IVF0023410 (gene) Melon (IVF77) v1

Overview


Name	IVF0023410
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	photosystem II 5 kDa protein, chloroplastic
Location	chr05: 1085111 .. 1085835 (-)
RNA-Seq Expression	IVF0023410
Synteny	IVF0023410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGGATGATGTCTTCAATGGAAAGAATCAACATGAACCTTCAATCACTTCACTTCCTCCCACACTCCCAAACATAAACTACATCCTATTTCTCCTTCACCCAATTCCTCAACTTATCAACAATCTCTCTAACCCCAATTTCTCAAATTTCCTAAATATGGCTTCCATGGCTATGACAGCTTCCTTCCTCCCCACCACCGCCACCAAACAACCCTCCGCCACCCCCCGTAGAGCCCTTATTGTTGCCAAAGCATCCACCTCTAACGAAACCTCCAATGTCAACTTGGAGGTCAAGAATGTGAAGGTAGAGAGCAGGCAAGGGCGGCGGGAGTTGGTGGCGGCTGCTGTCACAGTAGCTGCGGCAACCTTGGCGAAGGCGGCGATGGCGGATGAGCCGGCACGTGGGTCTCCTGAAGCCAAGCAGAAGTATGCTCCAATCTGTGTCACAATGCCTACTGCCCGTATTTGCCGCAAGTGATTTTGAAGAGATGTATTTTTTTTCTCTGTTGTCTTTCTTCTTCTTGTCTATTAAAACCCTTCCATTTGGTTTCAGACTTTGGAGTTTGATTGTAAAATCTGTAAAACAAAGCTATGAATTGCCATGAATCTCTCTCTTCATGTCCTTTTTTCTTGTTTTTGCCTTTCTCAGTCTCAAAGTTCATTCAAGTATTCTTTTTTTCTTCTTCACATTTTATCAATGTTGATGATCATAACACTATACAAAC

mRNA sequence

AATGGATGATGTCTTCAATGGAAAGAATCAACATGAACCTTCAATCACTTCACTTCCTCCCACACTCCCAAACATAAACTACATCCTATTTCTCCTTCACCCAATTCCTCAACTTATCAACAATCTCTCTAACCCCAATTTCTCAAATTTCCTAAATATGGCTTCCATGGCTATGACAGCTTCCTTCCTCCCCACCACCGCCACCAAACAACCCTCCGCCACCCCCCGTAGAGCCCTTATTGTTGCCAAAGCATCCACCTCTAACGAAACCTCCAATGTCAACTTGGAGGTCAAGAATGTGAAGGTAGAGAGCAGGCAAGGGCGGCGGGAGTTGGTGGCGGCTGCTGTCACAGTAGCTGCGGCAACCTTGGCGAAGGCGGCGATGGCGGATGAGCCGGCACGTGGGTCTCCTGAAGCCAAGCAGAAGTATGCTCCAATCTGTGTCACAATGCCTACTGCCCGTATTTGCCGCAAGTGATTTTGAAGAGATGTATTTTTTTTCTCTGTTGTCTTTCTTCTTCTTGTCTATTAAAACCCTTCCATTTGGTTTCAGACTTTGGAGTTTGATTGTAAAATCTGTAAAACAAAGCTATGAATTGCCATGAATCTCTCTCTTCATGTCCTTTTTTCTTGTTTTTGCCTTTCTCAGTCTCAAAGTTCATTCAAGTATTCTTTTTTTCTTCTTCACATTTTATCAATGTTGATGATCATAACACTATACAAAC

Coding sequence (CDS)

ATGGATGATGTCTTCAATGGAAAGAATCAACATGAACCTTCAATCACTTCACTTCCTCCCACACTCCCAAACATAAACTACATCCTATTTCTCCTTCACCCAATTCCTCAACTTATCAACAATCTCTCTAACCCCAATTTCTCAAATTTCCTAAATATGGCTTCCATGGCTATGACAGCTTCCTTCCTCCCCACCACCGCCACCAAACAACCCTCCGCCACCCCCCGTAGAGCCCTTATTGTTGCCAAAGCATCCACCTCTAACGAAACCTCCAATGTCAACTTGGAGGTCAAGAATGTGAAGGTAGAGAGCAGGCAAGGGCGGCGGGAGTTGGTGGCGGCTGCTGTCACAGTAGCTGCGGCAACCTTGGCGAAGGCGGCGATGGCGGATGAGCCGGCACGTGGGTCTCCTGAAGCCAAGCAGAAGTATGCTCCAATCTGTGTCACAATGCCTACTGCCCGTATTTGCCGCAAGTGA

Protein sequence

MDDVFNGKNQHEPSITSLPPTLPNINYILFLLHPIPQLINNLSNPNFSNFLNMASMAMTASFLPTTATKQPSATPRRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELVAAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK

Homology

[Close]

BLAST of IVF0023410 vs. ExPASy Swiss-Prot
Match: Q39195 (Photosystem II 5 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBT PE=3 SV=2)

HSP 1 Score: 80.9 bits (198), Expect = 1.4e-14
Identity = 58/107 (54.21%), Postives = 71/107 (66.36%), Query Frame = 0


Query: 53  MASMAMTASFLPTTATKQPSATPRRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELV 112
           MASM MTA+F P  A K PSAT  R L V +ASTS+ T   +LEVK  +  S   RR+L+
Sbjct: 1   MASMTMTATFFPAVA-KVPSATGGRRLSVVRASTSDNTP--SLEVK--EQSSTTMRRDLM 60

Query: 113 AAAVTVAAATLAKAAMA--DEPARGSPEAKQKYAPICVTMPTARICR 158
             A   A  +LAK AMA  +EP RG+  AK+KYA +CVTMPTA+ICR
Sbjct: 61  FTAAAAAVCSLAKVAMAEEEEPKRGTEAAKKKYAQVCVTMPTAKICR 102

[Close]

BLAST of IVF0023410 vs. ExPASy Swiss-Prot
Match: P31336 (Photosystem II 5 kDa protein, chloroplastic OS=Gossypium hirsutum OX=3635 GN=PSBT PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.7e-13
Identity = 52/106 (49.06%), Postives = 66/106 (62.26%), Query Frame = 0


Query: 53  MASMAMTASFLPTT-ATKQPSATPRRALIVAKASTSNETSNVNLEVKNVKVESRQGRREL 112
           MAS+ MT SFL TT  TK      +R L+VA A+   +  +V +  +  K E   GRRE+
Sbjct: 1   MASITMTTSFLSTTNLTKGSPRITQRRLVVANAAKGAQVESVQMSGER-KTEGNNGRREM 60

Query: 113 VAAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICR 158
           + AA   A  ++A  A A EP RGS EAK+ YAP+CVTMPTARICR
Sbjct: 61  MFAAAAAAICSVAGVATA-EPKRGSAEAKKAYAPVCVTMPTARICR 104

[Close]

BLAST of IVF0023410 vs. ExPASy Swiss-Prot
Match: B3EWI4 (Photosystem II 5 kDa protein, chloroplastic OS=Petunia hybrida OX=4102 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 49/108 (45.37%), Postives = 65/108 (60.19%), Query Frame = 0


Query: 53  MASMAMTASFL--PTTATKQPSATPRRALIVAKASTSNETSNVNLEVKNVKVESRQGRRE 112
           MAS+ M +SFL   T A  +  +  RR +++ KA    E    N+ +   +     GRRE
Sbjct: 1   MASITMMSSFLGGSTVAPAKVPSANRRGVVMVKAMHEGEN---NVVISKNEESKNSGRRE 60

Query: 113 LVAAAVTVAAATLAKAAMAD-EPARGSPEAKQKYAPICVTMPTARICR 158
           L  A    AA ++AK AMAD EP RG+PEAK+KY+ +CVT PTARICR
Sbjct: 61  LFFAMAAAAACSVAKTAMADEEPKRGTPEAKKKYSSVCVTNPTARICR 105

[Close]

BLAST of IVF0023410 vs. ExPASy TrEMBL
Match: A0A5A7TID9 (Photosystem II 5 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00980 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 8.1e-77
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MDDVFNGKNQHEPSITSLPPTLPNINYILFLLHPIPQLINNLSNPNFSNFLNMASMAMTA 60
           MDDVFNGKNQHEPSITSLPPTLPNINYILFLLHPIPQLINNLSNPNFSNFLNMASMAMTA
Sbjct: 1   MDDVFNGKNQHEPSITSLPPTLPNINYILFLLHPIPQLINNLSNPNFSNFLNMASMAMTA 60

Query: 61  SFLPTTATKQPSATPRRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELVAAAVTVAA 120
           SFLPTTATKQPSATPRRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELVAAAVTVAA
Sbjct: 61  SFLPTTATKQPSATPRRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELVAAAVTVAA 120

Query: 121 ATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 159
           ATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK
Sbjct: 121 ATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 158

[Close]

BLAST of IVF0023410 vs. ExPASy TrEMBL
Match: A0A1S3BML8 (photosystem II 5 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491503 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 8.1e-77
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MDDVFNGKNQHEPSITSLPPTLPNINYILFLLHPIPQLINNLSNPNFSNFLNMASMAMTA 60
           MDDVFNGKNQHEPSITSLPPTLPNINYILFLLHPIPQLINNLSNPNFSNFLNMASMAMTA
Sbjct: 1   MDDVFNGKNQHEPSITSLPPTLPNINYILFLLHPIPQLINNLSNPNFSNFLNMASMAMTA 60

Query: 61  SFLPTTATKQPSATPRRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELVAAAVTVAA 120
           SFLPTTATKQPSATPRRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELVAAAVTVAA
Sbjct: 61  SFLPTTATKQPSATPRRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELVAAAVTVAA 120

Query: 121 ATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 159
           ATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK
Sbjct: 121 ATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 158

[Close]

BLAST of IVF0023410 vs. ExPASy TrEMBL
Match: A0A0A0KIB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G439930 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 6.5e-42
Identity = 100/106 (94.34%), Postives = 103/106 (97.17%), Query Frame = 0


Query: 53  MASMAMTASFLPTTATKQPSATPRRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELV 112
           MASMAMTASFLPTTATKQPS+T RR LIVAKASTSN+ SNVN+EVKNVKVESRQGRRELV
Sbjct: 1   MASMAMTASFLPTTATKQPSSTARRPLIVAKASTSNQASNVNMEVKNVKVESRQGRRELV 60

Query: 113 AAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 159
           AAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK
Sbjct: 61  AAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 106

[Close]

BLAST of IVF0023410 vs. ExPASy TrEMBL
Match: A0A6J1J874 (photosystem II 5 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111484352 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.0e-31
Identity = 86/110 (78.18%), Postives = 92/110 (83.64%), Query Frame = 0


Query: 53  MASMAMTASFLPTTATKQPSATPRRALIVAKASTS----NETSNVNLEVKNVKVESRQGR 112
           MASM++TASFLP TAT+  +A  RRAL V KASTS    +  SN NLE+KNVKVES QGR
Sbjct: 1   MASMSITASFLPFTATQPSAAAARRALFVTKASTSAAATDSNSNANLEIKNVKVESSQGR 60

Query: 113 RELVAAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 159
           RELVAAAVTVAAAT AKAAMADEP RGS EAKQKYAPICVTMPTARICRK
Sbjct: 61  RELVAAAVTVAAATFAKAAMADEPPRGSAEAKQKYAPICVTMPTARICRK 110

[Close]

BLAST of IVF0023410 vs. ExPASy TrEMBL
Match: A0A6J1FY72 (photosystem II 5 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449001 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.0e-31
Identity = 86/110 (78.18%), Postives = 92/110 (83.64%), Query Frame = 0


Query: 53  MASMAMTASFLPTTATKQPSATPRRALIVAKASTS----NETSNVNLEVKNVKVESRQGR 112
           MASM++TASFLP TAT+  +A  RRAL V KASTS    +  SN NLE+KNVKVES QGR
Sbjct: 1   MASMSITASFLPFTATQPSAAAARRALFVTKASTSAAATDSNSNANLEIKNVKVESSQGR 60

Query: 113 RELVAAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 159
           RELVAAAVTVAAAT AKAAMADEP RGS EAKQKYAPICVTMPTARICRK
Sbjct: 61  RELVAAAVTVAAATFAKAAMADEPPRGSAEAKQKYAPICVTMPTARICRK 110

[Close]

BLAST of IVF0023410 vs. NCBI nr
Match: XP_008449703.1 (PREDICTED: photosystem II 5 kDa protein, chloroplastic [Cucumis melo] >KAA0041421.1 photosystem II 5 kDa protein [Cucumis melo var. makuwa] >TYJ96132.1 photosystem II 5 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 301 bits (770), Expect = 1.17e-102
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MDDVFNGKNQHEPSITSLPPTLPNINYILFLLHPIPQLINNLSNPNFSNFLNMASMAMTA 60
           MDDVFNGKNQHEPSITSLPPTLPNINYILFLLHPIPQLINNLSNPNFSNFLNMASMAMTA
Sbjct: 1   MDDVFNGKNQHEPSITSLPPTLPNINYILFLLHPIPQLINNLSNPNFSNFLNMASMAMTA 60

Query: 61  SFLPTTATKQPSATPRRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELVAAAVTVAA 120
           SFLPTTATKQPSATPRRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELVAAAVTVAA
Sbjct: 61  SFLPTTATKQPSATPRRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELVAAAVTVAA 120

Query: 121 ATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 158
           ATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK
Sbjct: 121 ATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 158

[Close]

BLAST of IVF0023410 vs. NCBI nr
Match: XP_004143237.1 (photosystem II 5 kDa protein, chloroplastic [Cucumis sativus])

HSP 1 Score: 182 bits (463), Expect = 1.28e-56
Identity = 100/106 (94.34%), Postives = 103/106 (97.17%), Query Frame = 0


Query: 53  MASMAMTASFLPTTATKQPSATPRRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELV 112
           MASMAMTASFLPTTATKQPS+T RR LIVAKASTSN+ SNVN+EVKNVKVESRQGRRELV
Sbjct: 1   MASMAMTASFLPTTATKQPSSTARRPLIVAKASTSNQASNVNMEVKNVKVESRQGRRELV 60

Query: 113 AAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 158
           AAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK
Sbjct: 61  AAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 106

[Close]

BLAST of IVF0023410 vs. NCBI nr
Match: XP_038901593.1 (photosystem II 5 kDa protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 173 bits (439), Expect = 5.78e-53
Identity = 94/106 (88.68%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 53  MASMAMTASFLPTTATKQPSATPRRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELV 112
           MASMAMTASFLP TA KQPS   RRAL+VAKASTS++ SNVNLE+KNVKVE+RQGRRELV
Sbjct: 1   MASMAMTASFLPATANKQPSTAARRALVVAKASTSSDASNVNLEIKNVKVENRQGRRELV 60

Query: 113 AAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 158
           AAAVTVAAATLAKAAMADEP RGSPEAKQKYAPICVTMPTARICRK
Sbjct: 61  AAAVTVAAATLAKAAMADEPPRGSPEAKQKYAPICVTMPTARICRK 106

[Close]

BLAST of IVF0023410 vs. NCBI nr
Match: XP_022944588.1 (photosystem II 5 kDa protein, chloroplastic [Cucurbita moschata] >XP_022986667.1 photosystem II 5 kDa protein, chloroplastic [Cucurbita maxima])

HSP 1 Score: 149 bits (375), Expect = 3.55e-43
Identity = 86/110 (78.18%), Postives = 92/110 (83.64%), Query Frame = 0


Query: 53  MASMAMTASFLPTTATKQPSATPRRALIVAKASTS----NETSNVNLEVKNVKVESRQGR 112
           MASM++TASFLP TAT+  +A  RRAL V KASTS    +  SN NLE+KNVKVES QGR
Sbjct: 1   MASMSITASFLPFTATQPSAAAARRALFVTKASTSAAATDSNSNANLEIKNVKVESSQGR 60

Query: 113 RELVAAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 158
           RELVAAAVTVAAAT AKAAMADEP RGS EAKQKYAPICVTMPTARICRK
Sbjct: 61  RELVAAAVTVAAATFAKAAMADEPPRGSAEAKQKYAPICVTMPTARICRK 110

[Close]

BLAST of IVF0023410 vs. NCBI nr
Match: KAG6570402.1 (Photosystem II 5 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010275.1 Photosystem II 5 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 145 bits (365), Expect = 1.25e-41
Identity = 89/113 (78.76%), Postives = 93/113 (82.30%), Query Frame = 0


Query: 53  MASMAMTASFLPTTATKQPSATP---RRALIVAKASTS----NETSNVNLEVKNVKVESR 112
           MASM++TASFLP TAT QPSA     RRAL V KASTS    +  SN NLE+KNVKVES 
Sbjct: 1   MASMSITASFLPFTAT-QPSAAAAAARRALFVTKASTSAAATDSNSNANLEIKNVKVESS 60

Query: 113 QGRRELVAAAVTVAAATLAKAAMADEPARGSPEAKQKYAPICVTMPTARICRK 158
           QGRRELVAAAVTVAAAT AKAAMADEP RGS EAKQKYAPICVTMPTARICRK
Sbjct: 61  QGRRELVAAAVTVAAATFAKAAMADEPPRGSAEAKQKYAPICVTMPTARICRK 112

[Close]

BLAST of IVF0023410 vs. TAIR 10
Match: AT1G51400.1 (Photosystem II 5 kD protein )

HSP 1 Score: 82.4 bits (202), Expect = 3.5e-16
Identity = 58/108 (53.70%), Postives = 73/108 (67.59%), Query Frame = 0


Query: 53  MASMAMTASFLPTTAT--KQPSATPRRALIVAKASTSNETSNVNLEVKNVKVESRQGRRE 112
           MASM MT+SFLPT +      S+  RR+L V KAS S  T+  +LE K  + +S + RR+
Sbjct: 1   MASMTMTSSFLPTVSNLPANISSNSRRSLTVVKASGSENTT--SLENKK-QEQSMKMRRD 60

Query: 113 LVAAAVTVAAATLAKAAMA-DEPARGSPEAKQKYAPICVTMPTARICR 158
           LV  A   A  +LAK AMA DEP RG+  AK+KYAP+CVTMPTA+ICR
Sbjct: 61  LVFTAAAAAVCSLAKVAMADDEPKRGTEAAKKKYAPVCVTMPTAKICR 105

[Close]

BLAST of IVF0023410 vs. TAIR 10
Match: AT3G21055.1 (photosystem II subunit T )

HSP 1 Score: 80.9 bits (198), Expect = 1.0e-15
Identity = 58/107 (54.21%), Postives = 71/107 (66.36%), Query Frame = 0


Query: 53  MASMAMTASFLPTTATKQPSATPRRALIVAKASTSNETSNVNLEVKNVKVESRQGRRELV 112
           MASM MTA+F P  A K PSAT  R L V +ASTS+ T   +LEVK  +  S   RR+L+
Sbjct: 1   MASMTMTATFFPAVA-KVPSATGGRRLSVVRASTSDNTP--SLEVK--EQSSTTMRRDLM 60

Query: 113 AAAVTVAAATLAKAAMA--DEPARGSPEAKQKYAPICVTMPTARICR 158
             A   A  +LAK AMA  +EP RG+  AK+KYA +CVTMPTA+ICR
Sbjct: 61  FTAAAAAVCSLAKVAMAEEEEPKRGTEAAKKKYAQVCVTMPTAKICR 102

The following BLAST results are available for this feature:

BLAST of IVF0023410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39195	1.4e-14	54.21	Photosystem II 5 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=P...	[more]
P31336	4.7e-13	49.06	Photosystem II 5 kDa protein, chloroplastic OS=Gossypium hirsutum OX=3635 GN=PSB...	[more]
B3EWI4	1.1e-11	45.37	Photosystem II 5 kDa protein, chloroplastic OS=Petunia hybrida OX=4102 PE=1 SV=1	[more]

BLAST of IVF0023410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TID9	8.1e-77	100.00	Photosystem II 5 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3BML8	8.1e-77	100.00	photosystem II 5 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491...	[more]
A0A0A0KIB2	6.5e-42	94.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G439930 PE=4 SV=1	[more]
A0A6J1J874	1.0e-31	78.18	photosystem II 5 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1FY72	1.0e-31	78.18	photosystem II 5 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of IVF0023410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449703.1	1.17e-102	100.00	PREDICTED: photosystem II 5 kDa protein, chloroplastic [Cucumis melo] >KAA004142...	[more]
XP_004143237.1	1.28e-56	94.34	photosystem II 5 kDa protein, chloroplastic [Cucumis sativus]	[more]
XP_038901593.1	5.78e-53	88.68	photosystem II 5 kDa protein, chloroplastic [Benincasa hispida]	[more]
XP_022944588.1	3.55e-43	78.18	photosystem II 5 kDa protein, chloroplastic [Cucurbita moschata] >XP_022986667.1...	[more]
KAG6570402.1	1.25e-41	78.76	Photosystem II 5 kDa protein, chloroplastic, partial [Cucurbita argyrosperma sub...	[more]

BLAST of IVF0023410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G51400.1	3.5e-16	53.70	Photosystem II 5 kD protein	[more]
AT3G21055.1	1.0e-15	54.21	photosystem II subunit T	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040296	Photosystem II 5kDa protein, chloroplastic	PANTHER	PTHR34940	PHOTOSYSTEM II 5 KDA PROTEIN, CHLOROPLASTIC	coord: 53..158
None	No IPR available	PANTHER	PTHR34940:SF4	PHOTOSYSTEM II 5 KDA PROTEIN, CHLOROPLASTIC	coord: 53..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023410.2	IVF0023410.2	mRNA