IVF0023332 (gene) Melon (IVF77) v1

Overview


Name	IVF0023332
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	UPF0426 protein At1g28150, chloroplastic
Location	chr12: 25441721 .. 25444155 (+)
RNA-Seq Expression	IVF0023332
Synteny	IVF0023332

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGAATTAAATCTAATGTAGAAAGAACACGATGGGCATGTGGTTGTTTTTCGAATGTTTGGTCAATTGTAAGAAGAAATGAAGGCAATTTGAAGCCATTACCTTAAATCCAACGCAAATATCATCTTCTTCTTCCATCCTTCAATCAATCACAAGCAACTCTGCTCCATTAGCATCATCAGAGATTAACCATGGCCGCTCTTCTTCTTCACTCCTCTTCTACTGCGAGCGTTCTGGTATGCCCATTTCTACTCTCTTCAATTGCTTTCGCTCTTTTCTATTATTTGCTTCTTATGTCTCTTCTCCGATGTTATCGATTTTCTTCTTTGATTCTATTGAAGTTTGGAGAAATGGGGAAATTGAAGGCACGGAGTCATCATTCCATTTTATCATCCAAGAAACCTATGCGCAGTAGCTTTCTTCGTCTCGGCTCCAACAATTCTACAAATGGCATCTCCGCATTTTTCTTCAACCCTGTTGAGGATCCTGTACTCAAAGAAGCTCTTAAGGTATCCCATTAATTCGTACATCAAGAACCCTTCCTGGGTTTTGGCTGTTGTGTTCATTCGCTTAGTTTGTTCCTGGATTAAGGTCTTGATTTCTAAGTATGTTCAAAATATGGAGGATTCAATTAATTTCCCATTCTATTCCCATAGCACTTAAAACACTAATTATCTTCAAGCAGAGTTACAAATTTGGTCTACAAGTGCGAGTTAGGATAGATGGATGCATGAATCTAAATTTTTTCTAGTCATGTCATGTTGAAAGTATTAGAACTATGTCGGACCGTTGGTATAAGAAACTCAAGCAATCATTCTATCTCTCTGATGATAACCACTGCATAATATAAGTATTGTTGAGTCAGCTTTTTTTTTATCTGCCAATAGTAACCTCGAACTAACATCAAAGGAGAAAAATTATATGCCTTTATGATCTGGAAGGTTATTTGTTCAGAAAATTGCATAAAGATGTTTATAATTTGTAAACTTTAAGCAATAGAGAACTTCGGCGGGGAGTAATGCAGACTTTAATGGAAATTTTGGCAATTTAGTATTTTCTCAACTAGAGGATATCTTTATTTGGCTTCACTTTCACAAATCCAAACCCGTTCTTCACATTATTCCTATATTGGTTACCTTACAGTAGAACCAAAATCCTAGAGGAAGAAGTTAACAAGACAGTTGTGGTATTGGTTTCTTTGTTTCCTGCTACCTCAGTGACAGAGCATTCACAGATTAATCTAAAAGTTGTATGCCACTCTAGCTACTTATCTCCGAGAAGAAACCTCTTTTAAAGTTCTACTTGATTCATAGTTTCATACCATACAAAAGACTGAAACTAAACTCATTTTCCCCTTCAATTGTGTCGGTACAGCTACACTACTTGGTAGTTATTCAAATTCTTTCCATCAATGAAATCTAAGTAGGAAATGTTCCAATGGATGCCCTCAAGATTGACGAGTCCTGTTCTGGCTGGAAGAATCCAGTATTGGTGCTTCAACACATTTAGTTCGCTGATTCTTGCCTTGTTATTAAGTAAGATTGAAAGTTTTCTAGAAAGCTTACTGTATTAGCATCTCATCTCTAAGGCTCGTCGTTGTCACCATGTTGCACTCACTTTCACACTGATATTTTTGAACTCACGATTTGGCACCAGGTTCAGTTGTGAGATACTAGACGTTTTTGGATTAATTTTTTAAGCGCTTAAACAATGCAAACAAGCCCATAGTGTTAGTTGTTTTCCAAAATTCATACTGCTATGGAGACTGCTGAAGTGAAAAGTAAACATCGTGTCATTATATCAAGTACATTTCCATAGAATTGAATCAGTCCCAATCACTTGTTGAGACTGAATGTTTTAATGTTTATTGGTTTTTCATCATTTGTAACTAAATAGGCAATCCTGGTTTCAAACTCTTGCCGATGCATTAGGATTCTTTTTTAGCATGGTTCCTTCTGAACTATATAGAATTAGATGTCGAGGCTTTAATAGCTGGGAGGTATGAATTCTTTAGATGAAAACACTCACTTTACCAACTCCAATTTTTCCATGTCTTTTGTAGTTCATAATCAGACATATCATGTCAAAGTAAAGTAATTTGAATTGTTGTAGGAGCCAGTGGCGTTTGCAGGTGGGCTATTTGCTGGACTTTTAAGGCTTGATTTGAACGAAGATCCACTAAAGGAATGGGTTAAGAAGACAGTGGAATCAGCTGGACTCACGGAGGAAGTTGATACTCAAGGATCTGTACAAGAGGATGGCCCGACCGAGATCGAGATTGAATGATCCCATCAATGGATCTAACCTGGTATAGACAATCTTATTTATTCCAATAATATAAACCGGAAAAGTGCGAATGAAATGATATTTGATTACTATTACTACAGCTCCCTTGATTTTTCCATTCTAACTTTCCTTTTTCTTGATTTAGGAGG

mRNA sequence

GTGGAATTAAATCTAATGTAGAAAGAACACGATGGGCATGTGGTTGTTTTTCGAATGTTTGGTCAATTGTAAGAAGAAATGAAGGCAATTTGAAGCCATTACCTTAAATCCAACGCAAATATCATCTTCTTCTTCCATCCTTCAATCAATCACAAGCAACTCTGCTCCATTAGCATCATCAGAGATTAACCATGGCCGCTCTTCTTCTTCACTCCTCTTCTACTGCGAGCGTTCTGTTTGGAGAAATGGGGAAATTGAAGGCACGGAGTCATCATTCCATTTTATCATCCAAGAAACCTATGCGCAGTAGCTTTCTTCGTCTCGGCTCCAACAATTCTACAAATGGCATCTCCGCATTTTTCTTCAACCCTGTTGAGGATCCTGTACTCAAAGAAGCTCTTAAGGAGCCAGTGGCGTTTGCAGGTGGGCTATTTGCTGGACTTTTAAGGCTTGATTTGAACGAAGATCCACTAAAGGAATGGGTTAAGAAGACAGTGGAATCAGCTGGACTCACGGAGGAAGTTGATACTCAAGGATCTGTACAAGAGGATGGCCCGACCGAGATCGAGATTGAATGATCCCATCAATGGATCTAACCTGGTATAGACAATCTTATTTATTCCAATAATATAAACCGGAAAAGTGCGAATGAAATGATATTTGATTACTATTACTACAGCTCCCTTGATTTTTCCATTCTAACTTTCCTTTTTCTTGATTTAGGAGG

Coding sequence (CDS)

ATGGCCGCTCTTCTTCTTCACTCCTCTTCTACTGCGAGCGTTCTGTTTGGAGAAATGGGGAAATTGAAGGCACGGAGTCATCATTCCATTTTATCATCCAAGAAACCTATGCGCAGTAGCTTTCTTCGTCTCGGCTCCAACAATTCTACAAATGGCATCTCCGCATTTTTCTTCAACCCTGTTGAGGATCCTGTACTCAAAGAAGCTCTTAAGGAGCCAGTGGCGTTTGCAGGTGGGCTATTTGCTGGACTTTTAAGGCTTGATTTGAACGAAGATCCACTAAAGGAATGGGTTAAGAAGACAGTGGAATCAGCTGGACTCACGGAGGAAGTTGATACTCAAGGATCTGTACAAGAGGATGGCCCGACCGAGATCGAGATTGAATGA

Protein sequence

MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNPVEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQEDGPTEIEIE

Homology

[Close]

BLAST of IVF0023332 vs. ExPASy Swiss-Prot
Match: Q9FZ89 (UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g28150 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.7e-19
Identity = 48/74 (64.86%), Postives = 60/74 (81.08%), Query Frame = 0


Query: 58  FNPVEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLT-EEVDTQGS 117
           FN  ++P+L EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++G+T EEVD  G 
Sbjct: 50  FNLPQEPILSEALKEPIAFLGGMFAGLLRLDLNEEPLKDWVTRTVEASGITEEEVDADGV 109

Query: 118 V--QEDGPTEIEIE 129
           V   ED P +IEIE
Sbjct: 110 VSNDEDSPQQIEIE 123

[Close]

BLAST of IVF0023332 vs. ExPASy Swiss-Prot
Match: P74786 (UPF0426 protein ssl0294 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=ssl0294 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.5e-06
Identity = 27/67 (40.30%), Postives = 44/67 (65.67%), Query Frame = 0


Query: 64  PVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTE--EVDTQGSVQEDG 123
           PV +E  ++P+AFAGG  +G+LRL L +DPLK+W++K     G+T+    D   + Q++ 
Sbjct: 8   PVTRELCQQPIAFAGGFVSGVLRLKLTDDPLKKWLQK----QGVTDFSGADINQTAQDNR 67

Query: 124 PTEIEIE 129
           P  I+I+
Sbjct: 68  PQSIDID 70

[Close]

BLAST of IVF0023332 vs. ExPASy Swiss-Prot
Match: Q8YQ06 (UPF0426 protein asl4034 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=asl4034 PE=3 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 9.3e-04
Identity = 21/65 (32.31%), Postives = 36/65 (55.38%), Query Frame = 0


Query: 64  PVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQEDGPT 123
           P+ K+ ++ P +F GG  +G+LRL+L +DP+K W+ K       +  V    + +  GP 
Sbjct: 8   PIFKQLVQHPASFLGGFASGVLRLNLADDPVKSWLDKQRGVNSYSFPVTDAHNGKASGPQ 67

Query: 124 EIEIE 129
            I I+
Sbjct: 68  SISID 72

[Close]

BLAST of IVF0023332 vs. ExPASy TrEMBL
Match: A0A5D3BGH6 (UPF0426 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00680 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 7.8e-62
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP 60
           MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP 60

Query: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQED 120
           VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQED
Sbjct: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQED 120

Query: 121 GPTEIEIE 129
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of IVF0023332 vs. ExPASy TrEMBL
Match: A0A1S3AZP7 (UPF0426 protein At1g28150, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484480 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 7.8e-62
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP 60
           MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP 60

Query: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQED 120
           VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQED
Sbjct: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQED 120

Query: 121 GPTEIEIE 129
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of IVF0023332 vs. ExPASy TrEMBL
Match: A0A0A0LT92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032470 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 8.9e-58
Identity = 121/128 (94.53%), Postives = 124/128 (96.88%), Query Frame = 0


Query: 1   MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP 60
           MAALLLHSSSTASVLFGEMGKLK R+H+SILSSKKP+RSSF RLGSNNSTNGISAFFFNP
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP 60

Query: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQED 120
           V DPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL EEVDTQGSVQED
Sbjct: 61  VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED 120

Query: 121 GPTEIEIE 129
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of IVF0023332 vs. ExPASy TrEMBL
Match: A0A6J1E8W6 (UPF0426 protein At1g28150, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431718 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 3.1e-50
Identity = 107/128 (83.59%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP 60
           MA LLLHSSSTASVL G MGK +  + HSI S KKPMR++ LRLG +NSTNGI AF FNP
Sbjct: 1   MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNP 60

Query: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQED 120
           +EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAG+TEEVDTQGSVQED
Sbjct: 61  LEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQED 120

Query: 121 GPTEIEIE 129
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of IVF0023332 vs. ExPASy TrEMBL
Match: A0A6J1KGM3 (UPF0426 protein At1g28150, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111495083 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 5.8e-49
Identity = 105/128 (82.03%), Postives = 112/128 (87.50%), Query Frame = 0


Query: 1   MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP 60
           MA LLLHSSSTA VL G MGK +  + HSI S KKPMR++ LRLG NNSTN I AF F P
Sbjct: 1   MAGLLLHSSSTACVLLGGMGKFREGNRHSIFSPKKPMRANCLRLGCNNSTNAICAFLFTP 60

Query: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQED 120
           +EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAG+TEEVDTQGSVQED
Sbjct: 61  LEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQED 120

Query: 121 GPTEIEIE 129
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of IVF0023332 vs. NCBI nr
Match: XP_008439829.1 (PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis melo] >KAA0036065.1 UPF0426 protein [Cucumis melo var. makuwa] >TYJ98872.1 UPF0426 protein [Cucumis melo var. makuwa])

HSP 1 Score: 244 bits (622), Expect = 4.61e-81
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP 60
           MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP 60

Query: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQED 120
           VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQED
Sbjct: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQED 120

Query: 121 GPTEIEIE 128
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of IVF0023332 vs. NCBI nr
Match: XP_004137400.1 (UPF0426 protein At1g28150, chloroplastic [Cucumis sativus])

HSP 1 Score: 230 bits (587), Expect = 1.00e-75
Identity = 121/128 (94.53%), Postives = 124/128 (96.88%), Query Frame = 0


Query: 1   MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP 60
           MAALLLHSSSTASVLFGEMGKLK R+H+SILSSKKP+RSSF RLGSNNSTNGISAFFFNP
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP 60

Query: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQED 120
           V DPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL EEVDTQGSVQED
Sbjct: 61  VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED 120

Query: 121 GPTEIEIE 128
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of IVF0023332 vs. NCBI nr
Match: XP_038893812.1 (UPF0426 protein At1g28150, chloroplastic [Benincasa hispida])

HSP 1 Score: 224 bits (570), Expect = 3.93e-73
Identity = 116/128 (90.62%), Postives = 120/128 (93.75%), Query Frame = 0


Query: 1   MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP 60
           MAALLLHSSS  SVLFGEMGKLK R+HHSILSS KP+R +FLRL  NN TNGISAFFFNP
Sbjct: 1   MAALLLHSSSATSVLFGEMGKLKGRNHHSILSSDKPVRGNFLRLRCNNPTNGISAFFFNP 60

Query: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQED 120
           VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEE+DTQGSVQED
Sbjct: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEIDTQGSVQED 120

Query: 121 GPTEIEIE 128
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of IVF0023332 vs. NCBI nr
Match: KGN63981.2 (hypothetical protein Csa_013804 [Cucumis sativus])

HSP 1 Score: 210 bits (534), Expect = 7.27e-66
Identity = 110/117 (94.02%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 1   MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP 60
           MAALLLHSSSTASVLFGEMGKLK R+H+SILSSKKP+RSSF RLGSNNSTNGISAFFFNP
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP 60

Query: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSV 117
           V DPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL EEVDTQGSV
Sbjct: 61  VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSV 117

[Close]

BLAST of IVF0023332 vs. NCBI nr
Match: XP_022924196.1 (UPF0426 protein At1g28150, chloroplastic [Cucurbita moschata])

HSP 1 Score: 205 bits (522), Expect = 8.17e-66
Identity = 107/128 (83.59%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP 60
           MA LLLHSSSTASVL G MGK +  + HSI S KKPMR++ LRLG +NSTNGI AF FNP
Sbjct: 1   MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNP 60

Query: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQED 120
           +EDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAG+TEEVDTQGSVQED
Sbjct: 61  LEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQED 120

Query: 121 GPTEIEIE 128
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of IVF0023332 vs. TAIR 10
Match: AT1G28150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 96 Blast hits to 96 proteins in 44 species: Archae - 0; Bacteria - 56; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 96.3 bits (238), Expect = 1.9e-20
Identity = 48/74 (64.86%), Postives = 60/74 (81.08%), Query Frame = 0


Query: 58  FNPVEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLT-EEVDTQGS 117
           FN  ++P+L EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++G+T EEVD  G 
Sbjct: 50  FNLPQEPILSEALKEPIAFLGGMFAGLLRLDLNEEPLKDWVTRTVEASGITEEEVDADGV 109

Query: 118 V--QEDGPTEIEIE 129
           V   ED P +IEIE
Sbjct: 110 VSNDEDSPQQIEIE 123

The following BLAST results are available for this feature:

BLAST of IVF0023332 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ89	2.7e-19	64.86	UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g...	[more]
P74786	1.5e-06	40.30	UPF0426 protein ssl0294 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=11117...	[more]
Q8YQ06	9.3e-04	32.31	UPF0426 protein asl4034 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) ...	[more]

BLAST of IVF0023332 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BGH6	7.8e-62	100.00	UPF0426 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G0068...	[more]
A0A1S3AZP7	7.8e-62	100.00	UPF0426 protein At1g28150, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484480...	[more]
A0A0A0LT92	8.9e-58	94.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032470 PE=4 SV=1	[more]
A0A6J1E8W6	3.1e-50	83.59	UPF0426 protein At1g28150, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1KGM3	5.8e-49	82.03	UPF0426 protein At1g28150, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]

BLAST of IVF0023332 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439829.1	4.61e-81	100.00	PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis melo] >KAA0036065.1...	[more]
XP_004137400.1	1.00e-75	94.53	UPF0426 protein At1g28150, chloroplastic [Cucumis sativus]	[more]
XP_038893812.1	3.93e-73	90.63	UPF0426 protein At1g28150, chloroplastic [Benincasa hispida]	[more]
KGN63981.2	7.27e-66	94.02	hypothetical protein Csa_013804 [Cucumis sativus]	[more]
XP_022924196.1	8.17e-66	83.59	UPF0426 protein At1g28150, chloroplastic [Cucurbita moschata]	[more]

BLAST of IVF0023332 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28150.1	1.9e-20	64.86	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..128
None	No IPR available	PANTHER	PTHR35996:SF1	OSJNBA0038O10.25 PROTEIN	coord: 1..128
IPR040278	UPF0426 protein	PANTHER	PTHR35996	OSJNBA0038O10.25 PROTEIN	coord: 1..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023332.1	IVF0023332.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043086	negative regulation of catalytic activity
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0030599	pectinesterase activity
molecular_function	GO:0046910	pectinesterase inhibitor activity