IVF0023889 (gene) Melon (IVF77) v1

Overview


Name	IVF0023889
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Small polypeptide DEVIL 10
Location	chr05: 25851337 .. 25852152 (-)
RNA-Seq Expression	IVF0023889
Synteny	IVF0023889

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAATACACCATTTCTTCAGCCTCCATATCCTCAAACTCCGTTCAACTTATCATTTCCCCTCTTTTCTCTCCTTCTCAATTTCCTCCGTCCACCGGTCTCCACCGTAATGTCCCTCGCATACGCCGTCGCACACTCTTCGCAGTCGACGCAACTCTGCCTCAGAAACCGCCGGAAAACCAGTTTTCGAAAGCGATGCTTCCGGATGATCAAGCAACAGAAAACCAGATTCTATATCCTCGGCCGTTGCATCTCCATGCTTCTTTGTTGGCACGATCATGATATTCCTGATTAAATCGCCTAAATCCACCATCGATTGTTGTTTTCTTCCCTCTGAATACGACAATATCAATGTTCTTTTAGTCCGCGAGAGCCTCCGATCGGAAATTGAACTCCGATTCTGAACGAATTGGAGGTGAATCGGAATGTTGATTAGGTATGAAATAGATCGGAGGGGTTAGGTATACGGTTTATTAATTTCTCACCGGCCGTTAAAATACAGCGCCGTGATTCGTTCGCTTGGAGTAGATTTCTCTTGATCGGCAGAGAATAGACAAATTGAAGGCAAGCGAAAACTAGTTTAATTTTCTCTTTTAACTTTTCTTCTTCTTCTTCTAATTTTAGTGTGATATTAGATCGTCGATGAACTTCATTCGACGGATACATGTATATAAACTGATTAGAAATTAAAATCGGACTCTGTTTTTGAGAACGATTTGAATTGAATCTGTATTTATGAATTTTGTTGAGATATCAATCATCAGATTATTAGTTCTTATCTTAGTGGATTCGTTTGCAAATTATGAAGGAAGTCAAC

mRNA sequence

ATAAATACACCATTTCTTCAGCCTCCATATCCTCAAACTCCGTTCAACTTATCATTTCCCCTCTTTTCTCTCCTTCTCAATTTCCTCCGTCCACCGGTCTCCACCGTAATGTCCCTCGCATACGCCGTCGCACACTCTTCGCAGTCGACGCAACTCTGCCTCAGAAACCGCCGGAAAACCAGTTTTCGAAAGCGATGCTTCCGGATGATCAAGCAACAGAAAACCAGATTCTATATCCTCGGCCGTTGCATCTCCATGCTTCTTTGTTGGCACGATCATGATATTCCTGATTAAATCGCCTAAATCCACCATCGATTGTTGTTTTCTTCCCTCTGAATACGACAATATCAATGTTCTTTTAGTCCGCGAGAGCCTCCGATCGGAAATTGAACTCCGATTCTGAACGAATTGGAGGTGAATCGGAATGTTGATTAGGTATGAAATAGATCGGAGGGGTTAGGTATACGGTTTATTAATTTCTCACCGGCCGTTAAAATACAGCGCCGTGATTCGTTCGCTTGGAGTAGATTTCTCTTGATCGGCAGAGAATAGACAAATTGAAGGCAAGCGAAAACTAGTTTAATTTTCTCTTTTAACTTTTCTTCTTCTTCTTCTAATTTTAGTGTGATATTAGATCGTCGATGAACTTCATTCGACGGATACATGTATATAAACTGATTAGAAATTAAAATCGGACTCTGTTTTTGAGAACGATTTGAATTGAATCTGTATTTATGAATTTTGTTGAGATATCAATCATCAGATTATTAGTTCTTATCTTAGTGGATTCGTTTGCAAATTATGAAGGAAGTCAAC

Coding sequence (CDS)

ATGTCCCTCGCATACGCCGTCGCACACTCTTCGCAGTCGACGCAACTCTGCCTCAGAAACCGCCGGAAAACCAGTTTTCGAAAGCGATGCTTCCGGATGATCAAGCAACAGAAAACCAGATTCTATATCCTCGGCCGTTGCATCTCCATGCTTCTTTGTTGGCACGATCATGATATTCCTGATTAA

Protein sequence

MSLAYAVAHSSQSTQLCLRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIPD

Homology

[Close]

BLAST of IVF0023889 vs. ExPASy Swiss-Prot
Match: Q6IM91 (Small polypeptide DEVIL 10 OS=Arabidopsis thaliana OX=3702 GN=DVL10 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 5.4e-10
Identity = 29/49 (59.18%), Postives = 34/49 (69.39%), Query Frame = 0


Query: 13 STQLCLRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIPD 62
          ++ L  +  RKT F  RC  M KQQ+TR YIL RC+SMLLCWHDH I D
Sbjct: 7  NSSLPTKPNRKTRFGDRCLLMAKQQRTRLYILRRCVSMLLCWHDHSISD 55

[Close]

BLAST of IVF0023889 vs. ExPASy Swiss-Prot
Match: Q7XXN8 (Small polypeptide DEVIL 16 OS=Arabidopsis thaliana OX=3702 GN=DVL16 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.1e-05
Identity = 20/39 (51.28%), Postives = 30/39 (76.92%), Query Frame = 0


Query: 25 SFRKRCFRMIKQQKTRFYILGRCISMLLCWHD--HDIPD 62
          +F ++C  ++K+Q+ +FYIL RCI+ML+CWHD  HD  D
Sbjct: 14 TFGQKCSHVVKKQRAKFYILRRCIAMLVCWHDQNHDRKD 52

[Close]

BLAST of IVF0023889 vs. ExPASy Swiss-Prot
Match: Q6IM93 (Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.1e-05
Identity = 19/46 (41.30%), Postives = 33/46 (71.74%), Query Frame = 0


Query: 13 STQLCLRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHD 59
          +T+   + + K  F ++C R++K+Q+ RFYI+ RC+ ML+CW DH+
Sbjct: 27 TTRSSRQKQGKYGFTRKCGRLVKEQRARFYIMRRCVVMLICWTDHN 72

[Close]

BLAST of IVF0023889 vs. ExPASy Swiss-Prot
Match: Q6IM86 (Small polypeptide DEVIL 15 OS=Arabidopsis thaliana OX=3702 GN=DVL15 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 3.1e-05
Identity = 21/49 (42.86%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 10  SSQSTQLC-LRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDH 58
           SS+S+ L  + +++  S   +CF++ K+ K+RFYI+ RC+ ML+CWH H
Sbjct: 95  SSKSSSLSRILSKKGASVTGKCFKVAKEHKSRFYIIKRCVLMLVCWHKH 143

[Close]

BLAST of IVF0023889 vs. ExPASy Swiss-Prot
Match: Q8S8S3 (Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 4.0e-05
Identity = 18/48 (37.50%), Postives = 34/48 (70.83%), Query Frame = 0


Query: 10 SSQSTQLCLRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDH 58
          S+ S+    + + + +F ++C R++K+Q+ RFYI+ RC+ ML+CW D+
Sbjct: 36 STSSSSFNGKKQGRCAFTRKCARLVKEQRARFYIMRRCVIMLICWRDN 83

[Close]

BLAST of IVF0023889 vs. ExPASy TrEMBL
Match: A0A0A0LIV1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005340 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.4e-24
Identity = 58/61 (95.08%), Postives = 59/61 (96.72%), Query Frame = 0


Query: 1  MSLAYAVAHSSQSTQLCLRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIP 60
          MSLAYAVAHSSQSTQL +RNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDI 
Sbjct: 1  MSLAYAVAHSSQSTQLRIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIT 60

Query: 61 D 62
          D
Sbjct: 61 D 61

[Close]

BLAST of IVF0023889 vs. ExPASy TrEMBL
Match: A0A7J6F8M0 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_006385 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-11
Identity = 36/61 (59.02%), Postives = 46/61 (75.41%), Query Frame = 0


Query: 1  MSLAYAVAHSSQSTQLCLRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIP 60
          M+ +Y ++ +S  T+   ++ RKT  RKRC  M+KQQKTRFYILGRC+SMLLCWHDH I 
Sbjct: 1  MTSSYYLSSASSGTR--RKSSRKTGLRKRCLLMVKQQKTRFYILGRCVSMLLCWHDHSIS 59

Query: 61 D 62
          D
Sbjct: 61 D 59

[Close]

BLAST of IVF0023889 vs. ExPASy TrEMBL
Match: A0A6P4AXU9 (uncharacterized protein LOC107431866 OS=Ziziphus jujuba OX=326968 GN=LOC107435386 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.3e-11
Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 0


Query: 3  LAYAVAHSSQSTQLCLRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIPD 62
          +A +  + + +++ C  N RKT  RKRCF M+KQQKTRFYILGRCISMLLCW DH + D
Sbjct: 1  MAVSSYYLTPTSRPCKINNRKTGLRKRCFLMVKQQKTRFYILGRCISMLLCWQDHAVSD 59

[Close]

BLAST of IVF0023889 vs. ExPASy TrEMBL
Match: A0A6P5XME8 (uncharacterized protein LOC111284813 OS=Durio zibethinus OX=66656 GN=LOC111284813 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.9e-11
Identity = 36/54 (66.67%), Postives = 41/54 (75.93%), Query Frame = 0


Query: 10 SSQSTQLCLRNR--RKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIPD 62
          SS  +  CLR++  RK SFR RC  M KQQKTRFYILGRC+SMLLCWHDH + D
Sbjct: 9  SSSKSNPCLRSQKPRKPSFRNRCLLMAKQQKTRFYILGRCVSMLLCWHDHSLSD 62

[Close]

BLAST of IVF0023889 vs. ExPASy TrEMBL
Match: A0A498KJW8 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_017954 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.1e-10
Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 0


Query: 19  RNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIPD 62
           ++ RK +FRKRC  M KQQKTRFYILGRC+SMLLCWHDH I D
Sbjct: 67  KSHRKIAFRKRCLMMAKQQKTRFYILGRCVSMLLCWHDHSISD 109

[Close]

BLAST of IVF0023889 vs. NCBI nr
Match: KGN60637.1 (hypothetical protein Csa_019376 [Cucumis sativus])

HSP 1 Score: 122 bits (306), Expect = 6.03e-35
Identity = 58/61 (95.08%), Postives = 59/61 (96.72%), Query Frame = 0


Query: 1  MSLAYAVAHSSQSTQLCLRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIP 60
          MSLAYAVAHSSQSTQL +RNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDI 
Sbjct: 1  MSLAYAVAHSSQSTQLRIRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIT 60

[Close]

BLAST of IVF0023889 vs. NCBI nr
Match: KAG7030417.1 (hypothetical protein SDJN02_08764, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 105 bits (261), Expect = 9.65e-28
Identity = 48/61 (78.69%), Postives = 53/61 (86.89%), Query Frame = 0


Query: 1  MSLAYAVAHSSQSTQLCLRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIP 60
          M  AY+ AH+SQSTQLCL NRR+TSFRKRC  MIKQQKTRFYIL RCISML+CW+D DIP
Sbjct: 29 MPSAYSAAHASQSTQLCLGNRRRTSFRKRCLLMIKQQKTRFYILARCISMLMCWNDRDIP 88

[Close]

BLAST of IVF0023889 vs. NCBI nr
Match: KAG6586417.1 (hypothetical protein SDJN03_19150, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 88.6 bits (218), Expect = 3.86e-21
Identity = 44/56 (78.57%), Postives = 45/56 (80.36%), Query Frame = 0


Query: 6  AVAHSSQSTQLCLRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIPD 61
          + A SSQS QL LR  RK SFRKRC RMIKQQKTRFYILGRCISMLLCW D DI D
Sbjct: 38 STALSSQSAQLRLRTCRKISFRKRCLRMIKQQKTRFYILGRCISMLLCWQDRDIHD 93

[Close]

BLAST of IVF0023889 vs. NCBI nr
Match: KAG2718566.1 (hypothetical protein I3760_03G226000 [Carya illinoinensis] >KAG7989032.1 hypothetical protein I3843_03G218000 [Carya illinoinensis])

HSP 1 Score: 83.2 bits (204), Expect = 1.88e-19
Identity = 36/41 (87.80%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 21 RRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIPD 61
          RRKT FRKRCF M KQQKTRFYILGRCISMLLCWHDHD+ D
Sbjct: 14 RRKTGFRKRCFLMAKQQKTRFYILGRCISMLLCWHDHDLSD 54

[Close]

BLAST of IVF0023889 vs. NCBI nr
Match: KAG6723749.1 (hypothetical protein I3842_03G223500 [Carya illinoinensis])

HSP 1 Score: 83.2 bits (204), Expect = 1.88e-19
Identity = 36/41 (87.80%), Postives = 37/41 (90.24%), Query Frame = 0


Query: 21 RRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIPD 61
          RRKT FRKRCF M KQQKTRFYILGRCISMLLCWHDHD+ D
Sbjct: 14 RRKTGFRKRCFLMAKQQKTRFYILGRCISMLLCWHDHDLSD 54

[Close]

BLAST of IVF0023889 vs. TAIR 10
Match: AT4G13395.1 (ROTUNDIFOLIA like 12 )

HSP 1 Score: 64.3 bits (155), Expect = 3.9e-11
Identity = 29/49 (59.18%), Postives = 34/49 (69.39%), Query Frame = 0


Query: 13 STQLCLRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHDIPD 62
          ++ L  +  RKT F  RC  M KQQ+TR YIL RC+SMLLCWHDH I D
Sbjct: 7  NSSLPTKPNRKTRFGDRCLLMAKQQRTRLYILRRCVSMLLCWHDHSISD 55

[Close]

BLAST of IVF0023889 vs. TAIR 10
Match: AT2G36985.1 (DVL family protein )

HSP 1 Score: 50.1 bits (118), Expect = 7.5e-07
Identity = 20/39 (51.28%), Postives = 30/39 (76.92%), Query Frame = 0


Query: 25 SFRKRCFRMIKQQKTRFYILGRCISMLLCWHD--HDIPD 62
          +F ++C  ++K+Q+ +FYIL RCI+ML+CWHD  HD  D
Sbjct: 14 TFGQKCSHVVKKQRAKFYILRRCIAMLVCWHDQNHDRKD 52

[Close]

BLAST of IVF0023889 vs. TAIR 10
Match: AT3G55515.1 (ROTUNDIFOLIA like 7 )

HSP 1 Score: 50.1 bits (118), Expect = 7.5e-07
Identity = 19/46 (41.30%), Postives = 33/46 (71.74%), Query Frame = 0


Query: 13 STQLCLRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDHD 59
          +T+   + + K  F ++C R++K+Q+ RFYI+ RC+ ML+CW DH+
Sbjct: 27 TTRSSRQKQGKYGFTRKCGRLVKEQRARFYIMRRCVVMLICWTDHN 72

[Close]

BLAST of IVF0023889 vs. TAIR 10
Match: AT3G46613.1 (ROTUNDIFOLIA like 4 )

HSP 1 Score: 48.5 bits (114), Expect = 2.2e-06
Identity = 21/49 (42.86%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 10  SSQSTQLC-LRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDH 58
           SS+S+ L  + +++  S   +CF++ K+ K+RFYI+ RC+ ML+CWH H
Sbjct: 95  SSKSSSLSRILSKKGASVTGKCFKVAKEHKSRFYIIKRCVLMLVCWHKH 143

[Close]

BLAST of IVF0023889 vs. TAIR 10
Match: AT2G39705.1 (ROTUNDIFOLIA like 8 )

HSP 1 Score: 48.1 bits (113), Expect = 2.9e-06
Identity = 18/48 (37.50%), Postives = 34/48 (70.83%), Query Frame = 0


Query: 10 SSQSTQLCLRNRRKTSFRKRCFRMIKQQKTRFYILGRCISMLLCWHDH 58
          S+ S+    + + + +F ++C R++K+Q+ RFYI+ RC+ ML+CW D+
Sbjct: 36 STSSSSFNGKKQGRCAFTRKCARLVKEQRARFYIMRRCVIMLICWRDN 83

The following BLAST results are available for this feature:

BLAST of IVF0023889 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6IM91	5.4e-10	59.18	Small polypeptide DEVIL 10 OS=Arabidopsis thaliana OX=3702 GN=DVL10 PE=3 SV=1	[more]
Q7XXN8	1.1e-05	51.28	Small polypeptide DEVIL 16 OS=Arabidopsis thaliana OX=3702 GN=DVL16 PE=2 SV=1	[more]
Q6IM93	1.1e-05	41.30	Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1	[more]
Q6IM86	3.1e-05	42.86	Small polypeptide DEVIL 15 OS=Arabidopsis thaliana OX=3702 GN=DVL15 PE=2 SV=1	[more]
Q8S8S3	4.0e-05	37.50	Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1	[more]

BLAST of IVF0023889 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIV1	2.4e-24	95.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005340 PE=4 SV=1	[more]
A0A7J6F8M0	1.7e-11	59.02	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_006385 PE=4 SV=1	[more]
A0A6P4AXU9	2.3e-11	59.32	uncharacterized protein LOC107431866 OS=Ziziphus jujuba OX=326968 GN=LOC10743538...	[more]
A0A6P5XME8	3.9e-11	66.67	uncharacterized protein LOC111284813 OS=Durio zibethinus OX=66656 GN=LOC11128481...	[more]
A0A498KJW8	1.1e-10	74.42	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_017954 PE=4 SV=1	[more]

BLAST of IVF0023889 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60637.1	6.03e-35	95.08	hypothetical protein Csa_019376 [Cucumis sativus]	[more]
KAG7030417.1	9.65e-28	78.69	hypothetical protein SDJN02_08764, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6586417.1	3.86e-21	78.57	hypothetical protein SDJN03_19150, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG2718566.1	1.88e-19	87.80	hypothetical protein I3760_03G226000 [Carya illinoinensis] >KAG7989032.1 hypothe...	[more]
KAG6723749.1	1.88e-19	87.80	hypothetical protein I3842_03G223500 [Carya illinoinensis]	[more]

BLAST of IVF0023889 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13395.1	3.9e-11	59.18	ROTUNDIFOLIA like 12	[more]
AT2G36985.1	7.5e-07	51.28	DVL family protein	[more]
AT3G55515.1	7.5e-07	41.30	ROTUNDIFOLIA like 7	[more]
AT3G46613.1	2.2e-06	42.86	ROTUNDIFOLIA like 4	[more]
AT2G39705.1	2.9e-06	37.50	ROTUNDIFOLIA like 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012552	DVL	PFAM	PF08137	DVL	coord: 35..53 e-value: 1.1E-11 score: 44.2
None	No IPR available	PANTHER	PTHR33102	DVL19-RELATED-RELATED	coord: 4..59
None	No IPR available	PANTHER	PTHR33102:SF57	DVL10	coord: 4..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023889.1	IVF0023889.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008285	negative regulation of cell population proliferation
biological_process	GO:0048367	shoot system development
cellular_component	GO:0005886	plasma membrane