IVF0023905 (gene) Melon (IVF77) v1

Overview


Name	IVF0023905
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	serine/arginine-rich splicing factor SR45a-like
Location	chr12: 1279421 .. 1281481 (+)
RNA-Seq Expression	IVF0023905
Synteny	IVF0023905

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGACTGAACTAACTTTTCCCAAACCATAGGAACCTAACTTGCAAGTTGATCTTTTCTTTATTTACGACAGCTCCTTGCGCTGTTCTGTTCAAGACGATATTCACACTTAATAGTACTCTTAACATTATGGTCTTCAGCGACACTTGTGCTTTTCGTTTGTAAGTCTCTGTAGAATTTAGTGTTTTCTTGTTTGGTTGCAGATGTCATACTCCCGAAGGTCTAGGTACTCCCGCTCCCCATCATTCAAACGATCTGTCTCAAGGTCTCTGTCGAGGTCAAGAAGCCGTTCAAGGTACTTCCTGCTCAGGAACCACTTGCTTGCTTGGTTTCCCACCTTCTCTAAATGATACGATGATGCATATATTCTTATTTTGTGGATTCTTAATTTGTTTTTCAGGAGCCCATCAAGTGATGTTGAAAATCCCGGGAACAATTTGTATGTCACTGGGTTGTCACCTAGAATAACTAGAAGAGAACTCGAGAAGCATTTTTCTGCTGAGGGGACAGTACGTTCCTGATCTCTCATTTTTTGTGCATTCCTTCTTTCTTTTTTTCTTGGTGTGCTATTCTTAGTGGCCATGTATGTGTTTTGTCTTTTGTGTTGGTGATTTAAGTTTGTGGACTTTTCTCAGTTCATGAATGGATGTTTTTAACTTCAGGTTCTAGATGTTCATCTTCTGGCCGATCCATTGACTAGAGAATCTCGTGGATTTGGATTCATTACCATGTCTAGCAATGATGAGGCAGAAAATTGCATCAAATATCTGAATCGATCTGTACTTGAAGGTCGTATAATTACTGTGGAAAAGGTAAAAAGTGAACTAATTATTTTTTCTTAGACTCGGGATGTTTCCTATCATTACTGTTGTCTTGTTCTTTAACCTCATGGTATATCTGGATGATTTGTTGTTAGAGATTTGAGTTTTTTTGCCAAGTGTTTTTTTGGCAGCAGGTTAGCTGTGTGTAGCAGCTCTTCATCAAACTCAAACTACAACTAAACAATCAAAACAAACACATGAGAAGCCTCAGAACATTGGGGTTGTATGCCCTGCATTTCTCTCTATTTCTGCCAATTGCATTATGTGTTGAGTTCTTTAAGTGTTTTAGGTTCTTTTTTCTTTTGTGACTCTCAACACCGTGACTTGCACCCATGCTCTGGTATTTTTCTTAGATGGAAGCTTGAGTAGTTGGTCTCACTTTTTATCTTTAATTGTTGGACAGGCTCGAAGGCGGAGAGGCAGAACTCCAACACCTGGTAGATATCTTGGACTTAGAACAGTTCATGGTGAGATTAAAATCCAACGTTTGGTATATTGCTGTGAAGTATCTTTGTATTTCTGTCTAATCCTCATCATTCTTCTGACAGTGAGGCGTAGGTCGCGAAGCTACTCATCTCGCCGTTCTCCCAGCTACTCTCCATATAGGAGAAGCTCTAGCCGCTCTACTCATTATTCATCTGACCGTAGCAGGAGTAGATCCCGTTCCATCAACCGACATCGTAGATCATATGGTTCCCCTTACCATCGTAGATCATACTCTTATAGCCGGCGAAGATATGATTCTCCATACTATAGGCGACGATATGATTCTCCAGACTACTATAGGCATCATAGGTCATATTCTCGATCCAGCTCACCGTATAGGAGGTGGAGCCGCGACAGGTCATACTCACCTTATGATTACTATTCCCCTGATCCTTACTACAGAAGGCACAGGTACAGGTCAGTTTCTCGGAGCCTTTCACCAAAGTCAAGGAACGGCAGGCATTACTCCCGAAGTTACTCTCCTGAGCCCAGGAGAAGAACGTTGAGAAACTACTCTCATAGCCCCTCCCGGGAATCGAGGAGAAGTTATTCACGTAGTATTTCCCCTGAACGAAGCAGGAGATCAGGAAGTAGTGTCTATTCATCCAGTATTTCTCCTGAACGAGGCAGAAGCTTAAGGAGTCGCTCTTGCAGCCATACCCCAAGACGACACGAGAGCACACGTAAGAGAGGGTATTCTAGTAGGAGTCGATCAAGAAGTCAAAGTGTAACTTCAAGATCTGTTAGTCCGGCTTGA

mRNA sequence

GGACTGAACTAACTTTTCCCAAACCATAGGAACCTAACTTGCAAGTTGATCTTTTCTTTATTTACGACAGCTCCTTGCGCTGTTCTGTTCAAGACGATATTCACACTTAATAGTACTCTTAACATTATGGTCTTCAGCGACACTTGTGCTTTTCGTTTGTAAGTCTCTGTAGAATTTAGTGTTTTCTTGTTTGGTTGCAGATGTCATACTCCCGAAGGTCTAGGTACTCCCGCTCCCCATCATTCAAACGATCTGTCTCAAGGTCTCTGTCGAGGTCAAGAAGCCGTTCAAGGAGCCCATCAAGTGATGTTGAAAATCCCGGGAACAATTTGTATGTCACTGGGTTGTCACCTAGAATAACTAGAAGAGAACTCGAGAAGCATTTTTCTGCTGAGGGGACAGTTCTAGATGTTCATCTTCTGGCCGATCCATTGACTAGAGAATCTCGTGGATTTGGATTCATTACCATGTCTAGCAATGATGAGGCAGAAAATTGCATCAAATATCTGAATCGATCTGTACTTGAAGGTCGTATAATTACTGTGGAAAAGGCTCGAAGGCGGAGAGGCAGAACTCCAACACCTGGTAGATATCTTGGACTTAGAACAGTTCATGTGAGGCGTAGGTCGCGAAGCTACTCATCTCGCCGTTCTCCCAGCTACTCTCCATATAGGAGAAGCTCTAGCCGCTCTACTCATTATTCATCTGACCGTAGCAGGAGTAGATCCCGTTCCATCAACCGACATCGTAGATCATATGGTTCCCCTTACCATCGTAGATCATACTCTTATAGCCGGCGAAGATATGATTCTCCATACTATAGGCGACGATATGATTCTCCAGACTACTATAGGCATCATAGGTCATATTCTCGATCCAGCTCACCGTATAGGAGGTGGAGCCGCGACAGGTCATACTCACCTTATGATTACTATTCCCCTGATCCTTACTACAGAAGGCACAGGTACAGGTCAGTTTCTCGGAGCCTTTCACCAAAGTCAAGGAACGGCAGGCATTACTCCCGAAGTTACTCTCCTGAGCCCAGGAGAAGAACGTTGAGAAACTACTCTCATAGCCCCTCCCGGGAATCGAGGAGAAGTTATTCACGTAGTATTTCCCCTGAACGAAGCAGGAGATCAGGAAGTAGTGTCTATTCATCCAGTATTTCTCCTGAACGAGGCAGAAGCTTAAGGAGTCGCTCTTGCAGCCATACCCCAAGACGACACGAGAGCACACGTAAGAGAGGGTATTCTAGTAGGAGTCGATCAAGAAGTCAAAGTGTAACTTCAAGATCTGTTAGTCCGGCTTGA

Coding sequence (CDS)

ATGTCATACTCCCGAAGGTCTAGGTACTCCCGCTCCCCATCATTCAAACGATCTGTCTCAAGGTCTCTGTCGAGGTCAAGAAGCCGTTCAAGGAGCCCATCAAGTGATGTTGAAAATCCCGGGAACAATTTGTATGTCACTGGGTTGTCACCTAGAATAACTAGAAGAGAACTCGAGAAGCATTTTTCTGCTGAGGGGACAGTTCTAGATGTTCATCTTCTGGCCGATCCATTGACTAGAGAATCTCGTGGATTTGGATTCATTACCATGTCTAGCAATGATGAGGCAGAAAATTGCATCAAATATCTGAATCGATCTGTACTTGAAGGTCGTATAATTACTGTGGAAAAGGCTCGAAGGCGGAGAGGCAGAACTCCAACACCTGGTAGATATCTTGGACTTAGAACAGTTCATGTGAGGCGTAGGTCGCGAAGCTACTCATCTCGCCGTTCTCCCAGCTACTCTCCATATAGGAGAAGCTCTAGCCGCTCTACTCATTATTCATCTGACCGTAGCAGGAGTAGATCCCGTTCCATCAACCGACATCGTAGATCATATGGTTCCCCTTACCATCGTAGATCATACTCTTATAGCCGGCGAAGATATGATTCTCCATACTATAGGCGACGATATGATTCTCCAGACTACTATAGGCATCATAGGTCATATTCTCGATCCAGCTCACCGTATAGGAGGTGGAGCCGCGACAGGTCATACTCACCTTATGATTACTATTCCCCTGATCCTTACTACAGAAGGCACAGGTACAGGTCAGTTTCTCGGAGCCTTTCACCAAAGTCAAGGAACGGCAGGCATTACTCCCGAAGTTACTCTCCTGAGCCCAGGAGAAGAACGTTGAGAAACTACTCTCATAGCCCCTCCCGGGAATCGAGGAGAAGTTATTCACGTAGTATTTCCCCTGAACGAAGCAGGAGATCAGGAAGTAGTGTCTATTCATCCAGTATTTCTCCTGAACGAGGCAGAAGCTTAAGGAGTCGCTCTTGCAGCCATACCCCAAGACGACACGAGAGCACACGTAAGAGAGGGTATTCTAGTAGGAGTCGATCAAGAAGTCAAAGTGTAACTTCAAGATCTGTTAGTCCGGCTTGA

Protein sequence

MSYSRRSRYSRSPSFKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLLADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHVRRRSRSYSSRRSPSYSPYRRSSSRSTHYSSDRSRSRSRSINRHRRSYGSPYHRRSYSYSRRRYDSPYYRRRYDSPDYYRHHRSYSRSSSPYRRWSRDRSYSPYDYYSPDPYYRRHRYRSVSRSLSPKSRNGRHYSRSYSPEPRRRTLRNYSHSPSRESRRSYSRSISPERSRRSGSSVYSSSISPERGRSLRSRSCSHTPRRHESTRKRGYSSRSRSRSQSVTSRSVSPA

Homology

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BLAST of IVF0023905 vs. ExPASy Swiss-Prot
Match: Q84TH4 (Serine/arginine-rich splicing factor SR45a OS=Arabidopsis thaliana OX=3702 GN=SR45A PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.2e-56
Identity = 206/389 (52.96%), Postives = 234/389 (60.15%), Query Frame = 0


Query: 1   MSYSRRSRYSRSPS-FKRSVSRSLSRSRSRS--RSPSSDVENPGNNLYVTGLSPRITRRE 60
           MSYSRRSRYS S S + +   RS+SRS SRS  RS SSD ENPGN+LYVTGLS R+T R+
Sbjct: 31  MSYSRRSRYSPSLSPYDKRRGRSVSRSLSRSPTRSVSSDAENPGNSLYVTGLSHRVTERD 90

Query: 61  LEKHFSAEGTVLDVHLLADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEK 120
           LE HF+ EG V DVHL+ DP TRESRGFGFI+M S  +A  CI+ L+ SVL+GR+ITVEK
Sbjct: 91  LEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSLDHSVLQGRVITVEK 150

Query: 121 ARRRRGRTPTPGRYLGLRTVHVRRRSRSYSSRRSPSYSPYRRSSSRSTHYSSDRSRSRSR 180
           ARRRRGRTPTPG+YLGLRT   R +S SYS RRS S      S SRS  YSSDR RS S 
Sbjct: 151 ARRRRGRTPTPGKYLGLRTARGRHKSPSYSPRRSVSC-----SRSRSRSYSSDRGRSYSP 210

Query: 181 SINRHRRSYG-SPYHRRSYSYS--------------RRRYDSPYYRRRYDSPDYYRHHRS 240
           S  R  RS   SP++RR   YS              R R  SPYYRRR  S  Y R+ R+
Sbjct: 211 SYGRRGRSSSYSPFYRRRRFYSPSRSPSPDDRYNRRRDRSYSPYYRRRDRSRSYSRNCRA 270

Query: 241 YSRSSSPYRRW-SRDRSYSPYDYYSPDPYYRRHRYRSVSRSLSPKSRNGRHYSRSYSPEP 300
             RS    RR+ SR RSYSP             RYR+  RS SP  R GR   RSYSP  
Sbjct: 271 RDRSPYYMRRYRSRSRSYSP-------------RYRARDRSCSPYYR-GR--DRSYSPHY 330

Query: 301 RRRTLRNYS-HSPSRESRRSYSRSISPERSRRSGSSVYSSSISPERGRSLRSRSCSHTPR 360
           + R  R+YS  S      RS S S+SP      G    S SISP +GR   SRS S   R
Sbjct: 331 QGRD-RSYSPESRYYRRHRSVSGSVSP------GGRSMSRSISPRKGRK-ESRSKS---R 382

Query: 361 RHESTRKRGYSSRSRSRS-QSVTSRSVSP 369
           RH+       SS   SRS +S TSRSVSP
Sbjct: 391 RHDR-----QSSMCHSRSARSSTSRSVSP 382

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BLAST of IVF0023905 vs. ExPASy Swiss-Prot
Match: Q10422 (Uncharacterized RNA-binding protein C25G10.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC25G10.01 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 6.8e-15
Identity = 70/210 (33.33%), Postives = 112/210 (53.33%), Query Frame = 0


Query: 20  SRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLLADPLT 79
           + S +  +   +S     EN GN+L+V+G++ R+   EL++ FS  GTV  V ++ +P+T
Sbjct: 79  NESTALDKKEPQSAPEGSENLGNDLFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVT 138

Query: 80  RESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEKARRRRGRTPTPGRYLGLRTVHV 139
           + SRGFGF++ S+ +EA + I  LN     GR++ V+KA+R R  +PTPG+Y+G      
Sbjct: 139 KASRGFGFLSFSTVEEATSAIDNLNSQEFYGRVLNVQKAKRSRPHSPTPGKYMGYDR--- 198

Query: 140 RRRSRSYSSRRSPSYSPYRRSSSRSTHYSSDRSRSRSRSINRHRRSYGSPYHRRSYS--- 199
           RR SR + S        YRR++             R R  NR+R SY     +R +S   
Sbjct: 199 RRNSRDFPSNNKD--GGYRRNN------------YRDRDSNRYRNSYRPSRPQREHSPGN 258

Query: 200 YSRRRYDSPYYRRRYDSPDYYRHHRSYSRS 227
           Y + RY+     RR    + + H RS++ +
Sbjct: 259 YRKERYNVDSRPRR----ERHFHGRSFAHA 267

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BLAST of IVF0023905 vs. ExPASy Swiss-Prot
Match: Q06A98 (Serine/arginine-rich splicing factor 2 OS=Sus scrofa OX=9823 GN=SRSF2 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.5e-11
Identity = 81/212 (38.21%), Postives = 102/212 (48.11%), Query Frame = 0


Query: 33  PSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLLADPLTRESRGFGFITMSS 92
           P  DVE    +L V  L+ R +   L + F   G V DV++  D  T+ESRGF F+    
Sbjct: 6   PPPDVEGM-TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 65

Query: 93  NDEAENCIKYLNRSVLEGRIITVEKARRRR-------GRTPTPGRY----LGLRTVHVRR 152
             +AE+ +  ++ +VL+GR + V+ AR  R        R P P RY     G R+   RR
Sbjct: 66  KRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRRYGGGGYGRRSRSPRR 125

Query: 153 ----RSRSYSSRRSPSYSPYRRSSSRSTHYSSDRSRSRSRSINRHRRSYGSPYHRRSYSY 212
               RSRS S  RS S S Y RS SRS   S  RS S+SRS  R +    S    RS S 
Sbjct: 126 RRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSR 185

Query: 213 SRRRYDSPYYRRRYDSPDYYRHHRSYSRSSSP 230
           SR R  SP        P   R  +S SRS SP
Sbjct: 186 SRSRSRSP-------PPASKRESKSRSRSKSP 209

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BLAST of IVF0023905 vs. ExPASy Swiss-Prot
Match: Q3MHR5 (Serine/arginine-rich splicing factor 2 OS=Bos taurus OX=9913 GN=SRSF2 PE=2 SV=3)

HSP 1 Score: 70.5 bits (171), Expect = 4.6e-11
Identity = 81/212 (38.21%), Postives = 102/212 (48.11%), Query Frame = 0


Query: 33  PSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLLADPLTRESRGFGFITMSS 92
           P  DVE    +L V  L+ R +   L + F   G V DV++  D  T+ESRGF F+    
Sbjct: 6   PPPDVEGM-TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 65

Query: 93  NDEAENCIKYLNRSVLEGRIITVEKARRRR-------GRTPTPGRY----LGLRTVHVRR 152
             +AE+ +  ++ +VL+GR + V+ AR  R        R P P RY     G R+   RR
Sbjct: 66  KRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRRYGGGGYGRRSRSPRR 125

Query: 153 ----RSRSYSSRRSPSYSPYRRSSSRSTHYSSDRSRSRSRSINRHRRSYGSPYHRRSYSY 212
               RSRS S  RS S S Y RS SRS   S  RS S+SRS  R +    S    RS S 
Sbjct: 126 RRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSR 185

Query: 213 SRRRYDSPYYRRRYDSPDYYRHHRSYSRSSSP 230
           SR R  SP        P   R  +S SRS SP
Sbjct: 186 SRSRSRSP-------PPVSKRESKSRSRSKSP 209

[Close]

BLAST of IVF0023905 vs. ExPASy Swiss-Prot
Match: P30352 (Serine/arginine-rich splicing factor 2 OS=Gallus gallus OX=9031 GN=SRSF2 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.6e-11
Identity = 81/212 (38.21%), Postives = 101/212 (47.64%), Query Frame = 0


Query: 33  PSSDVENPGNNLYVTGLSPRITRRELEKHFSAEGTVLDVHLLADPLTRESRGFGFITMSS 92
           P  DVE    +L V  L+ R +   L + F   G V DV++  D  T+ESRGF F+    
Sbjct: 6   PPPDVEGM-TSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 65

Query: 93  NDEAENCIKYLNRSVLEGRIITVEKARRRR-------GRTPTPGRY----LGLRTVHVRR 152
             +AE+ +  ++ +VL+GR + V+ AR  R        R P P RY     G R+   RR
Sbjct: 66  KRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRRYGSSGYGRRSRSPRR 125

Query: 153 ----RSRSYSSRRSPSYSPYRRSSSRSTHYSSDRSRSRSRSINRHRRSYGSPYHRRSYSY 212
               RSRS S  RS S S Y RS SRS   S  RS S+SRS  R +    S    RS S 
Sbjct: 126 RRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSR 185

Query: 213 SRRRYDSPYYRRRYDSPDYYRHHRSYSRSSSP 230
           SR R  SP        P   R   S SRS SP
Sbjct: 186 SRSRSRSP-------PPTSKRESNSRSRSKSP 209

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BLAST of IVF0023905 vs. ExPASy TrEMBL
Match: A0A1S3C508 (serine/arginine-rich splicing factor SR45a-like OS=Cucumis melo OX=3656 GN=LOC103497100 PE=4 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 1.3e-189
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0


Query: 1   MSYSRRSRYSRSPSFKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEK 60
           MSYSRRSRYSRSPSFKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEK
Sbjct: 1   MSYSRRSRYSRSPSFKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEK 60

Query: 61  HFSAEGTVLDVHLLADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEKARR 120
           HFSAEGTVLDVHLLADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEKARR
Sbjct: 61  HFSAEGTVLDVHLLADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEKARR 120

Query: 121 RRGRTPTPGRYLGLRTVHVRRRSRSYSSRRSPSYSPYRRSSSRSTHYSSDRSRSRSRSIN 180
           RRGRTPTPGRYLGLRTVHVRRRSRSYSSRRSPSYSPYRRSSSRSTHYSSDRSRSRSRSIN
Sbjct: 121 RRGRTPTPGRYLGLRTVHVRRRSRSYSSRRSPSYSPYRRSSSRSTHYSSDRSRSRSRSIN 180

Query: 181 RHRRSYGSPYHRRSYSYSRRRYDSPYYRRRYDSPDYYRHHRSYSRSSSPYRRWSRDRSYS 240
           RHRRSYGSPYHRRSYSYSRRRYDSPYYRRRYDSPDYYRHHRSYSRSSSPYRRWSRDRSYS
Sbjct: 181 RHRRSYGSPYHRRSYSYSRRRYDSPYYRRRYDSPDYYRHHRSYSRSSSPYRRWSRDRSYS 240

Query: 241 PYDYYSPDPYYRRHRYRSVSRSLSPKSRNGRHYSRSYSPEPRRRTLRNYSHSPSRESRRS 300
           PYDYYSPDPYYRRHRYRSVSRSLSPKSRNGRHYSRSYSPEPRRRTLRNYSHSPSRESRRS
Sbjct: 241 PYDYYSPDPYYRRHRYRSVSRSLSPKSRNGRHYSRSYSPEPRRRTLRNYSHSPSRESRRS 300

Query: 301 YSRSISPERSRRSGSSVYSSSISPERGRSLRSRSCSHTPRRHESTRKRGYSSRSRSRSQS 360
           YSRSISPERSRRSGSSVYSSSISPERGRSLRSRSCSHTPRRHESTRKRGYSSRSRSRSQS
Sbjct: 301 YSRSISPERSRRSGSSVYSSSISPERGRSLRSRSCSHTPRRHESTRKRGYSSRSRSRSQS 360

Query: 361 VTSRSVSPA 370
           VTSRSVSPA
Sbjct: 361 VTSRSVSPA 369

[Close]

BLAST of IVF0023905 vs. ExPASy TrEMBL
Match: A0A0A0LXJ6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G528490 PE=4 SV=1)

HSP 1 Score: 617.1 bits (1590), Expect = 4.8e-173
Identity = 347/369 (94.04%), Postives = 356/369 (96.48%), Query Frame = 0


Query: 1   MSYSRRSRYSRSPSFKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEK 60
           MSYSRRSRYSRSPSFKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEK
Sbjct: 1   MSYSRRSRYSRSPSFKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEK 60

Query: 61  HFSAEGTVLDVHLLADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEKARR 120
           HFSAEGTVLDVHL+ADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEKARR
Sbjct: 61  HFSAEGTVLDVHLVADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEKARR 120

Query: 121 RRGRTPTPGRYLGLRTVHVRRRSRSYSSRRSPSYSPYRRSSSRSTHYSSDRSRSRSRSIN 180
           RRGRTPTPGRYLGLRTVH RRRSRSYSSRRSPSYSPYRRSSSRSTH SSDRSRSRSRSI+
Sbjct: 121 RRGRTPTPGRYLGLRTVHGRRRSRSYSSRRSPSYSPYRRSSSRSTHCSSDRSRSRSRSID 180

Query: 181 RHRRSYGSPYHRRSYSYSRRRYDSPYYRRRYDSPDYYRHHRSYSRSSSPYRRWSRDRSYS 240
           +HRR+YGSPYHRRSYSYSRRRYDSP YRRRYDSPDYYRHH+SYSRS SPYRRWSRDRSYS
Sbjct: 181 QHRRAYGSPYHRRSYSYSRRRYDSPDYRRRYDSPDYYRHHKSYSRSRSPYRRWSRDRSYS 240

Query: 241 PYDYYSPDPYYRRHRYRSVSRSLSPKSRNGRHYSRSYSPEPRRRTLRNYSHSPSRESRRS 300
           P D+YSPDPYYRRHRYRSVSRSLSPKSRN RHYSRSYSPEPRRRTLRN+  SPS+E   S
Sbjct: 241 PCDHYSPDPYYRRHRYRSVSRSLSPKSRNSRHYSRSYSPEPRRRTLRNHYRSPSQE-LSS 300

Query: 301 YSRSISPERSRRSGSSVYSSSISPERGRSLRSRSCSHTPRRHESTRKRGYSSRSRSRSQS 360
           YSRSISPERS RSGSS+YSSSISPERGRS RSRSCSHTPRRHESTRKRGYSSRSRSRSQS
Sbjct: 301 YSRSISPERS-RSGSSIYSSSISPERGRSSRSRSCSHTPRRHESTRKRGYSSRSRSRSQS 360

Query: 361 VTSRSVSPA 370
           VTSRSVSPA
Sbjct: 361 VTSRSVSPA 367

[Close]

BLAST of IVF0023905 vs. ExPASy TrEMBL
Match: A0A6J1D9V3 (serine/arginine-rich splicing factor SR45a-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018970 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 5.1e-122
Identity = 295/391 (75.45%), Postives = 314/391 (80.31%), Query Frame = 0


Query: 1   MSYSRRSRYSRSPSFKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEK 60
           MSYSR+SRYSRSPS++RS+SRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPR+TRRELEK
Sbjct: 2   MSYSRKSRYSRSPSYERSLSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRMTRRELEK 61

Query: 61  HFSAEGTVLDVHLLADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEKARR 120
           HFSAEGTVLDVHL+ADP TRESRGFGFITMSSN+EAE CIKYLNRSVLEGRIITVEKARR
Sbjct: 62  HFSAEGTVLDVHLVADPWTRESRGFGFITMSSNEEAERCIKYLNRSVLEGRIITVEKARR 121

Query: 121 RRGRTPTPGRYLGLRTVHVRRRSRSYSSRRSPSYSPYRRSSSRSTHYSSDRSRSRSRSIN 180
           RRGRTPTPGRYLGLRTV VRRRS SYS R SPSYSPYRRSSSRS+ YSS+RSRSRS S  
Sbjct: 122 RRGRTPTPGRYLGLRTVRVRRRSHSYSPRHSPSYSPYRRSSSRSSRYSSERSRSRSHSPY 181

Query: 181 RHRRSYGSPYHRRSYSYSRRRYDSPYYRRRYDSPDYYRHHRSYSRSS--SPYRR---WSR 240
           RHRRSYGSPYH RSY        SPY RRRYDSP YYR HRSYSRS   SPY R      
Sbjct: 182 RHRRSYGSPYHHRSY--------SPYSRRRYDSP-YYRCHRSYSRSGSRSPYCRSPTRRH 241

Query: 241 DRSYSP-YDYYSPDP-YYRRHRYRSVSRSLSPKSR-NGRHYSRSYSPEPRRRTLRNYSHS 300
           DRSYS  YDYYS D  YYRRHRYRSVSRS+SPK+R +GR YSRSYSP P RRTLR+YS S
Sbjct: 242 DRSYSSYYDYYSRDDCYYRRHRYRSVSRSVSPKARISGRGYSRSYSPRP-RRTLRSYSRS 301

Query: 301 PSRE---------SRRSYSRSISPERSRRSGSSVYSSSISPERGRSLRSRSCSHTPRRH- 360
           PS             RSYSRS+SPERS+RSGS +   S    R RS RSRS SHT RRH 
Sbjct: 302 PSSVRIYSRSPSLELRSYSRSVSPERSKRSGSYLEGRS---SRSRS-RSRSRSHTFRRHS 361

Query: 361 ----ESTRKRGYSSRSRSRSQSVTSRSVSPA 370
               E++ KR YS  SRSRS+SV SRSVSPA
Sbjct: 362 HKVYENSGKREYSGXSRSRSRSVVSRSVSPA 378

[Close]

BLAST of IVF0023905 vs. ExPASy TrEMBL
Match: A0A6J1HP51 (serine/arginine-rich splicing factor SR45a-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464732 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 1.8e-119
Identity = 288/410 (70.24%), Postives = 308/410 (75.12%), Query Frame = 0


Query: 1   MSYSRRSRYSRSPSFKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEK 60
           MSYSRRSRYSRSPS+KRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPR+T+RELEK
Sbjct: 1   MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRVTKRELEK 60

Query: 61  HFSAEGTVLDVHLLADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEKARR 120
           HFSAEGTVLDVHL+ADP TRESRGFGFITMSSNDEAE CIKYLNRSVLEGRIITVEKARR
Sbjct: 61  HFSAEGTVLDVHLVADPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRIITVEKARR 120

Query: 121 RRGRTPTPGRYLGL-RTVHVRRR-SRSYSSRRSPSYSPYRRSSSRSTHYSSDRSRSRSRS 180
           RRGRTPTPG+YLGL RTV  R R S SYSSRRSPSYSPY +SSS S+HYSSDRSRSRS S
Sbjct: 121 RRGRTPTPGKYLGLVRTVSERHRSSHSYSSRRSPSYSPY-KSSSCSSHYSSDRSRSRSHS 180

Query: 181 INRHRRSYGSPYHRRSYSYSRRRYDSPYYRRRYDSPDYYRHHRSYSRSSSPYR--RWSRD 240
           ++RH+RS+                 SPY RRRYDSPD YRHHRSYSRS SPYR     RD
Sbjct: 181 VDRHQRSF-----------------SPYSRRRYDSPD-YRHHRSYSRSRSPYRLPTRRRD 240

Query: 241 RSYSPYDYYSPDPYYRRHRY--RSVSRSLSPKSRNGRHYSRSYSP--------------- 300
           RSYSPYD YSP+PYYRRHR+  RS SRS +P     R   RSYSP               
Sbjct: 241 RSYSPYDCYSPEPYYRRHRHWSRSYSRSRTPYRTPTRRRDRSYSPYDCYSPEPYYRRHRH 300

Query: 301 -------------------EPRRRTLRNYSHSPSRESRRSYSRSISPERSRRSGSSVYSS 360
                               PRRRT+R+YS SPS+ESR +YS SIS ERS RSGS  YS 
Sbjct: 301 RSPEPYYRGHKYRSVSRSLSPRRRTIRSYSRSPSQESRNTYSHSISSERSSRSGS--YSR 360

Query: 361 SISPERGRSLRSRSCSHTPRRH-ESTRKRGYSSRSRSRSQSVTSRSVSPA 370
           S+SPE  R  RSRSCSHTPRRH ES RKRG S  SRSRSQSV SR+VSPA
Sbjct: 361 SVSPE-SRGSRSRSCSHTPRRHYESPRKRGDSGGSRSRSQSVVSRTVSPA 388

[Close]

BLAST of IVF0023905 vs. ExPASy TrEMBL
Match: A0A6J1GBJ2 (serine/arginine-rich splicing factor SR45a-like isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111452466 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 9.9e-118
Identity = 284/374 (75.94%), Postives = 298/374 (79.68%), Query Frame = 0


Query: 1   MSYSRRSRYSRSPSFKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEK 60
           MSYSRRSRYSRSPS+KRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLS RITRRELEK
Sbjct: 1   MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK 60

Query: 61  HFSAEGTVLDVHLLADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEKARR 120
           HFSAEGTVLDVHL+ DP TRESRGFGFITMSSNDEAE CIKYLNRSVLEGR+ITVEKARR
Sbjct: 61  HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR 120

Query: 121 RRGRTPTPGRYLGLRTVHVRRRSRSYSSRRSPSYSPYRRSSSRSTHYSSDRSRSRSRSIN 180
           RRGRTPTPGRY GLRTV VRRR RSYSSRRSPSYSPY RS S S++YSSDRSRSRS S N
Sbjct: 121 RRGRTPTPGRYFGLRTVCVRRRLRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN 180

Query: 181 RHRRSYGSPYHRRSYS-YSRRRYDSPYYRRRYDSPDYYRHHRSYSRSSSPYRR---WSRD 240
           R RRS  SPY  RSYS YSRRRYDSPYYRR          HRSYSRS SP  R     RD
Sbjct: 181 RRRRSNDSPYRYRSYSPYSRRRYDSPYYRR----------HRSYSRSHSPCSRSPTRRRD 240

Query: 241 RSYSPYDYYSPDPYYRRHRYRSVSRSLSPKSR-NGRHYSRSYSPEPRRRTLRNYSHSPSR 300
           RSYSPYDY SPD YYRRHR RSVSRS+SPK+R + R YS SYSP  RR   R++S S   
Sbjct: 241 RSYSPYDYCSPDLYYRRHRDRSVSRSVSPKARVSSRRYSCSYSPRHRRSASRSHSRS--- 300

Query: 301 ESRRSYSRSISPERSRRSGSSVYSSSISPERGRSLRSRSCSHTPRRHESTRKRGYSSRSR 360
              RSYSRS+SPERSRR  S  +S SISPER RS RSRS SHTPR H   ++ GYS    
Sbjct: 301 ---RSYSRSLSPERSRRFRS--HSHSISPER-RSSRSRSRSHTPRHH---KRGGYS---- 348

Query: 361 SRSQSVTSRSVSPA 370
             S SV SRSVSPA
Sbjct: 361 GGSGSVASRSVSPA 348

[Close]

BLAST of IVF0023905 vs. NCBI nr
Match: XP_008457405.1 (PREDICTED: serine/arginine-rich splicing factor SR45a-like [Cucumis melo])

HSP 1 Score: 674 bits (1739), Expect = 2.50e-243
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0


Query: 1   MSYSRRSRYSRSPSFKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEK 60
           MSYSRRSRYSRSPSFKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEK
Sbjct: 1   MSYSRRSRYSRSPSFKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEK 60

Query: 61  HFSAEGTVLDVHLLADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEKARR 120
           HFSAEGTVLDVHLLADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEKARR
Sbjct: 61  HFSAEGTVLDVHLLADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEKARR 120

Query: 121 RRGRTPTPGRYLGLRTVHVRRRSRSYSSRRSPSYSPYRRSSSRSTHYSSDRSRSRSRSIN 180
           RRGRTPTPGRYLGLRTVHVRRRSRSYSSRRSPSYSPYRRSSSRSTHYSSDRSRSRSRSIN
Sbjct: 121 RRGRTPTPGRYLGLRTVHVRRRSRSYSSRRSPSYSPYRRSSSRSTHYSSDRSRSRSRSIN 180

Query: 181 RHRRSYGSPYHRRSYSYSRRRYDSPYYRRRYDSPDYYRHHRSYSRSSSPYRRWSRDRSYS 240
           RHRRSYGSPYHRRSYSYSRRRYDSPYYRRRYDSPDYYRHHRSYSRSSSPYRRWSRDRSYS
Sbjct: 181 RHRRSYGSPYHRRSYSYSRRRYDSPYYRRRYDSPDYYRHHRSYSRSSSPYRRWSRDRSYS 240

Query: 241 PYDYYSPDPYYRRHRYRSVSRSLSPKSRNGRHYSRSYSPEPRRRTLRNYSHSPSRESRRS 300
           PYDYYSPDPYYRRHRYRSVSRSLSPKSRNGRHYSRSYSPEPRRRTLRNYSHSPSRESRRS
Sbjct: 241 PYDYYSPDPYYRRHRYRSVSRSLSPKSRNGRHYSRSYSPEPRRRTLRNYSHSPSRESRRS 300

Query: 301 YSRSISPERSRRSGSSVYSSSISPERGRSLRSRSCSHTPRRHESTRKRGYSSRSRSRSQS 360
           YSRSISPERSRRSGSSVYSSSISPERGRSLRSRSCSHTPRRHESTRKRGYSSRSRSRSQS
Sbjct: 301 YSRSISPERSRRSGSSVYSSSISPERGRSLRSRSCSHTPRRHESTRKRGYSSRSRSRSQS 360

Query: 361 VTSRSVSPA 369
           VTSRSVSPA
Sbjct: 361 VTSRSVSPA 369

[Close]

BLAST of IVF0023905 vs. NCBI nr
Match: XP_004145262.1 (serine/arginine-rich splicing factor SR45a [Cucumis sativus] >KGN65784.1 hypothetical protein Csa_023227 [Cucumis sativus])

HSP 1 Score: 619 bits (1596), Expect = 1.42e-221
Identity = 347/369 (94.04%), Postives = 356/369 (96.48%), Query Frame = 0


Query: 1   MSYSRRSRYSRSPSFKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEK 60
           MSYSRRSRYSRSPSFKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEK
Sbjct: 1   MSYSRRSRYSRSPSFKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEK 60

Query: 61  HFSAEGTVLDVHLLADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEKARR 120
           HFSAEGTVLDVHL+ADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEKARR
Sbjct: 61  HFSAEGTVLDVHLVADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEKARR 120

Query: 121 RRGRTPTPGRYLGLRTVHVRRRSRSYSSRRSPSYSPYRRSSSRSTHYSSDRSRSRSRSIN 180
           RRGRTPTPGRYLGLRTVH RRRSRSYSSRRSPSYSPYRRSSSRSTH SSDRSRSRSRSI+
Sbjct: 121 RRGRTPTPGRYLGLRTVHGRRRSRSYSSRRSPSYSPYRRSSSRSTHCSSDRSRSRSRSID 180

Query: 181 RHRRSYGSPYHRRSYSYSRRRYDSPYYRRRYDSPDYYRHHRSYSRSSSPYRRWSRDRSYS 240
           +HRR+YGSPYHRRSYSYSRRRYDSP YRRRYDSPDYYRHH+SYSRS SPYRRWSRDRSYS
Sbjct: 181 QHRRAYGSPYHRRSYSYSRRRYDSPDYRRRYDSPDYYRHHKSYSRSRSPYRRWSRDRSYS 240

Query: 241 PYDYYSPDPYYRRHRYRSVSRSLSPKSRNGRHYSRSYSPEPRRRTLRNYSHSPSRESRRS 300
           P D+YSPDPYYRRHRYRSVSRSLSPKSRN RHYSRSYSPEPRRRTLRN+  SPS+E   S
Sbjct: 241 PCDHYSPDPYYRRHRYRSVSRSLSPKSRNSRHYSRSYSPEPRRRTLRNHYRSPSQELS-S 300

Query: 301 YSRSISPERSRRSGSSVYSSSISPERGRSLRSRSCSHTPRRHESTRKRGYSSRSRSRSQS 360
           YSRSISPERSR SGSS+YSSSISPERGRS RSRSCSHTPRRHESTRKRGYSSRSRSRSQS
Sbjct: 301 YSRSISPERSR-SGSSIYSSSISPERGRSSRSRSCSHTPRRHESTRKRGYSSRSRSRSQS 360

Query: 361 VTSRSVSPA 369
           VTSRSVSPA
Sbjct: 361 VTSRSVSPA 367

[Close]

BLAST of IVF0023905 vs. NCBI nr
Match: XP_038894517.1 (serine/arginine-rich splicing factor SR45a isoform X1 [Benincasa hispida])

HSP 1 Score: 515 bits (1327), Expect = 9.41e-181
Identity = 315/376 (83.78%), Postives = 329/376 (87.50%), Query Frame = 0


Query: 1   MSYSRRSRYSRSPSFKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEK 60
           MS SRRSRYSRSPS+KRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEK
Sbjct: 1   MSCSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEK 60

Query: 61  HFSAEGTVLDVHLLADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEKARR 120
           HFSAEGTVLDVHL+ DPLTRESRGFGFITMSSNDEA+NCIKYLNRSVLEGRIITVEKARR
Sbjct: 61  HFSAEGTVLDVHLVTDPLTRESRGFGFITMSSNDEADNCIKYLNRSVLEGRIITVEKARR 120

Query: 121 RRGRTPTPGRYLGLRTVHVRRRSRSYSSRRSPSYSPYRRSSSRSTHYSSDRSRSRSRSIN 180
           RRGRTPTPGRYLGLRTVHVRRRSRSYSSRRSPSYSPYRRSSSRST YSS+RSRSRS S++
Sbjct: 121 RRGRTPTPGRYLGLRTVHVRRRSRSYSSRRSPSYSPYRRSSSRSTDYSSNRSRSRSHSVD 180

Query: 181 RHRRSYGSPYHRRSYSYSRRRYDSPYYRRRYDSPDYYRHHRSYSRSSSPYRRWSRDRSYS 240
           RHRRSYGS Y+ RSYSYSRRRYDSP  RR          H+SYSRS SPYRR  RDRSYS
Sbjct: 181 RHRRSYGSSYNYRSYSYSRRRYDSPDCRR----------HKSYSRSRSPYRRRHRDRSYS 240

Query: 241 PYDYYSPDPYYRRHRYRSVSRSLSPKSR-NGRHYSRSYSPEPRRRTLR-NYSHSPSRESR 300
           PYD YSPDPYYRRHRYRSVSRSLSPK+R + RHYSRSYSPEPRRRTLR +YS S S ESR
Sbjct: 241 PYDDYSPDPYYRRHRYRSVSRSLSPKARISSRHYSRSYSPEPRRRTLRRSYSRSLSWESR 300

Query: 301 RSYSRSISPERSRRSGSSVYSSSISPERGRSLRSRSCSHTPRRH-----ESTRKRGYSSR 360
           RSYSRSISPERSRRS SS YS S+SPER RS RSRS S+T RRH     ES R      R
Sbjct: 301 RSYSRSISPERSRRSWSS-YSYSVSPERSRSSRSRSRSNTSRRHSYKLYESRR------R 359

Query: 361 SRSRSQSVTSRSVSPA 369
           SRSRS+SVTSRSVSPA
Sbjct: 361 SRSRSRSVTSRSVSPA 359

[Close]

BLAST of IVF0023905 vs. NCBI nr
Match: XP_022150940.1 (serine/arginine-rich splicing factor SR45a-like isoform X1 [Momordica charantia])

HSP 1 Score: 449 bits (1155), Expect = 2.59e-154
Identity = 297/391 (75.96%), Postives = 316/391 (80.82%), Query Frame = 0


Query: 1   MSYSRRSRYSRSPSFKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEK 60
           MSYSR+SRYSRSPS++RS+SRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPR+TRRELEK
Sbjct: 2   MSYSRKSRYSRSPSYERSLSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRMTRRELEK 61

Query: 61  HFSAEGTVLDVHLLADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEKARR 120
           HFSAEGTVLDVHL+ADP TRESRGFGFITMSSN+EAE CIKYLNRSVLEGRIITVEKARR
Sbjct: 62  HFSAEGTVLDVHLVADPWTRESRGFGFITMSSNEEAERCIKYLNRSVLEGRIITVEKARR 121

Query: 121 RRGRTPTPGRYLGLRTVHVRRRSRSYSSRRSPSYSPYRRSSSRSTHYSSDRSRSRSRSIN 180
           RRGRTPTPGRYLGLRTV VRRRS SYS R SPSYSPYRRSSSRS+ YSS+RSRSRS S  
Sbjct: 122 RRGRTPTPGRYLGLRTVRVRRRSHSYSPRHSPSYSPYRRSSSRSSRYSSERSRSRSHSPY 181

Query: 181 RHRRSYGSPYHRRSYSYSRRRYDSPYYRRRYDSPDYYRHHRSYSRSSS--PYRRWS---R 240
           RHRRSYGSPYH RSYS        PY RRRYDSP YYR HRSYSRS S  PY R      
Sbjct: 182 RHRRSYGSPYHHRSYS--------PYSRRRYDSP-YYRCHRSYSRSGSRSPYCRSPTRRH 241

Query: 241 DRSYSPY-DYYSPDP-YYRRHRYRSVSRSLSPKSR-NGRHYSRSYSPEPRRRTLRNYSHS 300
           DRSYS Y DYYS D  YYRRHRYRSVSRS+SPK+R +GR YSRSYSP PRR TLR+YS S
Sbjct: 242 DRSYSSYYDYYSRDDCYYRRHRYRSVSRSVSPKARISGRGYSRSYSPRPRR-TLRSYSRS 301

Query: 301 PSRE---SR------RSYSRSISPERSRRSGSSVYSSSISPERGRSLRSRSCSHTPRRH- 360
           PS     SR      RSYSRS+SPERS+RSGS +   S    R RS RSRS SHT RRH 
Sbjct: 302 PSSVRIYSRSPSLELRSYSRSVSPERSKRSGSYLEGRS---SRSRS-RSRSRSHTFRRHS 361

Query: 361 ----ESTRKRGYSSRSRSRSQSVTSRSVSPA 369
               E++ KR YS  SRSRS+SV SRSVSPA
Sbjct: 362 HKVYENSGKREYSGXSRSRSRSVVSRSVSPA 378

[Close]

BLAST of IVF0023905 vs. NCBI nr
Match: KAG6607292.1 (Serine/arginine-rich splicing factor SR45a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 445 bits (1145), Expect = 9.15e-153
Identity = 287/374 (76.74%), Postives = 300/374 (80.21%), Query Frame = 0


Query: 1   MSYSRRSRYSRSPSFKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEK 60
           MSYSRRSRYSRSPS+KRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLS RITRRELEK
Sbjct: 33  MSYSRRSRYSRSPSYKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSHRITRRELEK 92

Query: 61  HFSAEGTVLDVHLLADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEKARR 120
           HFSAEGTVLDVHL+ DP TRESRGFGFITMSSNDEAE CIKYLNRSVLEGR+ITVEKARR
Sbjct: 93  HFSAEGTVLDVHLVTDPWTRESRGFGFITMSSNDEAERCIKYLNRSVLEGRLITVEKARR 152

Query: 121 RRGRTPTPGRYLGLRTVHVRRRSRSYSSRRSPSYSPYRRSSSRSTHYSSDRSRSRSRSIN 180
           RRGRTPTPGRY GLRTV VRRRSRSYSSRRSPSYSPY RS S S++YSSDRSRSRS S N
Sbjct: 153 RRGRTPTPGRYFGLRTVRVRRRSRSYSSRRSPSYSPYSRSLSCSSNYSSDRSRSRSHSPN 212

Query: 181 RHRRSYGSPYHRRSYS-YSRRRYDSPYYRRRYDSPDYYRHHRSYSRSSSPYRRWS---RD 240
           R RRS  SPYH RSYS YS RRYDSPYYRR          HRSYSRS SP  R      D
Sbjct: 213 RRRRSNDSPYHYRSYSPYSGRRYDSPYYRR----------HRSYSRSHSPCSRLPTRRHD 272

Query: 241 RSYSPYDYYSPDPYYRRHRYRSVSRSLSPKSR-NGRHYSRSYSPEPRRRTLRNYSHSPSR 300
           RSYSPYDY SPDPYYRRHR RSVSRS+SPK+R + R YSRSYSP  RR   R+YS S   
Sbjct: 273 RSYSPYDYCSPDPYYRRHRDRSVSRSVSPKARVSSRRYSRSYSPRHRRSASRSYSRS--- 332

Query: 301 ESRRSYSRSISPERSRRSGSSVYSSSISPERGRSLRSRSCSHTPRRHESTRKRGYSSRSR 360
              RSYSRS+SPERSRR  S  +S SISPER RS RSRS SHTPR H+   + GYS  S 
Sbjct: 333 ---RSYSRSLSPERSRRFRS--HSHSISPER-RSSRSRSRSHTPRHHK---RGGYSGGSG 380

Query: 361 SRSQSVTSRSVSPA 369
           S    V SRSVSPA
Sbjct: 393 S----VASRSVSPA 380

[Close]

BLAST of IVF0023905 vs. TAIR 10
Match: AT1G07350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 221.9 bits (564), Expect = 8.7e-58
Identity = 206/389 (52.96%), Postives = 234/389 (60.15%), Query Frame = 0


Query: 1   MSYSRRSRYSRSPS-FKRSVSRSLSRSRSRS--RSPSSDVENPGNNLYVTGLSPRITRRE 60
           MSYSRRSRYS S S + +   RS+SRS SRS  RS SSD ENPGN+LYVTGLS R+T R+
Sbjct: 31  MSYSRRSRYSPSLSPYDKRRGRSVSRSLSRSPTRSVSSDAENPGNSLYVTGLSHRVTERD 90

Query: 61  LEKHFSAEGTVLDVHLLADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEK 120
           LE HF+ EG V DVHL+ DP TRESRGFGFI+M S  +A  CI+ L+ SVL+GR+ITVEK
Sbjct: 91  LEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSLDHSVLQGRVITVEK 150

Query: 121 ARRRRGRTPTPGRYLGLRTVHVRRRSRSYSSRRSPSYSPYRRSSSRSTHYSSDRSRSRSR 180
           ARRRRGRTPTPG+YLGLRT   R +S SYS RRS S      S SRS  YSSDR RS S 
Sbjct: 151 ARRRRGRTPTPGKYLGLRTARGRHKSPSYSPRRSVSC-----SRSRSRSYSSDRGRSYSP 210

Query: 181 SINRHRRSYG-SPYHRRSYSYS--------------RRRYDSPYYRRRYDSPDYYRHHRS 240
           S  R  RS   SP++RR   YS              R R  SPYYRRR  S  Y R+ R+
Sbjct: 211 SYGRRGRSSSYSPFYRRRRFYSPSRSPSPDDRYNRRRDRSYSPYYRRRDRSRSYSRNCRA 270

Query: 241 YSRSSSPYRRW-SRDRSYSPYDYYSPDPYYRRHRYRSVSRSLSPKSRNGRHYSRSYSPEP 300
             RS    RR+ SR RSYSP             RYR+  RS SP  R GR   RSYSP  
Sbjct: 271 RDRSPYYMRRYRSRSRSYSP-------------RYRARDRSCSPYYR-GR--DRSYSPHY 330

Query: 301 RRRTLRNYS-HSPSRESRRSYSRSISPERSRRSGSSVYSSSISPERGRSLRSRSCSHTPR 360
           + R  R+YS  S      RS S S+SP      G    S SISP +GR   SRS S   R
Sbjct: 331 QGRD-RSYSPESRYYRRHRSVSGSVSP------GGRSMSRSISPRKGRK-ESRSKS---R 382

Query: 361 RHESTRKRGYSSRSRSRS-QSVTSRSVSP 369
           RH+       SS   SRS +S TSRSVSP
Sbjct: 391 RHDR-----QSSMCHSRSARSSTSRSVSP 382

[Close]

BLAST of IVF0023905 vs. TAIR 10
Match: AT4G35785.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 148.7 bits (374), Expect = 9.4e-36
Identity = 109/204 (53.43%), Postives = 127/204 (62.25%), Query Frame = 0


Query: 2   SYSRRSRYSRSPSFKRSVSRSLSRSRSRSRSPSSDVENPGNNLYVTGLSPRITRRELEKH 61
           S SR    SRS S  R VS S SR RSRSRS  S+VENPG  LYVTGLS R+T ++LE H
Sbjct: 31  SRSRPRLRSRSRSLPRPVSPSRSRGRSRSRSRGSEVENPGTTLYVTGLSTRVTDKDLEAH 90

Query: 62  FSAEGTVLDVHLLADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEKARRR 121
           F+ EG V    L+ +P TR SRGF F+TMSS  +AE CIKYLN+SVLEGR ITVE++RR+
Sbjct: 91  FAKEGKVASCFLVMEPRTRVSRGFAFVTMSSLKDAERCIKYLNQSVLEGRYITVERSRRK 150

Query: 122 RGRTPTPGRYLGLRTVHVRRRSRSYSSRRSPSYSPYR-RSSSRSTHYSSDRSRS-RSRSI 181
           R RTPTPG YLGL++     R    S  R      YR R S R  +   D  RS R RS 
Sbjct: 151 RPRTPTPGHYLGLKSSRDSDREGRSSRGRHYDRDDYRDRRSPRRDYSPRDERRSRRDRSY 210

Query: 182 NRHRRSYGSPYHRRSYSYSRRRYD 204
           + H RS      RRS   S RRY+
Sbjct: 211 SPHGRSPERRSERRS-ERSERRYE 233

[Close]

BLAST of IVF0023905 vs. TAIR 10
Match: AT4G35785.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 144.1 bits (362), Expect = 2.3e-34
Identity = 109/205 (53.17%), Postives = 127/205 (61.95%), Query Frame = 0


Query: 2   SYSRRSRYSRSPSFKRSVSRSLSRSRSRSRSPS-SDVENPGNNLYVTGLSPRITRRELEK 61
           S SR    SRS S  R VS S SR RSRSRS   S+VENPG  LYVTGLS R+T ++LE 
Sbjct: 31  SRSRPRLRSRSRSLPRPVSPSRSRGRSRSRSRGRSEVENPGTTLYVTGLSTRVTDKDLEA 90

Query: 62  HFSAEGTVLDVHLLADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEKARR 121
           HF+ EG V    L+ +P TR SRGF F+TMSS  +AE CIKYLN+SVLEGR ITVE++RR
Sbjct: 91  HFAKEGKVASCFLVMEPRTRVSRGFAFVTMSSLKDAERCIKYLNQSVLEGRYITVERSRR 150

Query: 122 RRGRTPTPGRYLGLRTVHVRRRSRSYSSRRSPSYSPYR-RSSSRSTHYSSDRSRS-RSRS 181
           +R RTPTPG YLGL++     R    S  R      YR R S R  +   D  RS R RS
Sbjct: 151 KRPRTPTPGHYLGLKSSRDSDREGRSSRGRHYDRDDYRDRRSPRRDYSPRDERRSRRDRS 210

Query: 182 INRHRRSYGSPYHRRSYSYSRRRYD 204
            + H RS      RRS   S RRY+
Sbjct: 211 YSPHGRSPERRSERRS-ERSERRYE 234

[Close]

BLAST of IVF0023905 vs. TAIR 10
Match: AT1G07350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 139.0 bits (349), Expect = 7.4e-33
Identity = 79/120 (65.83%), Postives = 93/120 (77.50%), Query Frame = 0


Query: 1   MSYSRRSRYSRSPS-FKRSVSRSLSRSRSRS--RSPSSDVENPGNNLYVTGLSPRITRRE 60
           MSYSRRSRYS S S + +   RS+SRS SRS  RS SSD ENPGN+LYVTGLS R+T R+
Sbjct: 1   MSYSRRSRYSPSLSPYDKRRGRSVSRSLSRSPTRSVSSDAENPGNSLYVTGLSHRVTERD 60

Query: 61  LEKHFSAEGTVLDVHLLADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEK 118
           LE HF+ EG V DVHL+ DP TRESRGFGFI+M S  +A  CI+ L+ SVL+GR+ITVEK
Sbjct: 61  LEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSLDHSVLQGRVITVEK 120

[Close]

BLAST of IVF0023905 vs. TAIR 10
Match: AT4G35785.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 122.1 bits (305), Expect = 9.4e-28
Identity = 72/117 (61.54%), Postives = 83/117 (70.94%), Query Frame = 0


Query: 2   SYSRRSRYSRSPSFKRSVSRSLSRSRSRSRSPS-SDVENPGNNLYVTGLSPRITRRELEK 61
           S SR    SRS S  R VS S SR RSRSRS   S+VENPG  LYVTGLS R+T ++LE 
Sbjct: 31  SRSRPRLRSRSRSLPRPVSPSRSRGRSRSRSRGRSEVENPGTTLYVTGLSTRVTDKDLEA 90

Query: 62  HFSAEGTVLDVHLLADPLTRESRGFGFITMSSNDEAENCIKYLNRSVLEGRIITVEK 118
           HF+ EG V    L+ +P TR SRGF F+TMSS  +AE CIKYLN+SVLEGR ITVE+
Sbjct: 91  HFAKEGKVASCFLVMEPRTRVSRGFAFVTMSSLKDAERCIKYLNQSVLEGRYITVER 147

The following BLAST results are available for this feature:

BLAST of IVF0023905 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84TH4	1.2e-56	52.96	Serine/arginine-rich splicing factor SR45a OS=Arabidopsis thaliana OX=3702 GN=SR...	[more]
Q10422	6.8e-15	33.33	Uncharacterized RNA-binding protein C25G10.01 OS=Schizosaccharomyces pombe (stra...	[more]
Q06A98	3.5e-11	38.21	Serine/arginine-rich splicing factor 2 OS=Sus scrofa OX=9823 GN=SRSF2 PE=2 SV=1	[more]
Q3MHR5	4.6e-11	38.21	Serine/arginine-rich splicing factor 2 OS=Bos taurus OX=9913 GN=SRSF2 PE=2 SV=3	[more]
P30352	4.6e-11	38.21	Serine/arginine-rich splicing factor 2 OS=Gallus gallus OX=9031 GN=SRSF2 PE=2 SV...	[more]

BLAST of IVF0023905 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C508	1.3e-189	100.00	serine/arginine-rich splicing factor SR45a-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LXJ6	4.8e-173	94.04	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G528490 PE=4 SV...	[more]
A0A6J1D9V3	5.1e-122	75.45	serine/arginine-rich splicing factor SR45a-like isoform X1 OS=Momordica charanti...	[more]
A0A6J1HP51	1.8e-119	70.24	serine/arginine-rich splicing factor SR45a-like isoform X2 OS=Cucurbita moschata...	[more]
A0A6J1GBJ2	9.9e-118	75.94	serine/arginine-rich splicing factor SR45a-like isoform X5 OS=Cucurbita moschata...	[more]

BLAST of IVF0023905 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457405.1	2.50e-243	100.00	PREDICTED: serine/arginine-rich splicing factor SR45a-like [Cucumis melo]	[more]
XP_004145262.1	1.42e-221	94.04	serine/arginine-rich splicing factor SR45a [Cucumis sativus] >KGN65784.1 hypothe...	[more]
XP_038894517.1	9.41e-181	83.78	serine/arginine-rich splicing factor SR45a isoform X1 [Benincasa hispida]	[more]
XP_022150940.1	2.59e-154	75.96	serine/arginine-rich splicing factor SR45a-like isoform X1 [Momordica charantia]	[more]
KAG6607292.1	9.15e-153	76.74	Serine/arginine-rich splicing factor SR45a, partial [Cucurbita argyrosperma subs...	[more]

BLAST of IVF0023905 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07350.1	8.7e-58	52.96	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G35785.1	9.4e-36	53.43	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G35785.2	2.3e-34	53.17	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G07350.2	7.4e-33	65.83	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G35785.3	9.4e-28	61.54	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 43..116 e-value: 3.6E-22 score: 89.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 44..113 e-value: 2.8E-14 score: 52.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 42..120 score: 17.06296
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..126 e-value: 3.1E-26 score: 94.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..369
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 354..369
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 307..329
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..306
None	No IPR available	PANTHER	PTHR15241:SF351	SERINE/ARGININE-RICH SPLICING FACTOR SR45A-LIKE ISOFORM X1	coord: 8..261
None	No IPR available	PANTHER	PTHR15241	TRANSFORMER-2-RELATED	coord: 8..261
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 30..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023905.2	IVF0023905.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048026	positive regulation of mRNA splicing, via spliceosome
cellular_component	GO:0005681	spliceosomal complex
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding