IVF0022338 (gene) Melon (IVF77) v1

Overview
NameIVF0022338
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionprotein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1
Locationchr06: 2090782 .. 2093131 (+)
RNA-Seq ExpressionIVF0022338
SyntenyIVF0022338
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAGCTCGCGTGTATCCACTCGAAAGTAATAATATCATTCGAAAATGAAGATAGGACAGCCATGGCCACTCCAATCTCAACACTCTCCTTTGCTTCCCTGTAATCACTCTCCCTGTTTGATTCTTCGTCCAATGGTGTCTGAAACTTTCATATGGATATTCTGTTTTATCCCTTCTTTTGATCTTTACTTTCTCTTTCAAAATTCGTCAGTCGTGCTCATGTTTGGGTTTTTTTTTTCAGTTTTTGCCGCTCAGGATTGAGGCGAATCCCAGAATTTCTTCTGCCTTGAACTTCCGTCCCCCGTTTCAGGTTAACATTTCATTGGATTTCTCAACAACACTAACTTACTATTCTTCTCTTTTGCCTCTCACTCTTCGTGTTTTTCTTGTTTACGTTTTCAGGTGGTCGCTAGAAAACAGAGAAATGGTGAAGTTAGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGGTATGATGAATGTGTTCTATTCTTTCTCTTAATTTCTCCCCTACCCTTTTATTGTTTGTTTCTTTTGTCTCCCATTTCACGTCTTTCTGAAACTATAGTCTTGCAATGTTGGGCTAATTCGACCTAGATTCCATTACATGATGCAAAGAGTGAAGCTGTGAAAGGAACTTGGTTTTTTAGGGATAGTTCTTGTATTACAACTGCCTGAAGCATGGGGAGTAGGAATTTCTCTCTTTCTTTCAGCGGCTCTTGTGAGTACAAGCATGCTCCTGCTTCTTGTTGGAGTGCATTACATAATCTTTTTATCATAACATACCATTTCTTTGATTAACCTATATTGGTTGCATTTCATTTGGTAACTTTCCTCTATCATGGCCTCTTGGTTCTCTTTCTATATTTATTTTTCCTTAATATATGGTTGCTTCTATTAAGAGAGAGAGAGATTTTGTTCATGCCTCCTCGTGGTTAGTGTTTGTATTGTATGTAAACTACAGTTTACAACAGAGATGTGTAAACTTTGGAAAAAGGTTATTTGGTCCTTTTGTGACGAATATTGGAGATGTTATGGCTTGTTATAGCATCTTTTTTTTTTTTTATTAATGCAACCCCATGGTTTTTCATTGATAACTATCTAAATGGGGGTGTGTCATTTATGATTCTTCTTTCCAATCGATCAAACTTTGGTGATTGCTGATAATTAGGTGTCACGGTGTGATTCCCGAGTAGGACATTCTTGCCTCTTTGGTCCTGACATTAGGATGCAAGCACTATAGATAGTCAAAAACATTAGAGTATGTGGGGTTCTGGGTTCATTGTAGTATTCAAATCCTACAAGTTTCTTAGTAACATGTTAGATCAGGCAGTTGTCTAGATGAAATTAGGCAAGATGTGTAAAACGGCTCTGATACTTCTTAGAAAAATAATTATATGGAATGCGCACTTAGTGTAGGATTAGGTGGAATAAAGGAAACATTAAGATGATCGATCACCTTCAACCAGACTTTTGCGGATCTCACTATTTGCTATTATTGGGATGCGAATTATGCAATATAATTTAGATGGAAAGGTTTAAATATTGGGAGTTTCTCGAAACAAATAGAATTCTGAGATCGTTCGGGATTATAGGCCACTTTCTGGCAGATCAAAATTTTTTCTTCCAAAATTGAAGAATGAAATCTTTTTTGATATAGAATGACTTTGGGGAGAATTAGTTAAGATCATGTACGGTTATTTTGTGAGTTTGCTATGTTGTTGTTGTTGACATTGAAACTTCTAATTTCATTCCTTATTCAGACAAAGAAGGATGACATGTCGATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAGGGTAAAGGAACAGGGAAAGCTCATCACAATGGACATTGAAAGACTATTATTATCAGAGGACAACCGCTTTGATTTTGTGAATGAGGTTGCAGCTGAGGCCAAGGAATATGTCGAGAGCAACCGCGATGAATATGGGGGTTCCAAGAAAGCCATTCTTCATGTTCTCAGCAACCGTGTGAACGATGCAGGGTTTTATAGGCCAGATGCTTATGCTGAAGATGACCCATTTAAACCGGGACCTCATTATCTGAAACAAGAATTTACTTGAACAATTTGATTACAAAATCCATTTTCTTATACAGACTGTCAATGCATTAATCTGATTTTTCCAGTCTTTAAATGTTAGTGCCTTTGTCTCTTCTGATTAAGAATTGCGCTTGCCTCATGAGTTTTTTTCTAACCAAATATAGCTCTTTAAACTGCTACTTTTCTATTCGTTATGTTTCATCCAACATTCCCAAAAGGAGGGAAGATTATTATCGACAAACTTTTGAAACCATTAGAAAGTTGCTTTTATGAAC

mRNA sequence

GAGAGCTCGCGTGTATCCACTCGAAAGTAATAATATCATTCGAAAATGAAGATAGGACAGCCATGGCCACTCCAATCTCAACACTCTCCTTTGCTTCCCTGTAATCACTCTCCCTGTTTGATTCTTCGTCCAATGTTTTTGCCGCTCAGGATTGAGGCGAATCCCAGAATTTCTTCTGCCTTGAACTTCCGTCCCCCGTTTCAGGTGGTCGCTAGAAAACAGAGAAATGGTGAAGTTAGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGACAAAGAAGGATGACATGTCGATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAGGGTAAAGGAACAGGGAAAGCTCATCACAATGGACATTGAAAGACTATTATTATCAGAGGACAACCGCTTTGATTTTGTGAATGAGGTTGCAGCTGAGGCCAAGGAATATGTCGAGAGCAACCGCGATGAATATGGGGGTTCCAAGAAAGCCATTCTTCATGTTCTCAGCAACCGTGTGAACGATGCAGGGTTTTATAGGCCAGATGCTTATGCTGAAGATGACCCATTTAAACCGGGACCTCATTATCTGAAACAAGAATTTACTTGAACAATTTGATTACAAAATCCATTTTCTTATACAGACTGTCAATGCATTAATCTGATTTTTCCAGTCTTTAAATGTTAGTGCCTTTGTCTCTTCTGATTAAGAATTGCGCTTGCCTCATGAGTTTTTTTCTAACCAAATATAGCTCTTTAAACTGCTACTTTTCTATTCGTTATGTTTCATCCAACATTCCCAAAAGGAGGGAAGATTATTATCGACAAACTTTTGAAACCATTAGAAAGTTGCTTTTATGAAC

Coding sequence (CDS)

ATGAAGATAGGACAGCCATGGCCACTCCAATCTCAACACTCTCCTTTGCTTCCCTGTAATCACTCTCCCTGTTTGATTCTTCGTCCAATGTTTTTGCCGCTCAGGATTGAGGCGAATCCCAGAATTTCTTCTGCCTTGAACTTCCGTCCCCCGTTTCAGGTGGTCGCTAGAAAACAGAGAAATGGTGAAGTTAGTGGTCGGCGAGTGTGGCGACGAAGAAAATTGACAAAGAAGGATGACATGTCGATCTACAAAATGGATCGAATCCCATTCCTTGAAGAACAGGTAAGGAGGGTAAAGGAACAGGGAAAGCTCATCACAATGGACATTGAAAGACTATTATTATCAGAGGACAACCGCTTTGATTTTGTGAATGAGGTTGCAGCTGAGGCCAAGGAATATGTCGAGAGCAACCGCGATGAATATGGGGGTTCCAAGAAAGCCATTCTTCATGTTCTCAGCAACCGTGTGAACGATGCAGGGTTTTATAGGCCAGATGCTTATGCTGAAGATGACCCATTTAAACCGGGACCTCATTATCTGAAACAAGAATTTACTTGA

Protein sequence

MKIGQPWPLQSQHSPLLPCNHSPCLILRPMFLPLRIEANPRISSALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Homology
[Close]
BLAST of IVF0022338 vs. ExPASy Swiss-Prot
Match: Q8VZV9 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana OX=3702 GN=PTAC7 PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 4.5e-47
Identity = 94/140 (67.14%), Postives = 110/140 (78.57%), Query Frame = 0 

Query: 47  NFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLI 106
           N R  FQ         + +GRRVWRRR LTKKDDM  YKM R+PF+EEQVR+++E GK++
Sbjct: 22  NLRCTFQSQVSCGIQRDDNGRRVWRRRTLTKKDDMLRYKMQRVPFVEEQVRKIREVGKVM 81

Query: 107 TMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPD 166
           TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGGSKKAI HVLSNRVND GF RP+
Sbjct: 82  TMDIEQLLLREDNRFEFVNSVAAEATEYVDKNRDEYGGSKKAIFHVLSNRVNDLGFDRPE 141

Query: 167 AYAEDDPFKPGPHYLKQEFT 187
           AY E DP+KPGP YL + +T
Sbjct: 142 AYVEADPYKPGPGYLLEYYT 161

[Close]
BLAST of IVF0022338 vs. ExPASy TrEMBL
Match: A0A5D3CIV3 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001500 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 7.5e-82
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 

Query: 31  FLPLRIEANPRISSALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP 90
           FLPLRIEANPRISSALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP
Sbjct: 672 FLPLRIEANPRISSALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP 731

Query: 91  FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL 150
           FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL
Sbjct: 732 FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL 791

Query: 151 HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 187
           HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 792 HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 827

[Close]
BLAST of IVF0022338 vs. ExPASy TrEMBL
Match: A0A1S4E109 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496049 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 7.5e-82
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0 

Query: 30  MFLPLRIEANPRISSALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRI 89
           MFLPLRIEANPRIS ALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRI
Sbjct: 1   MFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRI 60

Query: 90  PFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAI 149
           PFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAI
Sbjct: 61  PFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAI 120

Query: 150 LHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 187
           LHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 121 LHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 157

[Close]
BLAST of IVF0022338 vs. ExPASy TrEMBL
Match: A0A5A7U3Y9 (KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001660 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.9e-81
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0 

Query: 31  FLPLRIEANPRISSALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP 90
           FLPLRIEANPRIS ALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP
Sbjct: 678 FLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP 737

Query: 91  FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL 150
           FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL
Sbjct: 738 FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL 797

Query: 151 HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 187
           HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 798 HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 833

[Close]
BLAST of IVF0022338 vs. ExPASy TrEMBL
Match: A0A1S3C3E7 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496049 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.9e-81
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0 

Query: 31  FLPLRIEANPRISSALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP 90
           FLPLRIEANPRIS ALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP
Sbjct: 14  FLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP 73

Query: 91  FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL 150
           FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL
Sbjct: 74  FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL 133

Query: 151 HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 187
           HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 134 HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]
BLAST of IVF0022338 vs. ExPASy TrEMBL
Match: A0A0A0L9J8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238200 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 6.0e-79
Identity = 150/155 (96.77%), Postives = 154/155 (99.35%), Query Frame = 0 

Query: 32  LPLRIEANPRISSALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPF 91
           LPLRIEANPRIS ALNFRPPFQ+VARKQ++GEVSGRRVWRRRKLTKKDDMSIYKMDRIPF
Sbjct: 15  LPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTKKDDMSIYKMDRIPF 74

Query: 92  LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILH 151
           LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGG+KKAILH
Sbjct: 75  LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGTKKAILH 134

Query: 152 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 187
           VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 135 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]
BLAST of IVF0022338 vs. NCBI nr
Match: XP_016901917.1 (PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 [Cucumis melo])

HSP 1 Score: 312 bits (799), Expect = 1.33e-106
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0 

Query: 30  MFLPLRIEANPRISSALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRI 89
           MFLPLRIEANPRIS ALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRI
Sbjct: 1   MFLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRI 60

Query: 90  PFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAI 149
           PFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAI
Sbjct: 61  PFLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAI 120

Query: 150 LHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 186
           LHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 121 LHVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 157

[Close]
BLAST of IVF0022338 vs. NCBI nr
Match: XP_008455984.1 (PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 [Cucumis melo])

HSP 1 Score: 310 bits (794), Expect = 1.17e-105
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0 

Query: 31  FLPLRIEANPRISSALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP 90
           FLPLRIEANPRIS ALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP
Sbjct: 14  FLPLRIEANPRISPALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP 73

Query: 91  FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL 150
           FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL
Sbjct: 74  FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL 133

Query: 151 HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 186
           HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 134 HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]
BLAST of IVF0022338 vs. NCBI nr
Match: XP_004146231.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 [Cucumis sativus] >KGN57654.1 hypothetical protein Csa_010112 [Cucumis sativus])

HSP 1 Score: 302 bits (774), Expect = 1.30e-102
Identity = 150/155 (96.77%), Postives = 154/155 (99.35%), Query Frame = 0 

Query: 32  LPLRIEANPRISSALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPF 91
           LPLRIEANPRIS ALNFRPPFQ+VARKQ++GEVSGRRVWRRRKLTKKDDMSIYKMDRIPF
Sbjct: 15  LPLRIEANPRISPALNFRPPFQLVARKQKSGEVSGRRVWRRRKLTKKDDMSIYKMDRIPF 74

Query: 92  LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILH 151
           LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGG+KKAILH
Sbjct: 75  LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGTKKAILH 134

Query: 152 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 186
           VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 135 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 169

[Close]
BLAST of IVF0022338 vs. NCBI nr
Match: TYK11290.1 (KH domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 312 bits (799), Expect = 2.93e-98
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 

Query: 31  FLPLRIEANPRISSALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP 90
           FLPLRIEANPRISSALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP
Sbjct: 672 FLPLRIEANPRISSALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIP 731

Query: 91  FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL 150
           FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL
Sbjct: 732 FLEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAIL 791

Query: 151 HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 186
           HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT
Sbjct: 792 HVLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 827

[Close]
BLAST of IVF0022338 vs. NCBI nr
Match: XP_038891427.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 [Benincasa hispida])

HSP 1 Score: 290 bits (742), Expect = 9.80e-98
Identity = 145/155 (93.55%), Postives = 148/155 (95.48%), Query Frame = 0 

Query: 32  LPLRIEANPRISSALNFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPF 91
           LP RIE  PRIS A NFR PFQVVARKQRNGE SGRRVWRRRKLTKKDDMSIYKMDRIPF
Sbjct: 15  LPHRIEVKPRISPAFNFRSPFQVVARKQRNGEGSGRRVWRRRKLTKKDDMSIYKMDRIPF 74

Query: 92  LEEQVRRVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILH 151
           LEEQVR+VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILH
Sbjct: 75  LEEQVRKVKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILH 134

Query: 152 VLSNRVNDAGFYRPDAYAEDDPFKPGPHYLKQEFT 186
           VLSNRVNDAGFYRPDAYAEDDPFKPGPH+LKQE+T
Sbjct: 135 VLSNRVNDAGFYRPDAYAEDDPFKPGPHFLKQEYT 169

[Close]
BLAST of IVF0022338 vs. TAIR 10
Match: AT5G24314.1 (plastid transcriptionally active7 )

HSP 1 Score: 189.1 bits (479), Expect = 3.2e-48
Identity = 94/140 (67.14%), Postives = 110/140 (78.57%), Query Frame = 0 

Query: 47  NFRPPFQVVARKQRNGEVSGRRVWRRRKLTKKDDMSIYKMDRIPFLEEQVRRVKEQGKLI 106
           N R  FQ         + +GRRVWRRR LTKKDDM  YKM R+PF+EEQVR+++E GK++
Sbjct: 22  NLRCTFQSQVSCGIQRDDNGRRVWRRRTLTKKDDMLRYKMQRVPFVEEQVRKIREVGKVM 81

Query: 107 TMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVNDAGFYRPD 166
           TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGGSKKAI HVLSNRVND GF RP+
Sbjct: 82  TMDIEQLLLREDNRFEFVNSVAAEATEYVDKNRDEYGGSKKAIFHVLSNRVNDLGFDRPE 141

Query: 167 AYAEDDPFKPGPHYLKQEFT 187
           AY E DP+KPGP YL + +T
Sbjct: 142 AYVEADPYKPGPGYLLEYYT 161

[Close]
BLAST of IVF0022338 vs. TAIR 10
Match: AT5G24314.2 (plastid transcriptionally active7 )

HSP 1 Score: 181.8 bits (460), Expect = 5.0e-46
Identity = 94/148 (63.51%), Postives = 110/148 (74.32%), Query Frame = 0 

Query: 47  NFRPPFQVVARKQRNGEVSGRRVWRRRK--------LTKKDDMSIYKMDRIPFLEEQVRR 106
           N R  FQ         + +GRRVWRRR         LTKKDDM  YKM R+PF+EEQVR+
Sbjct: 22  NLRCTFQSQVSCGIQRDDNGRRVWRRRTLVSTKLDILTKKDDMLRYKMQRVPFVEEQVRK 81

Query: 107 VKEQGKLITMDIERLLLSEDNRFDFVNEVAAEAKEYVESNRDEYGGSKKAILHVLSNRVN 166
           ++E GK++TMDIE+LLL EDNRF+FVN VAAEA EYV+ NRDEYGGSKKAI HVLSNRVN
Sbjct: 82  IREVGKVMTMDIEQLLLREDNRFEFVNSVAAEATEYVDKNRDEYGGSKKAIFHVLSNRVN 141

Query: 167 DAGFYRPDAYAEDDPFKPGPHYLKQEFT 187
           D GF RP+AY E DP+KPGP YL + +T
Sbjct: 142 DLGFDRPEAYVEADPYKPGPGYLLEYYT 169

The following BLAST results are available for this feature:
BLAST of IVF0022338 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8VZV94.5e-4767.14Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana OX=3702 GN=PT... [more]
BLAST of IVF0022338 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CIV37.5e-82100.00KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A1S4E1097.5e-8299.36protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 OS=Cucumis melo OX=3656 GN... [more]
A0A5A7U3Y92.9e-8199.36KH domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A1S3C3E72.9e-8199.36protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 OS=Cucumis melo OX=3656 GN... [more]
A0A0A0L9J86.0e-7996.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238200 PE=4 SV=1[more]
BLAST of IVF0022338 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016901917.11.33e-10699.36PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X2 [Cucumis melo][more]
XP_008455984.11.17e-10599.36PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 isoform X1 [Cucumis melo][more]
XP_004146231.11.30e-10296.77protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 [Cucumis sativus] >KGN57654.1 hypothe... [more]
TYK11290.12.93e-98100.00KH domain-containing protein [Cucumis melo var. makuwa][more]
XP_038891427.19.80e-9893.55protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 [Benincasa hispida][more]
BLAST of IVF0022338 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G24314.13.2e-4867.14plastid transcriptionally active7 [more]
AT5G24314.25.0e-4663.51plastid transcriptionally active7 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038958Protein plastid transcriptionally active 7PANTHERPTHR37257PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 7coord: 46..185

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0022338.1IVF0022338.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042793 plastid transcription
cellular_component GO:0000427 plastid-encoded plastid RNA polymerase complex
molecular_function GO:0003723 RNA binding