IVF0022791 (gene) Melon (IVF77) v1

Overview


Name	IVF0022791
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Unknown protein
Location	chr04: 3254685 .. 3255108 (-)
RNA-Seq Expression	IVF0022791
Synteny	IVF0022791

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGCGTTGCTTCTGCTGAGGGAGAGAAGGCATTTCAGTCCTACTCGAAGGAGGTTATTGCTGGTTTCGGTGAGACCGATCTCCATCGCTCTTGGATTCGAGTACGAAAGTTTGATTACTGTTCTTCTTTTGTTGTTTAGAGGAGGTTTTTTAATGTAAATTCTTCTTCTCGTCGATTTAGGCTGCGGCTATGCGGAGTCCGCAGGAGAGGAACACGAGGCTGGAGGATTTGGATTTTGGCCCGAAAGAAGAAGCAGGTCTGTTTTCTACATCTCTTCTTTGTTTATTCTATACTTCAGTGTTCGTCGATTGAAATTTTACAATATGATTGACTACGATATGTACGATTTAACTCTTGCTGCGGTGGACGAATGCACTTGTGTTTCTGAAAGAATAATAGATGAAATCGGAGTAGTGTGA

mRNA sequence

ATGCAAAGCGTTGCTTCTGCTGAGGGAGAGAAGGCATTTCAGTCCTACTCGAAGGAGGTTATTGCTGGTTTCGGCTGCGGCTATGCGGAGTCCGCAGGAGAGGAACACGAGGCTGGAGGATTTGGATTTTGGCCCGAAAGAAGAAGCAGGTCTGTTTTCTACATCTCTTCTTTGTTTATTCTATACTTCAGTGTTCGTCGATTGAAATTTTACAATATGATTGACTACGATATGTACGATTTAACTCTTGCTGCGGTGGACGAATGCACTTGTGTTTCTGAAAGAATAATAGATGAAATCGGAGTAGTGTGA

Coding sequence (CDS)

ATGCAAAGCGTTGCTTCTGCTGAGGGAGAGAAGGCATTTCAGTCCTACTCGAAGGAGGTTATTGCTGGTTTCGGCTGCGGCTATGCGGAGTCCGCAGGAGAGGAACACGAGGCTGGAGGATTTGGATTTTGGCCCGAAAGAAGAAGCAGGTCTGTTTTCTACATCTCTTCTTTGTTTATTCTATACTTCAGTGTTCGTCGATTGAAATTTTACAATATGATTGACTACGATATGTACGATTTAACTCTTGCTGCGGTGGACGAATGCACTTGTGTTTCTGAAAGAATAATAGATGAAATCGGAGTAGTGTGA

Protein sequence

MQSVASAEGEKAFQSYSKEVIAGFGCGYAESAGEEHEAGGFGFWPERRSRSVFYISSLFILYFSVRRLKFYNMIDYDMYDLTLAAVDECTCVSERIIDEIGVV

Homology

[Close]

BLAST of IVF0022791 vs. ExPASy TrEMBL
Match: A0A5D3E6K3 (Putative sucrose-phosphate synthase isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007620 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 4.7e-49
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MQSVASAEGEKAFQSYSKEVIAGFGCGYAESAGEEHEAGGFGFWPERRSRSVFYISSLFI 60
           MQSVASAEGEKAFQSYSKEVIAGFGCGYAESAGEEHEAGGFGFWPERRSRSVFYISSLFI
Sbjct: 21  MQSVASAEGEKAFQSYSKEVIAGFGCGYAESAGEEHEAGGFGFWPERRSRSVFYISSLFI 80

Query: 61  LYFSVRRLKFYNMIDYDMYDLTLAAVDECTCVSERIIDEIGVV 104
           LYFSVRRLKFYNMIDYDMYDLTLAAVDECTCVSERIIDEIGVV
Sbjct: 81  LYFSVRRLKFYNMIDYDMYDLTLAAVDECTCVSERIIDEIGVV 123

[Close]

BLAST of IVF0022791 vs. ExPASy TrEMBL
Match: A0A5A7VCK5 (Putative sucrose-phosphate synthase isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001550 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.0e-48
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MQSVASAEGEKAFQSYSKEVIAGFGCGYAESAGEEHEAGGFGFWPERRSRSVFYISSLFI 60
           MQSVASAEGE+AFQSYSKEVIAGFGCGYAESAGEEHEAGGFGFWPERRSRSVFYISSLFI
Sbjct: 21  MQSVASAEGERAFQSYSKEVIAGFGCGYAESAGEEHEAGGFGFWPERRSRSVFYISSLFI 80

Query: 61  LYFSVRRLKFYNMIDYDMYDLTLAAVDECTCVSERIIDEIGVV 104
           LYFSVRRLKFYNMIDYDMYDLTLAAVDECTCVSERIIDEIGVV
Sbjct: 81  LYFSVRRLKFYNMIDYDMYDLTLAAVDECTCVSERIIDEIGVV 123

[Close]

BLAST of IVF0022791 vs. ExPASy TrEMBL
Match: A0A0A0LJ93 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G876040 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.5e-42
Identity = 92/103 (89.32%), Postives = 94/103 (91.26%), Query Frame = 0


Query: 1   MQSVASAEGEKAFQSYSKEVIAGFGCGYAESAGEEHEAGGFGFWPERRSRSVFYISSLFI 60
           M   ASAEGE+AFQSYSKEVI G GCGY ESAGEEHEAGGFG W ERRSRSVFYISSLFI
Sbjct: 1   MPKCASAEGERAFQSYSKEVITGSGCGYEESAGEEHEAGGFGIWRERRSRSVFYISSLFI 60

Query: 61  LYFSVRRLKFYNMIDYDMYDLTLAAVDECTCVSERIIDEIGVV 104
           LYFSVRRLKFYNMIDY +YDLTLAAVDECTCVSERIIDEIGVV
Sbjct: 61  LYFSVRRLKFYNMIDYHVYDLTLAAVDECTCVSERIIDEIGVV 103

[Close]

BLAST of IVF0022791 vs. NCBI nr
Match: TYK31448.1 (putative sucrose-phosphate synthase isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 201 bits (510), Expect = 1.69e-64
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MQSVASAEGEKAFQSYSKEVIAGFGCGYAESAGEEHEAGGFGFWPERRSRSVFYISSLFI 60
           MQSVASAEGEKAFQSYSKEVIAGFGCGYAESAGEEHEAGGFGFWPERRSRSVFYISSLFI
Sbjct: 21  MQSVASAEGEKAFQSYSKEVIAGFGCGYAESAGEEHEAGGFGFWPERRSRSVFYISSLFI 80

Query: 61  LYFSVRRLKFYNMIDYDMYDLTLAAVDECTCVSERIIDEIGVV 103
           LYFSVRRLKFYNMIDYDMYDLTLAAVDECTCVSERIIDEIGVV
Sbjct: 81  LYFSVRRLKFYNMIDYDMYDLTLAAVDECTCVSERIIDEIGVV 123

[Close]

BLAST of IVF0022791 vs. NCBI nr
Match: KAA0063329.1 (putative sucrose-phosphate synthase isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 199 bits (507), Expect = 4.83e-64
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MQSVASAEGEKAFQSYSKEVIAGFGCGYAESAGEEHEAGGFGFWPERRSRSVFYISSLFI 60
           MQSVASAEGE+AFQSYSKEVIAGFGCGYAESAGEEHEAGGFGFWPERRSRSVFYISSLFI
Sbjct: 21  MQSVASAEGERAFQSYSKEVIAGFGCGYAESAGEEHEAGGFGFWPERRSRSVFYISSLFI 80

Query: 61  LYFSVRRLKFYNMIDYDMYDLTLAAVDECTCVSERIIDEIGVV 103
           LYFSVRRLKFYNMIDYDMYDLTLAAVDECTCVSERIIDEIGVV
Sbjct: 81  LYFSVRRLKFYNMIDYDMYDLTLAAVDECTCVSERIIDEIGVV 123

[Close]

BLAST of IVF0022791 vs. NCBI nr
Match: KGN60081.1 (hypothetical protein Csa_002220 [Cucumis sativus])

HSP 1 Score: 177 bits (449), Expect = 1.79e-55
Identity = 92/103 (89.32%), Postives = 94/103 (91.26%), Query Frame = 0


Query: 1   MQSVASAEGEKAFQSYSKEVIAGFGCGYAESAGEEHEAGGFGFWPERRSRSVFYISSLFI 60
           M   ASAEGE+AFQSYSKEVI G GCGY ESAGEEHEAGGFG W ERRSRSVFYISSLFI
Sbjct: 1   MPKCASAEGERAFQSYSKEVITGSGCGYEESAGEEHEAGGFGIWRERRSRSVFYISSLFI 60

Query: 61  LYFSVRRLKFYNMIDYDMYDLTLAAVDECTCVSERIIDEIGVV 103
           LYFSVRRLKFYNMIDY +YDLTLAAVDECTCVSERIIDEIGVV
Sbjct: 61  LYFSVRRLKFYNMIDYHVYDLTLAAVDECTCVSERIIDEIGVV 103

[Close]

BLAST of IVF0022791 vs. NCBI nr
Match: XP_008466433.1 (PREDICTED: probable sucrose-phosphate synthase isoform X2 [Cucumis melo])

HSP 1 Score: 48.9 bits (115), Expect = 5.68e-05
Identity = 25/25 (100.00%), Postives = 25/25 (100.00%), Query Frame = 0


Query: 1  MQSVASAEGEKAFQSYSKEVIAGFG 25
          MQSVASAEGEKAFQSYSKEVIAGFG
Sbjct: 21 MQSVASAEGEKAFQSYSKEVIAGFG 45

[Close]

BLAST of IVF0022791 vs. NCBI nr
Match: XP_008466432.1 (PREDICTED: probable sucrose-phosphate synthase isoform X1 [Cucumis melo])

HSP 1 Score: 48.9 bits (115), Expect = 7.24e-05
Identity = 25/25 (100.00%), Postives = 25/25 (100.00%), Query Frame = 0


Query: 1  MQSVASAEGEKAFQSYSKEVIAGFG 25
          MQSVASAEGEKAFQSYSKEVIAGFG
Sbjct: 21 MQSVASAEGEKAFQSYSKEVIAGFG 45

The following BLAST results are available for this feature:

BLAST of IVF0022791 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0022791 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E6K3	4.7e-49	100.00	Putative sucrose-phosphate synthase isoform X2 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A5A7VCK5	1.0e-48	99.03	Putative sucrose-phosphate synthase isoform X2 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A0A0LJ93	5.5e-42	89.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G876040 PE=4 SV=1	[more]

BLAST of IVF0022791 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK31448.1	1.69e-64	100.00	putative sucrose-phosphate synthase isoform X2 [Cucumis melo var. makuwa]	[more]
KAA0063329.1	4.83e-64	99.03	putative sucrose-phosphate synthase isoform X2 [Cucumis melo var. makuwa]	[more]
KGN60081.1	1.79e-55	89.32	hypothetical protein Csa_002220 [Cucumis sativus]	[more]
XP_008466433.1	5.68e-05	100.00	PREDICTED: probable sucrose-phosphate synthase isoform X2 [Cucumis melo]	[more]
XP_008466432.1	7.24e-05	100.00	PREDICTED: probable sucrose-phosphate synthase isoform X1 [Cucumis melo]	[more]

BLAST of IVF0022791 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0022791.1	IVF0022791.1	mRNA