IVF0023760 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGATGAGAAATGTGGTGGTTTTGTGGCTTGCCACGGCAGCTTTGGTCGGGGCTCAAGTCCCGAGTTGGTCAGTTTCGATCGTAAATGAGCTCAGTCACCTCGATTTGAATGTGCATTGTCGATCCAAGAACGATGATTTGGGAAATCATCACTTGGTTAAACGTGGAGATATTTACAAATGGAGCTTTAAGGAAAACTTTGGGGAACAACCTTGTTTTGGTGTACATTGGAGAAGTCAGATGCGTACGTCTCTTTGAAAGCTTTTGGCCCGAATCATGGACTAACACTTGGCTTCGTGATAGGTGTGGGCCTGAAGGAACTTGTATTTGGGTTGCTAAAGATGGTGGAATTTATTTGAAAAATAATCCTGCTAATCGTGATGAATTTGTTCACAAATGGTGGATAGGAAAGTAA ATGATGATGAGAAATGTGGTGGTTTTGTGGCTTGCCACGGCAGCTTTGGTCGGGGCTCAAGTCCCGAGTTGGTCAGTTTCGATCGTAAATGAGCTCAGTCACCTCGATTTGAATGTGCATTGTCGATCCAAGAACGATGATTTGGGAAATCATCACTTGGTTAAACAAGTCAGATGCGTACGTCTCTTTGAAAGCTTTTGGCCCGAATCATGGACTAACACTTGGCTTCGTGATAGGTGTGGGCCTGAAGGAACTTGTATTTGGGTTGCTAAAGATGGTGGAATTTATTTGAAAAATAATCCTGCTAATCGTGATGAATTTGTTCACAAATGGTGGATAGGAAAGTAA ATGATGATGAGAAATGTGGTGGTTTTGTGGCTTGCCACGGCAGCTTTGGTCGGGGCTCAAGTCCCGAGTTGGTCAGTTTCGATCGTAAATGAGCTCAGTCACCTCGATTTGAATGTGCATTGTCGATCCAAGAACGATGATTTGGGAAATCATCACTTGGTTAAACAAGTCAGATGCGTACGTCTCTTTGAAAGCTTTTGGCCCGAATCATGGACTAACACTTGGCTTCGTGATAGGTGTGGGCCTGAAGGAACTTGTATTTGGGTTGCTAAAGATGGTGGAATTTATTTGAAAAATAATCCTGCTAATCGTGATGAATTTGTTCACAAATGGTGGATAGGAAAGTAA MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVKQVRCVRLFESFWPESWTNTWLRDRCGPEGTCIWVAKDGGIYLKNNPANRDEFVHKWWIGK Homology
BLAST of IVF0023760 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.5e-08 Identity = 40/130 (30.77%), Postives = 60/130 (46.15%), Query Frame = 0
BLAST of IVF0023760 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 6.9e-06 Identity = 35/122 (28.69%), Postives = 53/122 (43.44%), Query Frame = 0
BLAST of IVF0023760 vs. ExPASy TrEMBL
Match: A0A5A7U5P7 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G001430 PE=3 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 4.4e-56 Identity = 108/139 (77.70%), Postives = 110/139 (79.14%), Query Frame = 0
BLAST of IVF0023760 vs. ExPASy TrEMBL
Match: A0A1S3CGQ6 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500548 PE=3 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 4.4e-56 Identity = 108/139 (77.70%), Postives = 110/139 (79.14%), Query Frame = 0
BLAST of IVF0023760 vs. ExPASy TrEMBL
Match: A0A5A7U8F6 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G001490 PE=3 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 1.1e-35 Identity = 78/136 (57.35%), Postives = 92/136 (67.65%), Query Frame = 0
BLAST of IVF0023760 vs. ExPASy TrEMBL
Match: A0A1S3CG44 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500541 PE=3 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 5.6e-35 Identity = 77/136 (56.62%), Postives = 91/136 (66.91%), Query Frame = 0
BLAST of IVF0023760 vs. ExPASy TrEMBL
Match: A0A5D3C934 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00380 PE=3 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 2.1e-34 Identity = 77/136 (56.62%), Postives = 91/136 (66.91%), Query Frame = 0
BLAST of IVF0023760 vs. NCBI nr
Match: KAA0050598.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07842.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]) HSP 1 Score: 227 bits (578), Expect = 2.00e-74 Identity = 108/139 (77.70%), Postives = 110/139 (79.14%), Query Frame = 0
BLAST of IVF0023760 vs. NCBI nr
Match: XP_008462118.1 (PREDICTED: pumilio homolog 15-like [Cucumis melo]) HSP 1 Score: 227 bits (578), Expect = 2.36e-74 Identity = 108/139 (77.70%), Postives = 110/139 (79.14%), Query Frame = 0
BLAST of IVF0023760 vs. NCBI nr
Match: XP_004139725.1 (S-protein homolog 1-like [Cucumis sativus]) HSP 1 Score: 216 bits (549), Expect = 6.22e-70 Identity = 102/139 (73.38%), Postives = 108/139 (77.70%), Query Frame = 0
BLAST of IVF0023760 vs. NCBI nr
Match: KAE8650575.1 (hypothetical protein Csa_010962 [Cucumis sativus]) HSP 1 Score: 214 bits (544), Expect = 3.05e-69 Identity = 100/139 (71.94%), Postives = 106/139 (76.26%), Query Frame = 0
BLAST of IVF0023760 vs. NCBI nr
Match: XP_031739191.1 (S-protein homolog 1-like [Cucumis sativus]) HSP 1 Score: 214 bits (544), Expect = 3.60e-69 Identity = 100/139 (71.94%), Postives = 106/139 (76.26%), Query Frame = 0
BLAST of IVF0023760 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 59.7 bits (143), Expect = 1.8e-09 Identity = 40/130 (30.77%), Postives = 60/130 (46.15%), Query Frame = 0
BLAST of IVF0023760 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 51.6 bits (122), Expect = 4.9e-07 Identity = 35/122 (28.69%), Postives = 53/122 (43.44%), Query Frame = 0
BLAST of IVF0023760 vs. TAIR 10
Match: AT5G04347.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 46.6 bits (109), Expect = 1.6e-05 Identity = 31/129 (24.03%), Postives = 57/129 (44.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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