IVF0023457 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAACCATCGATTTCTTCTGCGCTTCCCAAGCCTCCACCGCCGTCGACCAACCTTCATCTACCCCAGCCACCGTTGCCGCCGCCGGAAGGTTTATCGACCGCCACAACCCAATCATCGCCGACGGGAGACGATCAAACGTCACTTCTAGAACTAATTTCCCCAACCCTCCATGTTCCTCCCAATACTCCCCCATTAATCCTCTCCCTTACCATCAACTCCACGCTGCCGCCTCCCCTAATGTCGCCGGGGACCAGATCCGGTCCGAAAATCATAAGGATTTGAAAATGAAGAAGAAGAAGAAGAAGATCAAGAAAAGTTCATCGATTGTTACAACTGACTTTGTAAGGTCTGTTCCTTCATTCCTAATTCAAACTCTTATCCATTCCCTTTAATTCTTTCTCATTTTATTTGCTTTTTATATTTATTTTACTTTTCCTTTTTCTTCAAATCTACGTTACAAAATTTCACATTTTCATATATAACTATTTTAAAATGTTCATTTATTATCTTTAAGTTTTTAAAATTTTTTATTTTTACATGTTAACTATAAAACTTTGAAAATATTTAAAATAGATAGCAATAAAATTTATATTTTATTATACTCGTACATACTCTAATTTATTATTTATGCTATATTTGAAAATGTTTCCTTAAAATACTTATTGATATAATTTTTTTATCAATTTTTATAATTTAACATTCTTATCGAGATGAAATATTTTAAATTTTGGATTATTTAGATCCAATCGAAATAATATTTTTTAGCAACATTTAAGTACATTTTTAGTACATGAGGATATTCAACATTTGAGTCTTTTGGTGTCAGTTGAGCTAAATAAAAATCAGCTTATTGAACACTATGATGAGGGTAACCAATCCGCTTATGACAATATTTTTCGTATAATTTGGAATACTCAATAGACAAAGCTTTGATTCATAATAAAACTAATTTTATTCACTTCATTCTCGTCGCATGTAAATAACGACTCAAAATATTTCGTGAAAAGAAGCAAGCGAGTAAAATTTGTATTTATAAAATATGATTAGATAATTTAATAAATGCACCAAAGATTAGTACAACCTAGGAATATGCACTAAATTAAAAGTTTTATTTTTGGAAAAATAAATGAAAGAAATTATTAGGAATTGGTGTGGGAAATTGAATTCATGAATTGAAGAATAACAAATTAGTTTTGAGGAATCAGGTGGAGTTGTGCAAAGCCGAGTGATTTGGCTACGCCTCCTGGGTCGATGCGATACCTTTTGAACGACAAGTCGGTTCGTGATGGTTCTATGGATCGGATTTCCACGCCTATCCCTATTCACAAAAACCTTACTCCTTCTGACCAACAACATCCACACCAACCTCAACCAACGCCCCAGATTTCTTCCGACGACCACTGCAATAAATCTCCACCTTCCAATCAGGTTAGTCTAAGAGACATTATTATAAATGAAAAAACAATACCCACTTCAAATATATATCTATTTTTTTAAAATATTTTGATTCTATTTTTAGAAATTTTCTTAAATATAATTTTAAATATATATATATATATATTTTTTGATTTTTTTAATGGACTAAATAGTTTTAATTTCTTTAAAGAAGTTAGGATTTAAAAGAACTTATTGGATTGGATGGAAACTCGAAAAATTAAAAATTATTAAATACTTTCAAAATTTGAAAGACCAAATATATTTATTTAATTTTTTTTTTCTTTTGTATTCTTTCTCTTATTCATAAAAAAGAAAAATTGGTAGAGAGAACTTTTGTATTATAAAATAATTATAATTCAATGATATGTGGGAATGTAATGGTGCAAAAGAAAATTGTAATATTTGTGTGTATGTTTAAATTAATGTGATCAAATACAAAATAATAATAATGATAAAATAAAATATGATTTAATGTGAAGTATTATTATCAGGTTGTTGTTTTGAGGGTATCATTGCATTGCAGAGGCTGTGAAGGAAAACTGAGGAAACATCTTTCCAAAATGGAAGGTAAGCTTAATTAATTAACCCCACCATACTAATACTAATACATACATACATATAAAATTATCTAAAAGATTAAGAGAATCAAATTAAGTTTATATATTTGTAAACAGTCCTTTTTTGTCCTTTCCAAAAGGAACAAAAACAATAAAATGGAGTTTAGTCTATTTTGATGAAAACTCTATGGTCCCAAGAAATAATATATAGTAAAAATTTCAAACCACATTCAACTTTTTTAAAACAATATAGAAATTAAATTAACACTTTTTTTTTATTATTATTTTTATATTTCAAATTTTCAAACTCAATATTTCTAATAAATTTTATATATTGATTTATTTTTAACCTTTTAAAATAAGTCGAACTAAAACAACACTCTCACAATTCTTGATCTGTTGAATGTAGGAGTGAACTCATTCAACATTGATTTTGCGGCAAAAAAGGTGACGATAATGGGGAATATAACACCGCAAGGTATGTTGGAAAGTGTATCAAAGGTTAAAAATGCCCAATTTTGGCCATATGCAGACCCAACTCCAAACCCTAATCTCAATCGAAATCATCACCCAAATGGATTGGAAAAAACCTAACAAAAATTTTATTTTCTAGTTTCTTTTTTAATTTTTGTGAAAATATTAAGCTTATGTTTATTGTGACAATCTCGACTACCATTATATATGAAAATGTTATAAAGTTTGGATTGAATCGTTACAAAAAGAAGTAAAAGCAAAATGATTAGGAATAATAAGGTTAATATTAATGTATATTTATTTTAGGATAAGTGAATCATTAAAGTGAGTTGTTGGTTGGTTTTGTTTAAAAGCTTAGATTAGAAATTTATGAATGAGGAAATAAAAACCCTATTTTCTTATATTGTTAAATGGGGATGACTTTAAATATCTTTTATTGGAATTTTAATTCCTTGTTTTGGTGAAATTATATGGAATAATAGTGTTTTGTTTGCCTTCTCAATTTTAGTATATTTACCTTTTTTCTTTTATAGGTGTTGGTTTACATTCATAGATTGATAATAATAAACCCTTATTCCAATAATTGACAAAGCACAAAATCAATTTCATATATATATATATATAGATGGTATGATTTATGGTTAATTTGTTGTTTATTTAAGTCTTAATTGAAAATTATCTAAACTAACTTATTAAACGTTTCATATTATCAAAATAGCGTATTATTTAAAAGTTGTTGAACTAGTTTTTTTCGGTGATCGATCAATAAGATTATCTTAAAACTTAAGAGTATTAACGTCTTAAAATACTGAGCATTAATATCTTGTCAAATCTCATAACGGATTTTAATTGATTTTTTAAATTTTCCTCAAATTTGATTACCCGTATCATAAATCTTATATCAATTTTTTTTTTACACAATCTCTCAAATATTTATCCGAATTTATGTGGTGATTAATTTACAATTAACATGTTTATATAAAATTTGGGAAGATTACGATAAAAAATTTGACGAGAGATAGTTGTTGCTAAAACTTTTAAATTGCATGATATTTGAAAAAAGTTATGTTGGTATCGATTCATCCAAAATTATCAACTTTTTGAGTTTTCTTGATACAATTTTGTTCGAAATAGATCGAGAACCATTTTTTTTCTTCCAAATATTGGTTAGAATTTTGGTACTCAAGAATCCCTTAGCAAAGTTAAAAAAAAACAAACTTTATACAAAATCTTGGTCTCGATCTCGAGCAAGAAAAGAAAAACTAGTTCAATCACCTCCTAAGAAAGATGCTAATTTGATAATGTGAAAACTTCAATAAGTTAGTTTAGACAATTTCCTCTCATCATTTTAATTAGAGGGATAAATTATTTAAAATTATTGAGTTATGCTCATTTTAGCTATTCTTTTTACATGATTTTTAAAGAAAATCAAGTATTTTTTTATGCACCAATTATCCAAGTACTCTTTTAGTTGGCTAGGTTATAATGTGATTGGGTGTAAATGTACGTGGTCTTTGTCAATAAACTAACATAATGTGAATTATTTTAGTTCAAGTTACGCTCATCAATCGTCTAATTATAATTTATCGTCTAATTATAATTTATGATATAACAAACTTATAATCTTTTATTTGTACATGATAAGAATAGAATGTATATGTCGAAGTGAGTTTCGCTGA ATGAAAACCATCGATTTCTTCTGCGCTTCCCAAGCCTCCACCGCCGTCGACCAACCTTCATCTACCCCAGCCACCGTTGCCGCCGCCGGAAGGTTTATCGACCGCCACAACCCAATCATCGCCGACGGGAGACGATCAAACGTCACTTCTAGAACTAATTTCCCCAACCCTCCATGTTCCTCCCAATACTCCCCCATTAATCCTCTCCCTTACCATCAACTCCACGCTGCCGCCTCCCCTAATGTCGCCGGGGACCAGATCCGGTCCGAAAATCATAAGGATTTGAAAATGAAGAAGAAGAAGAAGAAGATCAAGAAAAGTTCATCGATTGTTACAACTGACTTTGTAAGGTGGAGTTGTGCAAAGCCGAGTGATTTGGCTACGCCTCCTGGGTCGATGCGATACCTTTTGAACGACAAGTCGGTTCGTGATGGTTCTATGGATCGGATTTCCACGCCTATCCCTATTCACAAAAACCTTACTCCTTCTGACCAACAACATCCACACCAACCTCAACCAACGCCCCAGATTTCTTCCGACGACCACTGCAATAAATCTCCACCTTCCAATCAGGTTGTTGTTTTGAGGGTATCATTGCATTGCAGAGGCTGTGAAGGAAAACTGAGGAAACATCTTTCCAAAATGGAAGGAGTGAACTCATTCAACATTGATTTTGCGGCAAAAAAGGTGACGATAATGGGGAATATAACACCGCAAGAATGTATATGTCGAAGTGAGTTTCGCTGA ATGAAAACCATCGATTTCTTCTGCGCTTCCCAAGCCTCCACCGCCGTCGACCAACCTTCATCTACCCCAGCCACCGTTGCCGCCGCCGGAAGGTTTATCGACCGCCACAACCCAATCATCGCCGACGGGAGACGATCAAACGTCACTTCTAGAACTAATTTCCCCAACCCTCCATGTTCCTCCCAATACTCCCCCATTAATCCTCTCCCTTACCATCAACTCCACGCTGCCGCCTCCCCTAATGTCGCCGGGGACCAGATCCGGTCCGAAAATCATAAGGATTTGAAAATGAAGAAGAAGAAGAAGAAGATCAAGAAAAGTTCATCGATTGTTACAACTGACTTTGTAAGGTGGAGTTGTGCAAAGCCGAGTGATTTGGCTACGCCTCCTGGGTCGATGCGATACCTTTTGAACGACAAGTCGGTTCGTGATGGTTCTATGGATCGGATTTCCACGCCTATCCCTATTCACAAAAACCTTACTCCTTCTGACCAACAACATCCACACCAACCTCAACCAACGCCCCAGATTTCTTCCGACGACCACTGCAATAAATCTCCACCTTCCAATCAGGTTGTTGTTTTGAGGGTATCATTGCATTGCAGAGGCTGTGAAGGAAAACTGAGGAAACATCTTTCCAAAATGGAAGGAGTGAACTCATTCAACATTGATTTTGCGGCAAAAAAGGTGACGATAATGGGGAATATAACACCGCAAGAATGTATATGTCGAAGTGAGTTTCGCTGA MKTIDFFCASQASTAVDQPSSTPATVAAAGRFIDRHNPIIADGRRSNVTSRTNFPNPPCSSQYSPINPLPYHQLHAAASPNVAGDQIRSENHKDLKMKKKKKKIKKSSSIVTTDFVRWSCAKPSDLATPPGSMRYLLNDKSVRDGSMDRISTPIPIHKNLTPSDQQHPHQPQPTPQISSDDHCNKSPPSNQVVVLRVSLHCRGCEGKLRKHLSKMEGVNSFNIDFAAKKVTIMGNITPQECICRSEFR Homology
BLAST of IVF0023457 vs. ExPASy Swiss-Prot
Match: Q8RXH8 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAKR3 PE=2 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.7e-25 Identity = 100/257 (38.91%), Postives = 127/257 (49.42%), Query Frame = 0
BLAST of IVF0023457 vs. ExPASy Swiss-Prot
Match: Q8LDS4 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAKR1 PE=1 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.1e-23 Identity = 109/317 (34.38%), Postives = 134/317 (42.27%), Query Frame = 0
BLAST of IVF0023457 vs. ExPASy Swiss-Prot
Match: Q58FZ0 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAKR2 PE=2 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 6.0e-23 Identity = 91/247 (36.84%), Postives = 119/247 (48.18%), Query Frame = 0
BLAST of IVF0023457 vs. ExPASy Swiss-Prot
Match: Q94BT9 (Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2) HSP 1 Score: 61.2 bits (147), Expect = 1.9e-08 Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0
BLAST of IVF0023457 vs. ExPASy Swiss-Prot
Match: Q84J88 (Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX=3702 GN=HIPP36 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.9e-08 Identity = 25/46 (54.35%), Postives = 37/46 (80.43%), Query Frame = 0
BLAST of IVF0023457 vs. ExPASy TrEMBL
Match: A0A5A7TZF0 (HMA domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001570 PE=4 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 1.6e-132 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
BLAST of IVF0023457 vs. ExPASy TrEMBL
Match: A0A1S3BIC7 (uncharacterized protein LOC103489885 OS=Cucumis melo OX=3656 GN=LOC103489885 PE=4 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 1.6e-132 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
BLAST of IVF0023457 vs. ExPASy TrEMBL
Match: A0A0A0L239 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G293260 PE=4 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 9.0e-107 Identity = 212/247 (85.83%), Postives = 217/247 (87.85%), Query Frame = 0
BLAST of IVF0023457 vs. ExPASy TrEMBL
Match: A0A6J1ILS7 (protein SODIUM POTASSIUM ROOT DEFECTIVE 3-like OS=Cucurbita maxima OX=3661 GN=LOC111477619 PE=4 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 1.6e-82 Identity = 176/249 (70.68%), Postives = 192/249 (77.11%), Query Frame = 0
BLAST of IVF0023457 vs. ExPASy TrEMBL
Match: A0A6J1GEB0 (protein SODIUM POTASSIUM ROOT DEFECTIVE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111453393 PE=4 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 6.5e-81 Identity = 176/246 (71.54%), Postives = 190/246 (77.24%), Query Frame = 0
BLAST of IVF0023457 vs. NCBI nr
Match: XP_008447442.1 (PREDICTED: uncharacterized protein LOC103489885 [Cucumis melo] >KAA0047336.1 HMA domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 482 bits (1241), Expect = 4.98e-171 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
BLAST of IVF0023457 vs. NCBI nr
Match: XP_011653614.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 3 isoform X1 [Cucumis sativus] >KGN54216.1 hypothetical protein Csa_017964 [Cucumis sativus]) HSP 1 Score: 397 bits (1020), Expect = 2.66e-137 Identity = 212/247 (85.83%), Postives = 217/247 (87.85%), Query Frame = 0
BLAST of IVF0023457 vs. NCBI nr
Match: XP_038881231.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 3-like isoform X2 [Benincasa hispida]) HSP 1 Score: 372 bits (956), Expect = 1.19e-127 Identity = 198/243 (81.48%), Postives = 211/243 (86.83%), Query Frame = 0
BLAST of IVF0023457 vs. NCBI nr
Match: XP_038881230.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 3-like isoform X1 [Benincasa hispida]) HSP 1 Score: 366 bits (939), Expect = 5.65e-125 Identity = 198/249 (79.52%), Postives = 211/249 (84.74%), Query Frame = 0
BLAST of IVF0023457 vs. NCBI nr
Match: XP_031739629.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 3 isoform X2 [Cucumis sativus]) HSP 1 Score: 352 bits (902), Expect = 9.06e-120 Identity = 189/224 (84.38%), Postives = 194/224 (86.61%), Query Frame = 0
BLAST of IVF0023457 vs. TAIR 10
Match: AT3G53530.1 (Chloroplast-targeted copper chaperone protein ) HSP 1 Score: 117.9 bits (294), Expect = 1.2e-26 Identity = 100/257 (38.91%), Postives = 127/257 (49.42%), Query Frame = 0
BLAST of IVF0023457 vs. TAIR 10
Match: AT3G53530.2 (Chloroplast-targeted copper chaperone protein ) HSP 1 Score: 113.2 bits (282), Expect = 2.9e-25 Identity = 100/258 (38.76%), Postives = 127/258 (49.22%), Query Frame = 0
BLAST of IVF0023457 vs. TAIR 10
Match: AT5G02600.2 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 110.9 bits (276), Expect = 1.5e-24 Identity = 109/317 (34.38%), Postives = 134/317 (42.27%), Query Frame = 0
BLAST of IVF0023457 vs. TAIR 10
Match: AT5G02600.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 110.9 bits (276), Expect = 1.5e-24 Identity = 109/317 (34.38%), Postives = 134/317 (42.27%), Query Frame = 0
BLAST of IVF0023457 vs. TAIR 10
Match: AT2G37390.1 (Chloroplast-targeted copper chaperone protein ) HSP 1 Score: 109.4 bits (272), Expect = 4.2e-24 Identity = 91/247 (36.84%), Postives = 119/247 (48.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|