
IVF0023005 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATAAAATCACATATACACCAGAATTTCTCCATATATATATATATATATATATTTATTTTCCTCTCTCTCTTTGTCTATAATGAAAATGGCTATTACTCCTTCTTCACCAAAGATCCTTCCTTCTGCCCAAATTTTCTCAATCAAATTCTCACATTCATCCACCTTAATTTTTGTAAAGTTCAAAACTTTCATCCACACTATCATCTTCTCTCAATTTTGTCGATTGGCTCGAGCCATCTCCCGAGCCAAATCGACAGTGGTTCATATTCTAAAGAAAAGTTATCACTACAAGGACAAGAAAAAGAACAAGATCTTTTTCGGATCGTTTAGGCTCCATTACAATTGGTGTTCTTCCCATGTAATGCCCGTGCCCGATCCCATATGGGAATTAGGTCATTTCTACTACGACCATGCCACCTCCACAGCTGCCGATGGCTCGCAACTGTCGGGATATTTGCAGTGGTTGGAAGAGAGAAAATTGGAGAGTGAAACAATGACGACGACCACAACGGCGACAACGGCAGAGGTGAATGAGATCGACAAATTGGCGGAGATGTTCATTGCAAGCTGCCATGAGAAATTCAGGTTGGAGAAACAAGAATCTGCTAGGAGATTTCAAGCAATGATGGCTAGAAGCATGTGAAGCAAAAATTTGAGAAAGAAAAAGAAAATAGTTGAAAGGTTTTTGGGGATTGTGGAAAATTATTAATAGATGAAGAAGGTGAGTTTGGAGGGGGTGCGTGGTAATGTTTTTGTGAAATTATTATTGTTTAATGTAAATTATTTGGGGGTGGAATTAATCATTTTCATCATATCCAAAATTAAGCTAGTTAATTAAATTAGTTTTCTTTAGGATATATATGTGT AATAAAATCACATATACACCAGAATTTCTCCATATATATATATATATATATATTTATTTTCCTCTCTCTCTTTGTCTATAATGAAAATGGCTATTACTCCTTCTTCACCAAAGATCCTTCCTTCTGCCCAAATTTTCTCAATCAAATTCTCACATTCATCCACCTTAATTTTTGTAAAGTTCAAAACTTTCATCCACACTATCATCTTCTCTCAATTTTGTCGATTGGCTCGAGCCATCTCCCGAGCCAAATCGACAGTGGTTCATATTCTAAAGAAAAGTTATCACTACAAGGACAAGAAAAAGAACAAGATCTTTTTCGGATCGTTTAGGCTCCATTACAATTGGTGTTCTTCCCATGTAATGCCCGTGCCCGATCCCATATGGGAATTAGGTCATTTCTACTACGACCATGCCACCTCCACAGCTGCCGATGGCTCGCAACTGTCGGGATATTTGCAGTGGTTGGAAGAGAGAAAATTGGAGAGTGAAACAATGACGACGACCACAACGGCGACAACGGCAGAGGTGAATGAGATCGACAAATTGGCGGAGATGTTCATTGCAAGCTGCCATGAGAAATTCAGGTTGGAGAAACAAGAATCTGCTAGGAGATTTCAAGCAATGATGGCTAGAAGCATGTGAAGCAAAAATTTGAGAAAGAAAAAGAAAATAGTTGAAAGGTTTTTGGGGATTGTGGAAAATTATTAATAGATGAAGAAGGTGAGTTTGGAGGGGGTGCGTGGTAATGTTTTTGTGAAATTATTATTGTTTAATGTAAATTATTTGGGGGTGGAATTAATCATTTTCATCATATCCAAAATTAAGCTAGTTAATTAAATTAGTTTTCTTTAGGATATATATGTGT ATGAAAATGGCTATTACTCCTTCTTCACCAAAGATCCTTCCTTCTGCCCAAATTTTCTCAATCAAATTCTCACATTCATCCACCTTAATTTTTGTAAAGTTCAAAACTTTCATCCACACTATCATCTTCTCTCAATTTTGTCGATTGGCTCGAGCCATCTCCCGAGCCAAATCGACAGTGGTTCATATTCTAAAGAAAAGTTATCACTACAAGGACAAGAAAAAGAACAAGATCTTTTTCGGATCGTTTAGGCTCCATTACAATTGGTGTTCTTCCCATGTAATGCCCGTGCCCGATCCCATATGGGAATTAGGTCATTTCTACTACGACCATGCCACCTCCACAGCTGCCGATGGCTCGCAACTGTCGGGATATTTGCAGTGGTTGGAAGAGAGAAAATTGGAGAGTGAAACAATGACGACGACCACAACGGCGACAACGGCAGAGGTGAATGAGATCGACAAATTGGCGGAGATGTTCATTGCAAGCTGCCATGAGAAATTCAGGTTGGAGAAACAAGAATCTGCTAGGAGATTTCAAGCAATGATGGCTAGAAGCATGTGA MKMAITPSSPKILPSAQIFSIKFSHSSTLIFVKFKTFIHTIIFSQFCRLARAISRAKSTVVHILKKSYHYKDKKKNKIFFGSFRLHYNWCSSHVMPVPDPIWELGHFYYDHATSTAADGSQLSGYLQWLEERKLESETMTTTTTATTAEVNEIDKLAEMFIASCHEKFRLEKQESARRFQAMMARSM Homology
BLAST of IVF0023005 vs. ExPASy TrEMBL
Match: A0A5D3BVA7 (DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00500 PE=4 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 3.4e-98 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of IVF0023005 vs. ExPASy TrEMBL
Match: A0A1S3C8P2 (uncharacterized protein LOC103498096 OS=Cucumis melo OX=3656 GN=LOC103498096 PE=4 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 3.4e-98 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of IVF0023005 vs. ExPASy TrEMBL
Match: A0A0A0KP26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523130 PE=4 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 1.8e-91 Identity = 178/187 (95.19%), Postives = 179/187 (95.72%), Query Frame = 0
BLAST of IVF0023005 vs. ExPASy TrEMBL
Match: A0A6J1HAU6 (uncharacterized protein LOC111462262 OS=Cucurbita moschata OX=3662 GN=LOC111462262 PE=4 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 2.1e-71 Identity = 146/181 (80.66%), Postives = 157/181 (86.74%), Query Frame = 0
BLAST of IVF0023005 vs. ExPASy TrEMBL
Match: A0A6J1JV22 (uncharacterized protein LOC111487754 OS=Cucurbita maxima OX=3661 GN=LOC111487754 PE=4 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 5.6e-69 Identity = 142/181 (78.45%), Postives = 156/181 (86.19%), Query Frame = 0
BLAST of IVF0023005 vs. NCBI nr
Match: XP_008458796.1 (PREDICTED: uncharacterized protein LOC103498096 [Cucumis melo] >KAA0037558.1 DUF761 domain-containing protein [Cucumis melo var. makuwa] >TYK03114.1 DUF761 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 365 bits (936), Expect = 5.12e-127 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of IVF0023005 vs. NCBI nr
Match: XP_011655408.1 (uncharacterized protein LOC105435523 [Cucumis sativus] >KGN51368.1 hypothetical protein Csa_008863 [Cucumis sativus]) HSP 1 Score: 342 bits (878), Expect = 3.57e-118 Identity = 178/187 (95.19%), Postives = 179/187 (95.72%), Query Frame = 0
BLAST of IVF0023005 vs. NCBI nr
Match: XP_038890518.1 (uncharacterized protein LOC120080048 [Benincasa hispida]) HSP 1 Score: 328 bits (840), Expect = 2.06e-112 Identity = 168/187 (89.84%), Postives = 175/187 (93.58%), Query Frame = 0
BLAST of IVF0023005 vs. NCBI nr
Match: XP_023548199.1 (uncharacterized protein LOC111806908 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023548209.1 uncharacterized protein LOC111806908 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 278 bits (711), Expect = 7.86e-93 Identity = 145/181 (80.11%), Postives = 156/181 (86.19%), Query Frame = 0
BLAST of IVF0023005 vs. NCBI nr
Match: KAG7033099.1 (hypothetical protein SDJN02_07152, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 275 bits (704), Expect = 8.84e-92 Identity = 146/181 (80.66%), Postives = 157/181 (86.74%), Query Frame = 0
BLAST of IVF0023005 vs. TAIR 10
Match: AT3G57950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42180.1); Has 81 Blast hits to 81 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 125.2 bits (313), Expect = 5.6e-29 Identity = 77/176 (43.75%), Postives = 101/176 (57.39%), Query Frame = 0
BLAST of IVF0023005 vs. TAIR 10
Match: AT5G06790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible, petal differentiation and expansion stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 117.9 bits (294), Expect = 9.0e-27 Identity = 82/194 (42.27%), Postives = 106/194 (54.64%), Query Frame = 0
BLAST of IVF0023005 vs. TAIR 10
Match: AT2G42180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 74.7 bits (182), Expect = 8.7e-14 Identity = 65/176 (36.93%), Postives = 89/176 (50.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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