IVF0023158 (gene) Melon (IVF77) v1

Overview


Name	IVF0023158
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr03: 11815837 .. 11818939 (-)
RNA-Seq Expression	IVF0023158
Synteny	IVF0023158

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGCCGAAGGCTGTTATCCGAGTTATACGATATTTAATTCTCTTGTTCATGCTTATTGCAAATCAGATGATTTTTTATATGCTTATAAGTTGCTTAAGAAAATGGAAACATGTGAATGCAAGCCTGGCTATGTGGTTTACAACATCTTAATTGGCAGTATTTGTAGTGGTGGAGAATTACCCGGCCAGTTACATTTGAGTTGGCTGAGAAAGCTTACAATGAGATGCTTTCTGCTGGAACCGTTTTAAATAAGGTCAACGTTGTAAGCTTTGCTCGATGCCTTTGTGGCTTTGGGAAATTTGAGAAAGCTTATAAAGTAATTCATGAAATGATGGGTAATGGTTTCGTCCCTGATACTTCTACATATTCTGAAGTGATAGGTTTTCTATGTAATGCATCCAGGGTAGAAAATGCCTTTTTTCTTTTAAAGAAATGAAAGGGACTGGTGTGATTCCTGATGTTTATACATACACAATTTTAATTGATTGTTTTTCTAAAGCTGGCCTCATTAAACAAGCTCACAATTGGCTAGATGAAATGGTAAGAGATGGCTGTGAACCTACTGTGGTGACTTATACAACCCTTATCCATGCATATCTTAAGGCTAAGAAAGTTTCTGTTGCTAATGAACTTTTTGAGTTAATGATAGCCAAGGGTTGTTTTCCTAATGTCATTACTTATACAGCTTTAATTGATGGCTATTGTAAATCAGGGAATATAGAAAAAGCTTGCCAGATTTATGCAAGAATGAGAGGTGATGCAGACATTCCTGATGTAGATATGTATTTTAAAATAAAAATAATGTGGCTGAAAAGCCAAATGTTGTTACGTATGGAGCTTTGGTGGATGGTTTATGCAAGGCCCATAAAGTCAAAGATGCCCGTGACTTGTTGGAGACCATGTTTGTGGATGGTTGTGAACCAAACACCATTATATATGATGCACTAATTGATGGATTTGTAAGGCTGCAAAGTTGGACGAAGCACAAGAGGTGTTTCATAAGATGGTAGAGCGTGGGTATAATCCTAATGTCTATACTTATAGCTCTCTTATTGATAGACTATTCAAGGATAAACGTTTAGATCTTGTTTTGAAGGTGTTGTCCAAAATGTTAGAGAATTCTTGTGCTCCAAACGTTGTTATCTACACAGAGATGATTGATGGCCTTTCTAAAGTAGCAAAGACAGATGAAGCATATAAGCTTATGTTGATGATGGAAGAGAAGGGATGTAAACCAAATGTTGTGACCTACACTGCAATGATTGATGGCTTTGGAAAAGCTGGTAAAGTTGACAAATGCCTTGAGCTTTTCAGGGAAATGGGCTCAAAAGGTTGTGCTCCAAATTTTGTCACCTACACAGTGTTGATCAACCATTGTTGTGCTACTGGCCATTTAGATGAGGCTTATGCACTGTTGGAAGAAATGAAACAGACATACTGGCCAAAACATGTATCGAGCTACTGTAAAGTCATTGAAGGCTATAGACGGGAGTTCATTCTCTCGCTTGGGCTTTTAGAGGAAGTTGAGAAGAATGGTTCTGCTCCAATTATTCTTCTATATAAGGTTCTGATTGATAACTTTGTTAAGGCAGGAAGACTGGAAGTGGCACTGGAGCTCCACAAAGAGGTTATATCGGCTTCAATGTCTATGGCTGCAAAGAAAAATATGTATACAAGTTTGATTTACAGCTTTTCTCATGCAAGTAAGATTGGTCACGCATTTGAGTTATTTTATGATATGATAAGAGATGGTGTTATACCAGATCTTGGTACGTTTGTCCACCTTCTTATGGGGCTTATCAGAGTTAGAATGTGGGAAGAAGCACTTCAGCTGTCGGATAGCATATGTCAAATGGTATGTGTCTTGAGCCCTCTGATTTCTAATTGTCCAGTCAATTGTGTAATTCACCAACATCTGATTATTTTGGTCATCAAGTTTTCAATCAAACTCAAATATATGGAACCAAAGTGCTATTGTTAAGCTAAATTATGGAAAATACTCAACTTTGTACTTTGTTTAACATTACCATTAGACTTTCAAAAGTTTTACCCTTATACTTCAAAAGGAAAGTTCAAAGATACTCTTAACTCTTAATGAATGGATGGAAACTGTTAGAAAATACCACATAACTTTTTTTAAAAAATTCATTAATGTTAAAGGAAATTAGGATTTATTGGGTTTATTCTTATTTAATATTTTCCATTTTTGTACTTTTGCTTCATTAGTATTAGTATTTTGGTCCCTATTTATTCACCAATATAATAGGTTATTATGTACAATTTGGTTTATTCAATATATTGTATAAAATTATCATGGTAACAGATGTCTAGGTTTTGTTCAAACCTAGAAGGCACAATCTTGCTCTCAGTGGCGGATCTAGAAAATATATTGACGGGGGGCTAAAAGAAAAATATGAAAAATAAACTACATAGGTAGGATTTGAACCTGGGTGGGAAGGGGGGCTGACAGTCAAAATAACCAATAAGCTAATGATAAATATTAATAATTAAGTAGTTTTCTTTATATATATTATATAAAGACTATAAAGTTGAGGGGGGGGGGGGGGGGAGGTTTGAGCCCCCTGGGCCTATGCTAAATCCGTCGGTGCTTGCTCTTATTGAACCCTAGCCGCCACAAGTTTGTTCAACCTTTTTATTTATCGATTTGACTAGTCATCAACGGAAGCAGACCCACTTGTAGATTCGACCCCTCATTAGCCTATGTCCAATTCGTGTGCCTAGACCACCCTAGATCCACTCTGTTCAGATCCTTCATCACTTGCTGTCTCGCCCCGTCAACAACCGCAATCATGGGCCACCGTCATACCCACCACACATTGCCTCCTTGATTTGCGCTACCTTGATTTGCGTCGATCTGGTGCTTTTTTGTCGGCGTCTCGTTCCATTCACACTTAGTGATCATGGTACCATCCATTTGGGTTTAAGATTTAACTTTTAGGGTATTTTCAGTGAAGTTTCAGATCCAGTTCATTAAACTTGTTTAGCTGTTTGGTTTAGCTCATTTGGTCCAGTTTTCCGATTGGTTCAGTCAACCTAAACTGGTTGGTTGGTTTGATCAATCCAGCTCGTTCGATATAA

mRNA sequence

ATGATTGCCGAAGGCTGTTATCCGAGTTATACGATATTTAATTCTCTTGTTCATGCTTATTGCAAATCAGATGATTTTTTATATGCTTATAAGTTGCTTAAGAAAATGGAAACATGTGAATGCAAGCCTGGCTATGTGGTTTACAACATCTTAATTGGCATTACATTTGAGTTGGCTGAGAAAGCTTACAATGAGATGCTTTCTGCTGGAACCGTTTTAAATAAGGTCAACGTTGTAAGCTTTGCTCGATGCCTTTGTGGCTTTGGGAAATTTGAGAAAGCTTATAAAGTAATTCATGAAATGATGGGTAATGGTTTCGTCCCTGATACTTCTACATATTCTGAAGGTAGAAAATGCCTTTTTTCTTTTAAAGAAATGAAAGGGACTGGTGTGATTCCTGATGTTTATACATACACAATTTTAATTGATTGTTTTTCTAAAGCTGGCCTCATTAAACAAGCTCACAATTGGCTAGATGAAATGGTAAGAGATGGCTGTGAACCTACTGTGGTGACTTATACAACCCTTATCCATGCATATCTTAAGGCTAAGAAAGTTTCTGTTGCTAATGAACTTTTTGAGTTAATGATAGCCAAGGGTTGTTTTCCTAATGTCATTACTTATACAGCTTTAATTGATGGCTATTGTAAATCAGGGAATATAGAAAAAGCTTGCCAGATTTATGCAAGAATGAGAGGTGATGCAGACATTCCTGATCCAAATGTTGTTACGTATGGAGCTTTGGTGGATGGTTTATGCAAGGCCCATAAAGTCAAAGATGCCCGTGACTTGTTGGAGACCATGTTTGTGGATGGTTGTGAACCAAACACCATTATATATGATGCACTAATTGATGGATTTGTGTTTCATAAGATGGTAGAGCGTGGGTATAATCCTAATGTCTATACTTATAGCTCTCTTATTGATAGACTATTCAAGGATAAACGTTTAGATCTTGTTTTGAAGGTGTTGTCCAAAATGTTAGAGAATTCTTGTGCTCCAAACGTTGTTATCTACACAGAGATGATTGATGGCCTTTCTAAAGTAGCAAAGACAGATGAAGCATATAAGCTTATGTTGATGATGGAAGAGAAGGGATGTAAACCAAATGTTGTGACCTACACTGCAATGATTGATGGCTTTGGAAAAGCTGGTAAAGTTGACAAATGCCTTGAGCTTTTCAGGGAAATGGGCTCAAAAGGTTGTGCTCCAAATTTTGTCACCTACACAGTGTTGATCAACCATTGTTGTGCTACTGGCCATTTAGATGAGGCTTATGCACTGTTGGAAGAAATGAAACAGACATACTGGCCAAAACATGTATCGAGCTACTGTAAAGTCATTGAAGGCTATAGACGGGAGTTCATTCTCTCGCTTGGGCTTTTAGAGGAAGTTGAGAAGAATGGTTCTGCTCCAATTATTCTTCTATATAAGGTTCTGATTGATAACTTTGTTAAGGCAGGAAGACTGGAAGTGGCACTGGAGCTCCACAAAGAGGTTATATCGGCTTCAATGTCTATGGCTGCAAAGAAAAATATGTATACAAGTTTGATTTACAGCTTTTCTCATGCAAGTAAGATTGGTCACGCATTTGAGTTATTTTATGATATGATAAGAGATGGTGTTATACCAGATCTTGGTACGTTTGTCCACCTTCTTATGGGGCTTATCAGAGTTAGAATGTGGGAAGAAGCACTTCAGCTGTCGGATAGCATATGTCAAATGGTATTCAACCTAAACTGGTTGGTTGGTTTGATCAATCCAGCTCGTTCGATATAA

Coding sequence (CDS)

ATGATTGCCGAAGGCTGTTATCCGAGTTATACGATATTTAATTCTCTTGTTCATGCTTATTGCAAATCAGATGATTTTTTATATGCTTATAAGTTGCTTAAGAAAATGGAAACATGTGAATGCAAGCCTGGCTATGTGGTTTACAACATCTTAATTGGCATTACATTTGAGTTGGCTGAGAAAGCTTACAATGAGATGCTTTCTGCTGGAACCGTTTTAAATAAGGTCAACGTTGTAAGCTTTGCTCGATGCCTTTGTGGCTTTGGGAAATTTGAGAAAGCTTATAAAGTAATTCATGAAATGATGGGTAATGGTTTCGTCCCTGATACTTCTACATATTCTGAAGGTAGAAAATGCCTTTTTTCTTTTAAAGAAATGAAAGGGACTGGTGTGATTCCTGATGTTTATACATACACAATTTTAATTGATTGTTTTTCTAAAGCTGGCCTCATTAAACAAGCTCACAATTGGCTAGATGAAATGGTAAGAGATGGCTGTGAACCTACTGTGGTGACTTATACAACCCTTATCCATGCATATCTTAAGGCTAAGAAAGTTTCTGTTGCTAATGAACTTTTTGAGTTAATGATAGCCAAGGGTTGTTTTCCTAATGTCATTACTTATACAGCTTTAATTGATGGCTATTGTAAATCAGGGAATATAGAAAAAGCTTGCCAGATTTATGCAAGAATGAGAGGTGATGCAGACATTCCTGATCCAAATGTTGTTACGTATGGAGCTTTGGTGGATGGTTTATGCAAGGCCCATAAAGTCAAAGATGCCCGTGACTTGTTGGAGACCATGTTTGTGGATGGTTGTGAACCAAACACCATTATATATGATGCACTAATTGATGGATTTGTGTTTCATAAGATGGTAGAGCGTGGGTATAATCCTAATGTCTATACTTATAGCTCTCTTATTGATAGACTATTCAAGGATAAACGTTTAGATCTTGTTTTGAAGGTGTTGTCCAAAATGTTAGAGAATTCTTGTGCTCCAAACGTTGTTATCTACACAGAGATGATTGATGGCCTTTCTAAAGTAGCAAAGACAGATGAAGCATATAAGCTTATGTTGATGATGGAAGAGAAGGGATGTAAACCAAATGTTGTGACCTACACTGCAATGATTGATGGCTTTGGAAAAGCTGGTAAAGTTGACAAATGCCTTGAGCTTTTCAGGGAAATGGGCTCAAAAGGTTGTGCTCCAAATTTTGTCACCTACACAGTGTTGATCAACCATTGTTGTGCTACTGGCCATTTAGATGAGGCTTATGCACTGTTGGAAGAAATGAAACAGACATACTGGCCAAAACATGTATCGAGCTACTGTAAAGTCATTGAAGGCTATAGACGGGAGTTCATTCTCTCGCTTGGGCTTTTAGAGGAAGTTGAGAAGAATGGTTCTGCTCCAATTATTCTTCTATATAAGGTTCTGATTGATAACTTTGTTAAGGCAGGAAGACTGGAAGTGGCACTGGAGCTCCACAAAGAGGTTATATCGGCTTCAATGTCTATGGCTGCAAAGAAAAATATGTATACAAGTTTGATTTACAGCTTTTCTCATGCAAGTAAGATTGGTCACGCATTTGAGTTATTTTATGATATGATAAGAGATGGTGTTATACCAGATCTTGGTACGTTTGTCCACCTTCTTATGGGGCTTATCAGAGTTAGAATGTGGGAAGAAGCACTTCAGCTGTCGGATAGCATATGTCAAATGGTATTCAACCTAAACTGGTTGGTTGGTTTGATCAATCCAGCTCGTTCGATATAA

Protein sequence

MIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIGITFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEGRKCLFSFKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIIYDALIDGFVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRMWEEALQLSDSICQMVFNLNWLVGLINPARSI

Homology

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BLAST of IVF0023158 vs. ExPASy Swiss-Prot
Match: Q9M9X9 (Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g06710 PE=3 SV=1)

HSP 1 Score: 722.6 bits (1864), Expect = 3.6e-207
Identity = 369/622 (59.32%), Postives = 445/622 (71.54%), Query Frame = 0


Query: 1   MIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIGI------ 60
           M+ EGCYPS  IFNSLVHAYC S D  YAYKLLKKM  C   PGYVVYNILIG       
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422

Query: 61  -----TFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
                  +LAEKAY+EML+AG VLNK+NV SF RCLC  GK+EKA+ VI EM+G GF+PD
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482

Query: 121 TSTYSEGRKCLFS----------FKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLD 180
           TSTYS+    L +          F+EMK  G++ DVYTYTI++D F KAGLI+QA  W +
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 542

Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
           EM   GC P VVTYT LIHAYLKAKKVS ANELFE M+++GC PN++TY+ALIDG+CK+G
Sbjct: 543 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAG 602

Query: 241 NIEKACQIYARMRGDADIPD--------------PNVVTYGALVDGLCKAHKVKDARDLL 300
            +EKACQI+ RM G  D+PD              PNVVTYGAL+DG CK+H+V++AR LL
Sbjct: 603 QVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLL 662

Query: 301 ETMFVDGCEPNTIIYDALIDGF-----------VFHKMVERGYNPNVYTYSSLIDRLFKD 360
           + M ++GCEPN I+YDALIDG            V  +M E G+   +YTYSSLIDR FK 
Sbjct: 663 DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKV 722

Query: 361 KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
           KR DL  KVLSKMLENSCAPNVVIYTEMIDGL KV KTDEAYKLM MMEEKGC+PNVVTY
Sbjct: 723 KRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTY 782

Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
           TAMIDGFG  GK++ CLEL   MGSKG APN+VTY VLI+HCC  G LD A+ LLEEMKQ
Sbjct: 783 TAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842

Query: 481 TYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
           T+WP H + Y KVIEG+ +EFI SLGLL+E+ ++ +AP + +Y++LIDN +KA RLE+AL
Sbjct: 843 THWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMAL 902

Query: 541 ELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 577
            L +EV + S ++    + Y SLI S   A+K+  AF+LF +M + GVIP++ +F  L+ 
Sbjct: 903 RLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIK 962

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BLAST of IVF0023158 vs. ExPASy Swiss-Prot
Match: Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.8e-63
Identity = 187/572 (32.69%), Postives = 273/572 (47.73%), Query Frame = 0


Query: 25  DFLYAYKLLKKM---ETCECKPGYVV--YNILI------GITFELAEKAYNEMLSAGTVL 84
           D LY   L +KM   E  E K   ++  YN L+      G+  E+ ++ Y EML      
Sbjct: 158 DALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEM-KQVYMEMLEDKVCP 217

Query: 85  NKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSE------GRKCLFS----F 144
           N           C  G  E+A + + +++  G  PD  TY+        RK L S    F
Sbjct: 218 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF 277

Query: 145 KEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKA 204
            EM   G   +   YT LI     A  I +A +   +M  D C PTV TYT LI +   +
Sbjct: 278 NEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS 337

Query: 205 KKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDPNVV 264
           ++ S A  L + M   G  PN+ TYT LID  C     EKA ++  +M     +  PNV+
Sbjct: 338 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLM--PNVI 397

Query: 265 TYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIIYDALIDGF----------VFHKMV 324
           TY AL++G CK   ++DA D++E M      PNT  Y+ LI G+          V +KM+
Sbjct: 398 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKML 457

Query: 325 ERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTD 384
           ER   P+V TY+SLID   +    D   ++LS M +    P+   YT MID L K  + +
Sbjct: 458 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 517

Query: 385 EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLI 444
           EA  L   +E+KG  PNVV YTA+IDG+ KAGKVD+   +  +M SK C PN +T+  LI
Sbjct: 518 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 577

Query: 445 NHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYRR--EFILSLGLLEEVEKNGSA 504
           +  CA G L EA  L E+M +      VS+   +I    +  +F  +    +++  +G+ 
Sbjct: 578 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 637

Query: 505 PIILLYKVLIDNFVKAGRLEVALELHKEVISASM---SMAAKKNMYTSLIYSFSHASKIG 561
           P    Y   I  + + GRL     L  E + A M    ++     Y+SLI  +    +  
Sbjct: 638 PDAHTYTTFIQTYCREGRL-----LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 697

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BLAST of IVF0023158 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.4e-62
Identity = 140/445 (31.46%), Postives = 240/445 (53.93%), Query Frame = 0


Query: 138 YTILIDCFSKAGLIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKK-VSVANELFELM 197
           + +++  +S+  LI +A + +      G  P V++Y  ++ A +++K+ +S A  +F+ M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 198 IAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDPNVVTYGALVDGLCKAH 257
           +     PNV TY  LI G+C +GNI+ A  ++ +M     +  PNVVTY  L+DG CK  
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCL--PNVVTYNTLIDGYCKLR 256

Query: 258 KVKDARDLLETMFVDGCEPNTIIYDALIDG-----------FVFHKMVERGYNPNVYTYS 317
           K+ D   LL +M + G EPN I Y+ +I+G           FV  +M  RGY+ +  TY+
Sbjct: 257 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 316

Query: 318 SLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEK 377
           +LI    K+      L + ++ML +   P+V+ YT +I  + K    + A + +  M  +
Sbjct: 317 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 376

Query: 378 GCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEA 437
           G  PN  TYT ++DGF + G +++   + REM   G +P+ VTY  LIN  C TG +++A
Sbjct: 377 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 436

Query: 438 YALLEEMKQTYWPKHVSSYCKVIEGYRREFIL--SLGLLEEVEKNGSAPIILLYKVLIDN 497
            A+LE+MK+      V SY  V+ G+ R + +  +L +  E+ + G  P  + Y  LI  
Sbjct: 437 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 496

Query: 498 FVKAGRLEVALELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVI 557
           F +  R + A +L++E++   + +   +  YT+LI ++     +  A +L  +M+  GV+
Sbjct: 497 FCEQRRTKEACDLYEEML--RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 556

Query: 558 PDLGTFVHLLMGLIRVRMWEEALQL 569
           PD+ T+  L+ GL +     EA +L
Sbjct: 557 PDVVTYSVLINGLNKQSRTREAKRL 577

[Close]

BLAST of IVF0023158 vs. ExPASy Swiss-Prot
Match: Q9M907 (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX=3702 GN=At3g06920 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.0e-61
Identity = 163/594 (27.44%), Postives = 274/594 (46.13%), Query Frame = 0


Query: 5   GCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIGI-----TFELA 64
           G  P+  +F +L+  + K      A  LL +M++       V+YN+ I         ++A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257

Query: 65  EKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTY------ 124
            K ++E+ + G   ++V   S    LC   + ++A ++   +  N  VP T  Y      
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317

Query: 125 --SEGR--KCLFSFKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLDEMVRDGCEPT 184
             S G+  +     +  +  G IP V  Y  ++ C  K G + +A    +EM +D   P 
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PN 377

Query: 185 VVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYA 244
           + TY  LI    +A K+  A EL + M   G FPNV T   ++D  CKS  +++AC ++ 
Sbjct: 378 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 437

Query: 245 RMRGDADIPDPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIIYDALIDGF-- 304
            M  D  +  P+ +T+ +L+DGL K  +V DA  + E M    C  N+I+Y +LI  F  
Sbjct: 438 EM--DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFN 497

Query: 305 ---------VFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVI 364
                    ++  M+ +  +P++   ++ +D +FK    +    +  ++      P+   
Sbjct: 498 HGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARS 557

Query: 365 YTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMG 424
           Y+ +I GL K    +E Y+L   M+E+GC  +   Y  +IDGF K GKV+K  +L  EM 
Sbjct: 558 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 617

Query: 425 SKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYRREFILS 484
           +KG  P  VTY  +I+       LDEAY L EE K      +V  Y  +I+G+ +   + 
Sbjct: 618 TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRID 677

Query: 485 LG--LLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTS 544
               +LEE+ + G  P +  +  L+D  VKA  +  AL   + +    +     +  Y  
Sbjct: 678 EAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM--KELKCTPNQVTYGI 737

Query: 545 LIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRMWEEALQLSD 571
           LI       K   AF  + +M + G+ P   ++  ++ GL +     EA  L D
Sbjct: 738 LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786

[Close]

BLAST of IVF0023158 vs. ExPASy Swiss-Prot
Match: Q9CAN5 (Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g63080 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.0e-61
Identity = 164/539 (30.43%), Postives = 261/539 (48.42%), Query Frame = 0


Query: 49  NILIGITFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVI---HEMMGNG 108
           N L+ +  + A   + EM+ +       ++V F++ L    K +K   VI    +M   G
Sbjct: 39  NALLHLKLDEAVDLFGEMVKSRPF---PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILG 98

Query: 109 FVPDTSTYSEGRKCL-----FSFK-----EMKGTGVIPDVYTYTILIDCFSKAGLIKQAH 168
              +  TY+    CL      SF      +M   G  P + T   L++ F     I +A 
Sbjct: 99  VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 158

Query: 169 NWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGY 228
             +D+MV  G +P  VT+TTL+H   +  K S A  L E M+ KGC P+++TY A+I+G 
Sbjct: 159 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 218

Query: 229 CKSGNIEKACQIYARMRGDADIPDPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEP 288
           CK G  + A  +  +M  +    + +VV Y  ++D LCK   V DA +L   M   G  P
Sbjct: 219 CKRGEPDLALNLLNKM--EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 278

Query: 289 NTIIYDALID-----------GFVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVL 348
           +   Y +LI              +   M+ER  NPNV T++SLID   K+ +L    K+ 
Sbjct: 279 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 338

Query: 349 SKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKA 408
            +M++ S  PN+V Y  +I+G     + DEA ++  +M  K C P+VVTY  +I+GF KA
Sbjct: 339 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 398

Query: 409 GKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSY 468
            KV   +ELFR+M  +G   N VTYT LI+        D A  + ++M       ++ +Y
Sbjct: 399 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 458

Query: 469 CKVIEGYRREFIL--SLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVIS 528
             +++G  +   L  ++ + E ++K+   P I  Y ++ +   KAG++E   +L      
Sbjct: 459 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF----- 518

Query: 529 ASMSMAAKKN---MYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIR 559
            S+S+   K     Y ++I  F        A+ LF  M  DG +PD GT+  L+   +R
Sbjct: 519 CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567

[Close]

BLAST of IVF0023158 vs. ExPASy TrEMBL
Match: A0A1S3BE59 (pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103488647 PE=4 SV=1)

HSP 1 Score: 1132.9 bits (2929), Expect = 0.0e+00
Identity = 573/628 (91.24%), Postives = 576/628 (91.72%), Query Frame = 0


Query: 1   MIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIG------- 60
           MIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIG       
Sbjct: 369 MIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIGSICSGGE 428

Query: 61  ----ITFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
               +TFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD
Sbjct: 429 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 488

Query: 121 TSTYSE--GRKC--------LFSFKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLD 180
           TSTYSE  G  C         F FKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLD
Sbjct: 489 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLD 548

Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
           EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG
Sbjct: 549 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 608

Query: 241 NIEKACQIYARMRGDADIPD--------------PNVVTYGALVDGLCKAHKVKDARDLL 300
           NIEKACQIYARMRGDADIPD              PNVVTYGALVDGLCKAHKVKDARDLL
Sbjct: 609 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 668

Query: 301 ETMFVDGCEPNTIIYDALIDGF-----------VFHKMVERGYNPNVYTYSSLIDRLFKD 360
           ETMFVDGCEPNTIIYDALIDGF           VFHKMVERGYNPNVYTYSSLIDRLFKD
Sbjct: 669 ETMFVDGCEPNTIIYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKD 728

Query: 361 KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
           KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY
Sbjct: 729 KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 788

Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
           TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ
Sbjct: 789 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 848

Query: 481 TYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
           TYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL
Sbjct: 849 TYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 908

Query: 541 ELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 583
           ELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLM
Sbjct: 909 ELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 968

[Close]

BLAST of IVF0023158 vs. ExPASy TrEMBL
Match: A0A5A7V4K9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold381G00700 PE=4 SV=1)

HSP 1 Score: 1128.6 bits (2918), Expect = 0.0e+00
Identity = 570/621 (91.79%), Postives = 571/621 (91.95%), Query Frame = 0


Query: 1   MIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIG------- 60
           MIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIG       
Sbjct: 369 MIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIGSICSGGE 428

Query: 61  ----ITFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
               +TFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD
Sbjct: 429 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 488

Query: 121 TSTYSE--GRKC--------LFSFKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLD 180
           TSTYSE  G  C         F FKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLD
Sbjct: 489 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLD 548

Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
           EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG
Sbjct: 549 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 608

Query: 241 NIEKACQIYARMRGDADIPD--------------PNVVTYGALVDGLCKAHKVKDARDLL 300
           NIEKACQIYARMRGDADIPD              PNVVTYGALVDGLCKAHKVKDARDLL
Sbjct: 609 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 668

Query: 301 ETMFVDGCEPNTIIYDALIDGF-----------VFHKMVERGYNPNVYTYSSLIDRLFKD 360
           ETMFVDGCEPNTIIYDALIDGF           VFHKMVERGYNPNVYTYSSLIDRLFKD
Sbjct: 669 ETMFVDGCEPNTIIYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKD 728

Query: 361 KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
           KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY
Sbjct: 729 KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 788

Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
           TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ
Sbjct: 789 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 848

Query: 481 TYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
           TYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL
Sbjct: 849 TYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 908

Query: 541 ELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 576
           ELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLM
Sbjct: 909 ELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 968

[Close]

BLAST of IVF0023158 vs. ExPASy TrEMBL
Match: A0A0A0KDY8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G041170 PE=4 SV=1)

HSP 1 Score: 1116.7 bits (2887), Expect = 0.0e+00
Identity = 561/628 (89.33%), Postives = 572/628 (91.08%), Query Frame = 0


Query: 1   MIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIG------- 60
           MIAEGCYPSYTIFNSLVHAYCKSDDF YAYKLLKKME CECKPGYVVYNILIG       
Sbjct: 1   MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 60

Query: 61  ----ITFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
               +TFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD
Sbjct: 61  LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120

Query: 121 TSTYSE--GRKC--------LFSFKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLD 180
           TSTYSE  G  C         F FKEMKGTGV+PDVYTYTILIDCFSKAG+IKQAHNWLD
Sbjct: 121 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 180

Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
           EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG
Sbjct: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240

Query: 241 NIEKACQIYARMRGDADIPD--------------PNVVTYGALVDGLCKAHKVKDARDLL 300
           NIEKACQIYARMRGDADIPD              PNVVTYGALVDGLCKAHKVKDARDLL
Sbjct: 241 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 300

Query: 301 ETMFVDGCEPNTIIYDALIDGF-----------VFHKMVERGYNPNVYTYSSLIDRLFKD 360
           ETMFVDGCEPNTI+YDALIDGF           VFHKMVE GYNPNVYTYSSLIDRLFKD
Sbjct: 301 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 360

Query: 361 KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
           KRLDLVLKVLSKMLENSCAPN+VIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY
Sbjct: 361 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420

Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
           TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ
Sbjct: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480

Query: 481 TYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
           TYWPKHVSSYCKVIEGY+REFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL
Sbjct: 481 TYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540

Query: 541 ELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 583
           ELHKEVISASMSMAAKKN+YTSLIYSFS+ASKIGHAFELFYDMIRDGVIPDLGTFVHLLM
Sbjct: 541 ELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 600

[Close]

BLAST of IVF0023158 vs. ExPASy TrEMBL
Match: A0A6J1DAP3 (pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111018584 PE=4 SV=1)

HSP 1 Score: 1051.6 bits (2718), Expect = 1.2e-303
Identity = 527/628 (83.92%), Postives = 554/628 (88.22%), Query Frame = 0


Query: 1    MIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIG------- 60
            MIAEGC+PSY IFNSLVHAYC+S DF YAYKLLKKME C CKPGYVVYNILIG       
Sbjct: 385  MIAEGCFPSYRIFNSLVHAYCRSGDFSYAYKLLKKMENCGCKPGYVVYNILIGGICGSEE 444

Query: 61   ----ITFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
                +TFELAEKAYNEMLSAGTVLNKVNVV+FARCLCGFGKFEKAYKVIHEMM NGF+PD
Sbjct: 445  LPGPVTFELAEKAYNEMLSAGTVLNKVNVVNFARCLCGFGKFEKAYKVIHEMMDNGFIPD 504

Query: 121  TSTYSE--GRKCLFS--------FKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLD 180
            TSTYSE  G  C  S        FKEMKGTGV+PDVYTYTILIDCFSKAGLIKQAHNWLD
Sbjct: 505  TSTYSEVIGFLCNASRVENAFLLFKEMKGTGVVPDVYTYTILIDCFSKAGLIKQAHNWLD 564

Query: 181  EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
            EMVRDGCEPTVVTYTTLIHAYLKAKKVS+ANELFELM+AKGC PNVITYTALIDGYCKSG
Sbjct: 565  EMVRDGCEPTVVTYTTLIHAYLKAKKVSIANELFELMLAKGCIPNVITYTALIDGYCKSG 624

Query: 241  NIEKACQIYARMRGDADIPD--------------PNVVTYGALVDGLCKAHKVKDARDLL 300
            NIEKACQIY+RMRGD DIPD              PNVVT+GALVDGLCKAHKVKDAR+LL
Sbjct: 625  NIEKACQIYSRMRGDEDIPDVDMYFKTENNVSEKPNVVTFGALVDGLCKAHKVKDARNLL 684

Query: 301  ETMFVDGCEPNTIIYDALIDGF-----------VFHKMVERGYNPNVYTYSSLIDRLFKD 360
            ETMF++GCEPN I+YDALIDGF           VF KMVERGYNPNVYTYSSLIDRLFKD
Sbjct: 685  ETMFLEGCEPNNIVYDALIDGFCKAAKLDEAQEVFAKMVERGYNPNVYTYSSLIDRLFKD 744

Query: 361  KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
            KRLD VLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY
Sbjct: 745  KRLDFVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 804

Query: 421  TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
            TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATG LDEAYALL+EMKQ
Sbjct: 805  TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGFLDEAYALLDEMKQ 864

Query: 481  TYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
            TYWPKH+SSYCKVIEGY REFILSLGLLEE EKN SAPIILLY+VLIDNF+KAGRLEVAL
Sbjct: 865  TYWPKHISSYCKVIEGYNREFILSLGLLEEAEKNDSAPIILLYRVLIDNFIKAGRLEVAL 924

Query: 541  ELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 583
            +LHKEVISASMSMAAKKNMYTSLI+SFS+A+KIGHAFELF DMIR G IPDLGTFVHL+ 
Sbjct: 925  KLHKEVISASMSMAAKKNMYTSLIHSFSNATKIGHAFELFNDMIRQGAIPDLGTFVHLIT 984

[Close]

BLAST of IVF0023158 vs. ExPASy TrEMBL
Match: A0A6J1EVK3 (pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111436368 PE=4 SV=1)

HSP 1 Score: 1047.7 bits (2708), Expect = 1.8e-302
Identity = 528/628 (84.08%), Postives = 552/628 (87.90%), Query Frame = 0


Query: 1    MIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIG------- 60
            MIAEGC+PSYTIFNSLVHAYCKS DF YAYKLLKKME CECKPGYVVYNI IG       
Sbjct: 384  MIAEGCFPSYTIFNSLVHAYCKSGDFSYAYKLLKKMEKCECKPGYVVYNIFIGGICNGKE 443

Query: 61   ----ITFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
                ITFELAEKAYNEM S+GTVLNKVNVVSFARCLCGFGKFE+AYKVIHEMMGNGF+PD
Sbjct: 444  LPGPITFELAEKAYNEMCSSGTVLNKVNVVSFARCLCGFGKFEEAYKVIHEMMGNGFIPD 503

Query: 121  TSTYSE--GRKCLFS--------FKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLD 180
             STYSE  G  C  S        FKEMKG G++PDVYTYTILIDCFSKAGLI+QAHNWLD
Sbjct: 504  RSTYSEVIGFMCNASRVENAFLLFKEMKGAGMVPDVYTYTILIDCFSKAGLIQQAHNWLD 563

Query: 181  EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
            EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFE+MIAKGC PNVITYTALIDGYCKSG
Sbjct: 564  EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEVMIAKGCIPNVITYTALIDGYCKSG 623

Query: 241  NIEKACQIYARMRGDADIPD--------------PNVVTYGALVDGLCKAHKVKDARDLL 300
            NIEKACQIYARMRGDADIPD              PNVVTYGALVDGLCKAHKVKDA DLL
Sbjct: 624  NIEKACQIYARMRGDADIPDVDMYFKTENNVSEKPNVVTYGALVDGLCKAHKVKDACDLL 683

Query: 301  ETMFVDGCEPNTIIYDALIDGF-----------VFHKMVERGYNPNVYTYSSLIDRLFKD 360
            ETMF++GCEPN I+YDALIDGF           VF KMVERGYNPNVYTYSSLIDRLFKD
Sbjct: 684  ETMFLEGCEPNNIVYDALIDGFCKAAKLDEAQEVFVKMVERGYNPNVYTYSSLIDRLFKD 743

Query: 361  KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
            KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGL KVAKTDEAYKLMLMMEEKGCKPNVVTY
Sbjct: 744  KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLCKVAKTDEAYKLMLMMEEKGCKPNVVTY 803

Query: 421  TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
            TAMIDGFGKAGKVDKCLELFREMGSKGC+PNFVTYTVLINHCCA+G LDEAYALL+EMKQ
Sbjct: 804  TAMIDGFGKAGKVDKCLELFREMGSKGCSPNFVTYTVLINHCCASGRLDEAYALLDEMKQ 863

Query: 481  TYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
            TYWPKHVSSYCKV+EGY REFILSLGLLEEVEKN + PIILLY+VLIDNFVKAGRLEVAL
Sbjct: 864  TYWPKHVSSYCKVVEGYNREFILSLGLLEEVEKNDATPIILLYRVLIDNFVKAGRLEVAL 923

Query: 541  ELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 583
            ELHKEVISASMSMAAKKNMYT+LIYSFS A KI  AFEL+ DMIR GVIPDLGTFV L+M
Sbjct: 924  ELHKEVISASMSMAAKKNMYTTLIYSFSTAMKIDQAFELYNDMIRQGVIPDLGTFVDLIM 983

[Close]

BLAST of IVF0023158 vs. NCBI nr
Match: XP_008445686.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucumis melo] >XP_008445687.1 PREDICTED: pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucumis melo] >XP_016900132.1 PREDICTED: pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucumis melo])

HSP 1 Score: 1125 bits (2911), Expect = 0.0
Identity = 573/628 (91.24%), Postives = 576/628 (91.72%), Query Frame = 0


Query: 1   MIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIG------- 60
           MIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIG       
Sbjct: 369 MIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIGSICSGGE 428

Query: 61  ----ITFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
               +TFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD
Sbjct: 429 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 488

Query: 121 TSTYSE--GRKC--------LFSFKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLD 180
           TSTYSE  G  C         F FKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLD
Sbjct: 489 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLD 548

Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
           EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG
Sbjct: 549 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 608

Query: 241 NIEKACQIYARMRGDADIPD--------------PNVVTYGALVDGLCKAHKVKDARDLL 300
           NIEKACQIYARMRGDADIPD              PNVVTYGALVDGLCKAHKVKDARDLL
Sbjct: 609 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 668

Query: 301 ETMFVDGCEPNTIIYDALIDGF-----------VFHKMVERGYNPNVYTYSSLIDRLFKD 360
           ETMFVDGCEPNTIIYDALIDGF           VFHKMVERGYNPNVYTYSSLIDRLFKD
Sbjct: 669 ETMFVDGCEPNTIIYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKD 728

Query: 361 KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
           KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY
Sbjct: 729 KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 788

Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
           TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ
Sbjct: 789 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 848

Query: 481 TYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
           TYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL
Sbjct: 849 TYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 908

Query: 541 ELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 582
           ELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLM
Sbjct: 909 ELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 968

[Close]

BLAST of IVF0023158 vs. NCBI nr
Match: KAA0063182.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1122 bits (2901), Expect = 0.0
Identity = 570/621 (91.79%), Postives = 571/621 (91.95%), Query Frame = 0


Query: 1   MIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIG------- 60
           MIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIG       
Sbjct: 369 MIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIGSICSGGE 428

Query: 61  ----ITFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
               +TFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD
Sbjct: 429 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 488

Query: 121 TSTYSE--GRKC--------LFSFKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLD 180
           TSTYSE  G  C         F FKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLD
Sbjct: 489 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLD 548

Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
           EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG
Sbjct: 549 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 608

Query: 241 NIEKACQIYARMRGDADIPD--------------PNVVTYGALVDGLCKAHKVKDARDLL 300
           NIEKACQIYARMRGDADIPD              PNVVTYGALVDGLCKAHKVKDARDLL
Sbjct: 609 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 668

Query: 301 ETMFVDGCEPNTIIYDALIDGF-----------VFHKMVERGYNPNVYTYSSLIDRLFKD 360
           ETMFVDGCEPNTIIYDALIDGF           VFHKMVERGYNPNVYTYSSLIDRLFKD
Sbjct: 669 ETMFVDGCEPNTIIYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKD 728

Query: 361 KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
           KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY
Sbjct: 729 KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 788

Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
           TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ
Sbjct: 789 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 848

Query: 481 TYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
           TYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL
Sbjct: 849 TYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 908

Query: 541 ELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 575
           ELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLM
Sbjct: 909 ELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 968

[Close]

BLAST of IVF0023158 vs. NCBI nr
Match: XP_004140980.1 (pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucumis sativus] >KAE8646617.1 hypothetical protein Csa_005076 [Cucumis sativus])

HSP 1 Score: 1109 bits (2869), Expect = 0.0
Identity = 561/628 (89.33%), Postives = 572/628 (91.08%), Query Frame = 0


Query: 1   MIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIG------- 60
           MIAEGCYPSYTIFNSLVHAYCKSDDF YAYKLLKKME CECKPGYVVYNILIG       
Sbjct: 369 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGE 428

Query: 61  ----ITFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
               +TFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD
Sbjct: 429 LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 488

Query: 121 TSTYSE--GRKC--------LFSFKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLD 180
           TSTYSE  G  C         F FKEMKGTGV+PDVYTYTILIDCFSKAG+IKQAHNWLD
Sbjct: 489 TSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLD 548

Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
           EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG
Sbjct: 549 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 608

Query: 241 NIEKACQIYARMRGDADIPD--------------PNVVTYGALVDGLCKAHKVKDARDLL 300
           NIEKACQIYARMRGDADIPD              PNVVTYGALVDGLCKAHKVKDARDLL
Sbjct: 609 NIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 668

Query: 301 ETMFVDGCEPNTIIYDALIDGF-----------VFHKMVERGYNPNVYTYSSLIDRLFKD 360
           ETMFVDGCEPNTI+YDALIDGF           VFHKMVE GYNPNVYTYSSLIDRLFKD
Sbjct: 669 ETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKD 728

Query: 361 KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
           KRLDLVLKVLSKMLENSCAPN+VIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY
Sbjct: 729 KRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 788

Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
           TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ
Sbjct: 789 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 848

Query: 481 TYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
           TYWPKHVSSYCKVIEGY+REFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL
Sbjct: 849 TYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 908

Query: 541 ELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 582
           ELHKEVISASMSMAAKKN+YTSLIYSFS+ASKIGHAFELFYDMIRDGVIPDLGTFVHLLM
Sbjct: 909 ELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 968

[Close]

BLAST of IVF0023158 vs. NCBI nr
Match: XP_038884804.1 (pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Benincasa hispida])

HSP 1 Score: 1060 bits (2740), Expect = 0.0
Identity = 534/628 (85.03%), Postives = 559/628 (89.01%), Query Frame = 0


Query: 1    MIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIG------- 60
            MIAEGC+PSYTIFNSLVHAYCKS DF YAYKLLKKME CECKPGYVVYNILIG       
Sbjct: 379  MIAEGCFPSYTIFNSLVHAYCKSGDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGEE 438

Query: 61   ----ITFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
                +TFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKA+KVIHEM+GNGF+PD
Sbjct: 439  LPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAHKVIHEMVGNGFIPD 498

Query: 121  TSTYSE--GRKCLFS--------FKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLD 180
            TSTYSE  G  C  S        FKEMKGTGV+PDVYTYTILIDCFSKAGLIKQAHNWLD
Sbjct: 499  TSTYSEAIGFLCNASRVENAFLLFKEMKGTGVVPDVYTYTILIDCFSKAGLIKQAHNWLD 558

Query: 181  EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
            EMVRDGCEPTVVTYTTLIHAYLKAKKVS+ANELFELMIAKGC PNVITYTALIDGYCKSG
Sbjct: 559  EMVRDGCEPTVVTYTTLIHAYLKAKKVSIANELFELMIAKGCLPNVITYTALIDGYCKSG 618

Query: 241  NIEKACQIYARMRGDADIPD--------------PNVVTYGALVDGLCKAHKVKDARDLL 300
            NIEKACQIYARMRGD +IPD              PNVVTYGALVDGLCKAHKVKDARDLL
Sbjct: 619  NIEKACQIYARMRGDTNIPDVDMYFKIENNVAEKPNVVTYGALVDGLCKAHKVKDARDLL 678

Query: 301  ETMFVDGCEPNTIIYDALIDGF-----------VFHKMVERGYNPNVYTYSSLIDRLFKD 360
            ETMFV+GCEPNTI+YDALIDGF           VF KMVERGYNPNVYTYSSLIDRLFKD
Sbjct: 679  ETMFVEGCEPNTIVYDALIDGFCKAGKLDEAQEVFRKMVERGYNPNVYTYSSLIDRLFKD 738

Query: 361  KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
            KRLDLVLK+LSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY
Sbjct: 739  KRLDLVLKMLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 798

Query: 421  TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
            TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCA GHLDEAYALLEEMKQ
Sbjct: 799  TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCAAGHLDEAYALLEEMKQ 858

Query: 481  TYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
            TYWPKHVSSYCKVIEGY+REFILSLGLLEEVEKN SAPIILLY+VLIDNFVKAGRLE+A+
Sbjct: 859  TYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNDSAPIILLYRVLIDNFVKAGRLELAM 918

Query: 541  ELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 582
            +LHKEVISASM MAAKKNMYT+LI SFS+ +KIG AFELFYDM+R+G IPDLGTFVHL++
Sbjct: 919  DLHKEVISASMPMAAKKNMYTTLIQSFSNTTKIGQAFELFYDMLREGAIPDLGTFVHLIL 978

[Close]

BLAST of IVF0023158 vs. NCBI nr
Match: XP_022150421.1 (pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Momordica charantia] >XP_022150422.1 pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Momordica charantia] >XP_022150423.1 pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Momordica charantia])

HSP 1 Score: 1044 bits (2700), Expect = 0.0
Identity = 527/628 (83.92%), Postives = 554/628 (88.22%), Query Frame = 0


Query: 1    MIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIG------- 60
            MIAEGC+PSY IFNSLVHAYC+S DF YAYKLLKKME C CKPGYVVYNILIG       
Sbjct: 385  MIAEGCFPSYRIFNSLVHAYCRSGDFSYAYKLLKKMENCGCKPGYVVYNILIGGICGSEE 444

Query: 61   ----ITFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
                +TFELAEKAYNEMLSAGTVLNKVNVV+FARCLCGFGKFEKAYKVIHEMM NGF+PD
Sbjct: 445  LPGPVTFELAEKAYNEMLSAGTVLNKVNVVNFARCLCGFGKFEKAYKVIHEMMDNGFIPD 504

Query: 121  TSTYSE--GRKCLFS--------FKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLD 180
            TSTYSE  G  C  S        FKEMKGTGV+PDVYTYTILIDCFSKAGLIKQAHNWLD
Sbjct: 505  TSTYSEVIGFLCNASRVENAFLLFKEMKGTGVVPDVYTYTILIDCFSKAGLIKQAHNWLD 564

Query: 181  EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
            EMVRDGCEPTVVTYTTLIHAYLKAKKVS+ANELFELM+AKGC PNVITYTALIDGYCKSG
Sbjct: 565  EMVRDGCEPTVVTYTTLIHAYLKAKKVSIANELFELMLAKGCIPNVITYTALIDGYCKSG 624

Query: 241  NIEKACQIYARMRGDADIPD--------------PNVVTYGALVDGLCKAHKVKDARDLL 300
            NIEKACQIY+RMRGD DIPD              PNVVT+GALVDGLCKAHKVKDAR+LL
Sbjct: 625  NIEKACQIYSRMRGDEDIPDVDMYFKTENNVSEKPNVVTFGALVDGLCKAHKVKDARNLL 684

Query: 301  ETMFVDGCEPNTIIYDALIDGF-----------VFHKMVERGYNPNVYTYSSLIDRLFKD 360
            ETMF++GCEPN I+YDALIDGF           VF KMVERGYNPNVYTYSSLIDRLFKD
Sbjct: 685  ETMFLEGCEPNNIVYDALIDGFCKAAKLDEAQEVFAKMVERGYNPNVYTYSSLIDRLFKD 744

Query: 361  KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
            KRLD VLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY
Sbjct: 745  KRLDFVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 804

Query: 421  TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
            TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATG LDEAYALL+EMKQ
Sbjct: 805  TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGFLDEAYALLDEMKQ 864

Query: 481  TYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
            TYWPKH+SSYCKVIEGY REFILSLGLLEE EKN SAPIILLY+VLIDNF+KAGRLEVAL
Sbjct: 865  TYWPKHISSYCKVIEGYNREFILSLGLLEEAEKNDSAPIILLYRVLIDNFIKAGRLEVAL 924

Query: 541  ELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 582
            +LHKEVISASMSMAAKKNMYTSLI+SFS+A+KIGHAFELF DMIR G IPDLGTFVHL+ 
Sbjct: 925  KLHKEVISASMSMAAKKNMYTSLIHSFSNATKIGHAFELFNDMIRQGAIPDLGTFVHLIT 984

[Close]

BLAST of IVF0023158 vs. TAIR 10
Match: AT1G06710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 721.8 bits (1862), Expect = 4.3e-208
Identity = 369/628 (58.76%), Postives = 447/628 (71.18%), Query Frame = 0


Query: 1   MIAEGCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIGI------ 60
           M+ EGCYPS  IFNSLVHAYC S D  YAYKLLKKM  C   PGYVVYNILIG       
Sbjct: 363 MMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKD 422

Query: 61  -----TFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPD 120
                  +LAEKAY+EML+AG VLNK+NV SF RCLC  GK+EKA+ VI EM+G GF+PD
Sbjct: 423 SLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD 482

Query: 121 TSTYSEGRKCLFS----------FKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLD 180
           TSTYS+    L +          F+EMK  G++ DVYTYTI++D F KAGLI+QA  W +
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 542

Query: 181 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSG 240
           EM   GC P VVTYT LIHAYLKAKKVS ANELFE M+++GC PN++TY+ALIDG+CK+G
Sbjct: 543 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAG 602

Query: 241 NIEKACQIYARMRGDADIPD--------------PNVVTYGALVDGLCKAHKVKDARDLL 300
            +EKACQI+ RM G  D+PD              PNVVTYGAL+DG CK+H+V++AR LL
Sbjct: 603 QVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLL 662

Query: 301 ETMFVDGCEPNTIIYDALIDGF-----------VFHKMVERGYNPNVYTYSSLIDRLFKD 360
           + M ++GCEPN I+YDALIDG            V  +M E G+   +YTYSSLIDR FK 
Sbjct: 663 DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKV 722

Query: 361 KRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTY 420
           KR DL  KVLSKMLENSCAPNVVIYTEMIDGL KV KTDEAYKLM MMEEKGC+PNVVTY
Sbjct: 723 KRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTY 782

Query: 421 TAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQ 480
           TAMIDGFG  GK++ CLEL   MGSKG APN+VTY VLI+HCC  G LD A+ LLEEMKQ
Sbjct: 783 TAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842

Query: 481 TYWPKHVSSYCKVIEGYRREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVAL 540
           T+WP H + Y KVIEG+ +EFI SLGLL+E+ ++ +AP + +Y++LIDN +KA RLE+AL
Sbjct: 843 THWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMAL 902

Query: 541 ELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLM 583
            L +EV + S ++    + Y SLI S   A+K+  AF+LF +M + GVIP++ +F  L+ 
Sbjct: 903 RLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIK 962

[Close]

BLAST of IVF0023158 vs. TAIR 10
Match: AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 244.6 bits (623), Expect = 2.0e-64
Identity = 187/572 (32.69%), Postives = 273/572 (47.73%), Query Frame = 0


Query: 25  DFLYAYKLLKKM---ETCECKPGYVV--YNILI------GITFELAEKAYNEMLSAGTVL 84
           D LY   L +KM   E  E K   ++  YN L+      G+  E+ ++ Y EML      
Sbjct: 158 DALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEM-KQVYMEMLEDKVCP 217

Query: 85  NKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSE------GRKCLFS----F 144
           N           C  G  E+A + + +++  G  PD  TY+        RK L S    F
Sbjct: 218 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF 277

Query: 145 KEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKA 204
            EM   G   +   YT LI     A  I +A +   +M  D C PTV TYT LI +   +
Sbjct: 278 NEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS 337

Query: 205 KKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDPNVV 264
           ++ S A  L + M   G  PN+ TYT LID  C     EKA ++  +M     +  PNV+
Sbjct: 338 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLM--PNVI 397

Query: 265 TYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIIYDALIDGF----------VFHKMV 324
           TY AL++G CK   ++DA D++E M      PNT  Y+ LI G+          V +KM+
Sbjct: 398 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKML 457

Query: 325 ERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTD 384
           ER   P+V TY+SLID   +    D   ++LS M +    P+   YT MID L K  + +
Sbjct: 458 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 517

Query: 385 EAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLI 444
           EA  L   +E+KG  PNVV YTA+IDG+ KAGKVD+   +  +M SK C PN +T+  LI
Sbjct: 518 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 577

Query: 445 NHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYRR--EFILSLGLLEEVEKNGSA 504
           +  CA G L EA  L E+M +      VS+   +I    +  +F  +    +++  +G+ 
Sbjct: 578 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 637

Query: 505 PIILLYKVLIDNFVKAGRLEVALELHKEVISASM---SMAAKKNMYTSLIYSFSHASKIG 561
           P    Y   I  + + GRL     L  E + A M    ++     Y+SLI  +    +  
Sbjct: 638 PDAHTYTTFIQTYCREGRL-----LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 697

[Close]

BLAST of IVF0023158 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 241.5 bits (615), Expect = 1.7e-63
Identity = 140/445 (31.46%), Postives = 240/445 (53.93%), Query Frame = 0


Query: 138 YTILIDCFSKAGLIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKK-VSVANELFELM 197
           + +++  +S+  LI +A + +      G  P V++Y  ++ A +++K+ +S A  +F+ M
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 198 IAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDPNVVTYGALVDGLCKAH 257
           +     PNV TY  LI G+C +GNI+ A  ++ +M     +  PNVVTY  L+DG CK  
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCL--PNVVTYNTLIDGYCKLR 256

Query: 258 KVKDARDLLETMFVDGCEPNTIIYDALIDG-----------FVFHKMVERGYNPNVYTYS 317
           K+ D   LL +M + G EPN I Y+ +I+G           FV  +M  RGY+ +  TY+
Sbjct: 257 KIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYN 316

Query: 318 SLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEK 377
           +LI    K+      L + ++ML +   P+V+ YT +I  + K    + A + +  M  +
Sbjct: 317 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 376

Query: 378 GCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEA 437
           G  PN  TYT ++DGF + G +++   + REM   G +P+ VTY  LIN  C TG +++A
Sbjct: 377 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 436

Query: 438 YALLEEMKQTYWPKHVSSYCKVIEGYRREFIL--SLGLLEEVEKNGSAPIILLYKVLIDN 497
            A+LE+MK+      V SY  V+ G+ R + +  +L +  E+ + G  P  + Y  LI  
Sbjct: 437 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 496

Query: 498 FVKAGRLEVALELHKEVISASMSMAAKKNMYTSLIYSFSHASKIGHAFELFYDMIRDGVI 557
           F +  R + A +L++E++   + +   +  YT+LI ++     +  A +L  +M+  GV+
Sbjct: 497 FCEQRRTKEACDLYEEML--RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 556

Query: 558 PDLGTFVHLLMGLIRVRMWEEALQL 569
           PD+ T+  L+ GL +     EA +L
Sbjct: 557 PDVVTYSVLINGLNKQSRTREAKRL 577

[Close]

BLAST of IVF0023158 vs. TAIR 10
Match: AT1G63080.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 238.4 bits (607), Expect = 1.4e-62
Identity = 164/539 (30.43%), Postives = 261/539 (48.42%), Query Frame = 0


Query: 49  NILIGITFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVI---HEMMGNG 108
           N L+ +  + A   + EM+ +       ++V F++ L    K +K   VI    +M   G
Sbjct: 39  NALLHLKLDEAVDLFGEMVKSRPF---PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILG 98

Query: 109 FVPDTSTYSEGRKCL-----FSFK-----EMKGTGVIPDVYTYTILIDCFSKAGLIKQAH 168
              +  TY+    CL      SF      +M   G  P + T   L++ F     I +A 
Sbjct: 99  VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 158

Query: 169 NWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGY 228
             +D+MV  G +P  VT+TTL+H   +  K S A  L E M+ KGC P+++TY A+I+G 
Sbjct: 159 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 218

Query: 229 CKSGNIEKACQIYARMRGDADIPDPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEP 288
           CK G  + A  +  +M  +    + +VV Y  ++D LCK   V DA +L   M   G  P
Sbjct: 219 CKRGEPDLALNLLNKM--EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 278

Query: 289 NTIIYDALID-----------GFVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVL 348
           +   Y +LI              +   M+ER  NPNV T++SLID   K+ +L    K+ 
Sbjct: 279 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 338

Query: 349 SKMLENSCAPNVVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKA 408
            +M++ S  PN+V Y  +I+G     + DEA ++  +M  K C P+VVTY  +I+GF KA
Sbjct: 339 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 398

Query: 409 GKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSY 468
            KV   +ELFR+M  +G   N VTYT LI+        D A  + ++M       ++ +Y
Sbjct: 399 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 458

Query: 469 CKVIEGYRREFIL--SLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVIS 528
             +++G  +   L  ++ + E ++K+   P I  Y ++ +   KAG++E   +L      
Sbjct: 459 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF----- 518

Query: 529 ASMSMAAKKN---MYTSLIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIR 559
            S+S+   K     Y ++I  F        A+ LF  M  DG +PD GT+  L+   +R
Sbjct: 519 CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLR 567

[Close]

BLAST of IVF0023158 vs. TAIR 10
Match: AT3G06920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 238.4 bits (607), Expect = 1.4e-62
Identity = 163/594 (27.44%), Postives = 274/594 (46.13%), Query Frame = 0


Query: 5   GCYPSYTIFNSLVHAYCKSDDFLYAYKLLKKMETCECKPGYVVYNILIGI-----TFELA 64
           G  P+  +F +L+  + K      A  LL +M++       V+YN+ I         ++A
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA 257

Query: 65  EKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTY------ 124
            K ++E+ + G   ++V   S    LC   + ++A ++   +  N  VP T  Y      
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG 317

Query: 125 --SEGR--KCLFSFKEMKGTGVIPDVYTYTILIDCFSKAGLIKQAHNWLDEMVRDGCEPT 184
             S G+  +     +  +  G IP V  Y  ++ C  K G + +A    +EM +D   P 
Sbjct: 318 YGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PN 377

Query: 185 VVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYA 244
           + TY  LI    +A K+  A EL + M   G FPNV T   ++D  CKS  +++AC ++ 
Sbjct: 378 LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFE 437

Query: 245 RMRGDADIPDPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIIYDALIDGF-- 304
            M  D  +  P+ +T+ +L+DGL K  +V DA  + E M    C  N+I+Y +LI  F  
Sbjct: 438 EM--DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFN 497

Query: 305 ---------VFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNVVI 364
                    ++  M+ +  +P++   ++ +D +FK    +    +  ++      P+   
Sbjct: 498 HGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARS 557

Query: 365 YTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMG 424
           Y+ +I GL K    +E Y+L   M+E+GC  +   Y  +IDGF K GKV+K  +L  EM 
Sbjct: 558 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 617

Query: 425 SKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYRREFILS 484
           +KG  P  VTY  +I+       LDEAY L EE K      +V  Y  +I+G+ +   + 
Sbjct: 618 TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRID 677

Query: 485 LG--LLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNMYTS 544
               +LEE+ + G  P +  +  L+D  VKA  +  AL   + +    +     +  Y  
Sbjct: 678 EAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM--KELKCTPNQVTYGI 737

Query: 545 LIYSFSHASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRMWEEALQLSD 571
           LI       K   AF  + +M + G+ P   ++  ++ GL +     EA  L D
Sbjct: 738 LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786

The following BLAST results are available for this feature:

BLAST of IVF0023158 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9X9	3.6e-207	59.32	Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidop...	[more]
Q9LSL9	2.8e-63	32.69	Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX...	[more]
Q9FIX3	2.4e-62	31.46	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q9M907	2.0e-61	27.44	Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana OX...	[more]
Q9CAN5	2.0e-61	30.43	Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidop...	[more]

BLAST of IVF0023158 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BE59	0.0e+00	91.24	pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Cucumis ...	[more]
A0A5A7V4K9	0.0e+00	91.79	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0KDY8	0.0e+00	89.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G041170 PE=4 SV=1	[more]
A0A6J1DAP3	1.2e-303	83.92	pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Momordic...	[more]
A0A6J1EVK3	1.8e-302	84.08	pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Cucurbit...	[more]

BLAST of IVF0023158 vs. NCBI nr


Match Name	Identity	Description
XP_008445686.1	91.24	PREDICTED: pentatricopeptide repeat-containing protein At1g06710, mitochondrial ...	[more]
KAA0063182.1	91.79	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_004140980.1	89.33	pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Cucumis sa...	[more]
XP_038884804.1	85.03	pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Benincasa ...	[more]
XP_022150421.1	83.92	pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Momordica ...	[more]

BLAST of IVF0023158 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06710.1	4.3e-208	58.76	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G65560.1	2.0e-64	32.69	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G39710.1	1.7e-63	31.46	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G63080.1	1.4e-62	30.43	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G06920.1	1.4e-62	27.44	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 292..361 e-value: 7.8E-18 score: 66.7 coord: 236..291 e-value: 5.5E-14 score: 54.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 362..455 e-value: 3.0E-29 score: 103.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..118 e-value: 3.0E-20 score: 74.9 coord: 456..584 e-value: 3.1E-17 score: 65.0 coord: 119..235 e-value: 1.6E-38 score: 134.9
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 477..502 e-value: 0.025 score: 14.8 coord: 83..106 e-value: 0.057 score: 13.7 coord: 513..542 e-value: 2.0E-4 score: 21.4 coord: 12..40 e-value: 8.3E-5 score: 22.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 240..287 e-value: 6.5E-10 score: 39.1 coord: 369..417 e-value: 1.8E-18 score: 66.5 coord: 168..217 e-value: 6.3E-17 score: 61.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 288..343 e-value: 2.2E-10 score: 40.5
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 130..162 e-value: 2.0E-8 score: 33.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 372..405 e-value: 1.0E-11 score: 42.2 coord: 407..433 e-value: 5.2E-6 score: 24.3 coord: 12..43 e-value: 1.7E-5 score: 22.7 coord: 243..277 e-value: 1.1E-7 score: 29.5 coord: 206..232 e-value: 7.8E-9 score: 33.2 coord: 513..545 e-value: 2.2E-6 score: 25.5 coord: 171..205 e-value: 1.9E-9 score: 35.1 coord: 337..371 e-value: 8.2E-7 score: 26.8 coord: 136..170 e-value: 1.9E-9 score: 35.1 coord: 302..336 e-value: 7.3E-7 score: 27.0 coord: 83..110 e-value: 5.9E-6 score: 24.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 74..108 score: 9.328124
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 510..544 score: 9.470621
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 405..439 score: 10.632519
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 134..168 score: 12.83574
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 9..43 score: 10.215989
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 241..275 score: 12.024604
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 370..404 score: 14.085328
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 300..334 score: 10.785976
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 335..369 score: 11.695765
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 204..238 score: 12.189023
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 169..203 score: 11.783455
None	No IPR available	PANTHER	PTHR47934	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL	coord: 1..581
None	No IPR available	PANTHER	PTHR47934:SF6	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL	coord: 1..581

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0023158.2	IVF0023158.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding