IVF0022886 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCAACTCTTGTCGCCAATTGCTCGAGAAAGTAAGTAGCAAAGACATGGCTAACGCGCGCAAGGAGGAGTTTGGAGACAAACTGCACCTTGGCGAGATAACTTCCATCACTTGTGTCCGGAAAGGAGAAGAAGTATGGGTATTTGGCATCGAGAGGTTCTAA ATGGCCAACTCTTGTCGCCAATTGCTCGAGAAAGTAAGTAGCAAAGACATGGCTAACGCGCGCAAGGAGGAGTTTGGAGACAAACTGCACCTTGGCGAGATAACTTCCATCACTTGTGTCCGGAAAGGAGAAGAAGTATGGGTATTTGGCATCGAGAGGTTCTAA ATGGCCAACTCTTGTCGCCAATTGCTCGAGAAAGTAAGTAGCAAAGACATGGCTAACGCGCGCAAGGAGGAGTTTGGAGACAAACTGCACCTTGGCGAGATAACTTCCATCACTTGTGTCCGGAAAGGAGAAGAAGTATGGGTATTTGGCATCGAGAGGTTCTAA MANSCRQLLEKVSSKDMANARKEEFGDKLHLGEITSITCVRKGEEVWVFGIERF Homology
BLAST of IVF0022886 vs. ExPASy TrEMBL
Match: A0A5D3C951 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1933G00010 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 2.6e-11 Identity = 37/53 (69.81%), Postives = 42/53 (79.25%), Query Frame = 0
BLAST of IVF0022886 vs. ExPASy TrEMBL
Match: A0A5D3DDG5 (Cytochrome b561 and DOMON domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold305G00260 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 7.2e-09 Identity = 31/44 (70.45%), Postives = 38/44 (86.36%), Query Frame = 0
BLAST of IVF0022886 vs. ExPASy TrEMBL
Match: A0A5D3BHD0 (LINE-1 reverse transcriptase isogeny OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold369G00010 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 3.7e-05 Identity = 24/37 (64.86%), Postives = 28/37 (75.68%), Query Frame = 0
BLAST of IVF0022886 vs. ExPASy TrEMBL
Match: A0A5A7V332 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001430 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 3.7e-05 Identity = 24/37 (64.86%), Postives = 28/37 (75.68%), Query Frame = 0
BLAST of IVF0022886 vs. ExPASy TrEMBL
Match: A0A5D3CY29 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00960 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 6.3e-05 Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 0
BLAST of IVF0022886 vs. NCBI nr
Match: TYK07860.1 (uncharacterized protein E5676_scaffold1933G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 77.4 bits (189), Expect = 1.28e-15 Identity = 37/53 (69.81%), Postives = 42/53 (79.25%), Query Frame = 0
BLAST of IVF0022886 vs. NCBI nr
Match: KAA0026294.1 (cytochrome b561 and DOMON domain-containing protein [Cucumis melo var. makuwa] >TYK21490.1 cytochrome b561 and DOMON domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 68.9 bits (167), Expect = 4.80e-12 Identity = 31/44 (70.45%), Postives = 38/44 (86.36%), Query Frame = 0
BLAST of IVF0022886 vs. NCBI nr
Match: TYK21449.1 (hypothetical protein E5676_scaffold609G001190 [Cucumis melo var. makuwa]) HSP 1 Score: 55.8 bits (133), Expect = 3.23e-08 Identity = 25/31 (80.65%), Postives = 26/31 (83.87%), Query Frame = 0
BLAST of IVF0022886 vs. NCBI nr
Match: KAA0051792.1 (hypothetical protein E6C27_scaffold60G002010 [Cucumis melo var. makuwa]) HSP 1 Score: 55.8 bits (133), Expect = 4.02e-08 Identity = 25/31 (80.65%), Postives = 26/31 (83.87%), Query Frame = 0
BLAST of IVF0022886 vs. NCBI nr
Match: KAA0032002.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] >TYK16823.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 56.2 bits (134), Expect = 5.22e-08 Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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