IVF0022689 (gene) Melon (IVF77) v1

Overview
NameIVF0022689
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCACTA en-spm transposon protein
Locationchr01: 20618679 .. 20618882 (+)
RNA-Seq ExpressionIVF0022689
SyntenyIVF0022689
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAGTGCGAGCAGTTCCATGACGTCATGTCCGCAATCCATAATAGAGCTTCAATTACAGGCTAAGTTTGATCAAGCTATGCAACAGATTGAAGAGCAGACAAGAAATCACGAAGCGTTAGTTTCAGAAGTGGAACGAATGCGGAAGCTGATAGATGACATGACTCGAGAACAACAAGGACCACTATATGATGATCCCTAG

mRNA sequence

ATGACAAGTGCGAGCAGTTCCATGACGTCATGTCCGCAATCCATAATAGAGCTTCAATTACAGGCTAAGTTTGATCAAGCTATGCAACAGATTGAAGAGCAGACAAGAAATCACGAAGCGTTAGTTTCAGAAGTGGAACGAATGCGGAAGCTGATAGATGACATGACTCGAGAACAACAAGGACCACTATATGATGATCCCTAG

Coding sequence (CDS)

ATGACAAGTGCGAGCAGTTCCATGACGTCATGTCCGCAATCCATAATAGAGCTTCAATTACAGGCTAAGTTTGATCAAGCTATGCAACAGATTGAAGAGCAGACAAGAAATCACGAAGCGTTAGTTTCAGAAGTGGAACGAATGCGGAAGCTGATAGATGACATGACTCGAGAACAACAAGGACCACTATATGATGATCCCTAG

Protein sequence

MTSASSSMTSCPQSIIELQLQAKFDQAMQQIEEQTRNHEALVSEVERMRKLIDDMTREQQGPLYDDP
Homology
BLAST of IVF0022689 vs. ExPASy TrEMBL
Match: A0A5A7TGL8 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002200 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.1e-26
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0

Query: 1   MTSASSSMTSCPQSIIELQLQAKFDQAMQQIEEQTRNHEALVSEVERMRKLIDDMTREQQ 60
           MTSASSSMTSCPQSIIELQLQAKFDQAMQQIEEQTRNHEALVSEVERMRKLIDDMTREQQ
Sbjct: 53  MTSASSSMTSCPQSIIELQLQAKFDQAMQQIEEQTRNHEALVSEVERMRKLIDDMTREQQ 112

Query: 61  GPLYDDP 68
           GPLYDDP
Sbjct: 113 GPLYDDP 119

BLAST of IVF0022689 vs. ExPASy TrEMBL
Match: A0A5D3C320 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00640 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.8e-17
Identity = 52/64 (81.25%), Postives = 57/64 (89.06%), Query Frame = 0

Query: 2   TSASSSMTSCPQSIIELQLQAKFDQAMQQIEEQTRNHEALVSEVERMRKLIDDMTREQQG 61
           TS SSS TSC QS +ELQLQAK DQAMQQIEEQTRNH+ALVS+VERMRKLI+DMTR QQG
Sbjct: 173 TSVSSSTTSCSQSTVELQLQAKLDQAMQQIEEQTRNHDALVSKVERMRKLIEDMTRVQQG 232

Query: 62  PLYD 66
           P +D
Sbjct: 233 PPHD 236

BLAST of IVF0022689 vs. ExPASy TrEMBL
Match: A0A5A7TZT1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold670G00090 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.1e-17
Identity = 52/65 (80.00%), Postives = 56/65 (86.15%), Query Frame = 0

Query: 3   SASSSMTSCPQSIIELQLQAKFDQAMQQIEEQTRNHEALVSEVERMRKLIDDMTREQQGP 62
           SASSS TSC QS +ELQLQAK DQ MQQI E TRNHEALVSEVERM KLI+DMT++QQGP
Sbjct: 249 SASSSTTSCLQSTVELQLQAKLDQTMQQIGENTRNHEALVSEVERMWKLIEDMTQQQQGP 308

Query: 63  LYDDP 68
            YDDP
Sbjct: 309 PYDDP 313

BLAST of IVF0022689 vs. ExPASy TrEMBL
Match: A0A5D3D3W4 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00910 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.1e-17
Identity = 52/65 (80.00%), Postives = 56/65 (86.15%), Query Frame = 0

Query: 3   SASSSMTSCPQSIIELQLQAKFDQAMQQIEEQTRNHEALVSEVERMRKLIDDMTREQQGP 62
           SASSS TSC QS +ELQLQAK DQ MQQI E TRNHEALVSEVERM KLI+DMT++QQGP
Sbjct: 216 SASSSTTSCLQSTVELQLQAKLDQTMQQIGENTRNHEALVSEVERMWKLIEDMTQQQQGP 275

Query: 63  LYDDP 68
            YDDP
Sbjct: 276 PYDDP 280

BLAST of IVF0022689 vs. ExPASy TrEMBL
Match: A0A5D3BM26 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1582G00090 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.0e-16
Identity = 49/63 (77.78%), Postives = 55/63 (87.30%), Query Frame = 0

Query: 3   SASSSMTSCPQSIIELQLQAKFDQAMQQIEEQTRNHEALVSEVERMRKLIDDMTREQQGP 62
           SASSS TSCPQS IELQLQ K D+ +Q+IEEQTRNHE LVSEVE+MRKLI+DMTR  QGP
Sbjct: 90  SASSSTTSCPQSTIELQLQGKLDKTIQRIEEQTRNHETLVSEVEQMRKLIEDMTRAHQGP 149

Query: 63  LYD 66
           L+D
Sbjct: 150 LHD 152

BLAST of IVF0022689 vs. NCBI nr
Match: KAA0041988.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK17924.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 125 bits (315), Expect = 1.76e-35
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0

Query: 1   MTSASSSMTSCPQSIIELQLQAKFDQAMQQIEEQTRNHEALVSEVERMRKLIDDMTREQQ 60
           MTSASSSMTSCPQSIIELQLQAKFDQAMQQIEEQTRNHEALVSEVERMRKLIDDMTREQQ
Sbjct: 53  MTSASSSMTSCPQSIIELQLQAKFDQAMQQIEEQTRNHEALVSEVERMRKLIDDMTREQQ 112

Query: 61  GPLYDDP 67
           GPLYDDP
Sbjct: 113 GPLYDDP 119

BLAST of IVF0022689 vs. NCBI nr
Match: KAA0040565.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK05608.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 96.7 bits (239), Expect = 1.17e-22
Identity = 52/64 (81.25%), Postives = 57/64 (89.06%), Query Frame = 0

Query: 2   TSASSSMTSCPQSIIELQLQAKFDQAMQQIEEQTRNHEALVSEVERMRKLIDDMTREQQG 61
           TS SSS TSC QS +ELQLQAK DQAMQQIEEQTRNH+ALVS+VERMRKLI+DMTR QQG
Sbjct: 173 TSVSSSTTSCSQSTVELQLQAKLDQAMQQIEEQTRNHDALVSKVERMRKLIEDMTRVQQG 232

Query: 62  PLYD 65
           P +D
Sbjct: 233 PPHD 236

BLAST of IVF0022689 vs. NCBI nr
Match: KAA0037426.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK00217.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 92.8 bits (229), Expect = 5.31e-22
Identity = 49/63 (77.78%), Postives = 55/63 (87.30%), Query Frame = 0

Query: 3   SASSSMTSCPQSIIELQLQAKFDQAMQQIEEQTRNHEALVSEVERMRKLIDDMTREQQGP 62
           SASSS TSCPQS IELQLQ K D+ +Q+IEEQTRNHE LVSEVE+MRKLI+DMTR  QGP
Sbjct: 90  SASSSTTSCPQSTIELQLQGKLDKTIQRIEEQTRNHETLVSEVEQMRKLIEDMTRAHQGP 149

Query: 63  LYD 65
           L+D
Sbjct: 150 LHD 152

BLAST of IVF0022689 vs. NCBI nr
Match: TYK18159.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 95.5 bits (236), Expect = 7.29e-22
Identity = 52/65 (80.00%), Postives = 56/65 (86.15%), Query Frame = 0

Query: 3   SASSSMTSCPQSIIELQLQAKFDQAMQQIEEQTRNHEALVSEVERMRKLIDDMTREQQGP 62
           SASSS TSC QS +ELQLQAK DQ MQQI E TRNHEALVSEVERM KLI+DMT++QQGP
Sbjct: 216 SASSSTTSCLQSTVELQLQAKLDQTMQQIGENTRNHEALVSEVERMWKLIEDMTQQQQGP 275

Query: 63  LYDDP 67
            YDDP
Sbjct: 276 PYDDP 280

BLAST of IVF0022689 vs. NCBI nr
Match: KAA0048660.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 95.5 bits (236), Expect = 1.22e-21
Identity = 52/65 (80.00%), Postives = 56/65 (86.15%), Query Frame = 0

Query: 3   SASSSMTSCPQSIIELQLQAKFDQAMQQIEEQTRNHEALVSEVERMRKLIDDMTREQQGP 62
           SASSS TSC QS +ELQLQAK DQ MQQI E TRNHEALVSEVERM KLI+DMT++QQGP
Sbjct: 249 SASSSTTSCLQSTVELQLQAKLDQTMQQIGENTRNHEALVSEVERMWKLIEDMTQQQQGP 308

Query: 63  LYDDP 67
            YDDP
Sbjct: 309 PYDDP 313

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TGL82.1e-26100.00NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3C3201.8e-1781.25CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7TZT13.1e-1780.00CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3D3W43.1e-1780.00CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3BM262.0e-1677.78CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
Match NameE-valueIdentityDescription
KAA0041988.11.76e-35100.00NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK17924.1 NBS-LRR t... [more]
KAA0040565.11.17e-2281.25CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK05608.1 CACTA en-... [more]
KAA0037426.15.31e-2277.78CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK00217.1 CACTA en-... [more]
TYK18159.17.29e-2280.00CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0048660.11.22e-2180.00CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 17..58

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0022689.2IVF0022689.2mRNA