGMV--IMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKL-KCAS 302
            +D    + G+V    RLL+PS  IGCI+GK G+II E+R+ T+A+IRI   + L K AS
Sbjct: 391 CSDKVERDSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVAS 450

Query: 303 SSDELVEVTGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMYT-----SGSSFS 362
             DE+V+++G++   ++AL+QI  RLR +       G  SA++    Y      +G  F 
Sbjct: 451 DDDEMVQISGELDVAKEALIQITSRLRANVFDRE--GAVSALMPVLPYVPVAPDAGDRFD 510

Query: 363 MPS-VLPSVSPGAP-PMGYDQRAESGSGLSVL------SSSGLYG-YGSLSMGDNGYGSM 406
             S     +  G P P GY     S  G S        SSS  YG YG  + G +    +
Sbjct: 511 YDSRDSRRLERGNPYPGGYGSSGVSAEGYSPYGAPVGGSSSTPYGVYGGYASGRSSSSGL 539

[Close]

BLAST of IVF0023942 vs. TAIR 10
Match: AT5G15270.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 165.6 bits (418), Expect = 9.0e-41
Identity = 141/425 (33.18%), Postives = 218/425 (51.29%), Query Frame = 0


Query: 3   ILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMEFDNFAVISGEPEG 62
           +L+PS Q   ++G+ G  ++ +RS+T   I+I  KD   P+  CA+  D    ISGE   
Sbjct: 151 LLVPSDQIGCILGRGGQIVQNIRSETGAQIRI-VKDRNMPL--CALNSDELIQISGEVLI 210

Query: 63  VRRALFAISSIMYKFPPREEIPLDTNVSEAPPNIIIPSDVPLYSAGGLYPSADPILPPR- 122
           V++AL  I+S +++ P R +  L ++                Y AG L   A     PR 
Sbjct: 211 VKKALLQIASRLHENPSRSQNLLSSSGG--------------YPAGSLMSHAG---GPRL 270

Query: 123 -SIPPMLGAQHVQDLHDYPDSGNAWPLYSSALPVVPGGISGHPPSEELVVRVLCPFDNIG 182
             + P++G+ + +D  D+     + PLY              PP+ E  +R++ P +NI 
Sbjct: 271 VGLAPLMGS-YGRDAGDW-----SRPLYQPP--------RNDPPATEFFIRLVSPVENIA 330

Query: 183 RVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESLDDLKSMAVETVLLLQEK 242
            VIGKGG  I  +RQ + A ++VD ++ + ++C+ITIS+ E  +D  S  +E V+ LQ K
Sbjct: 331 SVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPK 390

Query: 243 INDD---EGGMV--IMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKL-KCAS 302
            +D    + G+V    RLL+PS  IGCI+GK G+II E+R+ T+A+IRI   + L K AS
Sbjct: 391 CSDKVERDSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVAS 450

Query: 303 SSDELVEVTGKVGCVRDALVQIVLRLRDDALKERDVGHNSAIVTDSMYT-----SGSSFS 362
             DE+V+++G++   ++AL+QI  RLR +       G  SA++    Y      +G  F 
Sbjct: 451 DDDEMVQISGELDVAKEALIQITSRLRANVFDRE--GAVSALMPVLPYVPVAPDAGDRFD 510

Query: 363 MPS-VLPSVSPGAP-PMGYDQRAESGSGLSVL------SSSGLYG-YGSLSMGDNGYGSM 406
             S     +  G P P GY     S  G S        SSS  YG YG  + G +    +
Sbjct: 511 YDSRDSRRLERGNPYPGGYGSSGVSAEGYSPYGAPVGGSSSTPYGVYGGYASGRSSSSGL 539

The following BLAST results are available for this feature:

BLAST of IVF0023942 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P58223	1.1e-99	49.01	KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18...	[more]
Q8W4B1	6.7e-25	27.84	RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN...	[more]
F4KDN0	9.1e-22	31.13	KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S...	[more]
P57722	1.3e-12	25.08	Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3	[more]
P57721	2.9e-12	25.78	Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2	[more]

BLAST of IVF0023942 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AZT7	4.7e-239	99.77	KH domain-containing protein At4g18375-like OS=Cucumis melo OX=3656 GN=LOC103484...	[more]
A0A5D3CPJ5	4.7e-239	99.77	KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0KIM3	7.8e-234	97.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G523980 PE=4 SV=1	[more]
A0A6J1EJK7	1.2e-218	90.51	KH domain-containing protein At4g18375-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IP47	1.0e-217	90.28	KH domain-containing protein At4g18375-like isoform X2 OS=Cucurbita maxima OX=36...	[more]

BLAST of IVF0023942 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439619.1	4.29e-299	99.77	PREDICTED: KH domain-containing protein At4g18375-like [Cucumis melo] >XP_016899...	[more]
XP_004134572.1	3.02e-292	97.45	KH domain-containing protein At4g18375 [Cucumis sativus] >XP_011658295.1 KH doma...	[more]
XP_038883624.1	2.11e-278	93.53	KH domain-containing protein At4g18375-like [Benincasa hispida]	[more]
XP_022925920.1	1.74e-272	90.51	KH domain-containing protein At4g18375-like [Cucurbita moschata]	[more]
KAG6581437.1	1.74e-272	90.51	KH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of IVF0023942 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46190.1	1.3e-116	51.74	RNA-binding KH domain-containing protein	[more]
AT4G18375.2	7.7e-101	49.01	RNA-binding KH domain-containing protein	[more]
AT4G18375.1	7.7e-93	48.92	RNA-binding KH domain-containing protein	[more]
AT5G15270.2	9.0e-41	33.18	RNA-binding KH domain-containing protein	[more]
AT5G15270.1	9.0e-41	33.18	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 247..321 e-value: 2.0E-11 score: 54.0 coord: 166..239 e-value: 9.9E-9 score: 45.0 coord: 3..75 e-value: 2.4E-7 score: 40.4
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 166..243 e-value: 3.0E-14 score: 54.6
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 1..76 e-value: 3.4E-14 score: 54.4 coord: 246..324 e-value: 5.2E-18 score: 66.6
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 162..219
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 3..80
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 242..332
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 251..316 e-value: 3.8E-13 score: 49.0 coord: 3..71 e-value: 1.7E-11 score: 43.8 coord: 170..219 e-value: 3.6E-12 score: 45.9
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 3..379
None	No IPR available	PANTHER	PTHR10288:SF137	RNA-BINDING KH DOMAIN-CONTAINING PROTEIN	coord: 3..379
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 248..316 score: 15.870812
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 1..70 score: 14.696873
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 167..234 score: 13.56486
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 169..218 e-value: 2.98707E-14 score: 65.1903
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 251..317 e-value: 4.10617E-20 score: 81.7539
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 3..71 e-value: 5.58617E-12 score: 58.6419

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023942.2	IVF0023942.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding